BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146553.10 - phase: 0
(301 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
P4H2_CAEEL (Q20065) Prolyl 4-hydroxylase alpha-2 subunit precurs... 112 1e-24
P4H1_RAT (P54001) Prolyl 4-hydroxylase alpha-1 subunit precursor... 111 2e-24
P4HA_CHICK (P16924) Prolyl 4-hydroxylase alpha subunit (EC 1.14.... 110 3e-24
P4H1_MOUSE (Q60715) Prolyl 4-hydroxylase alpha-1 subunit precurs... 110 4e-24
P4H1_HUMAN (P13674) Prolyl 4-hydroxylase alpha-1 subunit precurs... 110 6e-24
P4H1_CAEEL (Q10576) Prolyl 4-hydroxylase alpha-1 subunit precurs... 102 1e-21
P4H2_HUMAN (O15460) Prolyl 4-hydroxylase alpha-2 subunit precurs... 101 3e-21
P4H2_MOUSE (Q60716) Prolyl 4-hydroxylase alpha-2 subunit precurs... 100 4e-21
EGLX_MOUSE (Q8BG58) Putative HIF-prolyl hydroxylase PH-4 (EC 1.1... 76 9e-14
EGLX_HUMAN (Q9NXG6) Putative HIF-prolyl hydroxylase PH-4 (EC 1.1... 76 9e-14
YTQJ_CAEEL (Q19673) Hypothetical tyrosinase-like protein F21C3.2... 44 5e-04
RBP2_PLAVB (Q00799) Reticulocyte binding protein 2 precursor (Pv... 35 0.23
YKH1_CAEEL (P34269) Hypothetical tyrosinase-like protein C02C2.1... 35 0.30
HBA_EUDCR (P10057) Hemoglobin alpha chain 31 3.3
CIB1_RAT (Q00954) Sodium channel beta-1 subunit precursor 31 4.3
CIB1_RABIT (P53788) Sodium channel beta-1 subunit precursor 31 4.3
CIB1_MOUSE (P97952) Sodium channel beta-1 subunit precursor 31 4.3
CIB1_HUMAN (Q07699) Sodium channel beta-1 subunit precursor 31 4.3
YOW6_CAEEL (P30652) Hypothetical protein ZK643.6 in chromosome III 30 5.6
YG2D_YEAST (P53246) Hypothetical 98.1 kDa protein in ROM1-UPF3 i... 30 5.6
>P4H2_CAEEL (Q20065) Prolyl 4-hydroxylase alpha-2 subunit precursor
(EC 1.14.11.2) (4-PH alpha-2)
(Procollagen-proline,2-oxoglutarate-4-dioxygenase
alpha-2 subunit)
Length = 539
Score = 112 bits (279), Expect = 1e-24
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 37 PTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSEVRTSSGM 96
P KV+ + + P A ++K + D E + + +A +LKR+ V ++ +GE + + R S
Sbjct: 315 PIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSA 374
Query: 97 FISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIA---- 152
++ + D ++ + +I +T L + E++QV Y G YDPH+D+ + A
Sbjct: 375 WLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTL 434
Query: 153 RGGHRVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRGDAL 212
G+R+ATVL Y++ +GG TVF + G AV P + DAL
Sbjct: 435 NTGNRIATVLFYMSQPERGGATVFNHL---------------------GTAVFPSKNDAL 473
Query: 213 LFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIH 247
+ +L + D + HA CPV+ G KW + KWIH
Sbjct: 474 FWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIH 508
>P4H1_RAT (P54001) Prolyl 4-hydroxylase alpha-1 subunit precursor
(EC 1.14.11.2) (4-PH alpha-1)
(Procollagen-proline,2-oxoglutarate-4-dioxygenase
alpha-1 subunit)
Length = 534
Score = 111 bits (278), Expect = 2e-24
Identities = 69/235 (29%), Positives = 111/235 (46%), Gaps = 28/235 (11%)
Query: 17 LICKIHFALGSYAGTSAIIDPTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSA 76
L C+ H I+ P K + KPR + ++D E + + +AK L R+
Sbjct: 308 LFCRYH---DGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRAT 364
Query: 77 VADNLSGESKLSEVRTSSGMFISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQ 136
V D +G+ ++ R S ++S +D +VS I +I T L E++QV Y G
Sbjct: 365 VHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGG 424
Query: 137 KYDPHYDYF----ADKVNIARGGHRVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDE 192
+Y+PH+D+ D G+R+AT L Y+++V+ GG TVFP
Sbjct: 425 QYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEV------------- 471
Query: 193 DLSECGKKGVAVNPRRGDALLFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIH 247
G +V P++G A+ + +L + D + HA CPV+ G KW + KW+H
Sbjct: 472 --------GASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>P4HA_CHICK (P16924) Prolyl 4-hydroxylase alpha subunit (EC
1.14.11.2) (4-PH alpha)
(Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha
subunit)
Length = 516
Score = 110 bits (276), Expect = 3e-24
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 25/218 (11%)
Query: 34 IIDPTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSEVRTS 93
I+ P K + KPR + ++D E + + +AK L R+ V D +G+ + R S
Sbjct: 304 ILGPVKQEDEWDKPRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVS 363
Query: 94 SGMFISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDY----FADKV 149
++S + +VS I +I T L E++QV Y G +Y+PH+D+ D
Sbjct: 364 KSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAF 423
Query: 150 NIARGGHRVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRG 209
G+R+AT L Y+++V+ GG TVFP G +V P++G
Sbjct: 424 KELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKG 462
Query: 210 DALLFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIH 247
A+ + +L P+ D + HA CPV+ G KW + KW+H
Sbjct: 463 TAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWLH 500
>P4H1_MOUSE (Q60715) Prolyl 4-hydroxylase alpha-1 subunit precursor
(EC 1.14.11.2) (4-PH alpha-1)
(Procollagen-proline,2-oxoglutarate-4-dioxygenase
alpha-1 subunit)
Length = 534
Score = 110 bits (275), Expect = 4e-24
Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 28/235 (11%)
Query: 17 LICKIHFALGSYAGTSAIIDPTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSA 76
L C+ H I+ P K + KPR + ++D E + + +AK L+R+
Sbjct: 308 LFCRYH---DGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRAT 364
Query: 77 VADNLSGESKLSEVRTSSGMFISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQ 136
+++ ++G + R S ++S +D +VS I +I T L E++QV Y G
Sbjct: 365 ISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGG 424
Query: 137 KYDPHYDYF----ADKVNIARGGHRVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDE 192
+Y+PH+D+ D G+R+AT L Y+++V+ GG TVFP
Sbjct: 425 QYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEV------------- 471
Query: 193 DLSECGKKGVAVNPRRGDALLFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIH 247
G +V P++G A+ + +L + D + HA CPV+ G KW + KW+H
Sbjct: 472 --------GASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>P4H1_HUMAN (P13674) Prolyl 4-hydroxylase alpha-1 subunit precursor
(EC 1.14.11.2) (4-PH alpha-1)
(Procollagen-proline,2-oxoglutarate-4-dioxygenase
alpha-1 subunit)
Length = 534
Score = 110 bits (274), Expect = 6e-24
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 28/235 (11%)
Query: 17 LICKIHFALGSYAGTSAIIDPTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSA 76
L C+ H I+ P K + KPR + ++D E + + +AK L+R+
Sbjct: 308 LFCRYH---DGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRAT 364
Query: 77 VADNLSGESKLSEVRTSSGMFISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQ 136
+++ ++G+ + R S ++S ++ +VS I +I T L E++QV Y G
Sbjct: 365 ISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGG 424
Query: 137 KYDPHYDYF----ADKVNIARGGHRVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDE 192
+Y+PH+D+ D G+R+AT L Y+++V+ GG TVFP
Sbjct: 425 QYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEV------------- 471
Query: 193 DLSECGKKGVAVNPRRGDALLFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIH 247
G +V P++G A+ + +L + D + HA CPV+ G KW + KW+H
Sbjct: 472 --------GASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>P4H1_CAEEL (Q10576) Prolyl 4-hydroxylase alpha-1 subunit precursor
(EC 1.14.11.2) (4-PH alpha-1)
(Procollagen-proline,2-oxoglutarate-4-dioxygenase
alpha-1 subunit)
Length = 559
Score = 102 bits (254), Expect = 1e-21
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 37 PTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSEVRTSSGM 96
P KV+ + P A ++K ++D E + +AK +L R+ V D+++G+ + R S
Sbjct: 318 PIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSA 377
Query: 97 FISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYF----ADKVNIA 152
++ + + +V + +I T L E E++Q+ Y G YDPH+D+ +
Sbjct: 378 WLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESL 437
Query: 153 RGGHRVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRGDAL 212
G+R+ATVL Y++ + GG TVF A+ + + P + DAL
Sbjct: 438 GTGNRIATVLFYMSQPSHGGGTVFTEAKST---------------------ILPTKNDAL 476
Query: 213 LFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIH 247
+ +L+ + + HA CPV+ G KW + KWIH
Sbjct: 477 FWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIH 511
>P4H2_HUMAN (O15460) Prolyl 4-hydroxylase alpha-2 subunit precursor
(EC 1.14.11.2) (4-PH alpha-2)
(Procollagen-proline,2-oxoglutarate-4-dioxygenase
alpha-2 subunit) (UNQ290/PRO330)
Length = 535
Score = 101 bits (251), Expect = 3e-21
Identities = 68/235 (28%), Positives = 111/235 (46%), Gaps = 28/235 (11%)
Query: 17 LICKIHFALGSYAGTSAIIDPTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSA 76
L C+ H G+ A +I P K + P Y ++D E + + IAK +L R+
Sbjct: 309 LFCRYHH--GNRA-PQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARAT 365
Query: 77 VADNLSGESKLSEVRTSSGMFISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQ 136
V D +G ++ R S ++ ++ D +V+ + ++ T L + E +QV Y G
Sbjct: 366 VRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGG 425
Query: 137 KYDPHYDYF----ADKVNIARGGHRVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDE 192
+Y+PH+D+ D G+RVAT L Y+++V GG TVFP+
Sbjct: 426 QYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPDL------------- 472
Query: 193 DLSECGKKGVAVNPRRGDALLFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIH 247
G A+ P++G A+ + +L + D + HA CPV+ G KW + KW H
Sbjct: 473 --------GAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFH 519
>P4H2_MOUSE (Q60716) Prolyl 4-hydroxylase alpha-2 subunit precursor
(EC 1.14.11.2) (4-PH alpha-2)
(Procollagen-proline,2-oxoglutarate-4-dioxygenase
alpha-2 subunit)
Length = 537
Score = 100 bits (249), Expect = 4e-21
Identities = 63/218 (28%), Positives = 104/218 (46%), Gaps = 25/218 (11%)
Query: 34 IIDPTKVKQVSWKPRAFVYKGFLTDLECDHLISIAKSELKRSAVADNLSGESKLSEVRTS 93
+I P K + P Y ++D E + + IAK +L R+ V D +G ++ R S
Sbjct: 325 LIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVS 384
Query: 94 SGMFISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYF----ADKV 149
++ ++ D +V+ + ++ T L + E +QV Y G +Y+PH+D+ D
Sbjct: 385 KSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAF 444
Query: 150 NIARGGHRVATVLMYLTNVTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRG 209
G+RVAT L Y+++V GG TVFP+ G A+ P++G
Sbjct: 445 KRLGTGNRVATFLNYMSDVEAGGATVFPDL---------------------GAAIWPKKG 483
Query: 210 DALLFCSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIH 247
A+ + +L + D + HA CPV+ G KW + KW H
Sbjct: 484 TAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFH 521
Score = 35.0 bits (79), Expect = 0.23
Identities = 25/78 (32%), Positives = 32/78 (40%), Gaps = 4/78 (5%)
Query: 165 LTNVTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRGDALLFCSLHPNAIPD 224
L+N T G N E P L E D S C +GV + PRR L H N +P
Sbjct: 264 LSNQTDAGLATQENLYERPTDYLPERDVYESLCRGEGVKLTPRRQKKLFCRYHHGNRVPQ 323
Query: 225 TLSLHAGCPVIEGEKWSA 242
L P E ++W +
Sbjct: 324 LLI----APFKEEDEWDS 337
>EGLX_MOUSE (Q8BG58) Putative HIF-prolyl hydroxylase PH-4 (EC
1.14.11.-) (Hypoxia-inducible factor prolyl
4-hydroxylase)
Length = 503
Score = 76.3 bits (186), Expect = 9e-14
Identities = 52/153 (33%), Positives = 69/153 (44%), Gaps = 25/153 (16%)
Query: 122 ENGEDIQVLRYEHGQKYDPHYD--------------YFADKVNIARGGHRVATVLMYLTN 167
E E +QV+RY G Y H D A++ R TVL YL N
Sbjct: 310 EFSEPLQVVRYGEGGHYHAHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNN 369
Query: 168 VTKGGETVFPNAEESPRHKLSETDEDLS------ECGKKGVAVNPRRGDALLFCSLHPN- 220
VT GGETVFP A+ ++S +D+ C K + V P++G A+ + + P+
Sbjct: 370 VTGGGETVFPVADNRTYDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDG 429
Query: 221 ----AIPDTLSLHAGCPVIEGEKWSATKWIHVD 249
D SLH GC V G KW A WI+VD
Sbjct: 430 QGWVGEVDDYSLHGGCLVTRGTKWIANNWINVD 462
Score = 31.6 bits (70), Expect = 2.5
Identities = 18/55 (32%), Positives = 31/55 (55%), Gaps = 1/55 (1%)
Query: 40 VKQVSWKPRAFVYKGFLTDLECDHLISIAKSE-LKRSAVADNLSGESKLSEVRTS 93
++ +S KP F GFL+D EC +I +A+ + L+RS + E +S ++ S
Sbjct: 136 IRTLSLKPLLFEIPGFLSDEECRLIIHLAQMKGLQRSQILPTEEYEEAMSAMQVS 190
>EGLX_HUMAN (Q9NXG6) Putative HIF-prolyl hydroxylase PH-4 (EC
1.14.11.-) (Hypoxia-inducible factor prolyl
4-hydroxylase)
Length = 502
Score = 76.3 bits (186), Expect = 9e-14
Identities = 52/153 (33%), Positives = 69/153 (44%), Gaps = 25/153 (16%)
Query: 122 ENGEDIQVLRYEHGQKYDPHYD--------------YFADKVNIARGGHRVATVLMYLTN 167
E E +QV+RY G Y H D A++ R TVL YL N
Sbjct: 309 ELSEPLQVVRYGEGGHYHAHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNN 368
Query: 168 VTKGGETVFPNAEESPRHKLSETDEDLS------ECGKKGVAVNPRRGDALLFCSLHPN- 220
VT GGETVFP A+ ++S +D+ C K + V P++G A+ + + P+
Sbjct: 369 VTGGGETVFPVADNRTYDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDG 428
Query: 221 ----AIPDTLSLHAGCPVIEGEKWSATKWIHVD 249
D SLH GC V G KW A WI+VD
Sbjct: 429 QGWVGDVDDYSLHGGCLVTRGTKWIANNWINVD 461
Score = 33.1 bits (74), Expect = 0.86
Identities = 19/55 (34%), Positives = 31/55 (55%), Gaps = 1/55 (1%)
Query: 40 VKQVSWKPRAFVYKGFLTDLECDHLISIAKSE-LKRSAVADNLSGESKLSEVRTS 93
++ +S KP F GFLTD EC +I +A+ + L+RS + E +S ++ S
Sbjct: 135 IRTLSLKPLLFEIPGFLTDEECRLIIHLAQMKGLQRSQILPTEEYEEAMSTMQVS 189
>YTQJ_CAEEL (Q19673) Hypothetical tyrosinase-like protein F21C3.2 in
chromosome I
Length = 813
Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 7/43 (16%)
Query: 259 GDCTDQHESCERWAALGECTKNPEYMVGTSGLPGYCRKSCKTC 301
G C D H C WA GEC KN +P CR+SC TC
Sbjct: 752 GPCADYHYDCAAWARRGECLKN-------KWMPENCRRSCNTC 787
Score = 43.1 bits (100), Expect = 8e-04
Identities = 17/42 (40%), Positives = 24/42 (56%), Gaps = 6/42 (14%)
Query: 260 DCTDQHESCERWAALGECTKNPEYMVGTSGLPGYCRKSCKTC 301
+C+D+H +C W+ GEC KNP +M CR SC+ C
Sbjct: 635 ECSDRHTNCAMWSRSGECNKNPLWMSEN------CRSSCQKC 670
Score = 40.8 bits (94), Expect = 0.004
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 261 CTDQHESCERWAALGECTKNPEYMVGTSGLPGYCRKSCKTC 301
C +++E C W+A GEC KNP YM +C+ SC+ C
Sbjct: 592 CFNENECCGPWSAKGECQKNPVYM------NVWCKASCRQC 626
Score = 33.1 bits (74), Expect = 0.86
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Query: 261 CTDQHESCERWAALGECTKNPEYMVGTSGLPGYCRKSCKTC 301
C ++ + C WA G+C NP YM C+ SC C
Sbjct: 711 CYNEDQCCPIWAQRGQCRSNPGYMT------CQCKVSCGVC 745
>RBP2_PLAVB (Q00799) Reticulocyte binding protein 2 precursor
(PvRBP-2)
Length = 2867
Score = 35.0 bits (79), Expect = 0.23
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Query: 55 FLTDLECDHLISIAKSEL--KRSAVADNLSGESKLSEVRTSSGMFISKNKDAIVSGIEDK 112
+L D+E + K EL K N+ ES++ V T S I+K +D I+ IE
Sbjct: 1510 YLKDIEDAEKQASTKVELFHKHETTISNIFKESEILGVETKSQKKINKAED-IMKEIERH 1568
Query: 113 ISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFAD------KVNIARGGHRVATVLMYLT 166
S K E++ L H YD D + KV I V L +T
Sbjct: 1569 NSEIQTQVKGFQENLNKLNEPHN--YDNAEDELNNDKSTNAKVLIETNLESVKHNLSEIT 1626
Query: 167 NVTKGGETVFPNAEESPRHKLSETDEDLSE 196
N+ +GGE ++ A++ K+ T E+ +E
Sbjct: 1627 NIKQGGEKIYSKAKDI-MQKIKATSENTAE 1655
>YKH1_CAEEL (P34269) Hypothetical tyrosinase-like protein C02C2.1 in
chromosome III
Length = 601
Score = 34.7 bits (78), Expect = 0.30
Identities = 15/42 (35%), Positives = 20/42 (46%), Gaps = 6/42 (14%)
Query: 260 DCTDQHESCERWAALGECTKNPEYMVGTSGLPGYCRKSCKTC 301
+C ++ C +W+ EC N YM YCRKSC C
Sbjct: 479 NCYNEDPCCNQWSRQNECRTNTVYM------NRYCRKSCGLC 514
>HBA_EUDCR (P10057) Hemoglobin alpha chain
Length = 141
Score = 31.2 bits (69), Expect = 3.3
Identities = 20/70 (28%), Positives = 28/70 (39%)
Query: 98 ISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKVNIARGGHR 157
+S N + V G+ KISS + Y + Y PH+D + G +
Sbjct: 2 LSANDKSNVKGVFSKISSHAEEYGAETLERMFTTYPQTKTYFPHFDLHHGSAQVKAHGKK 61
Query: 158 VATVLMYLTN 167
VAT LM N
Sbjct: 62 VATALMEAAN 71
>CIB1_RAT (Q00954) Sodium channel beta-1 subunit precursor
Length = 218
Score = 30.8 bits (68), Expect = 4.3
Identities = 18/61 (29%), Positives = 32/61 (51%), Gaps = 2/61 (3%)
Query: 111 DKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKV--NIARGGHRVATVLMYLTNV 168
+ + WTF K E +++LRYE+ + F +V N +RG + + +++TNV
Sbjct: 52 ETFTEWTFRQKGTEEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNV 111
Query: 169 T 169
T
Sbjct: 112 T 112
>CIB1_RABIT (P53788) Sodium channel beta-1 subunit precursor
Length = 218
Score = 30.8 bits (68), Expect = 4.3
Identities = 18/61 (29%), Positives = 32/61 (51%), Gaps = 2/61 (3%)
Query: 111 DKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKV--NIARGGHRVATVLMYLTNV 168
+ + WTF K E +++LRYE+ + F +V N +RG + + +++TNV
Sbjct: 52 ETFTEWTFRQKGTEEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNV 111
Query: 169 T 169
T
Sbjct: 112 T 112
>CIB1_MOUSE (P97952) Sodium channel beta-1 subunit precursor
Length = 218
Score = 30.8 bits (68), Expect = 4.3
Identities = 18/61 (29%), Positives = 32/61 (51%), Gaps = 2/61 (3%)
Query: 111 DKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKV--NIARGGHRVATVLMYLTNV 168
+ + WTF K E +++LRYE+ + F +V N +RG + + +++TNV
Sbjct: 52 ETFTEWTFRQKGTEEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNV 111
Query: 169 T 169
T
Sbjct: 112 T 112
>CIB1_HUMAN (Q07699) Sodium channel beta-1 subunit precursor
Length = 218
Score = 30.8 bits (68), Expect = 4.3
Identities = 18/61 (29%), Positives = 32/61 (51%), Gaps = 2/61 (3%)
Query: 111 DKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFADKV--NIARGGHRVATVLMYLTNV 168
+ + WTF K E +++LRYE+ + F +V N +RG + + +++TNV
Sbjct: 52 ETFTEWTFRQKGTEEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNV 111
Query: 169 T 169
T
Sbjct: 112 T 112
>YOW6_CAEEL (P30652) Hypothetical protein ZK643.6 in chromosome III
Length = 180
Score = 30.4 bits (67), Expect = 5.6
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 253 KTVGAGGDCTDQHESCERWAALGECTKNPEYMVGTSGLPGYCRKSCKTC 301
KT A C D ++ C W G C+K V S C KSC C
Sbjct: 136 KTCNACNICEDANKMCPIWVPRGFCSKFDHDKVQKS-----CAKSCNIC 179
>YG2D_YEAST (P53246) Hypothetical 98.1 kDa protein in ROM1-UPF3
intergenic region
Length = 860
Score = 30.4 bits (67), Expect = 5.6
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 168 VTKGGETVFPNAEESPRHKLSETDEDLSECGKKGVAVNPRRGDALLFCSLHPNAIPDTLS 227
VT + N++ S H S +ED E + + + + G+ +L +HP
Sbjct: 13 VTLEDNEIINNSDHSSSHSTSHEEEDEEEDDTEDIELIEKDGNKILSSRIHPEDEIINDG 72
Query: 228 LHAGCPVIEGEKWSATKWIHVDSFDK 253
L+ PV +K A W H + +K
Sbjct: 73 LNIWIPVQMLKKNIAKFWSHFLAIEK 98
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,827,227
Number of Sequences: 164201
Number of extensions: 1669090
Number of successful extensions: 3741
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3699
Number of HSP's gapped (non-prelim): 32
length of query: 301
length of database: 59,974,054
effective HSP length: 110
effective length of query: 191
effective length of database: 41,911,944
effective search space: 8005181304
effective search space used: 8005181304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Medicago: description of AC146553.10