BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146565.7 + phase: 0 /pseudo
         (508 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YM38_YEAST (Q03825) Hypothetical 85.0 kDa protein in HLJ1-SMP2 i...    42  0.005
SSB_SHEHA (P77953) Single-strand binding protein (SSB) (Helix-de...    42  0.005
FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK                               42  0.005
SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) ...    40  0.019
EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...    40  0.019
SN3A_MOUSE (Q60520) Paired amphipathic helix protein Sin3a             39  0.024
FTSK_ECO57 (Q8X5H9) DNA translocase ftsK                               39  0.024
GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor (P...    39  0.032
FTSK_SHIFL (Q83S00) DNA translocase ftsK                               39  0.032
FTSK_ECOLI (P46889) DNA translocase ftsK                               38  0.054
HOG3_HORVU (P80198) Gamma-hordein 3                                    38  0.071
SSB_SHEON (Q8EA81) Single-strand binding protein (SSB) (Helix-de...    37  0.092
KAPC_DICDI (P34099) cAMP-dependent protein kinase catalytic subu...    37  0.092
EXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precur...    37  0.092
BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...    37  0.12
Z261_HUMAN (Q14202) Zinc finger protein 261 (DXS6673E protein)         37  0.16
WAS1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family memb...    37  0.16
VP40_SHV21 (Q01002) Capsid protein P40 [Contains: Capsid protein...    36  0.21
UREA_CRYNV (O13465) Urease (EC 3.5.1.5) (Urea amidohydrolase)          36  0.21
KCN3_RAT (P70605) Small conductance calcium-activated potassium ...    36  0.21

>YM38_YEAST (Q03825) Hypothetical 85.0 kDa protein in HLJ1-SMP2
           intergenic region
          Length = 758

 Score = 41.6 bits (96), Expect = 0.005
 Identities = 28/80 (35%), Positives = 34/80 (42%)

Query: 378 QQNYPAYQHVAAITPATNAIQQPGYQPQFQQYPQQLYQQQQPRPQAQRTQFDPIPMKYAD 437
           QQ     QH     P     QQ   Q Q QQ  QQ  QQQQ + Q Q+ Q  P P+    
Sbjct: 279 QQQIQQPQHQPQHQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQTPYPIVNPQ 338

Query: 438 FLPALLEKNLVHTRPPPKVP 457
            +P +  +N   T   P VP
Sbjct: 339 MVPHIPSENSHSTGLMPSVP 358


>SSB_SHEHA (P77953) Single-strand binding protein (SSB)
           (Helix-destabilizing protein)
          Length = 226

 Score = 41.6 bits (96), Expect = 0.005
 Identities = 33/101 (32%), Positives = 44/101 (42%), Gaps = 7/101 (6%)

Query: 346 KDGASDSGAKKFGNNFPRKKAPEVGMVAHGRPQQNYPAYQHVAAITPATNAIQQPGYQPQ 405
           + G  D G ++   N P+++AP+ G     +     PAY       P   A QQ GYQ Q
Sbjct: 119 QQGGGDYGQQQNQYNAPQQQAPQQGYAPKPQSAPQQPAYAPKPQSAPQQPAQQQGGYQSQ 178

Query: 406 FQQYPQQLYQQQQPRPQAQRTQFD-PIPMKYA---DFLPAL 442
            QQ     Y    P+PQA   Q   P P + A   +F P L
Sbjct: 179 GQQPQAPAY---APKPQAAPQQRPAPAPQQAAPQQNFTPDL 216


>FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK
          Length = 1347

 Score = 41.6 bits (96), Expect = 0.005
 Identities = 57/221 (25%), Positives = 89/221 (39%), Gaps = 19/221 (8%)

Query: 252 EQYNYNVDMAPDRSDL-QAMTQGDKETFKEYAQRWRDIAAQVSPRIEEKEMTKIFLKTLN 310
           +QYN +   A  + +L +   Q  ++ + E  Q    +  + +    E E+ + F +T  
Sbjct: 649 DQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNTEDADAAAEAELARQFAQTQQ 708

Query: 311 QFYY-ERMVGSMPKNFAEMVGMGVQLEEGVREGRLVKDGASDSGAKKFGNNFPRKKAPEV 369
           Q Y  E+  G+ P +  +     ++         L+ DG  +           + + P  
Sbjct: 709 QRYSGEQPAGANPFSLDDFEFSPMKA--------LLDDGPHEPLFTPIVEPVQQPQQPVA 760

Query: 370 GMVAHGRPQQNY---PAYQHVAAITPATNAIQQPGYQ-PQFQQYPQQLYQQ-QQP---RP 421
               + +PQQ     P YQ            QQP YQ PQ    PQQ YQQ QQP   +P
Sbjct: 761 PQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQYQQPQQPVAPQQQYQQPQQPVTQQP 820

Query: 422 QAQRTQFDPIPMKYADFLPALLEKNLVHTRPPPKVPERLPA 462
           Q Q+ Q   +P      L  LL +N   +RP  K    LP+
Sbjct: 821 QYQQPQQPVVPQPQDTLLHPLLMRN-GDSRPLHKPTTPLPS 860



 Score = 30.8 bits (68), Expect = 8.6
 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 15/107 (14%)

Query: 362 PRKKAPEVGMVAHGRPQQNYPAYQHVAAITPATNAIQQPGYQPQFQQYPQQLYQQQ--QP 419
           P  + P  G       QQ+  A Q   +        QQP  Q    Q PQ + QQ   +P
Sbjct: 436 PAPEQPVAGNAWQAEEQQSTFAPQ---STYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEP 492

Query: 420 RPQAQRTQFDPIPMKYADFLPALLEKNLVHTRPPPKVPERLPAWYRP 466
            P  + T+    P+ Y +     +E+     R      E+L AWY+P
Sbjct: 493 EPVVEETKPTRPPLYYFE----EVEEKRARER------EQLAAWYQP 529


>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162)
           (Transcription factor ZFM1) (Zinc finger gene in MEN1
           locus) (Mammalian branch point binding protein mBBP)
           (BBP)
          Length = 639

 Score = 39.7 bits (91), Expect = 0.019
 Identities = 33/99 (33%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 29  QNQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQ 88
           Q Q PPPPP  + + ASS+ +P W     T T SA   S P +Q   A     P A + Q
Sbjct: 503 QQQQPPPPPPPSSSMASSTPLP-WQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQ 561

Query: 89  ------------MPTHQYVAHVPPPPIKVPLAAMTYSAP 115
                        P     A  PPPP     A M Y+ P
Sbjct: 562 GNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP 600


>EXTN_TOBAC (P13983) Extensin precursor (Cell wall
           hydroxyproline-rich glycoprotein)
          Length = 620

 Score = 39.7 bits (91), Expect = 0.019
 Identities = 31/103 (30%), Positives = 37/103 (35%), Gaps = 4/103 (3%)

Query: 28  AQNQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEA 87
           A  QPPPPPP  +    + S  P   IY+  P    P    P F P     I  P     
Sbjct: 461 AYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQVQP--LPPTFSPPPPRRIHLPPPPHR 518

Query: 88  Q--MPTHQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEPIF 128
           Q   PT  Y     PP    P     +S P  H  P+   P +
Sbjct: 519 QPRPPTPTYGQPPSPPTFSPPPPRQIHSPPPPHWQPRTPTPTY 561



 Score = 35.4 bits (80), Expect = 0.35
 Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 3/103 (2%)

Query: 27  TAQNQPPPPPPFSTQAEASSSAIPDWTIYA-DTPTHSAPQRSAPWFQPFTAGEIFRPIAC 85
           T +  PPPPP +S    A  +  P    Y+   PT++ P    P + P      + P   
Sbjct: 388 TYEQSPPPPPAYSPPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSP--PPPAYSPPPP 445

Query: 86  EAQMPTHQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEPIF 128
               P     +  PP   + P    TYS P     P    PI+
Sbjct: 446 PTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIY 488



 Score = 34.3 bits (77), Expect = 0.78
 Identities = 33/103 (32%), Positives = 37/103 (35%), Gaps = 18/103 (17%)

Query: 29  QNQPP---PPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIAC 85
           Q QPP   PPPP   Q     S  P  T     PT+S P  S  +  P        P A 
Sbjct: 259 QPQPPTYSPPPPAYAQ-----SPQPSPTYSPPPPTYSPPPPSPIYSPP--------PPAY 305

Query: 86  EAQMPTHQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEPIF 128
               P        PPPP   P    TYS P    +P    PI+
Sbjct: 306 SPSPPPTPTPTFSPPPPAYSP--PPTYSPPPPTYLPLPSSPIY 346



 Score = 32.3 bits (72), Expect = 3.0
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 33  PPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPTH 92
           PPPP +S    A +   P    Y+  P   +P   +P + P       +P+      P  
Sbjct: 450 PPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSP--PPPQVQPLPPTFSPPPP 507

Query: 93  QYVAHVPPPPIKVPL-AAMTYSAP 115
           + + H+PPPP + P     TY  P
Sbjct: 508 RRI-HLPPPPHRQPRPPTPTYGQP 530



 Score = 31.6 bits (70), Expect = 5.1
 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 33  PPPPPFSTQAEASSSAIPDW-TIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
           PPPPP S    + S   P +       P +S P  + P + P      + P       P 
Sbjct: 370 PPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYSP--PPPTYSPPPPTYAQPP 427

Query: 92  HQYVAHVPPPPIKVPLAAMTYSAP 115
                + PPPP   P    TYS P
Sbjct: 428 PLPPTYSPPPPAYSPPPPPTYSPP 451



 Score = 31.2 bits (69), Expect = 6.6
 Identities = 27/85 (31%), Positives = 35/85 (40%), Gaps = 4/85 (4%)

Query: 31  QPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMP 90
           QPPP PP  +    + S  P  T     PT+S P  +  + QP      + P    A  P
Sbjct: 425 QPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPA--YAQPPPPPPTYSP-PPPAYSP 481

Query: 91  THQYVAHVPPPPIKVPLAAMTYSAP 115
                 + PPPP   PL   T+S P
Sbjct: 482 PPPSPIYSPPPPQVQPLPP-TFSPP 505


>SN3A_MOUSE (Q60520) Paired amphipathic helix protein Sin3a
          Length = 1282

 Score = 39.3 bits (90), Expect = 0.024
 Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 43/152 (28%)

Query: 29  QNQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQ 88
           Q QP PPP   +Q  + S         A TP   APQ         TA ++ +P   +A 
Sbjct: 217 QPQPQPPPQHPSQPSSQS---------APTPAQPAPQP--------TAAKVSKPSQLQAH 259

Query: 89  MPTHQYVAHVPP------PPIK--VPLAAMTYSAPVMHTIPQNEEPIFHS---------- 130
            P  Q    +PP      PP++   P+     +AP +    QN +P+  +          
Sbjct: 260 TPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSL----QNNQPVHFNHAINYVNKIK 315

Query: 131 ----GNMEAYDGVSDLREKYDELQRDVKALRG 158
               G  + Y    ++   Y + QR+ K   G
Sbjct: 316 NRFQGQPDIYKAFLEILHTYQKEQRNAKEAGG 347


>FTSK_ECO57 (Q8X5H9) DNA translocase ftsK
          Length = 1342

 Score = 39.3 bits (90), Expect = 0.024
 Identities = 58/223 (26%), Positives = 90/223 (40%), Gaps = 15/223 (6%)

Query: 252 EQYNYNVDMAPDRSDL-QAMTQGDKETFKEYAQRWRDIAAQVSPRIEEKEMTKIFLKTLN 310
           +QYN +   A  + +L +   Q  ++ + E  Q    + A+ +    E E+ + F +T  
Sbjct: 636 DQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQ 695

Query: 311 QFYY-ERMVGSMPKNFA--EMVGMGVQLEEGVREGR---LVKDGASDSGAKKFGNNFPRK 364
           Q Y  E+  G+ P +    E   M   L++G  E     +V+              + + 
Sbjct: 696 QRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQP 755

Query: 365 KAPEVGMVAHGRPQQNY-PAYQHVAAITPATNAIQQPGYQPQFQQYPQQLYQQQQ----P 419
           + P      + +PQQ   P  Q+     P   A QQ   QPQ    PQ  YQQ Q    P
Sbjct: 756 QQPVAPQPQYQQPQQQVAPQPQYQQPQQPV--APQQQYQQPQQPVAPQPQYQQPQQPVAP 813

Query: 420 RPQAQRTQFDPIPMKYADFLPALLEKNLVHTRPPPKVPERLPA 462
           +PQ Q+ Q    P      L  LL +N   +RP  K    LP+
Sbjct: 814 QPQYQQPQQPVAPQPQDTLLHPLLMRN-GDSRPLHKPTTPLPS 855


>GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor
           (Prolamin)
          Length = 296

 Score = 38.9 bits (89), Expect = 0.032
 Identities = 28/85 (32%), Positives = 34/85 (39%), Gaps = 9/85 (10%)

Query: 376 RPQQNYPAYQHVAAITPATNAIQQPGYQPQFQQYPQQLYQQQQPRPQAQ-RTQFDPIPMK 434
           +PQ   P+        P     Q PG Q QF   PQQ Y Q QP P  Q   Q  P P  
Sbjct: 27  QPQPQNPSQPQPQGQVPLVQQQQFPGQQQQFP--PQQPYPQPQPFPSQQPYLQLQPFPQ- 83

Query: 435 YADFLPALLEKNLVHTRPPPKVPER 459
                P      L + +PPP  P++
Sbjct: 84  -----PQPFPPQLPYPQPPPFSPQQ 103



 Score = 32.7 bits (73), Expect = 2.3
 Identities = 23/51 (45%), Positives = 24/51 (46%), Gaps = 6/51 (11%)

Query: 377 PQQNYPAYQHVAAITPATNAIQQPGYQPQFQQYPQQLYQQQQPRPQAQRTQ 427
           PQQ YP  Q      P     QQP  Q Q QQ  QQ  QQQQ + Q Q  Q
Sbjct: 101 PQQPYPQPQ------PQYPQPQQPISQQQAQQQQQQQQQQQQQQQQQQILQ 145



 Score = 31.2 bits (69), Expect = 6.6
 Identities = 25/76 (32%), Positives = 33/76 (42%), Gaps = 9/76 (11%)

Query: 377 PQQNYPAYQHVAAITPATNAIQQPGYQPQFQQ-YPQQLYQQQQPRPQAQRTQFDPIPMKY 435
           PQ  YP         P   + QQP  QPQ Q   PQQ   QQQ + Q Q+ Q      + 
Sbjct: 89  PQLPYPQ--------PPPFSPQQPYPQPQPQYPQPQQPISQQQAQQQQQQQQQQQQQQQQ 140

Query: 436 ADFLPALLEKNLVHTR 451
              L  +L++ L+  R
Sbjct: 141 QQILQQILQQQLIPCR 156


>FTSK_SHIFL (Q83S00) DNA translocase ftsK
          Length = 1342

 Score = 38.9 bits (89), Expect = 0.032
 Identities = 60/228 (26%), Positives = 90/228 (39%), Gaps = 25/228 (10%)

Query: 252 EQYNYNVDMAPDRSDL-QAMTQGDKETFKEYAQRWRDIAAQVSPRIEEKEMTKIFLKTLN 310
           +QYN +   A  + +L +   Q  ++ + E  Q    + A+ +    E E+ + F +T  
Sbjct: 636 DQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQ 695

Query: 311 QFYY-ERMVGSMPKNFA--EMVGMGVQLEEGVREGR---LVKDGASDSGAKKFGNNFPRK 364
           Q Y  E+  G+ P +    E   M   L++G  E     +V+              + + 
Sbjct: 696 QRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQP 755

Query: 365 KAPEVGMVAHGRPQQNYPAYQHVAAITPATNAIQQP-GYQPQFQQ-----YPQQLYQQQQ 418
           + P         PQQ Y   Q   A  P     QQP   Q Q+QQ      PQ  YQQ Q
Sbjct: 756 QQPVA-------PQQQYQQPQQQVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQ 808

Query: 419 ----PRPQAQRTQFDPIPMKYADFLPALLEKNLVHTRPPPKVPERLPA 462
               P+PQ Q+ Q    P      L  LL +N   +RP  K    LP+
Sbjct: 809 QPVAPQPQYQQPQQPVAPQPQDTLLHPLLMRN-GDSRPLHKPTTPLPS 855


>FTSK_ECOLI (P46889) DNA translocase ftsK
          Length = 1329

 Score = 38.1 bits (87), Expect = 0.054
 Identities = 56/221 (25%), Positives = 87/221 (39%), Gaps = 24/221 (10%)

Query: 252 EQYNYNVDMAPDRSDL-QAMTQGDKETFKEYAQRWRDIAAQVSPRIEEKEMTKIFLKTLN 310
           +QYN +   A  + +L +   Q  ++ + E  Q    + A+ +    E E+ + F +T  
Sbjct: 636 DQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQ 695

Query: 311 QFYY-ERMVGSMPKNFAEMVGMGVQLEEGVREGRLVKDGASDSGAKKFGNNFPRKKAPEV 369
           Q Y  E+  G+ P +  +     ++         L+ DG  +           + + P  
Sbjct: 696 QRYSGEQPAGANPFSLDDFEFSPMKA--------LLDDGPHEPLFTPIVEPVQQPQQPVA 747

Query: 370 GMVAHGRPQQNY---PAYQHVAAITPATNAIQQPGY-QPQFQQYPQQLYQQQQ----PRP 421
               + +PQQ     P YQ      P      QP Y QPQ    PQQ YQQ Q    P+ 
Sbjct: 748 PQQQYQQPQQPVPPQPQYQQ-----PQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQQ 802

Query: 422 QAQRTQFDPIPMKYADFLPALLEKNLVHTRPPPKVPERLPA 462
           Q Q+ Q    P      L  LL +N   +RP  K    LP+
Sbjct: 803 QYQQPQQPVAPQPQDTLLHPLLMRN-GDSRPLHKPTTPLPS 842


>HOG3_HORVU (P80198) Gamma-hordein 3
          Length = 289

 Score = 37.7 bits (86), Expect = 0.071
 Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 17/105 (16%)

Query: 376 RPQQNYPAYQHVAAITPATNAIQQPGYQPQFQQYPQQLYQQQQPRPQAQRTQFDP-IP-- 432
           RPQQ +P +Q +          QQP   P  QQ P+Q Y QQQP PQ Q     P +P  
Sbjct: 17  RPQQLFPQWQPLP---------QQP---PFLQQEPEQPYPQQQPLPQQQPFPQQPQLPHQ 64

Query: 433 MKYADFLPALLEKNLVHTRPPPKVPERLPAWYRPDKFCAFHQGAP 477
            ++   LP       +  +P  + P+++P   +P +   F Q  P
Sbjct: 65  HQFPQQLPQQQFPQQMPLQPQQQFPQQMP--LQPQQQPQFPQQKP 107


>SSB_SHEON (Q8EA81) Single-strand binding protein (SSB)
           (Helix-destabilizing protein)
          Length = 238

 Score = 37.4 bits (85), Expect = 0.092
 Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 21/157 (13%)

Query: 282 AQRWRDIAAQVSPRIEEK---------EMTKIFLKTLNQFYYERMVGSMPKNFAEMVGMG 332
           ++ W+D   Q   R E           E+T  +L+  +Q Y E  + +  + + +  G  
Sbjct: 38  SESWKDQQGQQQERTEWHRVVLFGKLAEITGEYLRKGSQVYLEGKLQT--RKWKDQSGQD 95

Query: 333 VQLEEGV--REGRLVKDGASDSGAKKFGNNFPRKKAPEVGMVAHGRPQQNYPAYQHVAAI 390
               E V  + G +   G+ + G    G   P    P+ G      PQQ  PA    A  
Sbjct: 96  RYSTEVVIDQSGSMQMLGSRNQG----GQGAPMGGMPQNGGY-QSAPQQAAPAQNQYAPA 150

Query: 391 TPATNAIQQPGYQPQ--FQQYP-QQLYQQQQPRPQAQ 424
             A  A Q P  QPQ  + Q P QQ Y QQQ +P  Q
Sbjct: 151 PQAAPAYQAPAPQPQSGYNQPPAQQSYGQQQAQPHVQ 187


>KAPC_DICDI (P34099) cAMP-dependent protein kinase catalytic subunit
           (EC 2.7.1.37)
          Length = 648

 Score = 37.4 bits (85), Expect = 0.092
 Identities = 28/84 (33%), Positives = 37/84 (43%), Gaps = 1/84 (1%)

Query: 343 RLVKDGASDSGAKKFGNNFPRKKAPEVGMVAHGRPQ-QNYPAYQHVAAITPATNAIQQPG 401
           RL K    +    K      R+K+P   ++A       N+      +   P  N  QQP 
Sbjct: 81  RLTKMDIEEKWDNKNYEKDEREKSPLFHILASNLNSFGNFKVPSTFSLTPPEPNKQQQPQ 140

Query: 402 YQPQFQQYPQQLYQQQQPRPQAQR 425
            QPQ QQ  QQ  QQQQP+ Q Q+
Sbjct: 141 QQPQQQQPQQQQPQQQQPQQQQQQ 164



 Score = 35.8 bits (81), Expect = 0.27
 Identities = 22/52 (42%), Positives = 25/52 (47%)

Query: 376 RPQQNYPAYQHVAAITPATNAIQQPGYQPQFQQYPQQLYQQQQPRPQAQRTQ 427
           +PQQ  P  Q      P     QQP  Q Q QQ  QQ  QQQQ + Q Q+ Q
Sbjct: 142 QPQQQQPQQQQPQQQQPQQQQQQQPQQQQQPQQQLQQNNQQQQQQLQQQQLQ 193



 Score = 31.2 bits (69), Expect = 6.6
 Identities = 22/67 (32%), Positives = 27/67 (39%), Gaps = 3/67 (4%)

Query: 359 NNFPRKKAPEVGMVAHGRPQQNYPAYQHVAAITPATNAIQQPGYQPQFQQYPQQLYQQQQ 418
           N+F   K P    +    P +     Q      P     QQ   Q Q QQ PQQ   QQQ
Sbjct: 115 NSFGNFKVPSTFSLTPPEPNKQQQPQQQPQQQQPQQQQPQQQQPQQQQQQQPQQ---QQQ 171

Query: 419 PRPQAQR 425
           P+ Q Q+
Sbjct: 172 PQQQLQQ 178



 Score = 30.8 bits (68), Expect = 8.6
 Identities = 19/50 (38%), Positives = 22/50 (44%)

Query: 378 QQNYPAYQHVAAITPATNAIQQPGYQPQFQQYPQQLYQQQQPRPQAQRTQ 427
           QQ  P  Q           +QQ   Q Q QQ  QQ  QQQQ + Q Q+ Q
Sbjct: 168 QQQQPQQQLQQNNQQQQQQLQQQQLQQQLQQQQQQQQQQQQQQQQKQQKQ 217


>EXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor
           (PELP)
          Length = 426

 Score = 37.4 bits (85), Expect = 0.092
 Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 2/110 (1%)

Query: 22  VKVLSTAQNQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFR 81
           VK  S +  + PPPPP   +A + S A    T     P  +      P   P     +  
Sbjct: 186 VKAPSPSPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAYPPVMT 245

Query: 82  PIACEAQMPTHQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEPIFHSG 131
           P    A  P    +A  P PP   PL     + PV+  +P   +P   SG
Sbjct: 246 PSPSPAAEP--PIIAPFPSPPANPPLIPRRPAPPVVKPLPPLGKPPIVSG 293


>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1
           protein)
          Length = 1362

 Score = 37.0 bits (84), Expect = 0.12
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 11/78 (14%)

Query: 29  QNQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQ 88
           Q QPPPPPP  +  + ++ A+      +  P   A Q   P  +P   G +F PI    Q
Sbjct: 773 QQQPPPPPPPPSMPQQAAPAMK-----SSPPPFIATQ--VPVLEPQLPGSVFDPIGHFTQ 825

Query: 89  ----MPTHQYVAHVPPPP 102
               +P  +   H+P PP
Sbjct: 826 PILHLPQPELPPHLPQPP 843



 Score = 33.9 bits (76), Expect = 1.0
 Identities = 22/74 (29%), Positives = 26/74 (34%), Gaps = 13/74 (17%)

Query: 29   QNQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQ 88
            Q QPPPPPP   Q        P        P H  P + +   Q        +P   + Q
Sbjct: 971  QQQPPPPPPPQPQPPPQQQHQP-----PPRPVHLQPMQFSTHIQ--------QPPPPQGQ 1017

Query: 89   MPTHQYVAHVPPPP 102
             P H      PPPP
Sbjct: 1018 QPPHPPPGQQPPPP 1031


>Z261_HUMAN (Q14202) Zinc finger protein 261 (DXS6673E protein)
          Length = 1370

 Score = 36.6 bits (83), Expect = 0.16
 Identities = 44/195 (22%), Positives = 76/195 (38%), Gaps = 42/195 (21%)

Query: 2   KTKIEELESMKT-----NMDELSELVKVLSTAQNQPPPPPPFSTQAEASSSAIP---DWT 53
           +TK+E   +++T     N+ ++    +   TA   PPPPPP + +   ++   P   +  
Sbjct: 784 QTKVENSNTVRTPEENGNLGKIPVKTRSAPTAPTPPPPPPPATPRKNKAAMCKPLMQNRG 843

Query: 54  IYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPTHQYVAHVPPP---PIKVPLAAM 110
           +       S   ++  W        I  P+     +P H Y   VP P   PI VP+   
Sbjct: 844 VSCKVEMKSKGSQTEEWKPQVIVLPI--PVPIFVPVPMHLYCQKVPVPFSMPIPVPV--- 898

Query: 111 TYSAPVMHTIPQNEEPIFHSGNMEAYDGVSDLREKY------DELQRDVKA----LRGKE 160
                          P+F    +E+ D + +  E+       + L+ D+ A    +   E
Sbjct: 899 ---------------PMFLPTTLESTDKIVETIEELKVKIPSNPLEADILAMAEMIAEAE 943

Query: 161 KFGKTAYDLC-LVPN 174
           +  K + DLC LV N
Sbjct: 944 ELDKASSDLCDLVSN 958


>WAS1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member
           1 (WASP-family protein member 1) (Verprolin homology
           domain-containing protein 1)
          Length = 559

 Score = 36.6 bits (83), Expect = 0.16
 Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 32  PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
           PPPPPP    A ++SS     T    TP    P    P   P TA +        A +  
Sbjct: 324 PPPPPPPLPSALSTSSLRASMT---STPPPPVPPPPPP---PATALQAPAVPPPPAPLQI 377

Query: 92  HQYVAHVPPPPIKVPLA----AMTYSAPVMHTIPQNEEP 126
              V H  PPPI  PL      +  +APV  T+P +  P
Sbjct: 378 APGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLP 416



 Score = 32.3 bits (72), Expect = 3.0
 Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 32  PPPPPPFSTQAEASSSAIPDWTI-YADTPTHSAPQRSA-PWFQPFTAGEIFRPIACEAQM 89
           PPPPPP +T  +A +   P   +  A    H AP   A P  QP        P+ CE  +
Sbjct: 353 PPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPV-CET-V 410

Query: 90  PTHQY----VAHVPPPPIKVPL 107
           P H      V  +PPPP   PL
Sbjct: 411 PVHPLPQGEVQGLPPPPPPPPL 432


>VP40_SHV21 (Q01002) Capsid protein P40 [Contains: Capsid protein
           VP24 (Assemblin) (Protease) (EC 3.4.21.97); Capsid
           protein VP22A]
          Length = 475

 Score = 36.2 bits (82), Expect = 0.21
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 28/148 (18%)

Query: 6   EELESMKTNMDELSELVKVLSTAQ-NQPP--PPPPFSTQAEASSSAIPDWTIYADTPTHS 62
           +++ ++  N+ +L + +K L  A  NQP   PP  FS               Y+  P H+
Sbjct: 349 KDVLNLTKNISQLQDDLKDLKQAAINQPNRYPPHHFSNP-------------YSLDPGHA 395

Query: 63  APQRSAPWFQPFTAGEIFRPIACEAQMPTHQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQ 122
           +  R AP+  P     + +P+AC  Q P  Q   +  PPP +      +  AP     P 
Sbjct: 396 SYFRYAPYGAPKPDQHLLQPLACVQQAPVVQ--PNYAPPPTE----GASNEAPK----PS 445

Query: 123 NEEPIFHSGNMEAYDGVSDLREKY-DEL 149
            +EP+ H     A D VS L++ + DEL
Sbjct: 446 VQEPV-HIDASFAQDPVSKLQKMFCDEL 472


>UREA_CRYNV (O13465) Urease (EC 3.5.1.5) (Urea amidohydrolase)
          Length = 832

 Score = 36.2 bits (82), Expect = 0.21
 Identities = 24/71 (33%), Positives = 32/71 (44%), Gaps = 1/71 (1%)

Query: 299 KEMTKIFLKTLNQFYYERMVGSMPKNFAEMVGM-GVQLEEGVREGRLVKDGASDSGAKKF 357
           +E  K+ L TL      R+   +  N AE + +   QL+E VR+GR       D G K  
Sbjct: 6   RETDKLILTTLGTLAQRRLARGLILNRAETIALISSQLQEFVRDGRHSVAELMDLGKKML 65

Query: 358 GNNFPRKKAPE 368
           G    RK  PE
Sbjct: 66  GRRHVRKGVPE 76


>KCN3_RAT (P70605) Small conductance calcium-activated potassium
           channel protein 3 (SK3)
          Length = 732

 Score = 36.2 bits (82), Expect = 0.21
 Identities = 19/49 (38%), Positives = 26/49 (52%), Gaps = 1/49 (2%)

Query: 404 PQFQQYPQQLYQQQQPRPQAQRTQFDPIPMKYADFLPALLEKNLVHTRP 452
           PQ QQ  QQ  QQQQ + Q Q+    P+P + A     L+   L+H+ P
Sbjct: 59  PQLQQQQQQQQQQQQQQQQQQQAPLHPLP-QLAQLQSQLVHPGLLHSSP 106


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.318    0.134    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,181,407
Number of Sequences: 164201
Number of extensions: 3128053
Number of successful extensions: 14988
Number of sequences better than 10.0: 162
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 13542
Number of HSP's gapped (non-prelim): 909
length of query: 508
length of database: 59,974,054
effective HSP length: 115
effective length of query: 393
effective length of database: 41,090,939
effective search space: 16148739027
effective search space used: 16148739027
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)