BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145767.1 - phase: 0
(191 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CING_XENLA (Q9PTD7) Cingulin 45 1e-04
NMCP_ARATH (Q9FLH0) Putative nuclear matrix constituent protein ... 41 0.002
V110_FOWPV (P36700) Protein FPV110 38 0.012
YLBO_BACSU (O34549) Hypothetical protein ylbO 38 0.016
CLPB_PSEPK (Q88Q71) Chaperone clpB 38 0.016
ANL3_MOUSE (Q9R182) Angiopoietin-related protein 3 precursor (An... 37 0.028
M5_STRP5 (P02977) M protein, serotype 5 precursor 36 0.047
CLPB_PSESM (Q889C2) Chaperone clpB 36 0.047
PAM_STRPY (P49054) Plasminogen-binding group A steptococcal M-li... 36 0.062
YIIU_ECOLI (P32164) Hypothetical protein yiiU 35 0.081
CING_MOUSE (P59242) Cingulin 35 0.11
YG80_AQUAE (O67591) Hypothetical protein AQ_1680 35 0.14
RADI_MOUSE (P26043) Radixin (ESP10) 35 0.14
RA50_METAC (Q8TRL1) DNA double-strand break repair rad50 ATPase 35 0.14
CLPB_HELPJ (Q9ZMH1) Chaperone clpB 35 0.14
CBF5_YEAST (P33322) Centromere/microtubule binding protein CBF5 ... 35 0.14
CAFA_MOUSE (Q9QWF0) Chromatin assembly factor 1 subunit A (CAF-1... 35 0.14
RADI_CHICK (Q9PU45) Radixin 34 0.18
RA50_AQUAE (O67124) Probable DNA double-strand break repair rad5... 34 0.18
LPB2_MOUSE (O35711) Liprin-beta 2 (Protein tyrosine phosphatase ... 34 0.18
>CING_XENLA (Q9PTD7) Cingulin
Length = 1360
Score = 45.1 bits (105), Expect = 1e-04
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 68 VRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEK 127
V+ D + LD+A R L +L E +EL+E ++ +++ LK KNEL E+K +L +K
Sbjct: 956 VKRDLESKLDEAQRSLKRLSLEYEELQECYQEEMKQKDHLKKTKNELEEQKRLLDKSMDK 1015
Query: 128 IEKQLKSM 135
+ ++L +M
Sbjct: 1016 LTRELDNM 1023
Score = 32.7 bits (73), Expect = 0.52
Identities = 16/60 (26%), Positives = 36/60 (59%)
Query: 76 LDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
+ +A + + EA+ + ++ ++ EE++ LK EL+ EK ++ DK+ I ++L+S+
Sbjct: 1049 IGEAQKQAKEKTAEAERHQFNSSRMQEEVQKLKLALQELQVEKETVELDKQMISQRLQSL 1108
Score = 30.4 bits (67), Expect = 2.6
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 68 VRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELR---EEKLVLKAD 124
V D+ ++ + ++ ++ +EL+ES++++ + + + K ELR +E L +K +
Sbjct: 623 VSQDQLSLESERQKINQVVRNLQRELEESSDEISQWKEMFQKNKEELRSTKQELLQMKLE 682
Query: 125 KEKIEKQLK 133
KE+ E +LK
Sbjct: 683 KEESEDELK 691
>NMCP_ARATH (Q9FLH0) Putative nuclear matrix constituent protein
1-like protein (NMCP1-like)
Length = 1042
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 71 DKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEK 130
DK +D A + L LK+E EL KL EE+ L+A+K E+ E LK +K K E
Sbjct: 501 DKRKRVDSATQKLEALKSETSELSTLEMKLKEELDDLRAQKLEMLAEADRLKVEKAKFEA 560
Query: 131 QLKSMPV 137
+ + + V
Sbjct: 561 EWEHIDV 567
Score = 31.2 bits (69), Expect = 1.5
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 81 RVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLK 122
R ++LK +ELK EKL + L+AE++E+R E LK
Sbjct: 725 REWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEELK 766
Score = 28.5 bits (62), Expect = 9.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 91 QELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQ 131
Q LKE EK LE ++ E L E+L +K D+E+ E++
Sbjct: 689 QSLKEMAEKELEHVQ---VELKRLDAERLEIKLDRERRERE 726
>V110_FOWPV (P36700) Protein FPV110
Length = 451
Score = 38.1 bits (87), Expect = 0.012
Identities = 30/131 (22%), Positives = 61/131 (45%), Gaps = 16/131 (12%)
Query: 43 KGCSFIVIVCCRFCDLSAVLEPGRPVRT--------DKPAILDDAIRVLSQL-KTEAQEL 93
K FI+I DL + L+ R + + + D I++ ++ + + +
Sbjct: 242 KNIEFIIINSVLLEDLKSRLDITRELNHTIDKMFNHNNNTLFSDIIKLSEEIIDKDFKNM 301
Query: 94 KESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSMPVSPAGFMPPPPMAAYQA 153
++ ++ +L ++K + KN+LRE L +++E+ L +PV G + Q
Sbjct: 302 EKMSDSVLADVKQISKTKNKLRERLLKAAISSKEVEEILSDIPVIEEGTIK-------QF 354
Query: 154 SVNKMAVYPNY 164
S+N+ AVY +Y
Sbjct: 355 SLNQRAVYDHY 365
>YLBO_BACSU (O34549) Hypothetical protein ylbO
Length = 193
Score = 37.7 bits (86), Expect = 0.016
Identities = 22/62 (35%), Positives = 33/62 (52%), Gaps = 2/62 (3%)
Query: 76 LDDAIRVLSQLKT--EAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLK 133
+ D I+ L Q K AQE + EKL E+I+ L+ E +LR E L+ E E+ K
Sbjct: 106 IQDVIQFLEQFKETPSAQEFQLEREKLKEQIQSLQKELEDLRSENQTLRNQLEMTEEDYK 165
Query: 134 SM 135
++
Sbjct: 166 AL 167
>CLPB_PSEPK (Q88Q71) Chaperone clpB
Length = 854
Score = 37.7 bits (86), Expect = 0.016
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 27/112 (24%)
Query: 72 KPAILDDAIRVLSQLKTEAQELKESN--------EKLLEEIKCLKAEKNELREEKLVLKA 123
KP +LD R L QLK E+Q LK+ EKL EEI+ L+ E ++L E KA
Sbjct: 408 KPEVLDRLDRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLEREYSDLEEIWASEKA 467
Query: 124 D-------KEKIEKQLKSMPVSPAGFMPPPPMAAYQASVNKMAVYPNYGYIP 168
+ ++KIE+ + + A + +N+MA YG IP
Sbjct: 468 EVQGSAQIQQKIEQSRQELEA-----------ARRKGDLNRMAEL-QYGVIP 507
>ANL3_MOUSE (Q9R182) Angiopoietin-related protein 3 precursor
(Angiopoietin-like 3)
Length = 455
Score = 37.0 bits (84), Expect = 0.028
Identities = 24/81 (29%), Positives = 43/81 (52%), Gaps = 7/81 (8%)
Query: 84 SQLKTEAQELKESNEKLL---EEIKCLKAEKNE----LREEKLVLKADKEKIEKQLKSMP 136
+++K E +EL+ + L EE+K + E N L EEK L+ +E+QL ++
Sbjct: 90 NEIKEEEKELRRTTSTLQVKNEEVKNMSVELNSKLESLLEEKTALQHKVRALEEQLTNLI 149
Query: 137 VSPAGFMPPPPMAAYQASVNK 157
+SPAG P + + ++ V +
Sbjct: 150 LSPAGAQEHPEVTSLKSFVEQ 170
>M5_STRP5 (P02977) M protein, serotype 5 precursor
Length = 492
Score = 36.2 bits (82), Expect = 0.047
Identities = 18/49 (36%), Positives = 32/49 (64%)
Query: 86 LKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKS 134
LKTE + LK NE L E K +AE ++L++++ L KE +E+++++
Sbjct: 83 LKTENEGLKTENEGLKTEKKEHEAENDKLKQQRDTLSTQKETLEREVQN 131
Score = 35.4 bits (80), Expect = 0.081
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 76 LDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
LD + QL+ E Q+L+E N+ K L+ + + RE K L+A+++K+E+Q K
Sbjct: 271 LDASREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQLEAEQQKLEEQNKIS 330
Query: 136 PVSPAG 141
S G
Sbjct: 331 EASRKG 336
Score = 33.1 bits (74), Expect = 0.40
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 86 LKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQ 131
LKT+ + LK NE L E + LK E L+ EK +A+ +K+++Q
Sbjct: 69 LKTKNEGLKTENEGLKTENEGLKTENEGLKTEKKEHEAENDKLKQQ 114
Score = 29.6 bits (65), Expect = 4.4
Identities = 18/53 (33%), Positives = 27/53 (49%)
Query: 79 AIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQ 131
A L + + E +LK NE L E + LK E L+ E LK +K++ E +
Sbjct: 55 AKEALDKYELENHDLKTKNEGLKTENEGLKTENEGLKTENEGLKTEKKEHEAE 107
>CLPB_PSESM (Q889C2) Chaperone clpB
Length = 854
Score = 36.2 bits (82), Expect = 0.047
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 72 KPAILDDAIRVLSQLKTEAQELKESN--------EKLLEEIKCLKAEKNELREEKLVLKA 123
KP +LD R L QLK EAQ LK+ EKL EEI L+ E +L E KA
Sbjct: 408 KPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEIVRLEKEYADLEEIWTSEKA 467
Query: 124 D-------KEKIEKQLKSMPVSPAGFMPPPPMAAYQASVNKMAVYPNYGYIP 168
+ ++KIE+ + + A + +N+MA YG IP
Sbjct: 468 EVTGSAQIQQKIEQSRQELEA-----------ARRRGDLNRMAEL-QYGIIP 507
>PAM_STRPY (P49054) Plasminogen-binding group A steptococcal M-like
protein PAM precursor (Fragment)
Length = 388
Score = 35.8 bits (81), Expect = 0.062
Identities = 19/65 (29%), Positives = 37/65 (56%)
Query: 71 DKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEK 130
DK L+ A+R +++ + EA+E + +KL EE + A + LR + + K+++EK
Sbjct: 133 DKQEHLNGALRYINEKEAEAKEKEAEQKKLKEEKQISDASRQGLRRDLDASREAKKQVEK 192
Query: 131 QLKSM 135
L ++
Sbjct: 193 DLANL 197
>YIIU_ECOLI (P32164) Hypothetical protein yiiU
Length = 81
Score = 35.4 bits (80), Expect = 0.081
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 74 AILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLK 133
A + AI ++ L+ E +ELKE N L +E++ + ++ EL E LK + +++L+
Sbjct: 13 AKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQ 72
Query: 134 SM 135
++
Sbjct: 73 AL 74
>CING_MOUSE (P59242) Cingulin
Length = 1191
Score = 35.0 bits (79), Expect = 0.11
Identities = 19/60 (31%), Positives = 36/60 (59%)
Query: 76 LDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
LD+A R L++L E Q L + E+ ++ + L+ K EL E+K +L +++ K+L+ +
Sbjct: 790 LDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEEQKRLLNRTVDRLNKELEQI 849
Score = 30.4 bits (67), Expect = 2.6
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 54 RFCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNE 113
R L E + + DK L +S+L+ E E K + E L + + + + ++
Sbjct: 930 RLQGLEQEAENKKRFQDDKARQLKSLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQ 989
Query: 114 LREEKLV-------LKADKEKIEKQ---LKSMPVSPAGFMPPPPMAAYQASVNKM 158
LR E + L+ DK +E+Q LK+ S GF P + S N++
Sbjct: 990 LRTELMQERSARQDLECDKISLERQNKDLKTRLASSEGFQKPSASLSQLESQNQL 1044
>YG80_AQUAE (O67591) Hypothetical protein AQ_1680
Length = 265
Score = 34.7 bits (78), Expect = 0.14
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 76 LDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKA-EKNELREEKLVLKADKEKIEKQLKS 134
L D+I + K + ++E +KL EE K L+A +K L EE +K+K+EK +KS
Sbjct: 148 LKDSINLKEDYKVLLKLIEEKLKKLEEERKKLEALQKTPLTEE------EKKKLEKLIKS 201
Query: 135 MPVSPAGFMPP 145
+ +PA + P
Sbjct: 202 VEKAPADEIAP 212
Score = 28.9 bits (63), Expect = 7.6
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 76 LDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
+++ + L +L + +ELKE +L EIK + E+ EE + +EKI+K++ ++
Sbjct: 64 IEETVDYLEELNVKKEELKEKYLELKGEIKSI-----EILEE----RKKREKIKKEI-AV 113
Query: 136 PVSPAGFM 143
+ GFM
Sbjct: 114 SLQELGFM 121
>RADI_MOUSE (P26043) Radixin (ESP10)
Length = 583
Score = 34.7 bits (78), Expect = 0.14
Identities = 28/85 (32%), Positives = 41/85 (47%), Gaps = 7/85 (8%)
Query: 66 RPVRTDKPAILDDAIRVLSQLKTEAQELKESNEK--LLEEIKCLKAEK-NELREEKLVLK 122
R K AI A + + A+EL E K LLEE K K E+ E + + +
Sbjct: 394 RAAEEAKSAIAKQAADQMKNQEQLAEELAEFTAKIALLEEAKKKKEEEATEWQHKAFAAQ 453
Query: 123 ADKEKIEKQLKSMPVSPAGFMPPPP 147
D EK +++LK++ +P PPPP
Sbjct: 454 EDLEKTKEELKTVMSAP----PPPP 474
>RA50_METAC (Q8TRL1) DNA double-strand break repair rad50 ATPase
Length = 1074
Score = 34.7 bits (78), Expect = 0.14
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 65 GRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKAD 124
G+ + T + I +DA++ L L QEL+ S +LL +IK L+ ++ E R K ++ +
Sbjct: 634 GKLIETHRARIEEDALK-LESLDKRKQELETSGRQLLSDIKTLQVQEAEAR--KAHIEGE 690
Query: 125 KEKIE 129
K IE
Sbjct: 691 KTLIE 695
Score = 32.3 bits (72), Expect = 0.69
Identities = 16/54 (29%), Positives = 31/54 (56%), Gaps = 1/54 (1%)
Query: 84 SQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSMPV 137
S++ A+E ++ EKL E+ +K + EL E+K+ D +K+EK++ +
Sbjct: 569 SEIACTAEECEDKKEKLASELADIKVQHAEL-EKKITRLKDAKKLEKRISDYDI 621
>CLPB_HELPJ (Q9ZMH1) Chaperone clpB
Length = 856
Score = 34.7 bits (78), Expect = 0.14
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 72 KPAILDDAIRVLSQLKTEAQEL----KESNEKLLEEIKCLKAEKNELREEKLVLKADKEK 127
+PA L R + +L+ E Q L KESN K ++EI LK E ++L+EEK+ L+A E
Sbjct: 405 EPAKLSSVKRSIQRLEMEKQALEMENKESNHKRMQEI--LK-ELSDLKEEKIQLEAQFEN 461
Query: 128 IEKQLKSM 135
++ K +
Sbjct: 462 EKEVFKEI 469
>CBF5_YEAST (P33322) Centromere/microtubule binding protein CBF5
(Centromere-binding factor 5) (Small nucleolar RNP
protein CBF5) (H/ACA snoRNP protein CBF5) (p64')
Length = 483
Score = 34.7 bits (78), Expect = 0.14
Identities = 21/53 (39%), Positives = 34/53 (63%), Gaps = 1/53 (1%)
Query: 82 VLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKS 134
++ +++TE +E+KE + K ++ K K EK E ++EK K KEK EK+ KS
Sbjct: 417 LIKEVETEKEEVKEDDSKKEKKEKKDKKEKKE-KKEKKDKKEKKEKKEKKRKS 468
>CAFA_MOUSE (Q9QWF0) Chromatin assembly factor 1 subunit A (CAF-1
subunit A) (Chromatin assembly factor I p150 subunit)
(CAF-I 150 kDa subunit) (CAF-Ip150)
Length = 911
Score = 34.7 bits (78), Expect = 0.14
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 84 SQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLK 133
S+L + ++ +E EKL EEI+ K E + +EE+ LK +KE+ EK+ K
Sbjct: 316 SKLHRDREQQREEKEKLREEIRRAKEEARKKKEEEKELK-EKERREKREK 364
Score = 32.3 bits (72), Expect = 0.69
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 87 KTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEK--QLKSMPVSP 139
+ EA E K ++ EE K L+ E+ LREE+ +KA+K +I + Q P +P
Sbjct: 383 RQEALEAKLEEKRKKEEEKRLREEEKRLREEEKRIKAEKAEITRFFQKPKTPQAP 437
Score = 30.0 bits (66), Expect = 3.4
Identities = 16/49 (32%), Positives = 29/49 (58%)
Query: 85 QLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLK 133
Q + E ++L+E + EE + K E+ EL+E++ K +K++ EK K
Sbjct: 324 QQREEKEKLREEIRRAKEEARKKKEEEKELKEKERREKREKDEKEKAEK 372
Score = 29.3 bits (64), Expect = 5.8
Identities = 18/63 (28%), Positives = 31/63 (48%), Gaps = 3/63 (4%)
Query: 87 KTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKI---EKQLKSMPVSPAGFM 143
K E Q LKE K +E K E+ +EE+ L+ +++++ EK++K+ F
Sbjct: 369 KAEKQRLKEEKRKERQEALEAKLEEKRKKEEEKRLREEEKRLREEEKRIKAEKAEITRFF 428
Query: 144 PPP 146
P
Sbjct: 429 QKP 431
Score = 28.5 bits (62), Expect = 9.9
Identities = 15/47 (31%), Positives = 29/47 (60%)
Query: 89 EAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
E +E +E +EK E + LK EK + R+E L K ++++ +++ K +
Sbjct: 357 ERREKREKDEKEKAEKQRLKEEKRKERQEALEAKLEEKRKKEEEKRL 403
>RADI_CHICK (Q9PU45) Radixin
Length = 583
Score = 34.3 bits (77), Expect = 0.18
Identities = 28/85 (32%), Positives = 41/85 (47%), Gaps = 7/85 (8%)
Query: 66 RPVRTDKPAILDDAIRVLSQLKTEAQELKESNEK--LLEEIKCLKAEK-NELREEKLVLK 122
R K A+ A + + A EL E K LLEE K K E+ +E + + +
Sbjct: 394 RAAEEAKAALAKQAADQMKNQEQLAAELAEFTAKIALLEEAKKKKEEEASEWQHKAFAAQ 453
Query: 123 ADKEKIEKQLKSMPVSPAGFMPPPP 147
D EK +++LKS+ +P PPPP
Sbjct: 454 EDLEKTKEELKSVMSAP----PPPP 474
>RA50_AQUAE (O67124) Probable DNA double-strand break repair rad50
ATPase
Length = 978
Score = 34.3 bits (77), Expect = 0.18
Identities = 21/59 (35%), Positives = 35/59 (58%), Gaps = 6/59 (10%)
Query: 81 RVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADK----EKIEKQLKSM 135
+ L L+ E +ELKE+ EKL +E+K KAE+ + E +L K E +EK+++ +
Sbjct: 207 KTLKNLEEELKELKETEEKLRQELK--KAEEKDSLERELSQVVTKLKELENLEKEVEKL 263
Score = 30.8 bits (68), Expect = 2.0
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 83 LSQLKTEAQELKESNEKLLEEIKCLKAEK-NELREEKLVLKADKEKIEKQL 132
+S+LK A+ELKE E+ ++ L A+K N L+EE L+ + E++ K++
Sbjct: 506 ISELK-HAKELKEKEEREIDTTLKLYAQKINSLKEEMEKLRNEVEELRKEI 555
Score = 30.0 bits (66), Expect = 3.4
Identities = 15/49 (30%), Positives = 29/49 (58%)
Query: 83 LSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQ 131
+ ++ + ELK KL +E+ LK E + +EE ++A+KEK +++
Sbjct: 283 IEEIDKKLTELKVRKNKLTKELAVLKDELSFAQEELNRIEAEKEKFKEE 331
Score = 29.3 bits (64), Expect = 5.8
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 62 LEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKL-- 119
L+ + ++ + +D +++ +Q + LKE EKL E++ L+ E E +E++
Sbjct: 509 LKHAKELKEKEEREIDTTLKLYAQ---KINSLKEEMEKLRNEVEELRKEIPENLKERIKK 565
Query: 120 --VLKADKEKIEKQL 132
L+ +KEK+E +L
Sbjct: 566 LEELRIEKEKLEHKL 580
Score = 28.5 bits (62), Expect = 9.9
Identities = 16/58 (27%), Positives = 32/58 (54%), Gaps = 1/58 (1%)
Query: 76 LDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLK 133
+++ + L++LK +L + L +E+ + E N + EK K +KE+ EK+L+
Sbjct: 283 IEEIDKKLTELKVRKNKLTKELAVLKDELSFAQEELNRIEAEKEKFKEEKER-EKELE 339
>LPB2_MOUSE (O35711) Liprin-beta 2 (Protein tyrosine phosphatase
receptor type f polypeptide-interacting protein binding
protein 2) (PTPRF-interacting protein binding protein 2)
(Coiled-coil like protein 1)
Length = 882
Score = 34.3 bits (77), Expect = 0.18
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 62 LEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVL 121
+E + + +K ++ ++ L LK + +EL+ + E+K KAE +L+E+ +
Sbjct: 191 MEKEQKEQEEKQRKAEELLQELKHLKIKVEELENERNQYEWELKATKAEVAQLQEQVALK 250
Query: 122 KADKEKIEKQL 132
A+ E++ QL
Sbjct: 251 DAEIERLHSQL 261
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,585,294
Number of Sequences: 164201
Number of extensions: 900678
Number of successful extensions: 7614
Number of sequences better than 10.0: 369
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 203
Number of HSP's that attempted gapping in prelim test: 6637
Number of HSP's gapped (non-prelim): 1157
length of query: 191
length of database: 59,974,054
effective HSP length: 104
effective length of query: 87
effective length of database: 42,897,150
effective search space: 3732052050
effective search space used: 3732052050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Medicago: description of AC145767.1