Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146557.5 - phase: 0 
         (146 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CA21_ONCMY (O93484) Collagen alpha 2(I) chain precursor                34  0.097
R101_YEAST (P33400) Regulatory protein RIM101 (Protein RIM1)           33  0.17
FYV1_DROME (O96838) Putative FYVE finger-containing phosphoinosi...    33  0.22
CCAD_DROME (Q24270) Voltage-dependent calcium channel type D alp...    33  0.22
RTOA_DICDI (P54681) Protein rtoA (Ratio-A)                             32  0.37
CYS4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)      32  0.37
CLF_ARATH (P93831) Polycomb group protein CURLY LEAF                   32  0.37
SER1_GALME (O96614) Sericin-1 (Silk gum protein 1) (Fragment)          32  0.63
UBQ4_HUMAN (Q9NRR5) Ubiquilin 4 (Ataxin-1 ubiquitin-like interac...    31  0.82
TOLA_HAEIN (P44678) TolA protein                                       31  0.82
SUR6_FUGRU (O57594) Surfeit locus protein 6 homolog                    31  0.82
MAP2_HUMAN (P11137) Microtubule-associated protein 2 (MAP 2) (MA...    31  0.82
VIT1_CHICK (P87498) Vitellogenin I precursor (Minor vitellogenin...    31  1.1
HYR1_CANAL (P46591) Hyphally regulated protein precursor               31  1.1
YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5                  30  1.4
YHK0_YEAST (P38772) Hypothetical protein YHR040w                       30  1.4
SUZ2_DROME (P25172) Suppressor 2 of zeste protein (Protein poste...    30  1.4
DMT1_HUMAN (Q9Y5R6) Doublesex- and mab-3-related transcription f...    30  1.4
US45_LACLC (P22865) Secreted 45 kDa protein precursor                  30  1.8
SSR1_HUMAN (P30872) Somatostatin receptor type 1 (SS1R) (SRIF-2)       30  1.8

>CA21_ONCMY (O93484) Collagen alpha 2(I) chain precursor
          Length = 1356

 Score = 34.3 bits (77), Expect = 0.097
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 68  AADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPS 127
           AA F+ D G+   PGS  A  SS Q   +G AG  G+     +   +G   P   +G+  
Sbjct: 935 AAGFKGDRGE---PGSPGALGSSGQPGPNGPAGSAGRPGNRGESGPTGNGGPVGAVGARG 991

Query: 128 GNNLTPAGP 136
                PAGP
Sbjct: 992 APG--PAGP 998


>R101_YEAST (P33400) Regulatory protein RIM101 (Protein RIM1)
          Length = 625

 Score = 33.5 bits (75), Expect = 0.17
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 58  KTPQLKRKSEAADFEADSGDRMTPGSTAA------ANSSVQTPVSGKAGKGGKSSRMTKC 111
           K P+++  +EA        +RM+PGST++      + S + TP     G    S   +  
Sbjct: 54  KRPRIRCTTEAIGLNGQEDERMSPGSTSSSCLPYHSTSHLNTPPYDLLGASAVSPTTSSS 113

Query: 112 NRSGTQTPGSNIGSPSGNN 130
           + S + +P +   +P+G++
Sbjct: 114 SDSSSSSPLAQAHNPAGDD 132


>FYV1_DROME (O96838) Putative FYVE finger-containing phosphoinositide
            kinase (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate
            5-kinase) (PIP5K) (PtdIns(4)P-5-kinase)
          Length = 1809

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 10/96 (10%)

Query: 20   RQLPFSSMKPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSGD-- 77
            R+   SS+    L + DY +   +   N +    +     PQLKRK   A+  +D+ D  
Sbjct: 1373 RETDLSSVIAYSLTSMDYQKAIDEAEANSNAAHSS-----PQLKRKIPLAESVSDAEDSP 1427

Query: 78   ---RMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTK 110
               R +  ++AA N+SV +P +  +    KS    K
Sbjct: 1428 SLSRTSSNTSAAPNASVPSPATAASESEEKSKERIK 1463


>CCAD_DROME (Q24270) Voltage-dependent calcium channel type D
           alpha-1 subunit (DmCA1D)
          Length = 2516

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 27/76 (35%), Positives = 35/76 (45%), Gaps = 2/76 (2%)

Query: 70  DFEADSGDRMTPGSTAAANSSVQTPVSGKAG-KGGKSSRMTKCNRSGTQTPGSNIGSPSG 128
           D    SG R  P ST  A S+V + +   A  K     R  K N  G+++ GS  G  +G
Sbjct: 123 DSNQPSGTRRRPTSTELALSNVTSQIVNNATYKLDFKQRRHKSNNGGSES-GSLTGIATG 181

Query: 129 NNLTPAGPCRYDSSLG 144
              +PAGP    SS G
Sbjct: 182 PATSPAGPTGPTSSSG 197


>RTOA_DICDI (P54681) Protein rtoA (Ratio-A)
          Length = 400

 Score = 32.3 bits (72), Expect = 0.37
 Identities = 25/90 (27%), Positives = 38/90 (41%), Gaps = 12/90 (13%)

Query: 58  KTPQLKRKSEAADFEADSGDRMTPGSTAAANS-----------SVQTPVSGKAGKGGKSS 106
           K   +   S++   E DS D  + GS + A+S           S  T  SG    G  +S
Sbjct: 53  KNGSIGSSSQSLSSEVDSSDISSSGSNSTASSEGSVSSSSNSGSQSTSNSGSEASGSSNS 112

Query: 107 RMTKCNRSGTQTPG-SNIGSPSGNNLTPAG 135
                + SG++  G SN GS S  + + +G
Sbjct: 113 GSQSTSNSGSEASGSSNSGSQSSTDSSNSG 142



 Score = 29.3 bits (64), Expect = 3.1
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)

Query: 66  SEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGS 125
           SE++   ++SG   + GS+ + + S     SG +  G +SS  +  + S + +  SN GS
Sbjct: 207 SESSSGSSNSGSESSSGSSNSGSES----SSGSSNSGSESSSGSSNSGSESSSGSSNSGS 262

Query: 126 PSGNNLTPAG 135
            S +  + +G
Sbjct: 263 ESSSGSSNSG 272



 Score = 29.3 bits (64), Expect = 3.1
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)

Query: 66  SEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGS 125
           SE++   ++SG   + GS+ + + S     SG +  G +SS  +  + S + +  SN GS
Sbjct: 218 SESSSGSSNSGSESSSGSSNSGSES----SSGSSNSGSESSSGSSNSGSESSSGSSNSGS 273

Query: 126 PSGNNLTPAG 135
            S +  + +G
Sbjct: 274 ESSSGSSNSG 283



 Score = 28.5 bits (62), Expect = 5.3
 Identities = 20/76 (26%), Positives = 35/76 (45%), Gaps = 4/76 (5%)

Query: 66  SEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGS 125
           SE++   ++SG   + GS+ + + S     SG +  G +SS  +  + S + +  SN GS
Sbjct: 229 SESSSGSSNSGSESSSGSSNSGSES----SSGSSNSGSESSSGSSNSGSESSSGSSNSGS 284

Query: 126 PSGNNLTPAGPCRYDS 141
            S  +         DS
Sbjct: 285 ESSGSSNSGSESSSDS 300



 Score = 27.7 bits (60), Expect = 9.1
 Identities = 21/59 (35%), Positives = 32/59 (53%), Gaps = 5/59 (8%)

Query: 74  DSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQ--TPGSNIGSPSGNN 130
           DS +  + GST ++NS  Q+  +  +  G +SS  T  + SG+Q  T  SN GS S  +
Sbjct: 137 DSSNSGSQGSTGSSNSGSQSS-TDSSNSGSQSS--TDSSNSGSQGSTGSSNSGSESSGS 192


>CYS4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)
          Length = 442

 Score = 32.3 bits (72), Expect = 0.37
 Identities = 23/80 (28%), Positives = 36/80 (44%), Gaps = 1/80 (1%)

Query: 50  LETEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMT 109
           L+   +VV        S  +     S    T G T++++SS +   S  +GK   SS   
Sbjct: 275 LDHGVLVVGYGSGSSSSSGSSSGKSSSSSSTGGKTSSSSSSGKAS-SSSSGKASSSSSSG 333

Query: 110 KCNRSGTQTPGSNIGSPSGN 129
           K + + + T GS  GS SG+
Sbjct: 334 KTSSAASSTSGSQSGSQSGS 353


>CLF_ARATH (P93831) Polycomb group protein CURLY LEAF
          Length = 902

 Score = 32.3 bits (72), Expect = 0.37
 Identities = 21/78 (26%), Positives = 38/78 (47%), Gaps = 3/78 (3%)

Query: 45  RRNQDLETEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGK 104
           +RN++   E +  KT + ++K+EA+D ++ +    +P      ++   T  S K  K G 
Sbjct: 412 KRNKNRVAERVPRKTQKRQKKTEASDSDSIASGSCSPSDAKHKDNEDATSSSQKHVKSGN 471

Query: 105 SSRMTKCNRSGTQTPGSN 122
           S    K  ++GT    SN
Sbjct: 472 SG---KSRKNGTPAEVSN 486


>SER1_GALME (O96614) Sericin-1 (Silk gum protein 1) (Fragment)
          Length = 115

 Score = 31.6 bits (70), Expect = 0.63
 Identities = 20/77 (25%), Positives = 35/77 (44%)

Query: 66  SEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGS 125
           S ++     SG   + GS+ ++ SS  +  SG +G  G S        SG+ +  S+ GS
Sbjct: 33  SGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSSSSSSNGS 92

Query: 126 PSGNNLTPAGPCRYDSS 142
            S +  + +   +  SS
Sbjct: 93  GSSSGSSQSSGSQGGSS 109



 Score = 30.8 bits (68), Expect = 1.1
 Identities = 18/70 (25%), Positives = 31/70 (43%)

Query: 66  SEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGS 125
           S ++     SG   + GS+ ++ SS  +  SG +G  G S        SG+     + GS
Sbjct: 24  SGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGS 83

Query: 126 PSGNNLTPAG 135
            S ++   +G
Sbjct: 84  SSSSSSNGSG 93



 Score = 29.3 bits (64), Expect = 3.1
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 66  SEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQ-TPGSNIG 124
           S ++     SG   + GS+ ++ SS  +  SG +G  G S        SG+  + GS+  
Sbjct: 12  SGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGS 71

Query: 125 SPSGNNLTPAGPCRYDSSLG 144
           S S  +   +G     SS G
Sbjct: 72  SGSSGSSGSSGSSSSSSSNG 91



 Score = 28.5 bits (62), Expect = 5.3
 Identities = 20/63 (31%), Positives = 31/63 (48%), Gaps = 1/63 (1%)

Query: 66  SEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSG-TQTPGSNIG 124
           S ++     SG   + GS+ ++ SS  +  SG +G    SS     + SG +Q+ GS  G
Sbjct: 48  SGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSSSSSSNGSGSSSGSSQSSGSQGG 107

Query: 125 SPS 127
           S S
Sbjct: 108 SSS 110



 Score = 27.7 bits (60), Expect = 9.1
 Identities = 16/60 (26%), Positives = 26/60 (42%)

Query: 66  SEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGS 125
           S ++     SG   + GS+ ++ SS  +  SG +G  G S        SG+     + GS
Sbjct: 3   SGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGS 62



 Score = 27.7 bits (60), Expect = 9.1
 Identities = 16/60 (26%), Positives = 26/60 (42%)

Query: 66  SEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGS 125
           S ++     SG   + GS+ ++ SS  +  SG +G  G S        SG+     + GS
Sbjct: 6   SGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGS 65


>UBQ4_HUMAN (Q9NRR5) Ubiquilin 4 (Ataxin-1 ubiquitin-like
           interacting protein A1U)
          Length = 601

 Score = 31.2 bits (69), Expect = 0.82
 Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 13/83 (15%)

Query: 52  TEAIVVKTPQLKRKSEAADFEADS------GDRMTPGSTAA-ANSSVQTPVSGKAGKGGK 104
           T  +V+KTPQ  +   AA   + S          TP S A  A  S     S  AG G +
Sbjct: 77  TVHLVIKTPQKAQDPAAATASSPSTPDPASAPSTTPASPATPAQPSTSGSASSDAGSGSR 136

Query: 105 SSRMTKCNRSGTQTPGSNIGSPS 127
            S        G  +PG+  GSPS
Sbjct: 137 RSS------GGGPSPGAGEGSPS 153


>TOLA_HAEIN (P44678) TolA protein
          Length = 372

 Score = 31.2 bits (69), Expect = 0.82
 Identities = 27/95 (28%), Positives = 40/95 (41%), Gaps = 16/95 (16%)

Query: 50  LETEAIVVKTPQLKRKSEA-------------ADFEADSGDRMTPGSTAAANSSVQTPVS 96
           LE EA      + K K+EA             AD EA +    T     A  +S+   ++
Sbjct: 194 LEAEAKAKAVAEAKAKAEAEAKAKAAAEAKAKADAEAKAA---TEAKRKADQASLDDFLN 250

Query: 97  GKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNL 131
           G    GG +S+    N+ GTQ  G+ +GS  G  +
Sbjct: 251 GGDIGGGSASKGGNTNKGGTQGSGAALGSGDGGKV 285


>SUR6_FUGRU (O57594) Surfeit locus protein 6 homolog
          Length = 359

 Score = 31.2 bits (69), Expect = 0.82
 Identities = 17/55 (30%), Positives = 24/55 (42%)

Query: 63  KRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQ 117
           K+K     F+       TPG    + SS+Q    G A K G+ ++    N S TQ
Sbjct: 46  KKKGNRKSFKEKDTRGKTPGFPKKSLSSIQPTQKGAANKNGQKAQTQSINGSSTQ 100


>MAP2_HUMAN (P11137) Microtubule-associated protein 2 (MAP 2) (MAP-2)
          Length = 1827

 Score = 31.2 bits (69), Expect = 0.82
 Identities = 31/126 (24%), Positives = 47/126 (36%), Gaps = 5/126 (3%)

Query: 16   IMQQRQLPFSSMKPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADS 75
            I   R    S +K    AA      AP   +    +    V K+P+ KR S         
Sbjct: 1491 IKYTRPTHLSCVKRKTTAAGGESALAPSVFKQAKDKVSDGVTKSPE-KRSSLPRPSSILP 1549

Query: 76   GDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNLTPAG 135
              R   G     + S+ + +S  A +  +S  + +  +SGT TP     +P    +TP  
Sbjct: 1550 PRRGVSGDRDENSFSLNSSISSSARRTTRSEPIRRAGKSGTSTP----TTPGSTAITPGT 1605

Query: 136  PCRYDS 141
            P  Y S
Sbjct: 1606 PPSYSS 1611


>VIT1_CHICK (P87498) Vitellogenin I precursor (Minor vitellogenin)
            [Contains: Lipovitellin I (LVI); Phosvitin (PV);
            Lipovitellin II (LVII); YGP42]
          Length = 1912

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 17/65 (26%), Positives = 31/65 (47%)

Query: 66   SEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGS 125
            S ++   +DS       S++ ++SS  +  S  + K   SSR +K NRS + +   +  S
Sbjct: 1160 SSSSSSSSDSSSSSRSSSSSDSSSSSSSSSSSSSSKSKSSSRSSKSNRSSSSSNSKDSSS 1219

Query: 126  PSGNN 130
             S  +
Sbjct: 1220 SSSKS 1224


>HYR1_CANAL (P46591) Hyphally regulated protein precursor
          Length = 937

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 20/78 (25%), Positives = 37/78 (46%), Gaps = 2/78 (2%)

Query: 47  NQDLETEAIVVKTPQLKRKSEA--ADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGK 104
           N +  T+A      Q +  S A  +  E  S + M+  ST A+N+S++T     +     
Sbjct: 406 NSESSTDAGSSSISQSESSSTAITSSSETSSSESMSASSTTASNTSIETDSGIVSQSESS 465

Query: 105 SSRMTKCNRSGTQTPGSN 122
           S+ ++   +S T +PG +
Sbjct: 466 SNALSSTEQSITSSPGQS 483


>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5
          Length = 317

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 21/62 (33%), Positives = 27/62 (42%), Gaps = 6/62 (9%)

Query: 81  PGSTAAANSSVQTPVSGKAGKGGKSSRMTK-----CNRSGTQTPGSNIGSP-SGNNLTPA 134
           PG    A S  Q    G  G+ G+S + ++       R G Q P    G P SG+   PA
Sbjct: 172 PGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQGPPGAPGQPGSGSTPGPA 231

Query: 135 GP 136
           GP
Sbjct: 232 GP 233


>YHK0_YEAST (P38772) Hypothetical protein YHR040w
          Length = 366

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 14/53 (26%), Positives = 26/53 (48%)

Query: 30  PFLAAADYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSGDRMTPG 82
           P    +  ++F  + R  +D E ++   + P  K   +A+D ++DS D   PG
Sbjct: 306 PLEHTSTLNKFIDNAREEEDAEEDSQPTEEPVQKETQDASDSDSDSDDDYNPG 358


>SUZ2_DROME (P25172) Suppressor 2 of zeste protein (Protein
           posterior sex combs)
          Length = 1365

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 45  RRNQDLETEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGK 104
           R NQD+E E  V ++   K  + A D E++         + +  S V+     K     K
Sbjct: 246 RINQDIEPEHSVRRSKSAKSVTFAEDLESEI-------DSGSPRSKVRCKTPPKVSPSSK 298

Query: 105 SSRMTKCNRSG-TQTPGSNIGSPSGNNL 131
           + R+T   R    ++P SN  S   N++
Sbjct: 299 NKRLTSSKREAEPESPVSNFKSLRSNDM 326


>DMT1_HUMAN (Q9Y5R6) Doublesex- and mab-3-related transcription
           factor 1 (DM domain expressed in testis protein 1)
          Length = 373

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 18/55 (32%), Positives = 26/55 (46%)

Query: 81  PGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNLTPAG 135
           P + + A  +   P  G+AG  GK+S       SGT   GS+ G  SG+  +  G
Sbjct: 10  PSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGTSAGGSSRGGGSGSGASDLG 64


>US45_LACLC (P22865) Secreted 45 kDa protein precursor
          Length = 461

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 19/66 (28%), Positives = 32/66 (47%), Gaps = 1/66 (1%)

Query: 73  ADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKC-NRSGTQTPGSNIGSPSGNNL 131
           ++S +  +  S+++++SS  +  S  +  GG ++  T   N  GT T GS I S    N 
Sbjct: 290 SNSSNSSSNSSSSSSSSSSSSSSSSNSNAGGNTNSGTSTGNTGGTTTGGSGINSSPIGNP 349

Query: 132 TPAGPC 137
              G C
Sbjct: 350 YAGGGC 355


>SSR1_HUMAN (P30872) Somatostatin receptor type 1 (SS1R) (SRIF-2)
          Length = 391

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 79  MTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSN 122
           M P  TA++ SS  +P  G  G+GG S         G + PG N
Sbjct: 1   MFPNGTASSPSSSPSPSPGSCGEGGGSRGPGAGAADGMEEPGRN 44


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.309    0.125    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,628,835
Number of Sequences: 164201
Number of extensions: 750031
Number of successful extensions: 2305
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 2195
Number of HSP's gapped (non-prelim): 163
length of query: 146
length of database: 59,974,054
effective HSP length: 100
effective length of query: 46
effective length of database: 43,553,954
effective search space: 2003481884
effective search space used: 2003481884
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)


Medicago: description of AC146557.5