Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146561.3 + phase: 0 
         (262 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

RNC_LACLA (Q9CHD0) Ribonuclease III (EC 3.1.26.3) (RNase III)          42  0.002
RNC_BACCR (Q819V8) Ribonuclease III (EC 3.1.26.3) (RNase III)          42  0.002
RNC_BACAN (Q81WI8) Ribonuclease III (EC 3.1.26.3) (RNase III)          42  0.002
RNC_BACSU (P51833) Ribonuclease III (EC 3.1.26.3) (RNase III)          41  0.003
RNC_ZYMMO (Q9Z5U2) Ribonuclease III (EC 3.1.26.3) (RNase III)          41  0.003
RNC_STRPY (P66670) Ribonuclease III (EC 3.1.26.3) (RNase III)          40  0.004
RNC_STRP8 (P66672) Ribonuclease III (EC 3.1.26.3) (RNase III)          40  0.004
RNC_STRP3 (P66671) Ribonuclease III (EC 3.1.26.3) (RNase III)          40  0.004
DCR1_SCHPO (Q09884) Cell cycle control protein dcr1 (RNA interfe...    39  0.013
YBC8_SHEON (Q8E8D7) Hypothetical UPF0241 protein SO4728                38  0.022
RNC_STRPN (Q97QG6) Ribonuclease III (EC 3.1.26.3) (RNase III)          38  0.028
CIPB_CLOTM (Q01866) Cellulosomal scaffolding protein B (Cellulos...    38  0.028
RNC_LISIN (Q92AK3) Ribonuclease III (EC 3.1.26.3) (RNase III)          37  0.037
RNC_LISMO (Q8Y691) Ribonuclease III (EC 3.1.26.3) (RNase III)          37  0.048
CIPA_CLOTM (Q06851) Cellulosomal scaffolding protein A precursor...    37  0.063
RNC_HELPJ (Q9ZLH2) Ribonuclease III (EC 3.1.26.3) (RNase III)          36  0.11
MATK_ARPGI (Q8WJR9) Maturase K (Intron maturase) (Fragment)            34  0.31
RNC_OCEIH (Q8ER05) Ribonuclease III (EC 3.1.26.3) (RNase III)          34  0.41
NO51_SOYBN (P04671) Nodulin C51 precursor                              34  0.41
NO23_SOYBN (P04144) Nodulin 23 precursor (N-23)                        34  0.41

>RNC_LACLA (Q9CHD0) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 231

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 24/97 (24%), Positives = 46/97 (46%)

Query: 162 DTLLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERV 221
           + LL  AF H S    ++    + + RL FLG   L L ++++  + YP +L G + +  
Sbjct: 19  EDLLKTAFTHSSFTNEERLPKIANNERLEFLGDVALSLVISDYLYRTYPEKLEGELSKMR 78

Query: 222 YGLIGKENLPKWIKAASLQNLIFPYDNMDKIVRRDRE 258
             ++  E+L  + ++      +      +K+  RDRE
Sbjct: 79  SSIVRTESLANFSRSCGFGEFLRLGHGEEKMGGRDRE 115


>RNC_BACCR (Q819V8) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 245

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 23/82 (28%), Positives = 41/82 (49%)

Query: 162 DTLLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERV 221
           + LL  AF H S     +K     + RL FLG  VLEL ++++  Q+YP    G + +  
Sbjct: 33  EKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLR 92

Query: 222 YGLIGKENLPKWIKAASLQNLI 243
             ++ + +L ++    S  +L+
Sbjct: 93  AAIVCEPSLVRFANELSFGSLV 114


>RNC_BACAN (Q81WI8) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 245

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 23/82 (28%), Positives = 41/82 (49%)

Query: 162 DTLLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERV 221
           + LL  AF H S     +K     + RL FLG  VLEL ++++  Q+YP    G + +  
Sbjct: 33  EKLLIQAFTHSSYVNEHRKKPHEDNERLEFLGDAVLELTVSQYLFQKYPTMSEGELTKLR 92

Query: 222 YGLIGKENLPKWIKAASLQNLI 243
             ++ + +L ++    S  +L+
Sbjct: 93  AAIVCEPSLVRFANELSFGSLV 114


>RNC_BACSU (P51833) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 249

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 25/84 (29%), Positives = 39/84 (45%)

Query: 160 QFDTLLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRE 219
           Q + LLY AF H S     +K     + RL FLG  VLEL ++ F   +YP    G + +
Sbjct: 32  QNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLELTISRFLFAKYPAMSEGDLTK 91

Query: 220 RVYGLIGKENLPKWIKAASLQNLI 243
               ++ + +L       S  +L+
Sbjct: 92  LRAAIVCEPSLVSLAHELSFGDLV 115


>RNC_ZYMMO (Q9Z5U2) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 222

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 16/93 (17%)

Query: 152 LEDDNPAKQFDTLLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPR 211
           +E   P+ +   L   A  HPS       H  S + RL FLG  VL L +A +    +PR
Sbjct: 10  IEKFRPSAKDPALFLRAMTHPS-------HGNSDYQRLEFLGDRVLGLVIANWLYDLFPR 62

Query: 212 ELPGPMRERVYGLIGKEN---------LPKWIK 235
           E  G +  R+  L+   +         LP+W++
Sbjct: 63  EPEGKLSRRLNSLVSGASCASIARIVGLPQWLR 95


>RNC_STRPY (P66670) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 230

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 25/81 (30%), Positives = 41/81 (49%)

Query: 163 TLLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERVY 222
           TLL  AF H S     +    S + RL FLG  VL+L ++E+   +YP++  G M +   
Sbjct: 20  TLLETAFTHTSYANEHRLLNVSHNERLEFLGDAVLQLIISEYLFAKYPKKTEGDMSKLRS 79

Query: 223 GLIGKENLPKWIKAASLQNLI 243
            ++ +E+L  + +  S    I
Sbjct: 80  MIVREESLAGFSRFCSFDAYI 100


>RNC_STRP8 (P66672) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 230

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 25/81 (30%), Positives = 41/81 (49%)

Query: 163 TLLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERVY 222
           TLL  AF H S     +    S + RL FLG  VL+L ++E+   +YP++  G M +   
Sbjct: 20  TLLETAFTHTSYANEHRLLNVSHNERLEFLGDAVLQLIISEYLFAKYPKKTEGDMSKLRS 79

Query: 223 GLIGKENLPKWIKAASLQNLI 243
            ++ +E+L  + +  S    I
Sbjct: 80  MIVREESLAGFSRFCSFDAYI 100


>RNC_STRP3 (P66671) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 230

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 25/81 (30%), Positives = 41/81 (49%)

Query: 163 TLLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERVY 222
           TLL  AF H S     +    S + RL FLG  VL+L ++E+   +YP++  G M +   
Sbjct: 20  TLLETAFTHTSYANEHRLLNVSHNERLEFLGDAVLQLIISEYLFAKYPKKTEGDMSKLRS 79

Query: 223 GLIGKENLPKWIKAASLQNLI 243
            ++ +E+L  + +  S    I
Sbjct: 80  MIVREESLAGFSRFCSFDAYI 100


>DCR1_SCHPO (Q09884) Cell cycle control protein dcr1 (RNA interference
            pathway protein dcr1)
          Length = 1374

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 13/102 (12%)

Query: 164  LLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRE-RVY 222
            LL+LAF HPS     Q+ +   + +L FLG  VL+  + ++  ++YP    G + + + +
Sbjct: 1099 LLHLAFIHPSM--MSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYPNATSGELTDYKSF 1156

Query: 223  GLIGKE--------NLPKWI--KAASLQNLIFPYDNMDKIVR 254
             +  K         NL K+I  ++A++ + IF Y  + +  R
Sbjct: 1157 YVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELIEAFR 1198


>YBC8_SHEON (Q8E8D7) Hypothetical UPF0241 protein SO4728
          Length = 183

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 37/129 (28%), Positives = 60/129 (45%), Gaps = 9/129 (6%)

Query: 32  KNTKSRNYPLHVLAVAIDPTKDFPRNNNPQRLLKE-LAERKKITNPKSKSPPRRYILKPP 90
           K  KS +     L  A  P K   +  +P+   K+ +A     T  KS +P    + +P 
Sbjct: 36  KGNKSGSRHNEALIQAQAPQKKAAQKKDPRHGSKKPVALALPTTTEKSATPK---VKQPK 92

Query: 91  LDDKKLAERFLNSPQLSLKSFPLLSSCLPSLRLNNADKLWIDEYLLEAKQALGYSLEPSE 150
           L D++   +    P+L+     LL        L++AD+ W+D+ L +  +AL   L  S+
Sbjct: 93  LTDEQKLLKLEEDPRLN----QLLDMLEEGRNLSDADQKWLDQQLNKI-EALMIKLGISD 147

Query: 151 TLEDDNPAK 159
            LED+ PAK
Sbjct: 148 ELEDEAPAK 156


>RNC_STRPN (Q97QG6) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 232

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 25/95 (26%), Positives = 46/95 (48%)

Query: 164 LLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERVYG 223
           LL  AF H S     +    S + RL FLG  VL+L ++E+  ++YP++  G + +    
Sbjct: 21  LLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAM 80

Query: 224 LIGKENLPKWIKAASLQNLIFPYDNMDKIVRRDRE 258
           ++ +E+L  + +       I      +K   R+R+
Sbjct: 81  IVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRD 115


>CIPB_CLOTM (Q01866) Cellulosomal scaffolding protein B
           (Cellulosomal glycoprotein S1/SL) (Cellulose integrating
           protein B) (Fragment)
          Length = 772

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 30/97 (30%), Positives = 46/97 (46%), Gaps = 11/97 (11%)

Query: 74  TNPKSKSPPRRYILKPPLDDK---KLAERFLNSPQLSLKSFPLLSSCLPSLRLNNADKLW 130
           T P +  PP   I  PP DD    K+    +N+      + P+  S +PS  + N D ++
Sbjct: 447 TPPATTKPPATTI--PPSDDPNAIKIKVDTVNAKPGDTVNIPVRFSGIPSKGIANCDFVY 504

Query: 131 -IDEYLLEAKQALGYSLEPSETLEDDNPAKQFDTLLY 166
             D  +LE  +     ++P E + D NP K FDT +Y
Sbjct: 505 SYDPNVLEIIE-----IKPGELIVDPNPDKSFDTAVY 536


>RNC_LISIN (Q92AK3) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 229

 Score = 37.4 bits (85), Expect = 0.037
 Identities = 21/80 (26%), Positives = 38/80 (47%)

Query: 164 LLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERVYG 223
           LL  AF H S     ++     + RL FLG  VLEL ++++   +YP    G M +    
Sbjct: 20  LLQQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSDYLFNKYPDMAEGHMTKMRAA 79

Query: 224 LIGKENLPKWIKAASLQNLI 243
           ++ + +L ++ +A      +
Sbjct: 80  IVCEPSLVEFAEAVHFSKYV 99


>RNC_LISMO (Q8Y691) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 229

 Score = 37.0 bits (84), Expect = 0.048
 Identities = 21/80 (26%), Positives = 38/80 (47%)

Query: 164 LLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERVYG 223
           LL  AF H S     ++     + RL FLG  VLEL ++++   +YP    G M +    
Sbjct: 20  LLKQAFTHSSYVNEHRRENVKDNERLEFLGDAVLELTVSDYLFNKYPDMAEGHMTKMRAA 79

Query: 224 LIGKENLPKWIKAASLQNLI 243
           ++ + +L ++ +A      +
Sbjct: 80  IVCEPSLVEFAEAVHFSKYV 99


>CIPA_CLOTM (Q06851) Cellulosomal scaffolding protein A precursor
           (Cellulosomal glycoprotein S1/SL) (Cellulose integrating
           protein A) (Cohesin)
          Length = 1853

 Score = 36.6 bits (83), Expect = 0.063
 Identities = 29/95 (30%), Positives = 45/95 (46%), Gaps = 11/95 (11%)

Query: 76  PKSKSPPRRYILKPPLDDK---KLAERFLNSPQLSLKSFPLLSSCLPSLRLNNADKLW-I 131
           P +  PP   I  PP DD    K+    +N+      + P+  S +PS  + N D ++  
Sbjct: 543 PATTKPPATTI--PPSDDPNAIKIKVDTVNAKPGDTVNIPVRFSGIPSKGIANCDFVYSY 600

Query: 132 DEYLLEAKQALGYSLEPSETLEDDNPAKQFDTLLY 166
           D  +LE  +     ++P E + D NP K FDT +Y
Sbjct: 601 DPNVLEIIE-----IKPGELIVDPNPDKSFDTAVY 630



 Score = 33.1 bits (74), Expect = 0.70
 Identities = 23/77 (29%), Positives = 37/77 (47%), Gaps = 6/77 (7%)

Query: 91   LDDKKLAERFLNSPQLSLKSFPLLSSCLPSLRLNNADKLW-IDEYLLEAKQALGYSLEPS 149
            LD  ++    +N+        P+  S +PS  + N D ++  D  +LE  +     +EP 
Sbjct: 1217 LDAVRIKVDTVNAKPGDTVRIPVRFSGIPSKGIANCDFVYSYDPNVLEIIE-----IEPG 1271

Query: 150  ETLEDDNPAKQFDTLLY 166
            E + D NP K FDT +Y
Sbjct: 1272 ELIVDPNPTKSFDTAVY 1288



 Score = 31.2 bits (69), Expect = 2.7
 Identities = 22/77 (28%), Positives = 37/77 (47%), Gaps = 6/77 (7%)

Query: 91   LDDKKLAERFLNSPQLSLKSFPLLSSCLPSLRLNNADKLW-IDEYLLEAKQALGYSLEPS 149
            LD  ++    +N+        P+  S +PS  + N D ++  D  +LE  +     +EP 
Sbjct: 1052 LDAVRIKVDTVNAKPGDTVRIPVRFSGIPSKGIANCDFVYSYDPNVLEIIE-----IEPG 1106

Query: 150  ETLEDDNPAKQFDTLLY 166
            + + D NP K FDT +Y
Sbjct: 1107 DIIVDPNPDKSFDTAVY 1123



 Score = 31.2 bits (69), Expect = 2.7
 Identities = 22/77 (28%), Positives = 37/77 (47%), Gaps = 6/77 (7%)

Query: 91  LDDKKLAERFLNSPQLSLKSFPLLSSCLPSLRLNNADKLW-IDEYLLEAKQALGYSLEPS 149
           LD  ++    +N+        P+  S +PS  + N D ++  D  +LE  +     +EP 
Sbjct: 887 LDAVRIKVDTVNAKPGDTVRIPVRFSGIPSKGIANCDFVYSYDPNVLEIIE-----IEPG 941

Query: 150 ETLEDDNPAKQFDTLLY 166
           + + D NP K FDT +Y
Sbjct: 942 DIIVDPNPDKSFDTAVY 958



 Score = 31.2 bits (69), Expect = 2.7
 Identities = 22/77 (28%), Positives = 37/77 (47%), Gaps = 6/77 (7%)

Query: 91   LDDKKLAERFLNSPQLSLKSFPLLSSCLPSLRLNNADKLW-IDEYLLEAKQALGYSLEPS 149
            LD  ++    +N+        P+  S +PS  + N D ++  D  +LE  +     +EP 
Sbjct: 1382 LDAVRIKVDTVNAKPGDTVRIPVRFSGIPSKGIANCDFVYSYDPNVLEIIE-----IEPG 1436

Query: 150  ETLEDDNPAKQFDTLLY 166
            + + D NP K FDT +Y
Sbjct: 1437 DIIVDPNPDKSFDTAVY 1453



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/56 (33%), Positives = 30/56 (52%), Gaps = 6/56 (10%)

Query: 112 PLLSSCLPSLRLNNADKLW-IDEYLLEAKQALGYSLEPSETLEDDNPAKQFDTLLY 166
           P+  S +PS  + N D ++  D  +LE  +     +EP + + D NP K FDT +Y
Sbjct: 743 PVRFSGIPSKGIANCDFVYSYDPNVLEIIE-----IEPGDIIVDPNPDKSFDTAVY 793



 Score = 29.6 bits (65), Expect = 7.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 146  LEPSETLEDDNPAKQFDTLLY 166
            +EP E + D NP K FDT +Y
Sbjct: 1597 IEPGELIVDPNPTKSFDTAVY 1617


>RNC_HELPJ (Q9ZLH2) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 239

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 30/122 (24%), Positives = 49/122 (39%), Gaps = 19/122 (15%)

Query: 122 RLNNADKLWIDEYLLEAKQALGYSLEPSETLEDDNPAKQFDTLLYLAFQHPSCERTKQKH 181
           R  N+  +  D   L  ++ALGYS +    LE              A  H SC+      
Sbjct: 5   RSQNSPYVTPDNPYLTLEKALGYSFKDKRLLEQ-------------ALTHKSCK------ 45

Query: 182 VRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERVYGLIGKENLPKWIKAASLQN 241
           +   + RL FLG  VL L + E    ++ +   G + +    ++      K  KA +LQ+
Sbjct: 46  LALNNERLEFLGDAVLGLVIGELLYHKFYQYDEGKLSKLRASIVSAHGFTKLAKAIALQD 105

Query: 242 LI 243
            +
Sbjct: 106 YL 107


>MATK_ARPGI (Q8WJR9) Maturase K (Intron maturase) (Fragment)
          Length = 509

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 23/58 (39%), Positives = 32/58 (54%), Gaps = 3/58 (5%)

Query: 167 LAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELPGPMRERVYGL 224
           LA +H S  RT  + + SG    FFL +   E +L+  FLQ+ P  L G  RER++ L
Sbjct: 443 LARKHKSTVRTFMRRLGSGFLEEFFLEE---EQSLSLIFLQKIPFPLHGLHRERIWYL 497


>RNC_OCEIH (Q8ER05) Ribonuclease III (EC 3.1.26.3) (RNase III)
          Length = 228

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 160 QFDTLLYLAFQHPSCERTKQKHVRSGHSRLFFLGQYVLELALAEFFLQRYPRELP 214
           Q   LL  AF H S     +K   S + RL FLG  VLELA+++ +L R  +++P
Sbjct: 15  QQKALLKEAFTHSSYVNEHRKQRLSDNERLEFLGDAVLELAVSQ-YLYRNNKDMP 68


>NO51_SOYBN (P04671) Nodulin C51 precursor
          Length = 224

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 20/78 (25%), Positives = 35/78 (44%)

Query: 39  YPLHVLAVAIDPTKDFPRNNNPQRLLKELAERKKITNPKSKSPPRRYILKPPLDDKKLAE 98
           Y   V  + ++P++ FPR NNPQ   K   +  ++     + PP R    P L       
Sbjct: 92  YQTSVTNLQVEPSEVFPRKNNPQGGRKSKLDDHQVQPLSFRLPPFRLPPMPKLGPTSPII 151

Query: 99  RFLNSPQLSLKSFPLLSS 116
           R + SP ++ +   L+ +
Sbjct: 152 RTIPSPPIAPRDLSLIET 169


>NO23_SOYBN (P04144) Nodulin 23 precursor (N-23)
          Length = 220

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 20/78 (25%), Positives = 35/78 (44%)

Query: 39  YPLHVLAVAIDPTKDFPRNNNPQRLLKELAERKKITNPKSKSPPRRYILKPPLDDKKLAE 98
           Y   V  + ++P++ FPR NNPQ   K   +  ++     + PP R    P L       
Sbjct: 88  YQTSVTNLQVEPSEVFPRKNNPQGGRKSKLDDHQVQPLSFRLPPFRLPPMPKLGPTSPII 147

Query: 99  RFLNSPQLSLKSFPLLSS 116
           R + SP ++ +   L+ +
Sbjct: 148 RTIPSPPIAPRDLSLIET 165


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.318    0.137    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,327,730
Number of Sequences: 164201
Number of extensions: 1375788
Number of successful extensions: 3409
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3370
Number of HSP's gapped (non-prelim): 55
length of query: 262
length of database: 59,974,054
effective HSP length: 108
effective length of query: 154
effective length of database: 42,240,346
effective search space: 6505013284
effective search space used: 6505013284
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)


Medicago: description of AC146561.3