BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146567.15 + phase: 0 /pseudo
         (225 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NU4M_ANOGA (P34852) NADH-ubiquinone oxidoreductase chain 4 (EC 1...    32  1.6
AEC5_ARATH (Q9LFP6) Putative auxin efflux carrier component 5 (A...    31  2.7
NU4M_ANOQU (P33511) NADH-ubiquinone oxidoreductase chain 4 (EC 1...    30  3.5
CIXG_HAEIN (P44458) CitXG protein [Includes: Apo-citrate lyase p...    30  3.5
SYD_COXBU (Q83BE5) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar...    30  6.0
GYRB_STRPN (P48373) DNA gyrase subunit B (EC 5.99.1.3)                 29  7.9

>NU4M_ANOGA (P34852) NADH-ubiquinone oxidoreductase chain 4 (EC
           1.6.5.3)
          Length = 447

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/48 (39%), Positives = 26/48 (53%)

Query: 158 LDSWSWGGMRLAFLYEPLSLTSDSSVASRGGYMTLFVVIFVFLLFYLL 205
           LD  S+G + L+F    L L +   V S   Y  LFV + +FLLF L+
Sbjct: 54  LDMVSYGLILLSFWICGLMLMASEKVFSTNNYEKLFVFMILFLLFMLV 101


>AEC5_ARATH (Q9LFP6) Putative auxin efflux carrier component 5
           (AtPIN5)
          Length = 367

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 25/187 (13%)

Query: 51  LLGIPITGRLLPDKELTCEEGLKIME-----TDLLFTAEA-AGKELTR*GASHISFGA-- 102
           +LG+PI   +  D+  +  E + +++     T LLF  E  A + L   GAS    G   
Sbjct: 120 ILGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARALPSSGASLEHTGNDQ 179

Query: 103 ----LKTRYKELEKEEQ-AQVRLACIKALLLLLLG*TIFLGKNNKNMNLI---------- 147
               ++   KE E EE+ A VR   +  + +LL      +   N    LI          
Sbjct: 180 EEANIEDEPKEEEDEEEVAIVRTRSVGTMKILLKAWRKLIINPNTYATLIGIIWATLHFR 239

Query: 148 --WLLALQDMDELDSWSWGGMRLAFLYEPLSLTSDSSVASRGGYMTLFVVIFVFLLFYLL 205
             W L       +   S GG+ +A     L + S SS+ + G  M +  ++  F+L   L
Sbjct: 240 LGWNLPEMIDKSIHLLSDGGLGMAMFSLGLFMASQSSIIACGTKMAIITMLLKFVLGPAL 299

Query: 206 DRKCLYC 212
                YC
Sbjct: 300 MIASAYC 306


>NU4M_ANOQU (P33511) NADH-ubiquinone oxidoreductase chain 4 (EC
           1.6.5.3)
          Length = 448

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/48 (35%), Positives = 26/48 (53%)

Query: 158 LDSWSWGGMRLAFLYEPLSLTSDSSVASRGGYMTLFVVIFVFLLFYLL 205
           LD  S+G + L+F    L L +   V +   Y  LF+ + +FLLF L+
Sbjct: 54  LDMISYGLILLSFWICGLMLMASEKVFTYNNYKNLFIFMILFLLFMLV 101


>CIXG_HAEIN (P44458) CitXG protein [Includes: Apo-citrate lyase
           phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)
           (Holo-ACP synthase) (Holo-citrate lyase synthase)
           (Apo-ACP nucleodityltransferase);
           2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A syn
          Length = 465

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 138 GKNNKNMNLIWLLALQDMDELDSWSWGGMRLAFLYEPLSLTSDSSVASRGGYMTLFVV 195
           G+     NLI  L L   DE     W    L  L   +++ SD++V  RGG   L+ +
Sbjct: 352 GEAENGFNLIQTL-LPQFDEYHQLEWEHRLLILLLNLMAINSDTNVVHRGGLAGLYFI 408


>SYD_COXBU (Q83BE5) Aspartyl-tRNA synthetase (EC 6.1.1.12)
           (Aspartate--tRNA ligase) (AspRS)
          Length = 590

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 22/71 (30%), Positives = 36/71 (49%), Gaps = 4/71 (5%)

Query: 13  ENISHGFVCAMTGRWH---EETNNFHLPIGEMTIRLDDVVCL-LGIPITGRLLPDKELTC 68
           E++ + +V  +TG+ H   E T N H+P GE+ I   D+  L    P+   +   +E++ 
Sbjct: 61  ESLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSE 120

Query: 69  EEGLKIMETDL 79
           E  LK    DL
Sbjct: 121 EVRLKFRYLDL 131


>GYRB_STRPN (P48373) DNA gyrase subunit B (EC 5.99.1.3)
          Length = 648

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)

Query: 54  IPITGRLLPDKELTCEEGLKIMETDLLFTAEAAGKELTR*GASHISFGALKTRYKELEKE 113
           +PI G++L  ++ + ++ L   E   LFTA   G      GA    F   K RY++L   
Sbjct: 453 LPIRGKILNVEKASMDKILANEEIRSLFTAMGTGF-----GAE---FDVSKARYQKLVLM 504

Query: 114 EQAQVRLACIKALLLLLL 131
             A V  A I+ LLL L+
Sbjct: 505 TDADVDGAHIRTLLLTLI 522


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.328    0.143    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,499,893
Number of Sequences: 164201
Number of extensions: 995666
Number of successful extensions: 2490
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2487
Number of HSP's gapped (non-prelim): 6
length of query: 225
length of database: 59,974,054
effective HSP length: 106
effective length of query: 119
effective length of database: 42,568,748
effective search space: 5065681012
effective search space used: 5065681012
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)