BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146569.5 + phase: 0
(211 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YIJ6_YEAST (P40493) Hypothetical 39.4 kDa protein in SGA1-KTR7 i... 52 1e-06
SYA_BACCR (Q817Z0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 33 0.49
SYA_BACC1 (P61697) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 33 0.49
SYA_BACAN (Q81LK0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 33 0.49
FGFF_MOUSE (O35622) Fibroblast growth factor-15 precursor (FGF-15) 31 1.9
NANH_SALTY (P29768) Sialidase (EC 3.2.1.18) (Neuraminidase) (NAN... 30 4.1
>YIJ6_YEAST (P40493) Hypothetical 39.4 kDa protein in SGA1-KTR7
intergenic region
Length = 336
Score = 51.6 bits (122), Expect = 1e-06
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 6 VKHYSSFHNILLVGEGDFSFALCLAKA-FGSAVNMVATSLDDR-GSLAMKYRGAI-RNLI 62
V + ++L GEGDFSFA + + + + N++ TS D+ L +KY N
Sbjct: 65 VMPFEKDETLMLCGEGDFSFARSIVEQNYIESDNLIITSYDNSVNELKLKYPHTFEENYQ 124
Query: 63 ELEGLGCTIMHEVDVHNMNQHHQLKHHNFF-----------------DRIIFNFPHSGFF 105
L+ L I ++DV + + ++ +N + I+FNFPH+G
Sbjct: 125 YLKDLNIPIFFQIDVTKLVKSFKISKNNTWFKIINRLSDHRWGNKPLQNIVFNFPHNGKG 184
Query: 106 QNESDAWVIGEHKKLVSGFLGSAKYMLNV------------------------------- 134
+ + I EH+ L+ F ++ + N+
Sbjct: 185 IKDQER-NIREHQDLIFNFFQNSLQLFNLINTKIQNDTLRYTQGYDLNEDTPQAKKLTAE 243
Query: 135 -GGEIHITHKTAHPFSNWNIKNLAENEKLLFIEEVTFYQHFYPGYGNKK 182
G I ++ P+ +W IK LA+ L F +PGY +++
Sbjct: 244 GYGNIILSLFDGEPYDSWQIKLLAKKNGLTLSRSSKFQWENFPGYHHRR 292
>SYA_BACCR (Q817Z0) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 880
Score = 33.1 bits (74), Expect = 0.49
Identities = 26/97 (26%), Positives = 45/97 (45%), Gaps = 19/97 (19%)
Query: 76 DVHNMNQHHQLKHHNFFDRIIFNFPHSGFFQNESDAWVIGEHKKLVSGFLGSAKYMLNVG 135
D+ N+ + +HH FF+ ++ NF +F+ E+ W FL S K+ +G
Sbjct: 74 DIENVGK--TARHHTFFE-MLGNFSIGDYFKEEAITW--------AWEFLTSDKW---IG 119
Query: 136 GEIHITHKTAHP-----FSNWNIKNLAENEKLLFIEE 167
+ + T HP F+ WN K E+++ +EE
Sbjct: 120 FDKELLSVTIHPEDEEAFTIWNEKMGVPKERIIRLEE 156
>SYA_BACC1 (P61697) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 880
Score = 33.1 bits (74), Expect = 0.49
Identities = 26/97 (26%), Positives = 45/97 (45%), Gaps = 19/97 (19%)
Query: 76 DVHNMNQHHQLKHHNFFDRIIFNFPHSGFFQNESDAWVIGEHKKLVSGFLGSAKYMLNVG 135
D+ N+ + +HH FF+ ++ NF +F+ E+ W FL S K+ +G
Sbjct: 74 DIENVGK--TARHHTFFE-MLGNFSIGDYFKEEAITW--------AWEFLTSDKW---IG 119
Query: 136 GEIHITHKTAHP-----FSNWNIKNLAENEKLLFIEE 167
+ + T HP F+ WN K E+++ +EE
Sbjct: 120 FDKELLSVTIHPEDEEAFTIWNEKMGVPKERIIRLEE 156
>SYA_BACAN (Q81LK0) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 880
Score = 33.1 bits (74), Expect = 0.49
Identities = 26/97 (26%), Positives = 45/97 (45%), Gaps = 19/97 (19%)
Query: 76 DVHNMNQHHQLKHHNFFDRIIFNFPHSGFFQNESDAWVIGEHKKLVSGFLGSAKYMLNVG 135
D+ N+ + +HH FF+ ++ NF +F+ E+ W FL S K+ +G
Sbjct: 74 DIENVGK--TARHHTFFE-MLGNFSIGDYFKEEAITW--------AWEFLTSDKW---IG 119
Query: 136 GEIHITHKTAHP-----FSNWNIKNLAENEKLLFIEE 167
+ + T HP F+ WN K E+++ +EE
Sbjct: 120 FDKELLSVTIHPEDEEAFTIWNEKMGVPKERIIRLEE 156
>FGFF_MOUSE (O35622) Fibroblast growth factor-15 precursor (FGF-15)
Length = 218
Score = 31.2 bits (69), Expect = 1.9
Identities = 15/40 (37%), Positives = 18/40 (44%)
Query: 50 LAMKYRGAIRNLIELEGLGCTIMHEVDVHNMNQHHQLKHH 89
L M G I LI CT E+D NQ+ +KHH
Sbjct: 108 LCMSADGKIYGLIRYSEEDCTFREEMDCLGYNQYRSMKHH 147
>NANH_SALTY (P29768) Sialidase (EC 3.2.1.18) (Neuraminidase)
(NANase) (N-acylneuraminate glycohydrolase) (STNA)
Length = 381
Score = 30.0 bits (66), Expect = 4.1
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 135 GGEIHITHKTAHPFSN-WNIKNLAENEKLLFIEEVTFYQHFYPGYGNKKGAGFKC 188
G ++ H +A +N + +++ L+ EV FYP GN GAG+ C
Sbjct: 289 GNKLVAAHSSAQNKNNDYTRSDISLYAHNLYSGEVKLIDDFYPKVGNASGAGYSC 343
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.324 0.141 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,115,834
Number of Sequences: 164201
Number of extensions: 1147405
Number of successful extensions: 2961
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2958
Number of HSP's gapped (non-prelim): 7
length of query: 211
length of database: 59,974,054
effective HSP length: 105
effective length of query: 106
effective length of database: 42,732,949
effective search space: 4529692594
effective search space used: 4529692594
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)
Medicago: description of AC146569.5