BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146566.2 + phase: 2 /partial
(358 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MKR2_HUMAN (Q9H000) Makorin 2 (HSPC070) 249 6e-66
MKR2_MOUSE (Q9ERV1) Makorin 2 248 1e-65
MKR1_MACEU (Q9TT91) Makorin 1 241 2e-63
MKR1_HUMAN (Q9UHC7) Makorin 1 239 1e-62
MKR1_MOUSE (Q9QXP6) Makorin 1 238 2e-62
MKR2_BRARE (Q9DFG8) Makorin 2 231 2e-60
MKR2_SERQU (Q9DD48) Makorin 2 (Zinc finger protein YGHLC3HC4) 230 5e-60
MKR4_HUMAN (Q13434) Makorin 4 (Zinc finger protein 127-Xp) (ZNF1... 228 2e-59
MKR3_HUMAN (Q13064) Makorin 3 (Zinc finger protein 127) 196 8e-50
MKR3_MOUSE (Q60764) Makorin 3 (Zinc finger protein 127) 171 2e-42
SCP3_SCHPO (P41000) Protein scp3 60 1e-08
ZCC6_MOUSE (Q8BYK8) Zinc finger CCCH type domain containing prot... 55 3e-07
ZCC6_HUMAN (P61129) Zinc finger CCCH type domain containing prot... 53 1e-06
YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III 53 1e-06
PE38_NPVAC (P23801) Major immediate early protein (PE-38) 52 3e-06
ZCC8_HUMAN (Q8N5P1) Zinc finger CCCH type domain containing prot... 49 2e-05
ZCC8_MOUSE (Q9JJ48) Zinc finger CCCH type domain containing prot... 47 6e-05
LEE1_YEAST (Q02799) Zinc finger protein LEE1 47 1e-04
CPSD_MOUSE (Q8BQZ5) Cleavage and polyadenylation specificity fac... 44 6e-04
ZCC3_MOUSE (Q8CHP0) Zinc finger CCCH type domain containing prot... 42 0.002
>MKR2_HUMAN (Q9H000) Makorin 2 (HSPC070)
Length = 416
Score = 249 bits (637), Expect = 6e-66
Identities = 132/355 (37%), Positives = 196/355 (55%), Gaps = 37/355 (10%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDW-KAPPNNICTFYQKGVCAYGSRCRYDHVKASRA---- 55
+ C++F HG C +G C FSHD + P+ IC +YQKG CAYG+RCRYDH + S A
Sbjct: 6 ITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHTRPSAAAGGA 65
Query: 56 -------------QSSTPSSSIT-------EHQPLVSESAVLGNTRVTSNGVATA-AEFS 94
S P S +T H+P E L +G+A + S
Sbjct: 66 VGTMAHSVPSPAFHSPHPPSEVTASIVKTNSHEPGKREKRTLVLRDRNLSGMAERKTQPS 125
Query: 95 LFSTPFVL--PSEQAWNQESAQLDFLRED-DVVQSVITSPSELPICSFAAAGNCPRGEQC 151
+ S P P + + LD +R D V++ + +E +C +AAAG C G+ C
Sbjct: 126 MVSNPGSCSDPQPSPEMKPHSYLDAIRSGLDDVEASSSYSNEQQLCPYAAAGECRFGDAC 185
Query: 152 PHVHGDLCPSCGRQCLHPFRPEEREEH----MMSCRNKQKHLEALKRSQEIECSVCLERV 207
++HG++C C Q LHPF PE+R+ H M++ ++ + A + SQ+ CS+C+E +
Sbjct: 186 VYLHGEVCEICRLQVLHPFDPEQRKAHEKICMLTFEHEMEKAFAFQASQDKVCSICMEVI 245
Query: 208 LSKPTAAERKFGLLSECDHPFCVSCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPS 267
L K +A+ER+FG+LS C+H +C+SCIR WR + N +++CP CR +S FV+PS
Sbjct: 246 LEKASASERRFGILSNCNHTYCLSCIRQWRCAKQF----ENPIIKSCPECRVISEFVIPS 301
Query: 268 VIWYATSEEKMEIIDTYKAKLKSIDCKHFDFGEGNCPFGTSCFYKHAYRDGRLEE 322
V W +K E+I+ +K + CK+F+ G+G CPFG+ C Y+HAY DGRL E
Sbjct: 302 VYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDGRLAE 356
>MKR2_MOUSE (Q9ERV1) Makorin 2
Length = 416
Score = 248 bits (634), Expect = 1e-65
Identities = 132/355 (37%), Positives = 186/355 (52%), Gaps = 37/355 (10%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDW-KAPPNNICTFYQKGVCAYGSRCRYDHVKASRAQSST 59
V C++F HG C +G C FSHD + P+ IC +YQKG CAYG+RCRYDH K A
Sbjct: 6 VTCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKPPAAAGGA 65
Query: 60 ------PSSSITEHQPLVSESAVLGNTRVTSNGVATAAEFSLFSTPFVL----------- 102
PS S H P S R SN + +L L
Sbjct: 66 VGPAPNPSPSSGLHSPHPSPDIATSVMRTHSNEPGKREKKTLVLRDRNLTGLAEDKTPPS 125
Query: 103 ----------PSEQAWNQESAQLDFLRED-DVVQSVITSPSELPICSFAAAGNCPRGEQC 151
P + + LD +R D +++ + +E +C +AAAG C G+ C
Sbjct: 126 KVNNPGGCSDPQTSPEMKPHSYLDAIRTGLDDLEASSSYSNEPQLCPYAAAGECRLGDAC 185
Query: 152 PHVHGDLCPSCGRQCLHPFRPEEREEHMMSCRNKQKH----LEALKRSQEIECSVCLERV 207
++HGD+C C Q LHPF PE+R+ H C + +H A + SQ+ CS+C+E +
Sbjct: 186 VYLHGDMCEICRLQVLHPFDPEQRKAHEKMCMSTFEHEMEKAFAFQASQDKVCSICMEVI 245
Query: 208 LSKPTAAERKFGLLSECDHPFCVSCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPS 267
L K +A+ER+FG+LS C H +C+SCIR WR + N +++CP CR +S FV+PS
Sbjct: 246 LEKASASERRFGILSNCSHTYCLSCIRQWRCAKQF----ENPIIKSCPECRVISEFVIPS 301
Query: 268 VIWYATSEEKMEIIDTYKAKLKSIDCKHFDFGEGNCPFGTSCFYKHAYRDGRLEE 322
V W +K E+I+ +K + CK+F+ G+G CPFG+ C Y+HAY DGRL E
Sbjct: 302 VYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDGRLAE 356
>MKR1_MACEU (Q9TT91) Makorin 1
Length = 478
Score = 241 bits (615), Expect = 2e-63
Identities = 130/357 (36%), Positives = 195/357 (54%), Gaps = 31/357 (8%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWKAPPNN-ICTFYQKGVCAYGSRCRYDHVKASR----- 54
V C++F HG C KG +C +SHD + +C +YQ+G CAYG RCRY+H K +
Sbjct: 55 VTCRYFMHGVCKKGNNCRYSHDLSTSQSAMVCRYYQRGCCAYGDRCRYEHTKPLKREEVT 114
Query: 55 -----AQSSTPSSSITEH--QPLVSESAVLGNTRVTSNGVATAA--EFSLFSTPFVLPSE 105
A+S P+SS +PL S + V SN A A E + + FV P +
Sbjct: 115 AANLAAKSDLPASSSLPALVEPLAEVSTGEAES-VNSNFAAAGAGGEDWVNAIEFV-PGQ 172
Query: 106 QAWNQ------ESAQLDFLREDDVVQSVITSPSELPICSFAAAGNCPRGEQCPHVHGDLC 159
+ E+ + E+++ + + +C +AA G C GE C ++HGD C
Sbjct: 173 PYCGRAAPSCTEAPLQGMVIEEELEKQQTNVEMKKQLCPYAAVGECRYGENCVYLHGDAC 232
Query: 160 PSCGRQCLHPFRPEEREEHMMSC-RNKQKHLE---ALKRSQEIECSVCLERVLSKPTAAE 215
CG Q LHP +R +H+ SC +K +E A++RS+++ C +C+E V K +E
Sbjct: 233 DMCGLQVLHPVDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSE 292
Query: 216 RKFGLLSECDHPFCVSCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPSVIWYATSE 275
R+FG+LS C+H +C+ CIR WRS+ + +++CP CR S FV+PS W E
Sbjct: 293 RRFGILSNCNHTYCLKCIRKWRSAKQF----ESKIIKSCPECRITSNFVIPSEYWVEEKE 348
Query: 276 EKMEIIDTYKAKLKSIDCKHFDFGEGNCPFGTSCFYKHAYRDGRLEEVALRHLGAAD 332
EK ++I YK + + C++FD G G+CPFG +CFYKHAY DGR EE + +G ++
Sbjct: 349 EKQKLIQKYKEAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSN 405
>MKR1_HUMAN (Q9UHC7) Makorin 1
Length = 482
Score = 239 bits (609), Expect = 1e-62
Identities = 124/357 (34%), Positives = 196/357 (54%), Gaps = 33/357 (9%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWKAPPNNI-CTFYQKGVCAYGSRCRYDHVKASRAQSST 59
V C++F HG C +G++C +SHD P ++ C ++Q+G C YG RCRY+H K + + +T
Sbjct: 59 VTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKPLKQEEAT 118
Query: 60 PSSSITEHQPLVSES--AVLGNTRVTSNGVATAAEFSLFST------------------P 99
+ T+ S S +++G + G A + S F+T P
Sbjct: 119 ATELTTKSSLAASSSLSSIVGPLVEMNTGEAESRN-SNFATVGAGSEDWVNAIEFVPGQP 177
Query: 100 FVLPSEQAWNQESAQLDFLRED-DVVQSVITSPSELPICSFAAAGNCPRGEQCPHVHGDL 158
+ + + + Q +E+ + Q+ + + +L C +AA G C GE C ++HGD
Sbjct: 178 YCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQL--CPYAAVGECRYGENCVYLHGDS 235
Query: 159 CPSCGRQCLHPFRPEEREEHMMSC-RNKQKHLE---ALKRSQEIECSVCLERVLSKPTAA 214
C CG Q LHP +R +H+ SC +K +E A++RS+++ C +C+E V K +
Sbjct: 236 CDMCGLQLLHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPS 295
Query: 215 ERKFGLLSECDHPFCVSCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPSVIWYATS 274
ER+FG+LS C+H +C+ CIR WRS+ + +++CP CR S FV+PS W
Sbjct: 296 ERRFGILSNCNHTYCLKCIRKWRSAKQF----ESKIIKSCPECRITSNFVIPSEYWVEEK 351
Query: 275 EEKMEIIDTYKAKLKSIDCKHFDFGEGNCPFGTSCFYKHAYRDGRLEEVALRHLGAA 331
EEK ++I YK + + C++FD G G+CPFG +CFYKHAY DGR EE + +G +
Sbjct: 352 EEKQKLILKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTS 408
>MKR1_MOUSE (Q9QXP6) Makorin 1
Length = 481
Score = 238 bits (606), Expect = 2e-62
Identities = 125/356 (35%), Positives = 191/356 (53%), Gaps = 31/356 (8%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWKAPPNNI-CTFYQKGVCAYGSRCRYDH---------- 49
V C++F HG C +G++C +SHD P + C ++Q+G C YG RCRY+H
Sbjct: 59 VTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKPLKQEEVT 118
Query: 50 -----VKASRAQSSTPSSSITEHQPLVSESAVLGNTRVTSNGVAT-----AAEFSLFSTP 99
K S A SS+ SS + + S A N + G + A EF + P
Sbjct: 119 ATDLSAKPSLAASSSLSSGVGSLAEMNSGEAESRNPSFPTVGAGSEDWVNAIEF-VPGQP 177
Query: 100 FVLPSEQAWNQESAQLDFLREDDVVQSVITSPSELPICSFAAAGNCPRGEQCPHVHGDLC 159
+ + + + Q +E+ + T ++ +C +AA G C GE C ++HGD C
Sbjct: 178 YCGRTAPSCTEVPPQGSVTKEESEKEPT-TVETKKQLCPYAAVGECRYGENCVYLHGDSC 236
Query: 160 PSCGRQCLHPFRPEEREEHMMSC-RNKQKHLE---ALKRSQEIECSVCLERVLSKPTAAE 215
CG Q LHP +R +H+ SC +K +E A++R++++ C +C+E V K +E
Sbjct: 237 DMCGLQVLHPVDAAQRSQHIKSCIEAHEKDMELSFAVQRTKDMVCGICMEVVYEKANPSE 296
Query: 216 RKFGLLSECDHPFCVSCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPSVIWYATSE 275
R+FG+LS C+H +C+ CIR WRS+ + +++CP CR S FV+PS W E
Sbjct: 297 RRFGILSNCNHTYCLKCIRKWRSAKQF----ESKIIKSCPECRITSNFVIPSEYWVEEKE 352
Query: 276 EKMEIIDTYKAKLKSIDCKHFDFGEGNCPFGTSCFYKHAYRDGRLEEVALRHLGAA 331
EK ++I YK + + C++FD G G+CPFG +CFYKHAY DGR EE + +G +
Sbjct: 353 EKQKLIQKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTS 408
>MKR2_BRARE (Q9DFG8) Makorin 2
Length = 414
Score = 231 bits (590), Expect = 2e-60
Identities = 124/355 (34%), Positives = 181/355 (50%), Gaps = 38/355 (10%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWK-APPNNICTFYQKGVCAYGSRCRYDHVK-------- 51
V C++F HG C +G C FSHD + P+ IC +YQ+G CAYG RCRYDH+K
Sbjct: 6 VTCRYFLHGVCREGSRCLFSHDLTTSKPSTICKYYQRGACAYGDRCRYDHIKPPGRGSGA 65
Query: 52 ----ASRAQSSTPSSSITEHQPLVSESAVLGNTRVTSNGVATAAEFSLFSTPFVLPSEQA 107
++R+ SS +S+ P + + + + + + +FS SE
Sbjct: 66 PADHSNRSSSSAGASAPGPGPPANTSKHLKKPLVLRDKALCSDSRPRVFSAESSELSE-C 124
Query: 108 WNQES-------AQLDFLRED-DVVQSVITSPSELP--------ICSFAAAGNCPRGEQC 151
W Q + L+ +R D + + P IC F AAG C GE C
Sbjct: 125 WEQRDDGAQKPHSYLEAIRSGLDASAAAAATAGTFPELQQTSPQICPFLAAGQCQYGESC 184
Query: 152 PHVHGDLCPSCGRQCLHPFRPEEREEHMMSC----RNKQKHLEALKRSQEIECSVCLERV 207
P++HG++C C + LHP PE+R H C + A+++SQ+ C +CL+ V
Sbjct: 185 PYLHGEMCEICRQHVLHPHDPEQRAAHEKKCMVAFEMDMERAFAVQQSQDKVCKICLDVV 244
Query: 208 LSKPTAAERKFGLLSECDHPFCVSCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPS 267
K + +ER+FG+LS C H +C++CIR WR N ++CP CR +S FV+PS
Sbjct: 245 YEKSSPSERRFGILSSCAHTYCLNCIRQWRCVEQLH----NQIRKSCPECRVVSEFVIPS 300
Query: 268 VIWYATSEEKMEIIDTYKAKLKSIDCKHFDFGEGNCPFGTSCFYKHAYRDGRLEE 322
+ W E+K +I+ +K+ + CK+FD G G CPFG CFY HAY DGR E
Sbjct: 301 IYWVEDQEQKNLLIEEFKSGVSKKACKYFDQGRGTCPFGGKCFYMHAYADGRRAE 355
>MKR2_SERQU (Q9DD48) Makorin 2 (Zinc finger protein YGHLC3HC4)
Length = 423
Score = 230 bits (586), Expect = 5e-60
Identities = 134/375 (35%), Positives = 187/375 (49%), Gaps = 39/375 (10%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWK-APPNNICTFYQKGVCAYGSRCRYDHVKASR----- 54
V C++F HG C +G C FSHD + P+ IC FYQ+GVCAYG RCRYDH+K S
Sbjct: 6 VTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCRYDHIKPSSRGGGG 65
Query: 55 --------------------AQSSTPSSSITEHQPLVSESAVLGNTRVTSNGVATAAEFS 94
PS + LV VLG RV A A S
Sbjct: 66 GAPEDQAGGGGAGGGGAGIGGAGGGPSVRGGMKKNLVLRDRVLGVDRVDRMFGAPAD--S 123
Query: 95 LFSTPFVLPSEQAWNQE-SAQLDFLREDDVVQSVITSPSELP-ICSFAAAGNCPRGEQCP 152
++S + ++ + LD +D V LP +C +AA G+C E C
Sbjct: 124 MWSDVSTAAAPHSYVEAIRTGLDASAQDQATPPVCGPSQNLPQLCPYAANGHCFYEENCT 183
Query: 153 HVHGDLCPSCGRQCLHPFRPEEREEHMMSC----RNKQKHLEALKRSQEIECSVCLERVL 208
++HGDLC CG Q LHP E+R H C + A + SQ+ CS+C+E V+
Sbjct: 184 YLHGDLCEVCGLQVLHPHDSEQRRAHEKMCLAAFEADMEKAFAAQLSQDKVCSICMEVVV 243
Query: 209 SKPTAAERKFGLLSECDHPFCVSCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPSV 268
K ++R+FG+LS C H FC++CIR WR + N+ +++CP CR +S FV+PSV
Sbjct: 244 QKANPSDRRFGILSSCCHTFCLACIRKWRCTRTFS----NTIIKSCPECRVVSEFVIPSV 299
Query: 269 IWYATSEEKMEIIDTYKAKLKSIDCKHFDFGEGNCPFGTSCFYKHAYRDG-RLEEVALRH 327
W E+K +ID +K+ + CK+FD G G+CPFG C Y HA+ DG R E R
Sbjct: 300 YWVEDQEDKDHLIDLFKSGVSKKACKYFDQGRGSCPFGGKCLYLHAFPDGTRAEPDRPRK 359
Query: 328 LGAADGDTIIAKDIR 342
+++G+ +R
Sbjct: 360 QLSSEGNVRFMNSVR 374
>MKR4_HUMAN (Q13434) Makorin 4 (Zinc finger protein 127-Xp)
(ZNF127-Xp)
Length = 485
Score = 228 bits (580), Expect = 2e-59
Identities = 124/360 (34%), Positives = 186/360 (51%), Gaps = 39/360 (10%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWKAPPNNI-CTFYQKGVCAYGSRCRYDHVKASRAQSST 59
V C++F +G C +G++C +SHD + C ++Q+G C YG RCR +H K + + +T
Sbjct: 94 VTCRYFKYGICKEGDNCRYSHDLSDRLCGVVCKYFQRGCCVYGDRCRCEHSKPLKQEEAT 153
Query: 60 PSSSITEHQPLVSES--AVLGNTRVTSNGVATAAEFSLFSTPFVLPSEQAWNQESAQLDF 117
+ T+ S S +++G V N + S F+T V+ + W + ++F
Sbjct: 154 ATELTTKSSLAASSSLSSIVGPL-VEMNTNEAESRNSNFAT--VVAGSEDW---ANAIEF 207
Query: 118 LREDDVVQSVITSPSELPI----------------------CSFAAAGNCPRGEQCPHVH 155
+ + S +E P+ C +AA G C GE C ++H
Sbjct: 208 VPGQPYCGRTVPSCTEAPLQGSVTKEESEEEQTAVETKKQLCPYAAVGQCRYGENCVYLH 267
Query: 156 GDLCPSCGRQCLHPFRPEEREEHMMSC-RNKQKHLE---ALKRSQEIECSVCLERVLSKP 211
GDLC CG Q LHP +R +H+ +C +K +E A++RS++ C +C+E V K
Sbjct: 268 GDLCDMCGLQVLHPMDAAQRSQHIQACIEAHEKDMEFSFAVQRSKDKVCGICMEVVYEKA 327
Query: 212 TAAERKFGLLSECDHPFCVSCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPSVIWY 271
E +FG+LS C+H FC+ CIR WRS+ V S CP CR S FV+PS W
Sbjct: 328 NPNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKS----CPQCRITSNFVIPSEYWV 383
Query: 272 ATSEEKMEIIDTYKAKLKSIDCKHFDFGEGNCPFGTSCFYKHAYRDGRLEEVALRHLGAA 331
EEK ++I YK + + CK+FD G G+CPFG +CFYKH Y DGR EE + +G +
Sbjct: 384 EEKEEKQKLIQKYKEAMSNKACKYFDEGRGSCPFGENCFYKHMYPDGRREEPQRQQVGTS 443
>MKR3_HUMAN (Q13064) Makorin 3 (Zinc finger protein 127)
Length = 507
Score = 196 bits (498), Expect = 8e-50
Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 21/333 (6%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWKAPPNNICT---FYQKGVCAYGSRCRYDHVKASRAQ- 56
++C+++ HG C +GE+C +SHD + T G A G H++ +
Sbjct: 99 IICRYYIHGQCKEGENCRYSHDLSG--RKMATEGGVSPPGASAGGGPSTAAHIEPPTQEV 156
Query: 57 SSTPSSSITEHQPLVSESAVLGNTRV----TSNGVATAAEFSLFSTPFVLPSEQAWNQE- 111
+ P ++ + P++ +A G G A A ++ Q +
Sbjct: 157 AEAPPAASSLSLPVIGSAAERGFFEAERDNADRGAAGGAGVESWADAIEFVPGQPYRGRW 216
Query: 112 --SAQLDFLREDDVVQSVITSPSELPICSFAAAGNCPRGEQCPHVHGDLCPSCGRQCLHP 169
SA L+ + + + S L C +A+ G C RGE C ++HGD+C CG Q LHP
Sbjct: 217 VASAPEAPLQSSETERKQMAVGSGLRFCYYASRGVCFRGESCMYLHGDICDMCGLQTLHP 276
Query: 170 FRPEEREEHMMSC-RNKQKHLE---ALKRSQEIECSVCLERVLSKPTAAERKFGLLSECD 225
+REEHM +C +K +E A++R + C +C+E V K +R+FG+LS C+
Sbjct: 277 MDAAQREEHMRACIEAHEKDMELSFAVQRGMDKVCGICMEVVYEKANPNDRRFGILSNCN 336
Query: 226 HPFCVSCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPSVIWYATSEEKMEIIDTYK 285
H FC+ CIR WRS+ N +++CP CR S V+PS W EEK ++I YK
Sbjct: 337 HSFCIRCIRRWRSARQF----ENRIVKSCPQCRVTSELVIPSEFWVEEEEEKQKLIQQYK 392
Query: 286 AKLKSIDCKHFDFGEGNCPFGTSCFYKHAYRDG 318
+ + C++F G GNCPFG +CFYKH Y +G
Sbjct: 393 EAMSNKACRYFAEGRGNCPFGDTCFYKHEYPEG 425
>MKR3_MOUSE (Q60764) Makorin 3 (Zinc finger protein 127)
Length = 544
Score = 171 bits (434), Expect = 2e-42
Identities = 101/376 (26%), Positives = 167/376 (43%), Gaps = 68/376 (18%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDHVKASRAQSSTP 60
+LC+++ HG C +G++C +SHD + +G R D + P
Sbjct: 96 ILCRYYLHGQCKEGDNCRYSHDLSGRRRS------RGGQDAQPRASADRGPKMATRWEPP 149
Query: 61 SSSITEHQPLVSESAV----------LGNTRVTSNGVATAAE----------FSLFSTPF 100
+ + E P S S++ + + G+ +AAE SL +
Sbjct: 150 TQEVVEAPPAASSSSLPLIGSAAERGFTEAEIDNAGIRSAAERGFSEAEIDNASLAAGAA 209
Query: 101 VLPSEQAWN---------------------QESAQLDFLREDDVVQSV-----ITSPSEL 134
+ W + Q + + + + + P +
Sbjct: 210 AGAGAEGWEGAIEFVPGQPYRGRVVPPHGPEAPLQSPAIEREHMAMGMGMPMPVPMPMPV 269
Query: 135 P--------ICSFAAAGNCPRGEQCPHVHGDLCPSCGRQCLHPFRPEEREEHMMSC-RNK 185
P +C +AA G C RG++C + HG++C CG+Q LHP+ ++E H +C
Sbjct: 270 PMPVPMPLPLCRYAARGQCLRGDRCAYPHGEICDMCGQQALHPWDAAQQEAHRRACVEAH 329
Query: 186 QKHLE---ALKRSQEIECSVCLERVLSKPTAAERKFGLLSECDHPFCVSCIRNWRSSNPT 242
++ +E A++RS + C +C+E V K +R+FG+L C+H +C+ CIR WRS+
Sbjct: 330 ERDMELSFAVQRSMDKVCGICMEVVYEKADPTDRRFGILFSCNHTYCLRCIRRWRSAT-- 387
Query: 243 LGMDVNSTLRACPICRKLSYFVVPSVIWYATSEEKMEIIDTYKAKLKSIDCKHFDFGEGN 302
N ++CP CR S FV+PS W EEK +++ YK + C++F G G+
Sbjct: 388 --QFENRISKSCPQCRVSSGFVIPSEFWVEEEEEKEKLVQQYKEGMSQKACRYFAGGLGH 445
Query: 303 CPFGTSCFYKHAYRDG 318
CPFG CFYKH Y +G
Sbjct: 446 CPFGEFCFYKHEYPEG 461
>SCP3_SCHPO (P41000) Protein scp3
Length = 583
Score = 59.7 bits (143), Expect = 1e-08
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWK-APPNNICTFYQKGVCAYGSRCRYDHV--------K 51
V CKFF G C G++C FSHD + A IC ++QKG C +GS+C +HV
Sbjct: 39 VPCKFFRQGTCTSGKNCIFSHDLELATEKTICKYFQKGNCKFGSKCALEHVLPDGRKVKT 98
Query: 52 ASRAQSSTPSSSITEHQPLVSESAVLGNT----RVTSNGVATAAE 92
+ A S+T S +++ + ++ N +T+ ATA+E
Sbjct: 99 RAFAPSTTAMGSSSQNISAAPMANIISNNDKILPMTTMASATASE 143
Score = 32.3 bits (72), Expect = 1.9
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 293 CKHFDFGEGNCPFGTSCFYKHAYRDGR 319
CK+F +GNC FG+ C +H DGR
Sbjct: 70 CKYFQ--KGNCKFGSKCALEHVLPDGR 94
>ZCC6_MOUSE (Q8BYK8) Zinc finger CCCH type domain containing protein
6
Length = 1177
Score = 55.1 bits (131), Expect = 3e-07
Identities = 20/49 (40%), Positives = 30/49 (60%), Gaps = 1/49 (2%)
Query: 2 LCKFFAHGACLKGEHCEFSHDWK-APPNNICTFYQKGVCAYGSRCRYDH 49
+CK+F G C+KG+HC+F+HD + +C +Y +G C G C Y H
Sbjct: 275 ICKYFLEGRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMH 323
Score = 30.8 bits (68), Expect = 5.5
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Query: 3 CKFFAHGA-CLKGEHCEFSHD 22
CKF+ GA C +G+ C+FSHD
Sbjct: 328 CKFYHSGAKCYQGDKCKFSHD 348
>ZCC6_HUMAN (P61129) Zinc finger CCCH type domain containing protein
6
Length = 1189
Score = 53.1 bits (126), Expect = 1e-06
Identities = 21/49 (42%), Positives = 28/49 (56%), Gaps = 1/49 (2%)
Query: 2 LCKFFAHGACLKGEHCEFSHDWKAPP-NNICTFYQKGVCAYGSRCRYDH 49
+CK+F G C+KG+ C+F HD + IC FY +G C G C Y H
Sbjct: 277 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH 325
Score = 43.9 bits (102), Expect = 6e-04
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 2 LCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGV-CAYGSRCRYDHVKASRAQSSTP 60
+CKF+ G C KGE+C + H+ + P C FY G C G C++ H ++
Sbjct: 306 ICKFYLQGYCTKGENCIYMHN-EFP----CKFYHSGAKCYQGDNCKFSHDDLTKETKKLL 360
Query: 61 SSSITEHQPLVSE 73
+ + L++E
Sbjct: 361 DKVLNTDEELINE 373
>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III
Length = 547
Score = 52.8 bits (125), Expect = 1e-06
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDHVKASRAQSSTP 60
V CKFF +G C GE+C FSH + IC ++ KG C +G +C H A ++ P
Sbjct: 45 VPCKFFRNGTCTAGENCPFSHSLET-ERPICKYFLKGNCKFGPKCALSH--ALPGNTNLP 101
Query: 61 SSSITEHQPLVSESAVLGNTRVTSNGV-ATAAEFSLFSTPFVLPSEQAWNQESAQLDFLR 119
+ + T + S +A G + V S + A SL S P+++A N +
Sbjct: 102 NGTST--NTMASMAANGGASSVASKQMGANQISPSLSSKTMKNPADKANNTTAT------ 153
Query: 120 EDDVVQSVITSP 131
DV + TSP
Sbjct: 154 --DVRGNTATSP 163
>PE38_NPVAC (P23801) Major immediate early protein (PE-38)
Length = 321
Score = 51.6 bits (122), Expect = 3e-06
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 171 RPEEREEHMMSCRNKQKHLEALKRSQEI-----ECSVCLERVLSKPTAAERKFGLLSECD 225
R +R+ + S + +Q+ + A ++ + ECSVCLE S+ + F + + CD
Sbjct: 52 RRRQRQNQLRSIQMEQQRMMAELNNEPVINFKFECSVCLE-TYSQQSNDTCPFLIPTTCD 110
Query: 226 HPFCVSCIRNWRSSNPTLGMDVNSTLRACPIC-------RKLSYFVVPSVIWYATSEEKM 278
H FC C+ N +S+ M++ + CP+C R L V + +Y ++E++
Sbjct: 111 HGFCFKCVINLQSN----AMNIPHSTVCCPLCNTQVKMWRSLKPNAVVTCKFYKKTQERV 166
Query: 279 EIIDTYKAKLKSIDCK---HFDFGEGNCPFGTSCFYKHAYRDGRLEE 322
+ YK +K + + + + NC K A + LEE
Sbjct: 167 PPVQQYKNIIKVLQERSVISVEDNDNNCDINMENQAKIAALEAELEE 213
>ZCC8_HUMAN (Q8N5P1) Zinc finger CCCH type domain containing protein
8
Length = 291
Score = 48.9 bits (115), Expect = 2e-05
Identities = 19/49 (38%), Positives = 27/49 (54%), Gaps = 1/49 (2%)
Query: 2 LCKFFAHGACLKGEHCEFSHDWK-APPNNICTFYQKGVCAYGSRCRYDH 49
+CK+F C+KG+ C+F HD + +C FY +G C G C Y H
Sbjct: 196 ICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLH 244
Score = 40.0 bits (92), Expect = 0.009
Identities = 17/49 (34%), Positives = 25/49 (50%), Gaps = 6/49 (12%)
Query: 2 LCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGV-CAYGSRCRYDH 49
+CKF+ G C +GE+C + H+ C FY G C G C++ H
Sbjct: 225 MCKFYVQGYCTRGENCLYLHN-----EYPCKFYHTGTKCYQGEYCKFSH 268
>ZCC8_MOUSE (Q9JJ48) Zinc finger CCCH type domain containing protein
8 (Fetal liver zinc finger protein 1)
Length = 305
Score = 47.4 bits (111), Expect = 6e-05
Identities = 18/49 (36%), Positives = 27/49 (54%), Gaps = 1/49 (2%)
Query: 2 LCKFFAHGACLKGEHCEFSHDWK-APPNNICTFYQKGVCAYGSRCRYDH 49
+CK+F C+KG+ C+F HD + +C +Y +G C G C Y H
Sbjct: 210 VCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLH 258
>LEE1_YEAST (Q02799) Zinc finger protein LEE1
Length = 301
Score = 46.6 bits (109), Expect = 1e-04
Identities = 38/138 (27%), Positives = 64/138 (45%), Gaps = 17/138 (12%)
Query: 1 VLCKFFAHGACLKGEHCEFSH--DWKAPPNNI-CTFYQKGVCAYGSRCRYDHVKASR-AQ 56
V CKFF G C G C FSH D + NN+ C ++ KG C +G++C HV +
Sbjct: 91 VPCKFFKMGNCQAGSSCPFSHSPDIISSANNLPCKYFAKGNCKFGNKCVNAHVLPNGFKM 150
Query: 57 SSTPSSSITEHQPLVSESAVLGNTRVTSNGVATAAEFSLFSTPFVLPSEQAWNQESAQLD 116
+S IT S++ L + R +A FS +++P L ++ ++ ++ +
Sbjct: 151 NSKEPIDITP----PSQNNYLSHAR--------SASFSTYTSP-PLSAQTEFSHSASNAN 197
Query: 117 FLREDDVVQSVITSPSEL 134
+ ++ S SP L
Sbjct: 198 YFSSQYLMYSPQKSPEAL 215
>CPSD_MOUSE (Q8BQZ5) Cleavage and polyadenylation specificity
factor, 30 kDa subunit (CPSF 30 kDa subunit) (Clipper
homolog) (Clipper/CPSF 30K)
Length = 211
Score = 43.9 bits (102), Expect = 6e-04
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 1 VLCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDHVK 51
V+CK + G C KG+ CEF H++ C FY K +G CR+ H +
Sbjct: 66 VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSK----FGPLCRHRHTR 112
Score = 37.7 bits (86), Expect = 0.045
Identities = 16/48 (33%), Positives = 24/48 (49%), Gaps = 1/48 (2%)
Query: 2 LCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDH 49
+C+FF AC KG C F H +C + +G+C G +C + H
Sbjct: 40 VCEFFLKAACGKGGMCPFRH-ISGEKTVVCKHWLRGLCKKGDQCEFLH 86
>ZCC3_MOUSE (Q8CHP0) Zinc finger CCCH type domain containing protein
3
Length = 950
Score = 42.4 bits (98), Expect = 0.002
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 2 LCKFFAHGACLKGE-HCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDHVKASR 54
+C F G C K + C FSH +C+++ KG+C+ S C Y HV SR
Sbjct: 694 VCTRFVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGICS-NSNCPYSHVYVSR 746
Score = 38.9 bits (89), Expect = 0.020
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 2 LCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDH 49
+C +F G C +C +SH + + +C+ + KG C G++C+ H
Sbjct: 723 VCSYFLKGIC-SNSNCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKH 769
Score = 34.3 bits (77), Expect = 0.50
Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 17/103 (16%)
Query: 2 LCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDHVKASR------- 54
+C F G C G C+ H P F ++G+C GS+C+ H R
Sbjct: 750 VCSDFLKGYCPLGAKCKKKHTLLCPD-----FARRGICPRGSQCQLLHRNQKRHGRRTAA 804
Query: 55 -----AQSSTPSSSITEHQPLVSESAVLGNTRVTSNGVATAAE 92
P S + L + + R S+G+A+ AE
Sbjct: 805 PPIPGPSDGAPRSKASAGHVLRKPTTTQRSVRQMSSGLASGAE 847
Score = 31.6 bits (70), Expect = 3.2
Identities = 17/53 (32%), Positives = 26/53 (48%), Gaps = 4/53 (7%)
Query: 136 ICSFAAAGNCPRGEQCPHVHGDLCPSCGRQCLHPFRPEEREEHMMSCRNKQKH 188
+CS G CP G +C H LCP R+ + P + + H RN+++H
Sbjct: 750 VCSDFLKGYCPLGAKCKKKHTLLCPDFARRGICPRGSQCQLLH----RNQKRH 798
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.135 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,205,469
Number of Sequences: 164201
Number of extensions: 1813515
Number of successful extensions: 5315
Number of sequences better than 10.0: 140
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 4973
Number of HSP's gapped (non-prelim): 307
length of query: 358
length of database: 59,974,054
effective HSP length: 111
effective length of query: 247
effective length of database: 41,747,743
effective search space: 10311692521
effective search space used: 10311692521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)
Medicago: description of AC146566.2