BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146343.12 + phase: 0 /pseudo
(176 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6 334 7e-92
RS6_ARATH (P51430) 40S ribosomal protein S6 328 5e-90
RS6_RAT (P62755) 40S ribosomal protein S6 224 1e-58
RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33) 224 1e-58
RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33) 224 1e-58
RS6_APLCA (Q9BMX5) 40S ribosomal protein S6 221 7e-58
RS6_ICTPU (Q90YR8) 40S ribosomal protein S6 221 9e-58
RS6_CHICK (P47838) 40S ribosomal protein S6 219 2e-57
RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6 218 7e-57
RS6_BRAFL (O01727) 40S ribosomal protein S6 217 1e-56
RS6_XENLA (P39017) 40S ribosomal protein S6 217 1e-56
RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B 214 1e-55
RS6A_SCHPO (P05752) 40S ribosomal protein S6-A 213 1e-55
RS6_SPOFR (Q95V32) 40S ribosomal protein S6 213 2e-55
RS6_MANSE (Q94624) 40S ribosomal protein S6 210 1e-54
RS6_DROME (P29327) 40S ribosomal protein S6 210 1e-54
RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment) 209 3e-54
RS6_AEDAE (Q9U761) 40S ribosomal protein S6 209 3e-54
RS6_AEDAL (Q9U762) 40S ribosomal protein S6 208 6e-54
RS6_CANGA (Q6FJH3) 40S ribosomal protein S6 206 2e-53
>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6
Length = 251
Score = 334 bits (856), Expect = 7e-92
Identities = 161/169 (95%), Positives = 166/169 (97%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLTPGRVRLLLHRGTPCFRG+GRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND
Sbjct: 63 MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDG 169
LPGLTDVEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT K G
Sbjct: 123 LPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKG 171
>RS6_ARATH (P51430) 40S ribosomal protein S6
Length = 249
Score = 328 bits (840), Expect = 5e-90
Identities = 158/174 (90%), Positives = 165/174 (94%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FNVANPTTGCQKKLEIDDDQKLRAF+DKR+SQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLTPGRVRLLLHRGTPCFRGHGRR GERRRKSVRGCIVSPDLSVLNLVIVKKG +D
Sbjct: 63 MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVSD 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTD EKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFT K G K+ +
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSK 176
>RS6_RAT (P62755) 40S ribosomal protein S6
Length = 249
Score = 224 bits (570), Expect = 1e-58
Identities = 117/175 (66%), Positives = 139/175 (78%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R K+G K PR K
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKEGKK-PRTK 172
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)
Length = 249
Score = 224 bits (570), Expect = 1e-58
Identities = 117/175 (66%), Positives = 139/175 (78%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R K+G K PR K
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKEGKK-PRTK 172
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)
Length = 249
Score = 224 bits (570), Expect = 1e-58
Identities = 117/175 (66%), Positives = 139/175 (78%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R K+G K PR K
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKEGKK-PRTK 172
>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6
Length = 247
Score = 221 bits (563), Expect = 7e-58
Identities = 112/170 (65%), Positives = 135/170 (78%), Gaps = 4/170 (2%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F+DKRIS E++ D LG+E+KGYV +I+GG DKQGFPM
Sbjct: 4 NISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT RVRLLL + C+R RR GER+RKSVRGCIV +LSVL+LVI+KKGE D+
Sbjct: 64 KQGVLTATRVRLLLDKNHSCYR--PRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGEQDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAK 171
PGLTD PR GPKRASKIRKLFNLSK+DDVR+YV RR +DG K
Sbjct: 122 PGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERDGKK 169
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6
Length = 249
Score = 221 bits (562), Expect = 9e-58
Identities = 115/175 (65%), Positives = 140/175 (79%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV D LG+E+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVI++KGE D+
Sbjct: 64 KQGVLTNGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIIRKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV RR TK+G K PR K
Sbjct: 122 PGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRRPL-TKEGKK-PRTK 172
>RS6_CHICK (P47838) 40S ribosomal protein S6
Length = 249
Score = 219 bits (559), Expect = 2e-57
Identities = 114/175 (65%), Positives = 138/175 (78%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++ +R F++KR++ EV D+LGEE+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R K+G K PR K
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKEGKK-PRTK 172
>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6
Length = 249
Score = 218 bits (554), Expect = 7e-57
Identities = 114/175 (65%), Positives = 139/175 (79%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV D LG+E+KGY+ +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCI +LSVLNLVI+KKGE D+
Sbjct: 64 KQGVLTHGRVRLLLAKGHSCYR--PRRTGERKRKSVRGCIGDANLSVLNLVIIKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRASKIRKLFNL+K+DDVR+YV RR TK+G K PR K
Sbjct: 122 PGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV--VRRPL-TKEGKK-PRTK 172
>RS6_BRAFL (O01727) 40S ribosomal protein S6
Length = 244
Score = 217 bits (553), Expect = 1e-56
Identities = 107/170 (62%), Positives = 136/170 (79%), Gaps = 4/170 (2%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR+S ++ ++LG+E+KGY+ +I+GG DKQGFPM
Sbjct: 4 NISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVI+KKGE D+
Sbjct: 64 KQGVLTNGRVRLLLGKGHSCYR--PRRTGERKRKSVRGCIVDSNLSVLNLVILKKGEQDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAK 171
PGLTD PR GPKRA +IRKLFNL+K+DDVR+YV RR K+G K
Sbjct: 122 PGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV--VRRPLPQKEGKK 169
>RS6_XENLA (P39017) 40S ribosomal protein S6
Length = 249
Score = 217 bits (552), Expect = 1e-56
Identities = 113/175 (64%), Positives = 138/175 (78%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E++D++KLR F++KR++ EV D LG+E+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIV+KGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVRKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R K+G K PR K
Sbjct: 122 PGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLAKEGKK-PRTK 172
>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B
Length = 239
Score = 214 bits (544), Expect = 1e-55
Identities = 111/175 (63%), Positives = 131/175 (74%), Gaps = 4/175 (2%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P G QK +EIDDD++LR F +KR+ QEV GD++G EF GYVFKITGG DKQGFPM
Sbjct: 4 NISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
QGVL P RVRLLL G PC+R RR+GER+RKSVRGCIV DL+VL L IVK+GE D+
Sbjct: 64 FQGVLLPHRVRLLLRAGHPCYR--PRRDGERKRKSVRGCIVGQDLAVLALAIVKQGEQDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTDV P+ GPKRASKIR+ FNLSK+DDVR++V RR K K P K
Sbjct: 122 PGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV--IRREVVPKKEGKKPYTK 174
>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A
Length = 239
Score = 213 bits (543), Expect = 1e-55
Identities = 110/175 (62%), Positives = 131/175 (74%), Gaps = 4/175 (2%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P G QK +EIDDD++LR F +KR+ QEV GD++G EF GYVFKITGG DKQGFPM
Sbjct: 4 NISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
QGVL P RVRLLL G PC+R RR+GER+RKSVRGCIV DL+VL L I+K+GE D+
Sbjct: 64 FQGVLLPHRVRLLLRAGHPCYR--PRRDGERKRKSVRGCIVGQDLAVLALAIIKQGEQDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTDV P+ GPKRASKIR+ FNLSK+DDVR++V RR K K P K
Sbjct: 122 PGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV--IRREVVPKKEGKKPYTK 174
>RS6_SPOFR (Q95V32) 40S ribosomal protein S6
Length = 253
Score = 213 bits (542), Expect = 2e-55
Identities = 111/177 (62%), Positives = 134/177 (74%), Gaps = 6/177 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
NV+ P TGCQK E+ D+ KLR F++KR+ EV D LG+E+KGYV +I GG DKQGFPM
Sbjct: 4 NVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT RVRLL+ +G C+R RR+GER+RKSVRGCIV +LSVL LVIV+KGE ++
Sbjct: 64 KQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVRGCIVDANLSVLALVIVRKGEQEI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAK--LPRYK 176
PGLTD PR GPKRASKIRKLFNLSK+DDVR+YV +R K+G + PRYK
Sbjct: 122 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKRLLPAKEGKENAKPRYK 176
>RS6_MANSE (Q94624) 40S ribosomal protein S6
Length = 253
Score = 210 bits (535), Expect = 1e-54
Identities = 109/177 (61%), Positives = 133/177 (74%), Gaps = 6/177 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
NV+ P TGCQK E+ D+ KLR F++KR+ EV D LG+E+KGYV ++ GG DKQGFPM
Sbjct: 4 NVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT RVRLL+ +G C+R RR+GER+RKSVRGCIV +LSVL LVIV+KGE ++
Sbjct: 64 KQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVRGCIVDANLSVLALVIVRKGEQEI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAK--LPRYK 176
PGLTD PR GPKRASKIRKLFNLSK+DDVR+YV + K+G + PRYK
Sbjct: 122 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKALLPAKEGKENAKPRYK 176
>RS6_DROME (P29327) 40S ribosomal protein S6
Length = 248
Score = 210 bits (535), Expect = 1e-54
Identities = 107/170 (62%), Positives = 128/170 (74%), Gaps = 4/170 (2%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
NV+ P TGCQK E+ D+ KLR F++KR+ Q V D LG+E+KGY +I GG DKQGFPM
Sbjct: 4 NVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV ++SVL LV++KKGE D+
Sbjct: 64 KQGVLTHGRVRLLLKKGHSCYR--PRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAK 171
PGLTD PR GPKRASKIRKL+NLSK+DDVR++V RR KD K
Sbjct: 122 PGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VRRPLPAKDNKK 169
>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)
Length = 199
Score = 209 bits (532), Expect = 3e-54
Identities = 103/131 (78%), Positives = 111/131 (84%), Gaps = 2/131 (1%)
Query: 44 KGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVS 103
KGYVFKI GGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRG+GRRNGERRRKSVRGCIVS
Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60
Query: 104 PDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRT 163
PDLSVLNLVIVKKGENDLPGLTD EKPRMRGP+ + L+ K+DDVRKYVNT
Sbjct: 61 PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNTTAEF 118
Query: 164 FTTKDGAKLPR 174
T G+K P+
Sbjct: 119 TTKWKGSKAPK 129
>RS6_AEDAE (Q9U761) 40S ribosomal protein S6
Length = 346
Score = 209 bits (532), Expect = 3e-54
Identities = 107/170 (62%), Positives = 127/170 (73%), Gaps = 4/170 (2%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
NV+ P TG QK E+ DD KLR F+DKR+ E+ D LG+E+KGYVFKI GG DKQGFPM
Sbjct: 4 NVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT RVRLLL +G C+R RR GER+RKSVRGCIV +LS L L++VKKGE D+
Sbjct: 64 KQGVLTNTRVRLLLKKGHSCYR--PRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAK 171
PGLTD PR GPKRAS IRKL+NL+K+DDVR++V +R KDG K
Sbjct: 122 PGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRPLPEKDGKK 169
>RS6_AEDAL (Q9U762) 40S ribosomal protein S6
Length = 349
Score = 208 bits (529), Expect = 6e-54
Identities = 110/175 (62%), Positives = 129/175 (72%), Gaps = 5/175 (2%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
NV+ P TG QK E+ DD KLR F+DKR+ E+ D LG+E+KGYVFKI GG DKQGFPM
Sbjct: 4 NVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT RVRLLL +G C+R RR GER+RKSVRGCIV +LS L L++VKKGE D+
Sbjct: 64 KQGVLTNTRVRLLLKKGHSCYR--PRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD R GPKRAS IRKL+NL+K+DDVR+YV +R KDG K PR K
Sbjct: 122 PGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VKRPLPEKDGKK-PRTK 173
>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6
Length = 236
Score = 206 bits (525), Expect = 2e-53
Identities = 103/173 (59%), Positives = 129/173 (74%), Gaps = 2/173 (1%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N+A P G QK +E+DD+ ++R F+DKRI QE+ G+A+G+EFKGY FKITGG DKQGFPM
Sbjct: 4 NIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVL P RV+LLL +G C+R RR+GER+RKSVRG IV PDL+VL+LVIVKKGE +L
Sbjct: 64 KQGVLLPTRVKLLLAKGHSCYR--PRRSGERKRKSVRGAIVGPDLAVLSLVIVKKGEQEL 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
G+TD P+ GPKRA+ IRK F L+K+DDVR +V T K K P+
Sbjct: 122 EGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFVIRREVTKGEKTYTKAPK 174
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.141 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,534,240
Number of Sequences: 164201
Number of extensions: 974632
Number of successful extensions: 2011
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1923
Number of HSP's gapped (non-prelim): 59
length of query: 176
length of database: 59,974,054
effective HSP length: 103
effective length of query: 73
effective length of database: 43,061,351
effective search space: 3143478623
effective search space used: 3143478623
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC146343.12