BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146630.4 + phase: 0
(100 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CIC2_RAT (P54290) Dihydropyridine-sensitive L-type, calcium chan... 30 0.80
CIC2_HUMAN (P54289) Dihydropyridine-sensitive L-type, calcium ch... 30 0.80
TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2) 30 1.0
UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC ... 30 1.4
BCD1_MOUSE (Q8BR07) Cytoskeleton-like bicaudal D protein homolog 1 29 1.8
PER3_HUMAN (P56645) Period circadian protein 3 (hPER3) 29 2.3
COE1_RAT (Q63398) Transcription factor COE1 (OE-1) (O/E-1) (Earl... 29 2.3
COE1_MOUSE (Q07802) Transcription factor COE1 (OE-1) (O/E-1) (Ea... 29 2.3
COE1_HUMAN (Q9UH73) Transcription factor COE1 (OE-1) (O/E-1) (Ea... 29 2.3
ADEN_ADE05 (P03253) Adenain (EC 3.4.22.39) (Endoprotease) (Late ... 29 2.3
ADEN_ADE02 (P03252) Adenain (EC 3.4.22.39) (Endoprotease) (Late ... 29 2.3
YW91_CAEEL (Q22712) Hypothetical protein T24A11.1 in chromosome III 28 3.0
SUZ2_DROME (P25172) Suppressor 2 of zeste protein (Protein poste... 28 3.9
NFT5_MOUSE (Q9WV30) Nuclear factor of activated T cells 5 (T cel... 28 3.9
MSN2_YEAST (P33748) Zinc finger protein MSN2 (Multicopy suppress... 28 3.9
KCN2_MOUSE (P58390) Small conductance calcium-activated potassiu... 28 3.9
ITCH_HUMAN (Q96J02) Itchy homolog E3 ubiquitin protein ligase (E... 28 3.9
IE18_PRVIF (P11675) Immediate-early protein IE180 28 3.9
ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (V... 28 3.9
GLND_STRCO (O69873) [Protein-PII] uridylyltransferase (EC 2.7.7.... 28 3.9
>CIC2_RAT (P54290) Dihydropyridine-sensitive L-type, calcium channel
alpha-2/delta subunits precursor
Length = 1091
Score = 30.4 bits (67), Expect = 0.80
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 68 YVMLSEN-DPKCPKCHSTVLLDFLNAENNNNKK 99
YV+L N PK PK V LDFL+AE N+ K
Sbjct: 519 YVLLHPNLQPKNPKSQEPVTLDFLDAELENDIK 551
>CIC2_HUMAN (P54289) Dihydropyridine-sensitive L-type, calcium
channel alpha-2/delta subunits precursor
Length = 1091
Score = 30.4 bits (67), Expect = 0.80
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 68 YVMLSEN-DPKCPKCHSTVLLDFLNAENNNNKK 99
YV+L N PK PK V LDFL+AE N+ K
Sbjct: 520 YVLLHPNLQPKNPKSQEPVTLDFLDAELENDIK 552
>TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)
Length = 743
Score = 30.0 bits (66), Expect = 1.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 25 RMESSPTRSASVSPPSSCVSSENGS 49
R+E +P+RSAS SPP S V E S
Sbjct: 183 RVERAPSRSASPSPPESLVEEERPS 207
>UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC
3.1.2.15) (Ubiquitin thiolesterase 6) (Ubiquitin-specific
processing protease 6) (Deubiquitinating enzyme 6)
(Proto-oncogene TRE-2)
Length = 1406
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 7 SGPKLDLKLNLSPPRVNRRMESSPTRSASVSPPS--SCVSSENGS--SSP 52
S K D+ L+ SP ++ + SSP S S S S SC SS+N S SSP
Sbjct: 1148 SAGKEDMLLSKSPSSLSANISSSPKGSPSSSRKSGTSCPSSKNSSPNSSP 1197
>BCD1_MOUSE (Q8BR07) Cytoskeleton-like bicaudal D protein homolog 1
Length = 835
Score = 29.3 bits (64), Expect = 1.8
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 4 RNGSGPKLDLKLNLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSPE 53
R+GS D L PR++RR SSP S + S P VS EN +S E
Sbjct: 545 RSGSLKGPDDPRGLLSPRLSRRGVSSPVESRTSSEP---VSKENTETSKE 591
>PER3_HUMAN (P56645) Period circadian protein 3 (hPER3)
Length = 1210
Score = 28.9 bits (63), Expect = 2.3
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 13 LKLNLSPPRVNRRMESSPTRSASVSPPSS--CVSSENGS-SSPEATSMLLVGCP 63
L+LNL + R ES + P + CV+ NGS SSP T L G P
Sbjct: 933 LQLNLLQEEMPRPSESPDRMRRNTCPQTEYQCVTGNNGSESSPATTGALSTGSP 986
>COE1_RAT (Q63398) Transcription factor COE1 (OE-1) (O/E-1) (Early
B-cell factor) (Olfactory neuronal transcription factor)
(Olf-1)
Length = 584
Score = 28.9 bits (63), Expect = 2.3
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 1 MSRRNGSGPKLDLKLNLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSPEATSMLLV 60
MS GS L+ SP + + SSPT ++S S PS+C SS S A + V
Sbjct: 489 MSNLGGSPTFLNGSAANSPYAI---VPSSPTMASSTSLPSNCSSSSGIFSFSPANMVSAV 545
Query: 61 GCPRCLMYVMLSENDPKCPKCHST 84
V+ + P P C ST
Sbjct: 546 KQKSAFAPVVRPQTSPP-PTCTST 568
>COE1_MOUSE (Q07802) Transcription factor COE1 (OE-1) (O/E-1) (Early
B-cell factor)
Length = 591
Score = 28.9 bits (63), Expect = 2.3
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 1 MSRRNGSGPKLDLKLNLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSPEATSMLLV 60
MS GS L+ SP + + SSPT ++S S PS+C SS S A + V
Sbjct: 496 MSNLGGSPTFLNGSAANSPYAI---VPSSPTMASSTSLPSNCSSSSGIFSFSPANMVSAV 552
Query: 61 GCPRCLMYVMLSENDPKCPKCHST 84
V+ + P P C ST
Sbjct: 553 KQKSAFAPVVRPQTSPP-PTCTST 575
>COE1_HUMAN (Q9UH73) Transcription factor COE1 (OE-1) (O/E-1) (Early
B-cell factor)
Length = 591
Score = 28.9 bits (63), Expect = 2.3
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 1 MSRRNGSGPKLDLKLNLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSPEATSMLLV 60
MS GS L+ SP + + SSPT ++S S PS+C SS S A + V
Sbjct: 496 MSNLGGSPTFLNGSAANSPYAI---VPSSPTMASSTSLPSNCSSSSGIFSFSPANMVSAV 552
Query: 61 GCPRCLMYVMLSENDPKCPKCHST 84
V+ + P P C ST
Sbjct: 553 KQKSAFAPVVRPQTSPP-PTCTST 575
>ADEN_ADE05 (P03253) Adenain (EC 3.4.22.39) (Endoprotease) (Late L3
23 kDa protein)
Length = 204
Score = 28.9 bits (63), Expect = 2.3
Identities = 17/60 (28%), Positives = 27/60 (44%), Gaps = 1/60 (1%)
Query: 27 ESSPTRSASVSPPSSCVSSENGSSSPEATSMLLVGCPRCLMYVMLSENDPKCPKCHSTVL 86
ES RSA S P C++ E + S + + G C M++ N P+ P H+ +
Sbjct: 89 ESLLRRSAIASSPDRCITLEKSTQSVQGPNSAACGL-FCCMFLHAFANWPQTPMDHNPTM 147
>ADEN_ADE02 (P03252) Adenain (EC 3.4.22.39) (Endoprotease) (Late L3
23 kDa protein)
Length = 204
Score = 28.9 bits (63), Expect = 2.3
Identities = 17/60 (28%), Positives = 27/60 (44%), Gaps = 1/60 (1%)
Query: 27 ESSPTRSASVSPPSSCVSSENGSSSPEATSMLLVGCPRCLMYVMLSENDPKCPKCHSTVL 86
ES RSA S P C++ E + S + + G C M++ N P+ P H+ +
Sbjct: 89 ESLLRRSAIASSPDRCITLEKSTQSVQGPNSAACGL-FCCMFLHAFANWPQTPMDHNPTM 147
>YW91_CAEEL (Q22712) Hypothetical protein T24A11.1 in chromosome III
Length = 938
Score = 28.5 bits (62), Expect = 3.0
Identities = 19/52 (36%), Positives = 23/52 (43%), Gaps = 2/52 (3%)
Query: 1 MSRRNGSGPKLDLKLNLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSP 52
MS + GP + S +N SPTR + P SC SS N SSP
Sbjct: 871 MSSFDSFGPSSPPASSTSSSSLNMLASMSPTRPQPI--PISCKSSSNSISSP 920
>SUZ2_DROME (P25172) Suppressor 2 of zeste protein (Protein
posterior sex combs)
Length = 1365
Score = 28.1 bits (61), Expect = 3.9
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 33 SASVSPPSSCVSSENGSSSPEATS 56
S + SP SSC SS NGSSS T+
Sbjct: 462 SPNASPMSSCSSSTNGSSSSLGTA 485
>NFT5_MOUSE (Q9WV30) Nuclear factor of activated T cells 5 (T cell
transcription factor NFAT5) (NF-AT5) (Rel
domain-containing transcription factor NFAT5)
Length = 1225
Score = 28.1 bits (61), Expect = 3.9
Identities = 15/47 (31%), Positives = 21/47 (43%)
Query: 11 LDLKLNLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSPEATSM 57
L +L L PPR S T P V + + SS+P ++SM
Sbjct: 31 LPKELQLPPPRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSM 77
>MSN2_YEAST (P33748) Zinc finger protein MSN2 (Multicopy suppressor
of SNF1 protein 2)
Length = 704
Score = 28.1 bits (61), Expect = 3.9
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 9 PKLDLKLNLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSPEATSMLLVGCPRCLMY 68
P D+ N++ P + S P ++ +++PP + S+E S + + PR +
Sbjct: 134 PMNDILYNMNNPLQSPSPSSVP-QNPTINPPINTASNETNLSPQTSNGNETLISPRAQQH 192
Query: 69 VMLSENDPKCPKCHSTVLLDFLNAENNNNK 98
+ +N P ++ L N N N K
Sbjct: 193 TSIKDNRLSLPNGANSNLFIDTNPNNLNEK 222
>KCN2_MOUSE (P58390) Small conductance calcium-activated potassium
channel protein 2 (SK2)
Length = 574
Score = 28.1 bits (61), Expect = 3.9
Identities = 15/52 (28%), Positives = 25/52 (47%), Gaps = 2/52 (3%)
Query: 16 NLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSPEATSMLLVGCPRCLM 67
NLS R R ++ + + + PP+S V G+SSP A + P ++
Sbjct: 16 NLSSSR--RNLQEMDSEAQPLQPPASVVGGGGGASSPSAAAAASSSAPEIVV 65
>ITCH_HUMAN (Q96J02) Itchy homolog E3 ubiquitin protein ligase (EC
6.3.2.-) (Itch) (Atrophin-1-interacting protein 4)
(AIP4) (NFE2-associated polypeptide 1) (NAPP1)
Length = 903
Score = 28.1 bits (61), Expect = 3.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 19 PPRVNRRMESSPTRSASVSPPSSCVSSENGSSS 51
PPR +R +P R ASV+ S S +GSS+
Sbjct: 253 PPRPSRPPPPTPRRPASVNGSPSATSESDGSST 285
>IE18_PRVIF (P11675) Immediate-early protein IE180
Length = 1461
Score = 28.1 bits (61), Expect = 3.9
Identities = 21/62 (33%), Positives = 26/62 (41%)
Query: 2 SRRNGSGPKLDLKLNLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSPEATSMLLVG 61
S GS L + S PR ++ RSAS S SS SS + SS E + G
Sbjct: 357 SSSGGSDSDLSPARSPSAPRAPAAAAAAARRSASSSSSSSSSSSSSSSSEGEEDEGVRPG 416
Query: 62 CP 63
P
Sbjct: 417 AP 418
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0
(VMW118 protein)
Length = 825
Score = 28.1 bits (61), Expect = 3.9
Identities = 15/51 (29%), Positives = 25/51 (48%)
Query: 6 GSGPKLDLKLNLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSPEATS 56
G GP +PP + +++ ++S S SS SS + SSS ++S
Sbjct: 562 GHGPLAPASAGAAPPSASPSSQAAVAAASSSSASSSSASSSSASSSSASSS 612
>GLND_STRCO (O69873) [Protein-PII] uridylyltransferase (EC 2.7.7.59)
(PII uridylyl-transferase) (Uridylyl removing enzyme)
(UTase)
Length = 835
Score = 28.1 bits (61), Expect = 3.9
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 8 GPKLDLKLNLSPPRVNRRMESSPTRSASVSPPSSCVSSENGSSSPEATSM-LLVGCP 63
GP L L+ PP + SSP+ + SP SS SS + + PE + LL+ P
Sbjct: 602 GPVLALRAQTEPPADSAPAPSSPSSPSFPSPLSS-PSSPSSADGPEPLGVELLIAVP 657
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.310 0.125 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,037,803
Number of Sequences: 164201
Number of extensions: 417421
Number of successful extensions: 1576
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1534
Number of HSP's gapped (non-prelim): 71
length of query: 100
length of database: 59,974,054
effective HSP length: 76
effective length of query: 24
effective length of database: 47,494,778
effective search space: 1139874672
effective search space used: 1139874672
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146630.4