BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146567.1 - phase: 0 
         (178 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NU5M_DROME (P18932) NADH-ubiquinone oxidoreductase chain 5 (EC 1...    32  0.59
RFC_SALTY (P26479) O-antigen polymerase                                32  0.77
AGRB_CLOBE (Q7WYU3) Putative agrB-like protein (EC 3.4.-.-)            31  1.3
NU5M_DROYA (P07706) NADH-ubiquinone oxidoreductase chain 5 (EC 1...    30  2.9
NU1M_NEUCR (P08774) NADH-ubiquinone oxidoreductase chain 1 (EC 1...    30  2.9
Y61B_MYCPN (P75040) Hypothetical protein MG061 homolog 2 (R02_or...    30  3.8
YEA5_RHILO (Q98CU0) Hypothetical UPF0314 protein mll5005               29  6.6
TENS_HUMAN (Q9HBL0) Tensin                                             29  6.6
RFBX_YERPS (Q05347) Putative O-antigen export protein                  29  6.6
KCH_ECOLI (P31069) Putative potassium channel protein                  29  6.6

>NU5M_DROME (P18932) NADH-ubiquinone oxidoreductase chain 5 (EC
           1.6.5.3)
          Length = 572

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 11/109 (10%)

Query: 1   MISMKIGCALLGSLGASYNGVSLINLAISLFALVAIESSSQSLGRTYAF----LLFCSIL 56
           +ISM + C LL           L+N  I       +  +S S+  T+ F    LLF S +
Sbjct: 9   LISMSLSCFLLSLY-------FLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFV 61

Query: 57  LDISWFILFTHEIWNISSDDYAKFFIFSVKLTLAMQIIGFIVRLSSSLL 105
           L IS  ++F  + + ++ +   +F +  +   L+M ++     L S LL
Sbjct: 62  LMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILL 110


>RFC_SALTY (P26479) O-antigen polymerase
          Length = 407

 Score = 32.0 bits (71), Expect = 0.77
 Identities = 16/62 (25%), Positives = 29/62 (45%)

Query: 48  AFLLFCSILLDISWFILFTHEIWNISSDDYAKFFIFSVKLTLAMQIIGFIVRLSSSLLWI 107
           AF+++  +L++   +IL    I+ ++   Y  +F  S+  +L   I  F     S L  I
Sbjct: 112 AFIIYLPVLMEFREYILSPRRIYELTRTGYGIYFYPSLMFSLVASICAFFTYKKSKLFCI 171

Query: 108 QI 109
            I
Sbjct: 172 SI 173


>AGRB_CLOBE (Q7WYU3) Putative agrB-like protein (EC 3.4.-.-)
          Length = 199

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)

Query: 26  LAISLFALVAIESSSQSLG----RTYAFLLFCSILLDISWFILFTHEIWNISSDDYAKFF 81
           + + LF+ + + S+   LG    +TY   L CSIL  +   +LFT     ++++ Y  FF
Sbjct: 55  IPLFLFSFIILNSTRPLLGGIHCKTYYGCLTCSILYFMI-ILLFTRLFPELNTNFYIVFF 113

Query: 82  IFSVKLT 88
           I S+ +T
Sbjct: 114 ILSLAIT 120


>NU5M_DROYA (P07706) NADH-ubiquinone oxidoreductase chain 5 (EC
           1.6.5.3)
          Length = 573

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 11/109 (10%)

Query: 1   MISMKIGCALLGSLGASYNGVSLINLAISLFALVAIESSSQSLGRTYAF----LLFCSIL 56
           +IS+ + C LL           L+N  +       +  +S S+  T+ F    LLF S +
Sbjct: 9   LISISLTCFLLSLY-------YLLNNMVYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFV 61

Query: 57  LDISWFILFTHEIWNISSDDYAKFFIFSVKLTLAMQIIGFIVRLSSSLL 105
           L I+  ++F  + +  S ++  +F +  +   L+M ++     L S LL
Sbjct: 62  LMIASLVIFYSKEYMESDENINRFIMLVLMFVLSMMLLIISPNLVSILL 110


>NU1M_NEUCR (P08774) NADH-ubiquinone oxidoreductase chain 1 (EC
           1.6.5.3)
          Length = 371

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 21/59 (35%), Positives = 32/59 (53%), Gaps = 2/59 (3%)

Query: 56  LLDISWFILFTHEI-WNISSDDYAKFFIFSVKLTLAMQIIGFIVRLSSSLLWIQIYRLG 113
           +LD  +  LF  EI W +S   Y + F  + K  L   + G+I+ L SS++ I I+ LG
Sbjct: 266 ILDFVYSNLFIFEINWMVSERSYTEDFFNNYKSILEGWLYGWIIGLKSSIM-IFIFILG 323


>Y61B_MYCPN (P75040) Hypothetical protein MG061 homolog 2
           (R02_orf469)
          Length = 546

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)

Query: 15  GASYNGVSLINLAISLFA---LVAIESSSQSL--GRTYAFLLFCSILLDISWFILFTHEI 69
           G +Y   S+ ++  S+F     +A  ++S ++  G   A +LF S+LL I+W I++    
Sbjct: 449 GFAYVFYSIFDIITSVFLDAPRIATGNTSANILPGAIAAIVLFVSLLLVINWVIIYLPSS 508

Query: 70  WNISSDD 76
           W  + D+
Sbjct: 509 WIKNGDE 515


>YEA5_RHILO (Q98CU0) Hypothetical UPF0314 protein mll5005
          Length = 199

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 30/97 (30%), Positives = 45/97 (45%), Gaps = 14/97 (14%)

Query: 31  FALVAIESSSQSLGRTYAFLLFCS---ILLDISWFILFTHEIWNISSDDYAKFFIFSVKL 87
           +ALV        +G   AF +       LL+ S FI+  +    IS D Y    I SV  
Sbjct: 81  YALVRFLFPRSPIGLRLAFAVLIEGGWELLENSPFIIDRYRAGTISLDYYGDSIINSVSD 140

Query: 88  TLAMQIIGFIV--RLSSSLLWIQI-----YRLGASYV 117
           TLAM ++GF++  RL    +W+ +     + LG  Y+
Sbjct: 141 TLAM-VLGFVMARRLP---IWVIVSLAILFELGTGYL 173


>TENS_HUMAN (Q9HBL0) Tensin
          Length = 1735

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 19/55 (34%), Positives = 27/55 (48%), Gaps = 6/55 (10%)

Query: 115  SYVDTASRAADFDLRS------SFLSPVTPAVARQISNSNEILGGSIYDPAYYSS 163
            SYV++ +R A    R+      SF +P T A   +I   N  LGGS   P+  S+
Sbjct: 1024 SYVESVARTAVAGPRAQDSEPKSFSAPATQAYGHEIPLRNGTLGGSFVSPSPLST 1078


>RFBX_YERPS (Q05347) Putative O-antigen export protein
          Length = 437

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 59  ISWFILFT-HEIWNISSDDYAKFFIFSVKLTLAMQIIGFIVRLSSSLLWIQIYRLG---- 113
           IS  ILF+ +++  + +D YA F +   KL      + F   LS SL W+     G    
Sbjct: 343 ISLIILFSFYQVVRVWTDTYAMFLMSIGKLKPLWISVPFQAVLSGSLQWVGAVNYGLVGL 402

Query: 114 -----ASYVDTASRAADFDLRSS 131
                AS++ T S    F  RS+
Sbjct: 403 LCGLIASFLITVSWWLPFSFRST 425


>KCH_ECOLI (P31069) Putative potassium channel protein
          Length = 417

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 20  GVSLINLAISLFALVAIESSSQSLGRTYAFLLFCSILLDISWFILFTHEIWNISSDDYAK 79
           G  +  L   L        SS + G  +AF+ F ++L   ++  L+  E +N   +    
Sbjct: 115 GFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALYLSEGFNPRIESLMT 174

Query: 80  FFIFSVKLTLAMQIIGFIVRLSSS 103
            F FS++ T++    G IV +S S
Sbjct: 175 AFYFSIE-TMSTVGYGDIVPVSES 197


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.324    0.137    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,044,583
Number of Sequences: 164201
Number of extensions: 618959
Number of successful extensions: 2108
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2105
Number of HSP's gapped (non-prelim): 12
length of query: 178
length of database: 59,974,054
effective HSP length: 103
effective length of query: 75
effective length of database: 43,061,351
effective search space: 3229601325
effective search space used: 3229601325
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)