BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145513.11 - phase: 0 /pseudo
(820 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.7... 39 0.073
FRS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor 38 0.12
VS41_GIALA (P92127) Variant-specific surface protein VSP4A1 prec... 36 0.47
YP23_CAEEL (Q09202) Hypothetical protein AH6.3 in chromosome II 35 0.80
CTC7_HUMAN (Q9BQN2) Putative metallothionein C20orf127 34 1.4
Y858_TREPA (O83830) Hypothetical UPF0164 protein TP0858 precursor 34 1.8
SLU7_YEAST (Q02775) Pre-mRNA splicing factor SLU7 34 1.8
MT_XENLA (Q05890) Metallothionein (MT) 34 1.8
MTA_CYPS1 (Q92044) Metallothionein A (MT A) 34 1.8
KRUA_HUMAN (P26371) Keratin, ultra high-sulfur matrix protein A ... 34 1.8
MT_GADMO (P51902) Metallothionein (MT) 33 2.3
MT_CARAU (P52723) Metallothionein (MT) 33 3.1
MTA_CARCW (Q8AWG2) Metallothionein A (MT-A) 33 3.1
MT2_CYPCA (Q9I9I0) Metallothionein II (MT-II) 33 3.1
MT2_BRARE (Q7ZSY6) Metallothionein 2 (MT 2) 33 3.1
MT1_BRARE (P52722) Metallothionein 1 (MT 1) 33 3.1
MT_RUTRU (P80593) Metallothionein (MT) 33 4.0
KR45_HUMAN (Q9BYR2) Keratin associated protein 4-5 (Keratin asso... 33 4.0
TR1B_RAT (Q80WY6) Tumor necrosis factor receptor superfamily mem... 32 5.2
MT_ORYLA (Q6S4N8) Metallothionein (MT) 32 5.2
>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75)
(Furin 2)
Length = 1679
Score = 38.5 bits (88), Expect = 0.073
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 756 TSCKHHFTTT*HHCTTTCCNQHCATCKQQCANCKQHCATCK----QLCANCEAT 805
TSC HH H C + C T +CA C CATC Q C C ++
Sbjct: 1081 TSCDHHLVMHEHKCYSACPLDTYETEDNKCAFCHSTCATCNGPTDQDCITCRSS 1134
>FRS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor
Length = 4010
Score = 37.7 bits (86), Expect = 0.12
Identities = 33/134 (24%), Positives = 47/134 (34%), Gaps = 16/134 (11%)
Query: 685 CNCHMYLT----CIMHIPNQSNCSATSSTTCT--QEERAS*QERTKQKGWEIIWNHTHNC 738
C H YL C + P+ C S CT + A + E +N C
Sbjct: 698 CGTHFYLESTGLCEVCHPSCLTCEGKSPHNCTGCESTHALLAGCCVSQCPETHFNLEGTC 757
Query: 739 TNSFNHNRSI--TWKHNCTTSCKHHFTTT*HHCTTTCCNQ-------HCATCKQQCANCK 789
T R + +C SC H T T HC T+C + +CA C C +C
Sbjct: 758 TECHPSCRQCHGPLESDCV-SCHPHLTLTSGHCKTSCKEEQFLNLVGYCADCHPLCQHCV 816
Query: 790 QHCATCKQLCANCE 803
+ +C C+
Sbjct: 817 ANLQDTGSICLKCQ 830
>VS41_GIALA (P92127) Variant-specific surface protein VSP4A1
precursor (CRISP-90)
Length = 687
Score = 35.8 bits (81), Expect = 0.47
Identities = 21/64 (32%), Positives = 29/64 (44%), Gaps = 13/64 (20%)
Query: 756 TSCKHHFTTT*HHCTTTCCNQHCATCKQQCANCKQHCATCKQ----------LCANCEAT 805
T+C + CTTTC + +CATC + A + C CK C +C T
Sbjct: 340 TACLDGYFLERGSCTTTCAD-NCATCSE--ATTEDKCKICKAGFFLASPGEGKCISCSDT 396
Query: 806 NSGG 809
N+GG
Sbjct: 397 NNGG 400
>YP23_CAEEL (Q09202) Hypothetical protein AH6.3 in chromosome II
Length = 230
Score = 35.0 bits (79), Expect = 0.80
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 575 ILPSNGPKLWPQVDLP--PILPPYVRRAPSRPKKQRKKGNDEKVKHSQSGAGSSSNSKSV 632
+ P N PK PQ +P P P +AP PK + K DE K + + S+ SK
Sbjct: 37 VSPLNEPKPPPQSAVPQKPAAPAAEEKAPVDPKDPKSKDVDEAKKPDPANSKKSNKSKKP 96
Query: 633 PKRNQHSLK 641
K ++ S K
Sbjct: 97 EKGSKKSKK 105
>CTC7_HUMAN (Q9BQN2) Putative metallothionein C20orf127
Length = 58
Score = 34.3 bits (77), Expect = 1.4
Identities = 19/53 (35%), Positives = 24/53 (44%), Gaps = 4/53 (7%)
Query: 753 NCTT--SCKHHFTTT*HHCTTTCCNQHCATC-KQQCANCKQHCATCKQLCANC 802
+CTT SC + C T C + C +C CA C Q C CK C+ C
Sbjct: 6 SCTTGGSCTCAGSCKCKECKCTSCKKSCCSCCPMGCAKCAQGC-VCKGACSCC 57
>Y858_TREPA (O83830) Hypothetical UPF0164 protein TP0858 precursor
Length = 396
Score = 33.9 bits (76), Expect = 1.8
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 768 HCTTTCCNQHCATCKQQCANCKQHCATCKQLCANCEATNSGGKHT 812
+CT+TC + C CK++C C A CK NC + K T
Sbjct: 228 NCTSTC--EKCGCCKERCC-CNGKKACCKDCDCNCPCQDCNDKGT 269
>SLU7_YEAST (Q02775) Pre-mRNA splicing factor SLU7
Length = 382
Score = 33.9 bits (76), Expect = 1.8
Identities = 33/118 (27%), Positives = 44/118 (36%), Gaps = 40/118 (33%)
Query: 593 LPPYVRRAP----SRPKKQ--RKKGNDEK------------VKHSQSGAGSSSN--SKSV 632
+P Y+R P PK+Q +K GND+ V H Q G + + + S
Sbjct: 33 IPRYIRNQPWYYKDTPKEQEGKKPGNDDTSTAEGGEKSDYLVHHRQKAKGGALDIDNNSE 92
Query: 633 PK-------------------RNQHSLK-CGRCGELGHNVRTCYGKQLGDRMLAPGEN 670
PK R+ HSL C CGE GH + C K + L P N
Sbjct: 93 PKIGMGIKDEFKLIRPQKMSVRDSHSLSFCRNCGEAGHKEKDCMEKPRKMQKLVPDLN 150
>MT_XENLA (Q05890) Metallothionein (MT)
Length = 62
Score = 33.9 bits (76), Expect = 1.8
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 770 TTTCCNQHCATCKQQCAN-CKQHCATCKQLCANCE 803
T +C N C +CK+ C + C C+ C Q C +CE
Sbjct: 19 TCSCSNCKCTSCKKSCCSCCPAECSKCSQGC-HCE 52
Score = 32.3 bits (72), Expect = 5.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 757 SCKHHFTTT*HHCTTTCCNQHCAT-CKQQCANCKQ--HCATCKQLCANC 802
SC T + +C T C + C + C +C+ C Q HC + C+ C
Sbjct: 13 SCSCGTTCSCSNCKCTSCKKSCCSCCPAECSKCSQGCHCEKGSKKCSCC 61
>MTA_CYPS1 (Q92044) Metallothionein A (MT A)
Length = 60
Score = 33.9 bits (76), Expect = 1.8
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 14/54 (25%)
Query: 747 SITWKHNCTTSCKHHFTTT*HHCTTTCCNQHCATCKQQCAN-CKQHCATCKQLC 799
S T K NC TSC TC N C CK+ C + C C+ C C
Sbjct: 7 SKTGKCNCGTSC-------------TCTNCSCKCCKKSCCSCCPSGCSKCASGC 47
>KRUA_HUMAN (P26371) Keratin, ultra high-sulfur matrix protein A
(UHS keratin A) (UHS KerA)
Length = 169
Score = 33.9 bits (76), Expect = 1.8
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 769 CTTTCCNQHCATCKQQCANCKQHCATCKQLCANCEATNSG 808
C CC+ C + QC+ CK +C+ C C ++ G
Sbjct: 83 CKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRG 122
>MT_GADMO (P51902) Metallothionein (MT)
Length = 60
Score = 33.5 bits (75), Expect = 2.3
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 14/49 (28%)
Query: 753 NCTTSCKHHFTTT*HHCTTTCCNQHCATCKQQCAN-CKQHCATCKQLCA 800
NC TSC TC N C CK+ C C C+ C CA
Sbjct: 13 NCGTSC-------------TCANCSCTKCKKSCCECCPSGCSKCASGCA 48
>MT_CARAU (P52723) Metallothionein (MT)
Length = 60
Score = 33.1 bits (74), Expect = 3.1
Identities = 17/57 (29%), Positives = 23/57 (39%), Gaps = 15/57 (26%)
Query: 753 NCTTSCKHHFTTT*HHCTTTCCNQHCATCKQQCAN-CKQHCATCKQLCANCEATNSG 808
NC +CK C N C TCK+ C + C C+ C C C+ + G
Sbjct: 13 NCGATCK-------------CTNCQCTTCKKSCCSCCPSGCSKCASGCV-CKGNSCG 55
Score = 31.6 bits (70), Expect = 8.9
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 7/33 (21%)
Query: 771 TTCCNQHC-ATCKQQCANCKQHCATCKQLCANC 802
T CN C ATCK C NC+ C TCK+ C +C
Sbjct: 9 TGACN--CGATCK--CTNCQ--CTTCKKSCCSC 35
>MTA_CARCW (Q8AWG2) Metallothionein A (MT-A)
Length = 60
Score = 33.1 bits (74), Expect = 3.1
Identities = 17/57 (29%), Positives = 23/57 (39%), Gaps = 15/57 (26%)
Query: 753 NCTTSCKHHFTTT*HHCTTTCCNQHCATCKQQCAN-CKQHCATCKQLCANCEATNSG 808
NC +CK C N C TCK+ C + C C+ C C C+ + G
Sbjct: 13 NCGATCK-------------CTNCQCTTCKKSCCSCCPSGCSKCASGCV-CKGNSCG 55
>MT2_CYPCA (Q9I9I0) Metallothionein II (MT-II)
Length = 60
Score = 33.1 bits (74), Expect = 3.1
Identities = 17/57 (29%), Positives = 23/57 (39%), Gaps = 15/57 (26%)
Query: 753 NCTTSCKHHFTTT*HHCTTTCCNQHCATCKQQCAN-CKQHCATCKQLCANCEATNSG 808
NC +CK C N C TCK+ C + C C+ C C C+ + G
Sbjct: 13 NCGATCK-------------CTNCQCTTCKKSCCSCCPSGCSKCASGCV-CKGNSCG 55
>MT2_BRARE (Q7ZSY6) Metallothionein 2 (MT 2)
Length = 60
Score = 33.1 bits (74), Expect = 3.1
Identities = 17/57 (29%), Positives = 23/57 (39%), Gaps = 15/57 (26%)
Query: 753 NCTTSCKHHFTTT*HHCTTTCCNQHCATCKQQCAN-CKQHCATCKQLCANCEATNSG 808
NC +CK C N C TCK+ C + C C+ C C C+ + G
Sbjct: 13 NCGATCK-------------CTNCQCTTCKKSCCSCCPSGCSKCASGCV-CKGNSCG 55
>MT1_BRARE (P52722) Metallothionein 1 (MT 1)
Length = 60
Score = 33.1 bits (74), Expect = 3.1
Identities = 17/57 (29%), Positives = 23/57 (39%), Gaps = 15/57 (26%)
Query: 753 NCTTSCKHHFTTT*HHCTTTCCNQHCATCKQQCAN-CKQHCATCKQLCANCEATNSG 808
NC +CK C N C TCK+ C + C C+ C C C+ + G
Sbjct: 13 NCGATCK-------------CTNCQCTTCKKSCCSCCPSGCSKCASGCV-CKGNSCG 55
Score = 31.6 bits (70), Expect = 8.9
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 7/33 (21%)
Query: 771 TTCCNQHC-ATCKQQCANCKQHCATCKQLCANC 802
T CN C ATCK C NC+ C TCK+ C +C
Sbjct: 9 TGACN--CGATCK--CTNCQ--CTTCKKSCCSC 35
>MT_RUTRU (P80593) Metallothionein (MT)
Length = 60
Score = 32.7 bits (73), Expect = 4.0
Identities = 17/57 (29%), Positives = 22/57 (37%), Gaps = 15/57 (26%)
Query: 753 NCTTSCKHHFTTT*HHCTTTCCNQHCATCKQQCAN-CKQHCATCKQLCANCEATNSG 808
NC +CK C N C TCK+ C C C+ C C C+ + G
Sbjct: 13 NCGATCK-------------CTNCQCTTCKKSCCTCCPSGCSKCASGCV-CKGNSCG 55
>KR45_HUMAN (Q9BYR2) Keratin associated protein 4-5 (Keratin
associated protein 4.5) (Ultrahigh sulfur keratin
associated protein 4.5)
Length = 186
Score = 32.7 bits (73), Expect = 4.0
Identities = 20/59 (33%), Positives = 26/59 (43%), Gaps = 7/59 (11%)
Query: 737 NCTNSFNHNRSITWKHNCTTSCKHHFTTT*HHCTTTCCNQHCATCKQQCANCKQHCATC 795
+C S + +S ++ C SC TT C TTCC C CK QC + TC
Sbjct: 4 SCCGSVSSEQSCGLENCCCPSCCQ--TTC---CRTTCCRPSC--CKPQCCQSVCYQPTC 55
>TR1B_RAT (Q80WY6) Tumor necrosis factor receptor superfamily member
1B precursor (Tumor necrosis factor receptor 2) (TNF-R2)
(Tumor necrosis factor receptor type II) (p75) (p80
TNF-alpha receptor)
Length = 474
Score = 32.3 bits (72), Expect = 5.2
Identities = 24/95 (25%), Positives = 33/95 (34%), Gaps = 24/95 (25%)
Query: 703 CSATSSTTCTQEERAS*QERTKQKGWEIIWNHTHNCTNSFNHNRSITWKHNCTTSCKHHF 762
C+ TS T C + +WNH H C +C++SC
Sbjct: 68 CNKTSDTVCADCAAGMFTQ---------VWNHLHTCL-------------SCSSSCSDDQ 105
Query: 763 TTT*HHCTTTCCNQHCATCKQQCANCKQHCATCKQ 797
T H+CT N+ CA K H C+Q
Sbjct: 106 VET-HNCTKK-QNRVCACNADSYCALKLHSGNCRQ 138
>MT_ORYLA (Q6S4N8) Metallothionein (MT)
Length = 60
Score = 32.3 bits (72), Expect = 5.2
Identities = 19/56 (33%), Positives = 21/56 (36%), Gaps = 19/56 (33%)
Query: 747 SITWKHNCTTSCKHHFTTT*HHCTTTCCNQHCATCKQQCANCKQHCATCKQLCANC 802
S T K NC SC TC N C +CK+ C CA C C C
Sbjct: 7 SKTGKCNCGGSC-------------TCTNCSCTSCKKSC------CACCPSGCTKC 43
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.344 0.151 0.515
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,277,748
Number of Sequences: 164201
Number of extensions: 3444215
Number of successful extensions: 18521
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 18383
Number of HSP's gapped (non-prelim): 127
length of query: 820
length of database: 59,974,054
effective HSP length: 119
effective length of query: 701
effective length of database: 40,434,135
effective search space: 28344328635
effective search space used: 28344328635
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 70 (31.6 bits)
Medicago: description of AC145513.11