BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146548.14 - phase: 0
(180 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABC2_MOUSE (P41234) ATP-binding cassette, sub-family A, member 2... 132 6e-31
ABC2_HUMAN (Q9BZC7) ATP-binding cassette, sub-family A, member 2... 132 6e-31
ABC2_RAT (Q9ESR9) ATP-binding cassette, sub-family A, member 2 (... 130 2e-30
ABC3_HUMAN (Q99758) ATP-binding cassette, sub-family A, member 3... 127 1e-29
ABC1_HUMAN (O95477) ATP-binding cassette, sub-family A, member 1... 124 9e-29
ABC1_MOUSE (P41233) ATP-binding cassette, sub-family A, member 1... 124 1e-28
ABC3_MOUSE (Q8R420) ATP-binding cassette, sub-family A, member 3 123 3e-28
AB12_HUMAN (Q86UK0) ATP-binding cassette, sub-family A, member 1... 122 6e-28
ABCR_MOUSE (O35600) Retinal-specific ATP-binding cassette transp... 118 8e-27
ABCR_HUMAN (P78363) Retinal-specific ATP-binding cassette transp... 118 8e-27
CED7_CAEEL (P34358) ABC transporter ced-7 (Cell death protein 7) 100 1e-21
NODI_RHILO (P23703) Nod factor export ATP-binding protein I (Nod... 81 1e-15
NODI_RHIS3 (P72335) Nod factor export ATP-binding protein I (Nod... 81 1e-15
NODI_BRAJA (P26050) Nod factor export ATP-binding protein I (Nod... 80 2e-15
NDI2_RHIME (Q8GNH6) Nod factor export ATP-binding protein I (Nod... 80 3e-15
NDI1_RHIME (O52618) Nod factor export ATP-binding protein I (Nod... 79 4e-15
NODI_RHILV (P08720) Nod factor export ATP-binding protein I (Nod... 79 7e-15
NODI_BRASS (Q9Z3I3) Nod factor export ATP-binding protein I (Nod... 78 1e-14
NODI_RHISN (P55476) Nod factor export ATP-binding protein I (Nod... 77 2e-14
NODI_RHIGA (P50332) Nod factor export ATP-binding protein I (Nod... 76 5e-14
>ABC2_MOUSE (P41234) ATP-binding cassette, sub-family A, member 2
(ATP-binding cassette transporter 2) (ATP-binding
cassette 2)
Length = 2434
Score = 132 bits (331), Expect = 6e-31
Identities = 71/173 (41%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVI-KLAKQDRAIILTTHSMEEADA 60
KR+LS AI+LIG P +++DEP+TG+DP +R+ LWN+I L K R+++LT+HSMEE +A
Sbjct: 2192 KRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEA 2251
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAM-TTSSDHEKDVENMVQRLTPNANKIY 119
LC RL I V+G L+C+G + LK R+G Y+ + T SS + KDV R P A
Sbjct: 2252 LCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQNVKDVVRFFNRNFPEAMLKE 2311
Query: 120 HLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVARE 172
+++L E I +A VF +E + + +S TTL++VF+ A++
Sbjct: 2312 RHHTKVQYQLKSEHISLAQVFSKMEQVVGVLGIEDYSVSQTTLDNVFVNFAKK 2364
Score = 112 bits (281), Expect = 4e-25
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 26/203 (12%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
MKR+LSVAI+ +G + + +DEP+ G+DP +R+ +W++I K R I+L+TH M+EAD
Sbjct: 1127 MKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADL 1186
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMT-----------------------TS 97
L DR+ I G L+C G P LKG Y Y + S
Sbjct: 1187 LGDRIAIISHGKLKCCGSPLFLKGAYXDGYRLTLVKQPAEPGTSQEPGLASSPSGCPRLS 1246
Query: 98 SDHEKDVENMVQRLTPNANKIYHLSGTQKFELPKEEIK---MANVFRAIEAAKRNFTVFA 154
S E V +++ ++ + S + LP E +K +F+ +E + + +
Sbjct: 1247 SCSEPQVSQFIRKHVASSLLVSDTSTELSYILPSEAVKKGAFERLFQQLEHSLDALHLSS 1306
Query: 155 WGLSDTTLEDVFIKVAREAQAFD 177
+GL DTTLE+VF+KV+ E Q+ +
Sbjct: 1307 FGLMDTTLEEVFLKVSEEDQSLE 1329
>ABC2_HUMAN (Q9BZC7) ATP-binding cassette, sub-family A, member 2
(ATP-binding cassette transporter 2) (ATP-binding
cassette 2)
Length = 2436
Score = 132 bits (331), Expect = 6e-31
Identities = 71/173 (41%), Positives = 106/173 (61%), Gaps = 2/173 (1%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVI-KLAKQDRAIILTTHSMEEADA 60
KR+LS AI+LIG P +++DEP+TG+DP +R+ LWN+I L K R+++LT+HSMEE +A
Sbjct: 2192 KRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEA 2251
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAM-TTSSDHEKDVENMVQRLTPNANKIY 119
LC RL I V+G L+C+G + LK R+G Y+ + T SS KDV R P A
Sbjct: 2252 LCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQSVKDVVRFFNRNFPEAMLKE 2311
Query: 120 HLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVARE 172
+++L E I +A VF +E + + +S TTL++VF+ A++
Sbjct: 2312 RHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFAKK 2364
Score = 113 bits (282), Expect = 3e-25
Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 26/203 (12%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
MKR+LSVAI+ +G + + +DEP+ G+DP +R+ +W++I K R I+L+TH M+EAD
Sbjct: 1128 MKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADL 1187
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMT-----------------------TS 97
L DR+ I G L+C G P LKG YG Y + S
Sbjct: 1188 LGDRIAIISHGKLKCCGSPLFLKGTYGDGYRLTLVKRPAEPGGPQEPGLASSPPGRAPLS 1247
Query: 98 SDHEKDVENMVQRLTPNANKIYHLSGTQKFELPKEEIK---MANVFRAIEAAKRNFTVFA 154
S E V +++ + + S + LP E K +F+ +E + + +
Sbjct: 1248 SCSELQVSQFIRKHVASCLLVSDTSTELSYILPSEAAKKGAFERLFQHLERSLDALHLSS 1307
Query: 155 WGLSDTTLEDVFIKVAREAQAFD 177
+GL DTTLE+VF+KV+ E Q+ +
Sbjct: 1308 FGLMDTTLEEVFLKVSEEDQSLE 1330
>ABC2_RAT (Q9ESR9) ATP-binding cassette, sub-family A, member 2
(ATP-binding cassette transporter 2) (ATP-binding
cassette 2)
Length = 2434
Score = 130 bits (327), Expect = 2e-30
Identities = 70/173 (40%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVI-KLAKQDRAIILTTHSMEEADA 60
KR+LS AI+LIG P +++DEP+TG+DP +R+ LWN+I L K R+++LT+HSMEE +A
Sbjct: 2192 KRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEA 2251
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAM-TTSSDHEKDVENMVQRLTPNANKIY 119
+C RL I V+G L+C+G + LK R+G Y+ + T SS + KDV R P A
Sbjct: 2252 VCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQNVKDVVRFFNRNFPEAMLKE 2311
Query: 120 HLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVARE 172
+++L E I +A VF +E + + +S TTL++VF+ A++
Sbjct: 2312 RHHTKVQYQLKSEHISLAQVFSKMEHVVGVLGIEDYSVSQTTLDNVFVNFAKK 2364
Score = 114 bits (285), Expect = 1e-25
Identities = 66/203 (32%), Positives = 106/203 (51%), Gaps = 26/203 (12%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
MKR+LSVAI+ +G + + +DEP+ G+DP +R+ +W++I K R I+L+TH M+EAD
Sbjct: 1127 MKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADL 1186
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMT-----------------------TS 97
L DR+ I G L+C G P LKG YG Y + S
Sbjct: 1187 LGDRIAIISHGKLKCCGSPLFLKGAYGDGYRLTLVKRPAEPGTSQEPGMASSPSGRPQLS 1246
Query: 98 SDHEKDVENMVQRLTPNANKIYHLSGTQKFELPKEEIK---MANVFRAIEAAKRNFTVFA 154
+ E V +++ ++ + S + LP E +K +F+ +E + + +
Sbjct: 1247 NCSEMQVSQFIRKHVASSLLVSDTSTELSYILPSEAVKKGAFERLFQQLEHSLDALHLSS 1306
Query: 155 WGLSDTTLEDVFIKVAREAQAFD 177
+GL DTTLE+VF+KV+ E Q+ +
Sbjct: 1307 FGLMDTTLEEVFLKVSEEDQSLE 1329
>ABC3_HUMAN (Q99758) ATP-binding cassette, sub-family A, member 3
(ATP-binding cassette transporter 3) (ATP-binding
cassette 3) (ABC-C transporter)
Length = 1704
Score = 127 bits (319), Expect = 1e-29
Identities = 65/174 (37%), Positives = 102/174 (58%), Gaps = 5/174 (2%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQD-RAIILTTHSMEEADA 60
KR+LS I+LIG+P V+++DEPSTG+DP +R+ LW+ + A++ +AII+T+HSMEE +A
Sbjct: 1520 KRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIIITSHSMEECEA 1579
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHEKDV----ENMVQRLTPNAN 116
LC RL I V G +C+G P+ LK ++G Y S+ +++ + V P +
Sbjct: 1580 LCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKVQSEGQQEALEEFKAFVDLTFPGSV 1639
Query: 117 KIYHLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVA 170
G + LP ++ A VF +E AK + V + +S +LE VF+ A
Sbjct: 1640 LEDEHQGMVHYHLPGRDLSWAKVFGILEKAKEKYGVDDYSVSQISLEQVFLSFA 1693
Score = 121 bits (304), Expect = 8e-28
Identities = 62/173 (35%), Positives = 100/173 (56%), Gaps = 2/173 (1%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
M+R+LS+ I+LI KV+ +DEP++G+D SR+ +W++++ K DR I+LTTH M+EAD
Sbjct: 669 MRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQRQKSDRTIVLTTHFMDEADL 728
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSD-HEKDVENMVQRLTPNANKIY 119
L DR+ I G LQC G LK +YG Y + + +D+ +V PNA
Sbjct: 729 LGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEDISQLVHHHVPNATLES 788
Query: 120 HLSGTQKFELPKEEI-KMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVAR 171
F LP+E + +F +E ++ + ++G S TT+E+VF++V +
Sbjct: 789 SAGAELSFILPRESTHRFEGLFAKLEKKQKELGIASFGASITTMEEVFLRVGK 841
>ABC1_HUMAN (O95477) ATP-binding cassette, sub-family A, member 1
(ATP-binding cassette transporter 1) (ATP-binding
cassette 1) (ABC-1) (Cholesterol efflux regulatory
protein)
Length = 2261
Score = 124 bits (312), Expect = 9e-29
Identities = 64/181 (35%), Positives = 107/181 (58%), Gaps = 3/181 (1%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWN-VIKLAKQDRAIILTTHSMEEADA 60
KR+LS A++LIG P VV++DEP+TG+DP +R+ LWN + + K+ R+++LT+HSMEE +A
Sbjct: 2050 KRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEA 2109
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTY--VFAMTTSSDHEKDVENMVQRLTPNANKI 118
LC R+ I V+G +C+G + LK R+G Y V + S+ K V++ P +
Sbjct: 2110 LCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQDFFGLAFPGSVPK 2169
Query: 119 YHLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVAREAQAFDT 178
+++LP +A +F + +K+ + + +S TTL+ VF+ A++ D
Sbjct: 2170 EKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDH 2229
Query: 179 L 179
L
Sbjct: 2230 L 2230
Score = 108 bits (270), Expect = 7e-24
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 46/219 (21%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
M+R+LSVA++ +G KVV +DEP+ G+DP SR+ +W ++ +Q R IIL+TH M+EAD
Sbjct: 1037 MQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADV 1096
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMT------------------------- 95
L DR+ I G L CVG LK + G Y +
Sbjct: 1097 LGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKED 1156
Query: 96 ----------TSSDHEKD--------VENMVQRLTPNANKIYHLSGTQKFELPKEEIK-- 135
SDHE D + N++++ A + + + LP E K
Sbjct: 1157 SVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEG 1216
Query: 136 -MANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVAREA 173
+F I+ + + ++G+S+TTLE++F+KVA E+
Sbjct: 1217 AFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEES 1255
>ABC1_MOUSE (P41233) ATP-binding cassette, sub-family A, member 1
(ATP-binding cassette transporter 1) (ATP-binding
cassette 1) (ABC-1)
Length = 2261
Score = 124 bits (311), Expect = 1e-28
Identities = 64/181 (35%), Positives = 106/181 (58%), Gaps = 3/181 (1%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWN-VIKLAKQDRAIILTTHSMEEADA 60
KR+LS A++LIG P VV++DEP+TG+DP +R+ LWN + + K+ R+++LT+HSMEE +A
Sbjct: 2050 KRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLTSHSMEECEA 2109
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTY--VFAMTTSSDHEKDVENMVQRLTPNANKI 118
LC R+ I V+G +C+G + LK R+G Y V + S+ K V+ P +
Sbjct: 2110 LCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFGLAFPGSVLK 2169
Query: 119 YHLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVAREAQAFDT 178
+++LP +A +F + +K+ + + +S TTL+ VF+ A++ D
Sbjct: 2170 EKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDH 2229
Query: 179 L 179
L
Sbjct: 2230 L 2230
Score = 108 bits (269), Expect = 9e-24
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 46/219 (21%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
M+R+LSVA++ +G KVV +DEP+ G+DP SR+ +W ++ +Q R IIL+TH M+EAD
Sbjct: 1037 MQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADI 1096
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMT------------------------- 95
L DR+ I G L CVG LK + G Y +
Sbjct: 1097 LGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSCLKKED 1156
Query: 96 ----------TSSDHEKD--------VENMVQRLTPNANKIYHLSGTQKFELPKEEIK-- 135
SDHE D + N++++ A + + + LP E K
Sbjct: 1157 SVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEG 1216
Query: 136 -MANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVAREA 173
+F I+ + + ++G+S+TTLE++F+KVA E+
Sbjct: 1217 AFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEES 1255
>ABC3_MOUSE (Q8R420) ATP-binding cassette, sub-family A, member 3
Length = 1704
Score = 123 bits (308), Expect = 3e-28
Identities = 63/173 (36%), Positives = 100/173 (57%), Gaps = 2/173 (1%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
MKR+LS+ I+LI KV+ +DEP+ G+D SR+ +W++++ K DR ++LTTH M+EAD
Sbjct: 669 MKRKLSIGIALIAGSKVLMLDEPTPGMDAVSRRAIWDLLQQQKSDRTVLLTTHFMDEADL 728
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSD-HEKDVENMVQRLTPNANKIY 119
L DR+ I G LQC G LK +YG Y + + + + +V PNA
Sbjct: 729 LGDRIAILAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEGISQLVHHHVPNAMLES 788
Query: 120 HLSGTQKFELPKEEI-KMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVAR 171
H F LPKE + ++F +E ++ + ++G S TT+E+VF++V +
Sbjct: 789 HAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVGK 841
Score = 121 bits (303), Expect = 1e-27
Identities = 63/174 (36%), Positives = 100/174 (57%), Gaps = 5/174 (2%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQD-RAIILTTHSMEEADA 60
KR+LS I+LIG+P V+++D PSTG+DP +R+ LW+ + A++ +AI++T+HSMEE +A
Sbjct: 1520 KRKLSTGIALIGEPAVIFLDXPSTGMDPVARRLLWDTVARARESGKAIVITSHSMEECEA 1579
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHEKDV----ENMVQRLTPNAN 116
LC RL I V G +C+G P+ LK ++G Y S+ ++D + V P +
Sbjct: 1580 LCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRSEGKQDALEEFKAFVDLTFPGSI 1639
Query: 117 KIYHLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVA 170
+ LP ++ A VF +E AK + V + +S +LE VF+ A
Sbjct: 1640 LEDEHQDMVHYHLPGCDLSWAKVFGILEKAKEKYGVDDYSVSQISLEQVFLSFA 1693
>AB12_HUMAN (Q86UK0) ATP-binding cassette, sub-family A, member 12
(ATP-binding cassette transporter 12) (ATP-binding
cassette 12)
Length = 2595
Score = 122 bits (305), Expect = 6e-28
Identities = 67/187 (35%), Positives = 104/187 (54%), Gaps = 13/187 (6%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
MKR+LS++I+LIG +VV +DEPSTG+DP SR+ +W+VI K R IIL+TH ++EA+
Sbjct: 1483 MKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWDVISKNKTARTIILSTHHLDEAEV 1542
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHEKD---------VENMVQRL 111
L DR+ G L+C G P LK +G Y +T + V M+Q
Sbjct: 1543 LSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNLNANAVCDTMAVTAMIQSH 1602
Query: 112 TPNANKIYHLSGTQKFELPKEEIKMANVF----RAIEAAKRNFTVFAWGLSDTTLEDVFI 167
P A + G + LP K++ + RA++ + + +G+SDTT+E+VF+
Sbjct: 1603 LPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDNGMGDLNIGCYGISDTTVEEVFL 1662
Query: 168 KVAREAQ 174
+ +E+Q
Sbjct: 1663 NLTKESQ 1669
Score = 120 bits (300), Expect = 2e-27
Identities = 65/182 (35%), Positives = 113/182 (61%), Gaps = 7/182 (3%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDR-AIILTTHSMEEADA 60
KR+LS A++LIG P ++ +DEPS+G+DP S++ LW +I Q++ ++ILT+HSMEE +A
Sbjct: 2395 KRKLSTALALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEA 2454
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHEKDVENMVQRLTPNANKIY- 119
LC RL I V+G QC+G + +K R+G + + +++ +E + + + + K Y
Sbjct: 2455 LCTRLAIMVNGKFQCIGSLQHIKSRFGRGFTVKVHL-KNNKVTMETLTKFMQLHFPKTYL 2513
Query: 120 ---HLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVAREAQAF 176
HLS ++ +P +AN+F +E K + + +S TTLE+VFI A++ +++
Sbjct: 2514 KDQHLS-MLEYHVPVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKDQKSY 2572
Query: 177 DT 178
+T
Sbjct: 2573 ET 2574
>ABCR_MOUSE (O35600) Retinal-specific ATP-binding cassette transporter
(ATP-binding cassette, sub-family A, member 4) (RIM ABC
transporter) (RIM protein) (RmP)
Length = 2310
Score = 118 bits (295), Expect = 8e-27
Identities = 61/178 (34%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWN-VIKLAKQDRAIILTTHSMEEADA 60
KR+LS AI+L G P ++ +DEP+TG+DP +R+ LWN ++ + ++ RA++LT+HSMEE +A
Sbjct: 2075 KRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEA 2134
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHE------KDVENMVQRLTPN 114
LC RL I V G+ QC+G + LK ++G Y+ M S + VE Q P
Sbjct: 2135 LCTRLAIMVKGTFQCLGTIQHLKYKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGNFPG 2194
Query: 115 ANKIYHLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVARE 172
+ + +F++P +A +F+ + + K + + + ++ TTL+ VF+ A++
Sbjct: 2195 SVQRERHHSMLQFQVPSS--SLARIFQLLISHKDSLLIEEYSVTQTTLDQVFVNFAKQ 2250
Score = 106 bits (264), Expect = 3e-23
Identities = 69/217 (31%), Positives = 108/217 (48%), Gaps = 42/217 (19%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
M+R+LSVAI+ +GD KVV +DEP++G+DP SR+ +W+++ + R II++TH M+EAD
Sbjct: 1066 MQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADL 1125
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYG--------------------------------- 87
L DR+ I G L C G P LK +G
Sbjct: 1126 LGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGVCSCTSKGFS 1185
Query: 88 ---GTYVFAMTTSSDHEKDVE---NMVQRLTPNANKIYHLSGTQKFELPKEEIKM---AN 138
T V +T + DV+ ++V P A + + F LP + K A+
Sbjct: 1186 TRCPTRVDEITEEQVLDGDVQELMDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYAS 1245
Query: 139 VFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVAREAQA 175
+FR +E + + ++G+SDT LE++F+KV +A A
Sbjct: 1246 LFRELEETLADLGLSSFGISDTPLEEIFLKVTEDAGA 1282
>ABCR_HUMAN (P78363) Retinal-specific ATP-binding cassette transporter
(ATP-binding cassette, sub-family A, member 4) (RIM ABC
transporter) (RIM protein) (RmP) (Stargardt disease
protein)
Length = 2273
Score = 118 bits (295), Expect = 8e-27
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVI-KLAKQDRAIILTTHSMEEADA 60
KR+LS AI+LIG P +V +DEP+TG+DP +R+ LWNVI + ++ RA++LT+HSMEE +A
Sbjct: 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGRAVVLTSHSMEECEA 2135
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHE------KDVENMVQRLTPN 114
LC RL I V G+ +C+G + LK ++G Y+ M S + VE Q P
Sbjct: 2136 LCTRLAIMVKGAFRCMGTIQHLKSKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGNFPG 2195
Query: 115 ANKIYHLSGTQKFELPKEEIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVARE 172
+ + +F++ +A +F+ + + K + + + ++ TTL+ VF+ A++
Sbjct: 2196 SVQRERHYNMLQFQVSSS--SLARIFQLLLSHKDSLLIEEYSVTQTTLDQVFVNFAKQ 2251
Score = 106 bits (264), Expect = 3e-23
Identities = 68/217 (31%), Positives = 109/217 (49%), Gaps = 42/217 (19%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
M+R+LSVAI+ +GD KVV +DEP++G+DP SR+ +W+++ + R II++TH M+EAD
Sbjct: 1066 MQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADL 1125
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYG-GTYVFAM------------------------- 94
L DR+ I G L C G P LK +G G Y+ +
Sbjct: 1126 LGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVRKMKNIQSQRKGSEGTCSCSSKGFS 1185
Query: 95 TTSSDHEKDVE-------------NMVQRLTPNANKIYHLSGTQKFELPKEEIK---MAN 138
TT H D+ ++V P A + + F LP + K A+
Sbjct: 1186 TTCPAHVDDLTPEQVLDGDVNELMDVVLHHVPEAKLVECIGQELIFLLPNKNFKHRAYAS 1245
Query: 139 VFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVAREAQA 175
+FR +E + + ++G+SDT LE++F+KV ++ +
Sbjct: 1246 LFRELEETLADLGLSSFGISDTPLEEIFLKVTEDSDS 1282
>CED7_CAEEL (P34358) ABC transporter ced-7 (Cell death protein 7)
Length = 1704
Score = 100 bits (250), Expect = 1e-21
Identities = 56/180 (31%), Positives = 108/180 (59%), Gaps = 15/180 (8%)
Query: 2 KRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQ--DRAIILTTHSMEEAD 59
KR++SV ++L+ +++ +DEP+ G+DP +R+ +W ++ ++ + A++LT+HSM+E +
Sbjct: 1508 KRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNSALMLTSHSMDECE 1567
Query: 60 ALCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHEKD-VENMVQRLTPNA--- 115
ALC R+ + GSL +G +ELK YG Y ++ +++D V +VQ PN+
Sbjct: 1568 ALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRDMVVQLVQTRLPNSVLK 1627
Query: 116 ----NKIYHLSGTQKFELPKE-EIKMANVFRAIEAAKRNFTVFAWGLSDTTLEDVFIKVA 170
NK +L K+++PKE E + F ++A ++ V + L+ ++LE+ F+++A
Sbjct: 1628 TTSTNKTLNL----KWQIPKEKEDCWSAKFEMVQALAKDLGVKDFILAQSSLEETFLRLA 1683
Score = 86.7 bits (213), Expect = 3e-17
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 34/199 (17%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEADA 60
MKR+L V ++LIGD +VV +DEP+ G+DP +R+ + +++ K +R I+LTTH M+EA+
Sbjct: 683 MKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKANRTILLTTHYMDEAER 742
Query: 61 LCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHEKDVENMVQRLTPNANKIYH 120
L D + I G L G + LK ++G Y+ +T DH D M LT ++
Sbjct: 743 LGDWVFIMSHGKLVASGTNQYLKQKFGTGYL--LTVVLDHNGDKRKMAVILTDVCT--HY 798
Query: 121 LSGTQKFELPKEEIKM----------ANVFRAIEAAK-RNF--TVF-------------- 153
+ ++ E+ ++I++ +F+A+EA + RN+ VF
Sbjct: 799 VKEAERGEMHGQQIEIILPEARKKEFVPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATL 858
Query: 154 ---AWGLSDTTLEDVFIKV 169
++GLS TLE VFI +
Sbjct: 859 EMRSFGLSLNTLEQVFITI 877
>NODI_RHILO (P23703) Nod factor export ATP-binding protein I
(Nodulation ATP-binding protein I)
Length = 340
Score = 81.3 bits (199), Expect = 1e-15
Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIK-LAKQDRAIILTTHSMEEAD 59
MKR L++A +LI DP+++ MDEP+TGLDP +R +W ++ L + + IILTTH MEEA+
Sbjct: 177 MKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALLARGKTIILTTHFMEEAE 236
Query: 60 ALCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHE 101
LCDRL + G G P+ L + G V + HE
Sbjct: 237 RLCDRLCVLEKGRNIAEGGPQALIDEHIGCQVMEIYGGDPHE 278
>NODI_RHIS3 (P72335) Nod factor export ATP-binding protein I
(Nodulation ATP-binding protein I)
Length = 304
Score = 80.9 bits (198), Expect = 1e-15
Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIK-LAKQDRAIILTTHSMEEAD 59
MKRRL++A +LI DP+++ MDEP+TGLDP +R +W ++ L + + IILTTH MEEA+
Sbjct: 141 MKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLARGKTIILTTHFMEEAE 200
Query: 60 ALCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHE 101
LCDRL + G G P L + G V + + E
Sbjct: 201 RLCDRLCVLEHGRKLAEGSPHALIEEHIGCQVIEIFGGNPQE 242
>NODI_BRAJA (P26050) Nod factor export ATP-binding protein I
(Nodulation ATP-binding protein I)
Length = 306
Score = 80.5 bits (197), Expect = 2e-15
Identities = 49/128 (38%), Positives = 73/128 (56%), Gaps = 7/128 (5%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIK-LAKQDRAIILTTHSMEEAD 59
MKRRL++A +LI DP ++ MDEP+TGLDP +R +W ++ L + + I+LTTH MEEA+
Sbjct: 143 MKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARGKTILLTTHFMEEAE 202
Query: 60 ALCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHEKDVENMVQRLTPNANKIY 119
LCDRL + G G P L + G V + + D++ + + + P A I
Sbjct: 203 RLCDRLCVLESGCKIAEGKPDALIDEHIGCNVIEI-----YGGDLDQLRELIRPYARHI- 256
Query: 120 HLSGTQKF 127
+SG F
Sbjct: 257 EVSGETLF 264
>NDI2_RHIME (Q8GNH6) Nod factor export ATP-binding protein I
(Nodulation ATP-binding protein I)
Length = 335
Score = 79.7 bits (195), Expect = 3e-15
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIK-LAKQDRAIILTTHSMEEAD 59
MKRRL++A +LI DP+++ +DEP+TGLDP +R +W ++ L + + I+LTTH MEEA+
Sbjct: 172 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEEAE 231
Query: 60 ALCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHE 101
LCDRL + G G P L G V + + HE
Sbjct: 232 RLCDRLCVLEAGRKIAEGRPHVLIDEKIGCQVIEIYGGNPHE 273
>NDI1_RHIME (O52618) Nod factor export ATP-binding protein I
(Nodulation ATP-binding protein I)
Length = 355
Score = 79.3 bits (194), Expect = 4e-15
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIK-LAKQDRAIILTTHSMEEAD 59
MKRRL++A +LI DP+++ +DEP+TGLDP +R +W ++ L + + I+LTTH MEEA+
Sbjct: 192 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEEAE 251
Query: 60 ALCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHE 101
LCDRL + G G P L G V + HE
Sbjct: 252 RLCDRLCVLEAGHKIAEGRPHMLIDEKIGCQVIEIYGGDPHE 293
>NODI_RHILV (P08720) Nod factor export ATP-binding protein I
(Nodulation ATP-binding protein I)
Length = 311
Score = 78.6 bits (192), Expect = 7e-15
Identities = 48/128 (37%), Positives = 73/128 (56%), Gaps = 7/128 (5%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIK-LAKQDRAIILTTHSMEEAD 59
MKRRL++A +LI DP+++ +DEP+TGLDP +R +W ++ L + + I+LTTH MEEA+
Sbjct: 148 MKRRLTLAGALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHIMEEAE 207
Query: 60 ALCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHEKDVENMVQRLTPNANKIY 119
LCDRL + G G P L G V + + D + + + PNA ++
Sbjct: 208 RLCDRLCVLEAGRKIAEGRPHALIEEQIGCPVIEI-----YGGDPQELSLLIRPNARRL- 261
Query: 120 HLSGTQKF 127
+SG F
Sbjct: 262 EISGETLF 269
>NODI_BRASS (Q9Z3I3) Nod factor export ATP-binding protein I
(Nodulation ATP-binding protein I)
Length = 305
Score = 77.8 bits (190), Expect = 1e-14
Identities = 48/128 (37%), Positives = 72/128 (55%), Gaps = 7/128 (5%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIK-LAKQDRAIILTTHSMEEAD 59
MKRRL++A +LI DP ++ MDEP+TGLDP +R +W ++ L + + I+LTTH MEEA+
Sbjct: 142 MKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARGKTILLTTHFMEEAE 201
Query: 60 ALCDRLGIFVDGSLQCVGYPKELKGRYGGTYVFAMTTSSDHEKDVENMVQRLTPNANKIY 119
LCD L + G G P L + G V + + D++ + + + P A I
Sbjct: 202 RLCDPLCVLESGCKIAEGEPDALIDEHIGCNVIEI-----YGGDLDQLRELIRPYARHI- 255
Query: 120 HLSGTQKF 127
+SG F
Sbjct: 256 EVSGETLF 263
>NODI_RHISN (P55476) Nod factor export ATP-binding protein I
(Nodulation ATP-binding protein I)
Length = 343
Score = 77.0 bits (188), Expect = 2e-14
Identities = 39/83 (46%), Positives = 55/83 (65%), Gaps = 1/83 (1%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIK-LAKQDRAIILTTHSMEEAD 59
M+RRL++A +LI DP+++ +DEP+TGLDP +R +W ++ L + I+LTTH MEEAD
Sbjct: 180 MQRRLTLACALINDPQLLILDEPTTGLDPHARHLIWERLRSLLALGKTILLTTHFMEEAD 239
Query: 60 ALCDRLGIFVDGSLQCVGYPKEL 82
LCDRL + G G P L
Sbjct: 240 RLCDRLCVIEHGRKIVEGRPHAL 262
>NODI_RHIGA (P50332) Nod factor export ATP-binding protein I
(Nodulation ATP-binding protein I)
Length = 347
Score = 75.9 bits (185), Expect = 5e-14
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 1 MKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIK-LAKQDRAIILTTHSMEEAD 59
MKRRL++A +L+ DP+++ +DEP+TGLDP +R +W ++ L + + I+LTTH M+EA+
Sbjct: 184 MKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLIRGKTILLTTHMMDEAE 243
Query: 60 ALCDRLGIFVDGSLQCVGYPKEL 82
+CDRL + G + G P L
Sbjct: 244 RMCDRLCVLEGGRMIAEGPPLSL 266
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,252,391
Number of Sequences: 164201
Number of extensions: 790209
Number of successful extensions: 3132
Number of sequences better than 10.0: 701
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 2335
Number of HSP's gapped (non-prelim): 785
length of query: 180
length of database: 59,974,054
effective HSP length: 103
effective length of query: 77
effective length of database: 43,061,351
effective search space: 3315724027
effective search space used: 3315724027
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC146548.14