BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146551.5 + phase: 0
(606 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TAF1_TOBAC (Q99142) Transcriptional activator TAF-1 (Fragment) 39 0.051
ZBT5_MOUSE (Q7TQG0) Zinc finger and BTB domain containing protein 5 38 0.067
ZBT5_HUMAN (O15062) Zinc finger and BTB domain containing protein 5 38 0.067
ZB10_RAT (Q9WTY8) Zinc finger and BTB domain containing protein ... 37 0.15
ZB10_HUMAN (Q96DT7) Zinc finger and BTB domain containing protei... 36 0.33
NCAP_CVMDV (Q83360) Nucleocapsid protein (N structural protein) ... 34 1.3
RTOA_DICDI (P54681) Protein rtoA (Ratio-A) 33 2.2
IAAU_ARATH (Q9M1R4) Putative auxin-responsive protein IAA30 (Put... 33 2.2
ZB34_HUMAN (Q8NCN2) Zinc finger and BTB domain containing protei... 33 2.8
PCN2_CHVP1 (O41056) Proliferating cell nuclear antigen homolog A... 33 2.8
LON_BORBU (Q59185) ATP-dependent protease La (EC 3.4.21.53) 33 2.8
BTB5_HUMAN (Q9NXS3) BTB/POZ domain containing protein 5 33 2.8
BRD3_HUMAN (Q15059) Bromodomain-containing protein 3 (RING3-like... 33 2.8
1433_DICDI (P54632) 14-3-3-like protein 33 2.8
BTB5_MOUSE (Q9CR40) BTB/POZ domain containing protein 5 32 3.7
RRPO_BOOLV (Q992J0) RNA-directed RNA polymerase (EC 2.7.7.48) (R... 32 4.8
FUMC_CAMJE (O69294) Fumarate hydratase class II (EC 4.2.1.2) (Fu... 32 4.8
Y338_MYCGE (P47580) Hypothetical lipoprotein MG338 precursor 32 6.3
DCDA_BUCAP (Q8K9C4) Diaminopimelate decarboxylase (EC 4.1.1.20) ... 32 6.3
BTB6_MOUSE (Q8K2J9) BTB/POZ domain containing protein 6 32 6.3
>TAF1_TOBAC (Q99142) Transcriptional activator TAF-1 (Fragment)
Length = 265
Score = 38.5 bits (88), Expect = 0.051
Identities = 39/163 (23%), Positives = 66/163 (39%), Gaps = 25/163 (15%)
Query: 405 SHDGLYRAIDTYLKEHP-GISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVL 463
+H G+Y + HP G ++ Q MD LS+DAS + +N
Sbjct: 1 AHGGVYAHPGVPIGSHPPGHGMATSPAVSQAMDGASLSLDASAKSSENS----------- 49
Query: 464 HFEQVRTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPE---YDTDGAGTAEELKALR 520
++ A S G + D +G D +G+S+SG T DT+GAG +E K
Sbjct: 50 --DRGLLAMSLGNGSADNIEGGAD-----HGNSQSGDTEDSTDGSDTNGAGVSERSKKRS 102
Query: 521 KELASLRQSNGVGNSFK---DGDAKPNMDKAVIGKMKGLLKSK 560
+E + + + G+ + +KA++ G + K
Sbjct: 103 RETTPDNSGDSKSHLRRCQPTGEINDDSEKAIVAVRPGKVGEK 145
>ZBT5_MOUSE (Q7TQG0) Zinc finger and BTB domain containing protein 5
Length = 670
Score = 38.1 bits (87), Expect = 0.067
Identities = 23/89 (25%), Positives = 43/89 (47%), Gaps = 1/89 (1%)
Query: 12 DIIVSIGDTKFYLHKFPLISKSSHLQKLISL-NNEENINEIQISDIPGGASAFEICAKFC 70
D ++ +G+ F H+ L + S+H + L S+ ++ +N IQ+ A AF
Sbjct: 25 DCVIVVGNRHFKAHRSVLAACSTHFRALFSVAEGDQTMNMIQLDSEVVTAEAFAALIDMM 84
Query: 71 YGMTVTLNAYNVIATRCAAEYLGMHENIE 99
Y T+ L NV+ AA +L ++ ++
Sbjct: 85 YTSTLMLGESNVMDVLLAASHLHLNSVVK 113
>ZBT5_HUMAN (O15062) Zinc finger and BTB domain containing protein 5
Length = 677
Score = 38.1 bits (87), Expect = 0.067
Identities = 23/89 (25%), Positives = 43/89 (47%), Gaps = 1/89 (1%)
Query: 12 DIIVSIGDTKFYLHKFPLISKSSHLQKLISL-NNEENINEIQISDIPGGASAFEICAKFC 70
D ++ +G+ F H+ L + S+H + L S+ ++ +N IQ+ A AF
Sbjct: 25 DCVIVVGNRHFKAHRSVLAACSTHFRALFSVAEGDQTMNMIQLDSEVVTAEAFAALIDMM 84
Query: 71 YGMTVTLNAYNVIATRCAAEYLGMHENIE 99
Y T+ L NV+ AA +L ++ ++
Sbjct: 85 YTSTLMLGESNVMDVLLAASHLHLNSVVK 113
>ZB10_RAT (Q9WTY8) Zinc finger and BTB domain containing protein 10
(Zinc finger protein RIN ZF)
Length = 836
Score = 37.0 bits (84), Expect = 0.15
Identities = 22/93 (23%), Positives = 42/93 (44%), Gaps = 1/93 (1%)
Query: 8 ELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGA-SAFEIC 66
++ D+ + + F HK L++ S + L ++N+E+ N+ + + A F +
Sbjct: 327 DILCDVSIVVSGKIFKAHKNILVAGSRFFKTLYCVSNKESPNQNNTTHLDIAAVQGFSVI 386
Query: 67 AKFCYGMTVTLNAYNVIATRCAAEYLGMHENIE 99
F Y + L + N I A YL M E ++
Sbjct: 387 LDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQ 419
>ZB10_HUMAN (Q96DT7) Zinc finger and BTB domain containing protein
10 (Zinc finger protein RIN ZF)
Length = 847
Score = 35.8 bits (81), Expect = 0.33
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 12 DIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGA-SAFEICAKFC 70
D+ + + F HK L++ S + L +N+E+ N+ + + A F + F
Sbjct: 365 DVSIVVSGKIFKAHKNILVAGSRFFKTLYCFSNKESPNQNNTTHLDIAAVQGFSVILDFL 424
Query: 71 YGMTVTLNAYNVIATRCAAEYLGMHENIE 99
Y + L + N I A YL M E ++
Sbjct: 425 YSGNLVLTSQNAIEVMTVASYLQMSEVVQ 453
>NCAP_CVMDV (Q83360) Nucleocapsid protein (N structural protein)
(NC)
Length = 455
Score = 33.9 bits (76), Expect = 1.3
Identities = 39/151 (25%), Positives = 59/151 (38%), Gaps = 10/151 (6%)
Query: 443 DASLH-AVQNERLPTRVIVQVLHFEQVRTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTT 501
D S H A+ P V+ Q + E SG S P G + S GSN +RS +
Sbjct: 168 DPSSHEAIPTRFAPGTVLPQGFYVE------GSGRSAPASRSGSRSQSRGSNNRARSSSN 221
Query: 502 NPE-YDTDGAGTAEELKALRKELASLRQSNGVGNSFKDGDAKPNMDKAVIGKMKGLLKSK 560
+ T AEE+ AL LA L + G AK K + + +K
Sbjct: 222 QRQPASTVKPDMAEEIAAL--VLAKLGKDAGQPKQVTKQSAKEVRQKILNKPRQKRTPNK 279
Query: 561 KSFIKLWASKGGHGENSGSDSSESIGSVNPE 591
+ ++ K G +N G +G+ +P+
Sbjct: 280 QCPVQQCFGKRGPNQNFGGSEMLKLGTSDPQ 310
>RTOA_DICDI (P54681) Protein rtoA (Ratio-A)
Length = 400
Score = 33.1 bits (74), Expect = 2.2
Identities = 30/128 (23%), Positives = 45/128 (34%), Gaps = 3/128 (2%)
Query: 473 SSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGV 532
+SG+S + GS GS+ S + + TD + + + S + S G
Sbjct: 124 ASGSSNSGSQSSTDSSNSGSQGSTGSSNSGSQSSTDSSNSGSQSSTDSSNSGS-QGSTGS 182
Query: 533 GNSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEE 592
NS + N G +S + NSGS+SS GS N
Sbjct: 183 SNSGSESSGSSNSGSESSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSS--GSSNSGS 240
Query: 593 VKSTPSRN 600
S+ S N
Sbjct: 241 ESSSGSSN 248
>IAAU_ARATH (Q9M1R4) Putative auxin-responsive protein IAA30
(Putative indoleacetic acid-induced protein 30)
Length = 172
Score = 33.1 bits (74), Expect = 2.2
Identities = 28/86 (32%), Positives = 45/86 (51%), Gaps = 10/86 (11%)
Query: 474 SGTSTPDIAKGIK-DLSIGSN-GSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNG 531
S ++T +++ ++ LS GS+ G +G N EYD G G AEE+ + +E + N
Sbjct: 24 SSSNTRNLSTDLRLGLSFGSSSGQYYNGGDNHEYD--GVGAAEEMMIMEEE--EQNECNS 79
Query: 532 VGNSFKDGDAKPNMDKAVIGKMKGLL 557
VG+ + K NM+ IG+ LL
Sbjct: 80 VGSFY----VKVNMEGVPIGRKIDLL 101
>ZB34_HUMAN (Q8NCN2) Zinc finger and BTB domain containing protein
34
Length = 500
Score = 32.7 bits (73), Expect = 2.8
Identities = 25/89 (28%), Positives = 41/89 (45%), Gaps = 4/89 (4%)
Query: 12 DIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASAFEICAKFCY 71
DIIV I F HK L + S + + +L+ ++ I + + FE FCY
Sbjct: 33 DIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKN----PNVFEQLLSFCY 88
Query: 72 GMTVTLNAYNVIATRCAAEYLGMHENIEK 100
++L +V++ AA +L M I+K
Sbjct: 89 TGRMSLQLKDVVSFLTAASFLQMQCVIDK 117
>PCN2_CHVP1 (O41056) Proliferating cell nuclear antigen homolog
A574L
Length = 264
Score = 32.7 bits (73), Expect = 2.8
Identities = 31/150 (20%), Positives = 68/150 (44%), Gaps = 14/150 (9%)
Query: 154 CVDVSKVDWSYTYNRKKLPEENGFESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNI 213
CV ++ S+TY+ P+E +S + + + + + ++ E+++D+ +NI
Sbjct: 95 CVGNDEITISFTYDN---PDELIVKSEYSDFKMKTIDIETEEMEIPEMDIDVLIDADSNI 151
Query: 214 KTKEIQSNDVIGEALKAYAYRKLPNF-SKGMIPCEDVSKHRLIVETIVKLLPSDKGSVSC 272
K +++ G+ +K Y + + + G I D+ H VE KG ++C
Sbjct: 152 IQKYLKNMAGFGDTVKIYTQDDVVHMKTAGEIGEVDLQIHDQRVEI--------KGRLTC 203
Query: 273 RFLVKLLKAVIFVESEDRIRDVLVKRIGQQ 302
F + L + F ++ + V++K + Q
Sbjct: 204 EFATRYL--MTFAKAAGISKRVVIKLLDDQ 231
>LON_BORBU (Q59185) ATP-dependent protease La (EC 3.4.21.53)
Length = 806
Score = 32.7 bits (73), Expect = 2.8
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 201 LEVDMYKSVITNIKTKEIQSNDVIGEAL----KAYAYRKLPNFSKGMIPCEDVSKHRLIV 256
+E+D K + ++ +IQS V G L + +A+RK+P M+ ED K IV
Sbjct: 143 IEIDYLKQI--PVRKDDIQSKAVYGSILLRTKEIFAHRKMPEVQLNMVNIEDKGKLCDIV 200
Query: 257 ETIVKLLPSDKGSVSCRFLVK-LLKAVIFVESED----RIRDVLVKRIGQQLEE 305
+ + +D V VK LK V+ + E+ I++ + K I ++LE+
Sbjct: 201 ASTISSSKNDHQIVLETLNVKDRLKKVLELIYEELNLIEIQNKIAKGIQERLEK 254
>BTB5_HUMAN (Q9NXS3) BTB/POZ domain containing protein 5
Length = 571
Score = 32.7 bits (73), Expect = 2.8
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 12 DIIVSIGDTKFYLHKFPLISKSSHLQKLISLN-NEENINEIQISDIPGGASAFEICAKFC 70
DII+ +GD K + HK L S S + + + + N +E+ +E++ I +A + ++
Sbjct: 36 DIILRVGDVKIHAHKVVLASVSPYFKAMFTGNLSEKENSEVEFQCI--DETALQAIVEYA 93
Query: 71 YGMTVTLNAYNVIATRCAAEYL 92
Y TV ++ V + AA L
Sbjct: 94 YTGTVFISQDTVESLLPAANLL 115
>BRD3_HUMAN (Q15059) Bromodomain-containing protein 3 (RING3-like
protein)
Length = 726
Score = 32.7 bits (73), Expect = 2.8
Identities = 21/66 (31%), Positives = 35/66 (52%), Gaps = 2/66 (3%)
Query: 466 EQVRTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYD--TDGAGTAEELKALRKEL 523
E V A + P ++KG + SS SG+++ E + T A E+LKA+ ++L
Sbjct: 418 EPVEAPALPAPAAPMVSKGAESSRSSEESSSDSGSSDSEEERATRLAELQEQLKAVHEQL 477
Query: 524 ASLRQS 529
A+L Q+
Sbjct: 478 AALSQA 483
>1433_DICDI (P54632) 14-3-3-like protein
Length = 252
Score = 32.7 bits (73), Expect = 2.8
Identities = 24/118 (20%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 125 LLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQNGV 184
+++T K ++ LD E V R + S+A K + + W + ++ E G E++ +
Sbjct: 22 MVETMKKVAELDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNENHVKKI 81
Query: 185 RTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKG 242
+ + + D+C +++ +S + I + + V +K +R L F+ G
Sbjct: 82 KEYKCKVEKELTDICNDILEVLESHL--IVSSASGESKVFYYKMKGDYFRYLAEFATG 137
>BTB5_MOUSE (Q9CR40) BTB/POZ domain containing protein 5
Length = 571
Score = 32.3 bits (72), Expect = 3.7
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 12 DIIVSIGDTKFYLHKFPLISKSSHLQKLISLN-NEENINEIQISDIPGGASAFEICAKFC 70
DII+ +GD K + HK L S S + + + + N +E+ +E++ I +A + ++
Sbjct: 36 DIILRVGDVKIHAHKVVLASISPYFKAMFTGNLSEKENSEVEFQCI--DEAALQAIVEYA 93
Query: 71 YGMTVTLNAYNVIATRCAAEYL 92
Y TV ++ V + AA L
Sbjct: 94 YTGTVFISQDTVESLLPAANLL 115
>RRPO_BOOLV (Q992J0) RNA-directed RNA polymerase (EC 2.7.7.48)
(RdRp) (RNA replicase) (Protein A)
Length = 998
Score = 32.0 bits (71), Expect = 4.8
Identities = 23/77 (29%), Positives = 35/77 (44%), Gaps = 2/77 (2%)
Query: 469 RTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELA-SLR 527
+T G + + + + L+ S SGT+ P G+GT EL K+ A R
Sbjct: 879 QTIDEEGVAPGSVDESLLKLNDAKQTRSNSGTSGPHTKGGGSGTGNELPRSTKQRAKGPR 938
Query: 528 QSNGVGNSFKDGDAKPN 544
QS G+ K ++KPN
Sbjct: 939 QSAGLPKQGK-ANSKPN 954
>FUMC_CAMJE (O69294) Fumarate hydratase class II (EC 4.2.1.2)
(Fumarase C)
Length = 463
Score = 32.0 bits (71), Expect = 4.8
Identities = 27/101 (26%), Positives = 45/101 (43%), Gaps = 11/101 (10%)
Query: 351 ELEGIRKPGI--LSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDG 408
E +GI K G L DA+ L +A+ GYL+ + + + L EL +
Sbjct: 176 EFDGIIKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASLPTLRELAIGGT------ 229
Query: 409 LYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAV 449
A+ T L HP +S+ + + QL+ + +S HA+
Sbjct: 230 ---AVGTGLNAHPELSQKVSEELTQLIGTKFISSPNKFHAL 267
>Y338_MYCGE (P47580) Hypothetical lipoprotein MG338 precursor
Length = 1271
Score = 31.6 bits (70), Expect = 6.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 93 GMHENIEKGNLLFKIDVFLSSSIFRSWKDSIILLQTTKSMSPLDE 137
G N K N+ F +D+F S+S FRSW + L+ +++ + E
Sbjct: 529 GQTNNFSKDNVSFSVDLFGSNSEFRSWANRNTTLKLYTALTTMLE 573
>DCDA_BUCAP (Q8K9C4) Diaminopimelate decarboxylase (EC 4.1.1.20)
(DAP decarboxylase)
Length = 415
Score = 31.6 bits (70), Expect = 6.3
Identities = 39/171 (22%), Positives = 68/171 (38%), Gaps = 37/171 (21%)
Query: 311 ILIKAPDGEITMYDVGIVQK---IVREF-----------------LMKDHNSEIELVGGG 350
ILIK +YD I+ K +++EF LMK N +++ V G
Sbjct: 19 ILIKKFQSPFWVYDSNIIHKKINLLKEFDIVRFAQKACSNIHILRLMKQKNIKVDAVSLG 78
Query: 351 ELEGIRKPGILSDASKLM-VAKLIDGYLAEIAKDPNLPL-LNFVNLAELVSRISRPSHDG 408
E+E G ++++++ A L D D +P+ +++ E + ++S P H
Sbjct: 79 EIERALVAGFKPNSNEIIFTADLFDEETLSKVIDFKIPVNAGSIDMLEQLGKLS-PGH-- 135
Query: 409 LYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVI 459
+L+ +PG G K + S H + N RL +I
Sbjct: 136 -----HVWLRINPGFGHGHSKK-------TNTGGENSKHGIWNPRLAIPII 174
>BTB6_MOUSE (Q8K2J9) BTB/POZ domain containing protein 6
Length = 410
Score = 31.6 bits (70), Expect = 6.3
Identities = 44/152 (28%), Positives = 69/152 (44%), Gaps = 20/152 (13%)
Query: 7 SELASDIIVSIGDT----KFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASA 62
+EL +D+ +G + HK+ L SS + + E +EI I D+ +A
Sbjct: 4 NELMADVHFIVGALGAARRVPAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIPDVE--PAA 61
Query: 63 FEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDV-FLSSSIFRSWKD 121
F + K+ Y + L A V+AT AA+ + L K V FL +S+ K+
Sbjct: 62 FLVLLKYMYSDEIDLEADTVLATLYAAKKYIV-------PALAKACVNFLETSL--EAKN 112
Query: 122 SIILLQTTKSMSPLDEEQKVVNRCIESIANKA 153
+ +LL S S L EE ++ RC E I +A
Sbjct: 113 ACVLL----SQSRLFEEPELTQRCWEVIDAQA 140
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.133 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,119,379
Number of Sequences: 164201
Number of extensions: 2940528
Number of successful extensions: 6555
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 6546
Number of HSP's gapped (non-prelim): 32
length of query: 606
length of database: 59,974,054
effective HSP length: 116
effective length of query: 490
effective length of database: 40,926,738
effective search space: 20054101620
effective search space used: 20054101620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)
Medicago: description of AC146551.5