BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145330.14 - phase: 0
(1199 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 384 e-106
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 372 e-102
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 176 3e-43
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 172 4e-42
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 152 5e-36
YMU0_YEAST (Q04670) Transposon Ty1 protein B 132 6e-30
YMD9_YEAST (Q03434) Transposon Ty1 protein B 129 6e-29
YME4_YEAST (Q04711) Transposon Ty1 protein B 128 1e-28
YMT5_YEAST (Q04214) Transposon Ty1 protein B 126 3e-28
YJZ9_YEAST (P47100) Transposon Ty1 protein B 126 3e-28
YJZ7_YEAST (P47098) Transposon Ty1 protein B 126 4e-28
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 119 6e-26
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 107 2e-22
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 77 2e-13
WAIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein interacting... 54 3e-06
DRI_DROME (Q24573) Dead ringer protein (Retained protein) 54 3e-06
HXB3_MOUSE (P09026) Homeobox protein Hox-B3 (Hox-2.7) (MH-23) 52 7e-06
RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX) (E... 52 1e-05
GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2 51 2e-05
PO41_MOUSE (P17208) POU domain, class 4, transcription factor 1 ... 50 3e-05
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 384 bits (987), Expect = e-106
Identities = 220/522 (42%), Positives = 327/522 (62%), Gaps = 26/522 (4%)
Query: 690 PKNVQEALKIPKWKE---AVLEEMRALEKNKTWKIMTLPAGKNTVGCKWVFTVKYNSDNT 746
P++++E L P+ + A+ EEM +L+KN T+K++ LP GK + CKWVF +K + D
Sbjct: 811 PESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCK 870
Query: 747 VERYKARLVAKGFTQAYGIDYSETFAPVAKLNTVRVLLSLAVNLDWPLNQLDVKNAFLNG 806
+ RYKARLV KGF Q GID+ E F+PV K+ ++R +LSLA +LD + QLDVK AFL+G
Sbjct: 871 LVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHG 930
Query: 807 DLQEEVYMDSPPGFEDKFGLN-VCKLQKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDH 865
DL+EE+YM+ P GFE + VCKL KSLYGLKQ+PR W+ KF +K Q Y++ SD
Sbjct: 931 DLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDP 990
Query: 866 TLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVA 925
++ + ++ IL++YVDD+++ G D + +LK +L+K F++KDLG + LGM++
Sbjct: 991 CVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIV 1050
Query: 926 RSR--KGIVVSQRKYILDLLEETGMSGCRPADTPMELNAKL---------WEKGN---VP 971
R R + + +SQ KYI +LE M +P TP+ + KL EKGN VP
Sbjct: 1051 RERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVP 1110
Query: 972 VDIGRYQRLVGKLIY-LAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKG 1030
Y VG L+Y + TRPDIA +V VVS+F+ +P +EH EAV ILRYL+ G
Sbjct: 1111 -----YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDC 1165
Query: 1031 LYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEAEF 1090
L F +D + +TDAD AG + +RKS+TGY G ++W+SK Q VA S+ EAE+
Sbjct: 1166 LCF-GGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEY 1224
Query: 1091 RAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHDRTKHIEIDRHFI 1150
A + E++W+++ L+EL L ++CDS++AI ++ N + H RTKHI++ H+I
Sbjct: 1225 IAATETGKEMIWLKRFLQELGLH-QKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWI 1283
Query: 1151 KEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGM 1192
+E + ++ + +++NE AD+LTK + R FE +GM
Sbjct: 1284 REMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325
Score = 51.6 bits (122), Expect = 1e-05
Identities = 75/379 (19%), Positives = 150/379 (38%), Gaps = 63/379 (16%)
Query: 94 LKFEVQRLDGKN-YMEWSQTVRLILDGKGKLGFITGEIQMPSTTDPNYRFWKSENSTIIA 152
+K+EV + +G N + W + +R +L +G + + + P T W + +
Sbjct: 4 VKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAED--WADLDERAAS 61
Query: 153 WLLSTMESTIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQAKQSDRDVTTY 212
+ + + + TA+ +W +++ Y +++++ LK +L+ S+ T +
Sbjct: 62 AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLY-LKKQLYALHMSEG--TNF 118
Query: 213 YNELMALWQELDLCYDDNWRCTEDSVLFLKRQENDRVFVLLAGLNNCLDEVRGRIL-GRI 271
+ L N T+ + L +K +E D+ +LL L + D + IL G+
Sbjct: 119 LSHLNVF----------NGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKT 168
Query: 272 PLPTLQETFSEVRREEARQS--------VMMGKSASITESSALVTKGNEEGKRDGKKPF- 322
+ T + + E+ R+ + G+ S SS + GK +
Sbjct: 169 TIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSR 228
Query: 323 ---CDHCNRQWHTRDTCWKLHGKPPNWKKKGGKEGRALQATTSDQEHQSSSSSFPFTKEQ 379
C +CN+ H + C PN +K G+ TS Q++ ++++ +
Sbjct: 229 VRNCYNCNQPGHFKRDC-------PNPRKGKGE--------TSGQKNDDNTAAMVQNNDN 273
Query: 380 LDQLYKMFGSQTPSCSIAQIGNFPNTALVSVKPSPTWIIDSGATDHMTGESSLFASYSPC 439
+ +F ++ C P W++D+ A+ H T LF Y
Sbjct: 274 V----VLFINEEEECMHLS------------GPESEWVVDTAASHHATPVRDLFCRY--V 315
Query: 440 AGNH-KIKIADGSLSAIAG 457
AG+ +K+ + S S IAG
Sbjct: 316 AGDFGTVKMGNTSYSKIAG 334
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 372 bits (955), Expect = e-102
Identities = 237/672 (35%), Positives = 360/672 (53%), Gaps = 43/672 (6%)
Query: 545 SNQNHNEQILDIDSNEEEPEMPQQNDSNKETKNRF-NSSDPIWKGNVYERRDHKRGDEGP 603
S + N Q L E P NDS K + F N S N+ +D K ++
Sbjct: 748 SKECDNIQFLKDSKESENKNFP--NDSRKIIQTEFPNESKEC--DNIQFLKDSKESNKYF 803
Query: 604 ILQPCQESEPRNDPNH--------HPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIRKP 655
+ ES+ R +H +PN + S K I D I I R+
Sbjct: 804 L----NESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKND-GIEIINRRS 858
Query: 656 VRSCTKHPMAKFVSYSNLSSSFAAFTSQLSTV--EIPKNVQEAL---KIPKWKEAVLEEM 710
R TK +SY+ +S T+ ++P + E W+EA+ E+
Sbjct: 859 ERLKTKPQ----ISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTEL 914
Query: 711 RALEKNKTWKIMTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSET 770
A + N TW I P KN V +WVF+VKYN RYKARLVA+GFTQ Y IDY ET
Sbjct: 915 NAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEET 974
Query: 771 FAPVAKLNTVRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLNVCK 830
FAPVA++++ R +LSL + + ++Q+DVK AFLNG L+EE+YM P G NVCK
Sbjct: 975 FAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSD-NVCK 1033
Query: 831 LQKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLF-MRFSNDGKIAILIVYVDDIIL 889
L K++YGLKQ+ R WFE F ++K+ ++ + D ++ + N + +++YVDD+++
Sbjct: 1034 LNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVI 1093
Query: 890 TGDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMS 949
D+ M+ K+ L ++F + DL +K+F+G+ + I +SQ Y+ +L + M
Sbjct: 1094 ATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNME 1153
Query: 950 GCRPADTPM--ELNAKLW---EKGNVPVDIGRYQRLVGKLIY-LAHTRPDIAFSVSVVSQ 1003
C TP+ ++N +L E N P + L+G L+Y + TRPD+ +V+++S+
Sbjct: 1154 NCNAVSTPLPSKINYELLNSDEDCNTPC-----RSLIGCLMYIMLCTRPDLTTAVNILSR 1208
Query: 1004 FMHSPYEEHLEAVYRILRYLKSNPGKGLYFKK--TNDRDVSIFTDADWAGSVIDRKSTTG 1061
+ E + + R+LRYLK L FKK + + + D+DWAGS IDRKSTTG
Sbjct: 1209 YSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTG 1268
Query: 1062 YCAYVWG-NLVTWRSKKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKL 1120
Y ++ NL+ W +K+Q VA SS EAE+ A+ + + E LW++ LL + +K++ P+K+
Sbjct: 1269 YLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKI 1328
Query: 1121 FCDSKAAISIAHNPVQHDRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLAR 1180
+ D++ ISIA+NP H R KHI+I HF +E++ + ICL Y+ + Q ADI TK L
Sbjct: 1329 YEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPA 1388
Query: 1181 PNFERLIVKLGM 1192
F L KLG+
Sbjct: 1389 ARFVELRDKLGL 1400
Score = 41.2 bits (95), Expect = 0.017
Identities = 81/381 (21%), Positives = 143/381 (37%), Gaps = 91/381 (23%)
Query: 95 KFEVQRLDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTTDPNYRFWKSEN---STII 151
K ++ DG+ Y W +R +L + L + G MP+ D +++ K+E STII
Sbjct: 5 KRNIKPFDGEKYAIWKFRIRALLAEQDVLKVVDG--LMPNEVDDSWK--KAERCAKSTII 60
Query: 152 AWLLSTMESTIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQAK-QSDRDVT 210
+L + + TA+ + + + A Y +S++ L+ RL K S+ +
Sbjct: 61 EYLSDSFLNFATSDI----TARQILENLDAVYERKSLASQLA-LRKRLLSLKLSSEMSLL 115
Query: 211 TYYNELMALWQELDLCYDDNWRCTEDSVLFLKRQENDRVFVLLAGLNNCLDEVRGRILGR 270
++++ L EL K +E D++ LL L +C D + I
Sbjct: 116 SHFHIFDELISEL-------------LAAGAKIEEMDKISHLLITLPSCYDGIITAI--- 159
Query: 271 IPLPTLQE---TFSEVRREEARQSVMMGKSASITESSAL-------------------VT 308
TL E T + V+ Q + + + T + VT
Sbjct: 160 ---ETLSEENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVT 216
Query: 309 KGNEEGKRDGK-KPFCDHCNRQWHTRDTCWKLHGKPPNWKKKGGKEGRALQATTSDQEHQ 367
K + K + K K C HC R+ H + C+ H K R L + E Q
Sbjct: 217 KPKKIFKGNSKYKVKCHHCGREGHIKKDCF--HYK------------RILNNKNKENEKQ 262
Query: 368 SSSSSFPFTKEQLDQLYKMFGSQTPSCSIAQIGNFPNTALVSVKPSPTWIIDSGATDHMT 427
+++ S + + ++ N SV + +++DSGA+DH+
Sbjct: 263 VQTAT----------------SHGIAFMVKEVNN------TSVMDNCGFVLDSGASDHLI 300
Query: 428 GESSLFASYSPCAGNHKIKIA 448
+ SL+ KI +A
Sbjct: 301 NDESLYTDSVEVVPPLKIAVA 321
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 176 bits (447), Expect = 3e-43
Identities = 88/223 (39%), Positives = 131/223 (58%)
Query: 880 LIVYVDDIILTGDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYI 939
L++YVDDI+LTG ++ L L+ F +KDLG + YFLG+++ G+ +SQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 940 LDLLEETGMSGCRPADTPMELNAKLWEKGNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVS 999
+L GM C+P TP+ L D ++ +VG L YL TRPDI+++V+
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 122
Query: 1000 VVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKST 1059
+V Q MH P + + R+LRY+K GLY K + +V F D+DWAG R+ST
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 182
Query: 1060 TGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLW 1102
TG+C ++ N+++W +K+Q V+RSS E E+RA+A EL W
Sbjct: 183 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 172 bits (437), Expect = 4e-42
Identities = 109/310 (35%), Positives = 181/310 (58%), Gaps = 8/310 (2%)
Query: 797 LDVKNAFLNGDLQEEVYMDSPPGFEDKFGLN-VCKLQKSLYGLKQSPRAWFEKFTWSVKK 855
+DV AFLN + E +Y+ PPGF ++ + V +L +YGLKQ+P W E ++KK
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 856 QGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDRLKKNLAKEFEIKDLGA 915
G+ + + +H L+ R ++DG I I VYVDD+++ DR+K+ L K + +KDLG
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIG-VYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 119
Query: 916 LKYFLGMEVARSRKG-IVVSQRKYILDLLEETGMSGCRPADTPMELNAKLWEKGNVPV-D 973
+ FLG+ + +S G I +S + YI E+ ++ + TP+ + L+E + + D
Sbjct: 120 VDKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKD 179
Query: 974 IGRYQRLVGKLIYLAHT-RPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLY 1032
I YQ +VG+L++ A+T RPDI++ VS++S+F+ P HLE+ R+LRYL + L
Sbjct: 180 ITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLK 239
Query: 1033 FKKTNDRDVSIFTDADWAGSVID-RKSTTGYCAYVWGNLVTWRSKK-QGVVARSSAEAEF 1090
++ + ++++ DA G++ D ST GY + G VTW SKK +GV+ S EAE+
Sbjct: 240 YRSGSQVALTVYCDAS-HGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEY 298
Query: 1091 RAMAQGICEL 1100
++ + E+
Sbjct: 299 ITASETVMEI 308
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 152 bits (384), Expect = 5e-36
Identities = 177/685 (25%), Positives = 298/685 (42%), Gaps = 60/685 (8%)
Query: 534 NEVPTNSGATFSNQNHN----EQILDIDSNEEEPEMPQQNDSNKETKNRFNSSDPIWKG- 588
N+ TN F +NH+ E I+D+ S++ + E Q+ +N + + + P G
Sbjct: 1130 NDYSTNKVEKFEKENHHPPPIEDIVDM-SDQTDMESNCQDGNNLKELKVTDKNVPTDNGT 1188
Query: 589 NVYERRDHKRGDEGPILQPCQESEPRNDPNHHPNPGKSSIPKCRGKSSSITTSDDPDLHI 648
NV R + G +Q +S N N + K K++S+T+ +
Sbjct: 1189 NVSPRLEQNIEASGSPVQTVNKSAFLNKEFSSLNMKRKR--KRHDKNNSLTSYE------ 1240
Query: 649 PIAIRKPVRSCTKHPMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLE 708
R RS K K + + + S + I KN K ++K+A +
Sbjct: 1241 --LERDKKRS--KKNRVKLIPDNMETVSAPKIRAIYYNEAISKNPDLKEK-HEYKQAYHK 1295
Query: 709 EMRALEKNKTWKIMTLPAGKNT-----VGCKWVFTVKYNSDNTVERYKARLVAKGFTQAY 763
E++ L+ K + + + V +FT K N YKAR+V +G TQ+
Sbjct: 1296 ELQNLKDMKVFDVDVKYSRSEIPDNLIVPTNTIFTKKRNGI-----YKARIVCRGDTQSP 1350
Query: 764 GIDYSETFAPVAKLNTVRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDK 823
YS N +++ L +A N + + LD+ +AFL L+EE+Y+ P D+
Sbjct: 1351 DT-YSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLEEEIYIPHP---HDR 1406
Query: 824 FGLNVCKLQKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVY 883
V KL K+LYGLKQSP+ W + + G L+ + K ++ VY
Sbjct: 1407 --RCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGLYQ---TEDKNLMIAVY 1461
Query: 884 VDDIILTGDDIVEMDRLKKNLAKEFEIKDLGAL------KYFLGMEVARSRK--GIVVSQ 935
VDD ++ + +D L FE+K G L LGM++ +++ I ++
Sbjct: 1462 VDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMDLVYNKRLGTIDLTL 1521
Query: 936 RKYI--LDLLEETGMSGCRPADTPMELNAKLWEKGNV--------PVDIGRYQRLVGKLI 985
+ +I +D + R + P K+ K +V + + Q+L+G+L
Sbjct: 1522 KSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFRQGVLKLQQLLGELN 1581
Query: 986 YLAHT-RPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKK--TNDRDVS 1042
Y+ H R DI F+V V++ ++ P+E +Y+I++YL G+++ + D+ V
Sbjct: 1582 YVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQYLVRYKDIGIHYDRDCNKDKKVI 1641
Query: 1043 IFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLW 1102
TDA GS D +S G + N+ S K SS EAE A+ +G +
Sbjct: 1642 AITDAS-VGSEYDAQSRIGVILWYGMNIFNVYSNKSTNRCVSSTEAELHAIYEGYADSET 1700
Query: 1103 IQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHDRTKHIEIDRHFIKEKIVSGTICLP 1162
++ L+EL + + + DSK AI + Q + K I IKEKI +I L
Sbjct: 1701 LKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFTWIKTEIIKEKIKEKSIKLL 1760
Query: 1163 YVTSNEQTADILTKSLARPNFERLI 1187
+T AD+LTK ++ +F+R I
Sbjct: 1761 KITGKGNIADLLTKPVSASDFKRFI 1785
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 132 bits (332), Expect = 6e-30
Identities = 178/747 (23%), Positives = 327/747 (42%), Gaps = 125/747 (16%)
Query: 496 PDFKDQPQQIMLSQNSETNIGAPKENAQESIMELNPLVNEVPTNSGATFSNQNHNEQIL- 554
P DQ + + S + +P EN N N VP + T S QN E I+
Sbjct: 651 PQISDQETEKRIIHRSPSIDASPPEN--------NSSHNIVPIKTPTTVSEQNTEESIIA 702
Query: 555 DIDSNEEEPEMPQQ-NDSNKE-----TKNRFNSSDPIWKGNVYERRDHKRGDEGPILQPC 608
D+ + PE P + D KE ++ +S I N Y + K+
Sbjct: 703 DLPLPDLPPESPTEFPDPFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLED----- 757
Query: 609 QESEPRNDPNHHPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIR-----KPVRSCTKHP 663
E+E + + S+ R K +H+ A++ KP+R+ ++
Sbjct: 758 NETEIKVSRDTWNTKNMRSLEPPRSKKR---------IHLIAAVKAVKSIKPIRTTLRYD 808
Query: 664 MAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMT 723
A ++Y+ K+++E K+ +A +E+ L K KTW
Sbjct: 809 EA--ITYN-------------------KDIKEK---EKYIQAYHKEVNQLLKMKTWDTDR 844
Query: 724 LPAGKN-----TVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLN 778
K + ++F K D T +KAR VA+G I + +T+ P + N
Sbjct: 845 YYDRKEIDPKRVINSMFIFNRK--RDGT---HKARFVARG-----DIQHPDTYDPGMQSN 894
Query: 779 TVR-----VLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPP--GFEDKFGLNVCKL 831
TV LSLA++ ++ + QLD+ +A+L D++EE+Y+ PP G DK + +L
Sbjct: 895 TVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK----LIRL 950
Query: 832 QKSLYGLKQSPRAWFEKF-TWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILT 890
+KSLYGLKQS W+E ++ +K+ G + + +F + ++ I + +VDD+IL
Sbjct: 951 KKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF----KNSQVTICL-FVDDMILF 1005
Query: 891 GDDIVEMDRLKKNLAKEFEIK--DLG----ALKY-FLGMEVARSR-----KGIVVSQRKY 938
D+ ++ L K+++ K +LG ++Y LG+E+ R G+ S +
Sbjct: 1006 SKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEK 1065
Query: 939 ILDL----------LEETGMSGCRPADTPMELNAKLWEKGNVPVDIGRYQRLVGKLIYLA 988
I L L G G +EL E+ + + + Q+L+G Y+
Sbjct: 1066 IPKLNVPLNPKGRKLSAPGQPGLYIDQQELEL-----EEDDYKMKVHEMQKLIGLASYVG 1120
Query: 989 HT-RPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTN----DRDVSI 1043
+ R D+ + ++ ++Q + P ++ L+ Y +++++ + K L + K+ + +
Sbjct: 1121 YKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVV 1180
Query: 1044 FTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLWI 1103
+DA + G+ KS G + G ++ +S K + S+ EAE A+++ + L +
Sbjct: 1181 ISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNL 1239
Query: 1104 QKLLEELKLKIDLPLKLFCDSKAAIS-IAHNPVQHDRTKHIEIDRHFIKEKIVSGTICLP 1162
L++EL K + L DSK+ IS I N + R + +++++ + +
Sbjct: 1240 SHLVQELNKK-PITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVC 1298
Query: 1163 YVTSNEQTADILTKSLARPNFERLIVK 1189
Y+ + + AD++TK L F+ L K
Sbjct: 1299 YIETKKNIADVMTKPLPIKTFKLLTNK 1325
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 129 bits (323), Expect = 6e-29
Identities = 178/748 (23%), Positives = 318/748 (41%), Gaps = 127/748 (16%)
Query: 496 PDFKDQPQQIMLSQNSETNIGAPKENAQESIMELNPLVNEVPTNSGATFSNQNHNEQIL- 554
P DQ + + S + +P EN N N VP + T S QN E I+
Sbjct: 651 PQISDQETEKRIIHRSPSIDASPPEN--------NSSHNIVPIKTPTTVSEQNTEESIIA 702
Query: 555 DIDSNEEEPEMPQQ-NDSNKE----TKNRFNSS-DPIWKGNVYERRDHKRGDEGPILQPC 608
D+ + PE P + D KE ++ NSS I N Y + K+
Sbjct: 703 DLPLPDLPPESPTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLED----- 757
Query: 609 QESEPRNDPNHHPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIR-----KPVRSCTKHP 663
E+E + + S+ R K +H+ A++ KP+R+ ++
Sbjct: 758 NETEIKVSRDTWNTKNMRSLEPPRSKKR---------IHLIAAVKAVKSIKPIRTTLRYD 808
Query: 664 MAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMT 723
A ++Y+ K+++E K+ EA +E+ L K KTW
Sbjct: 809 EA--ITYN-------------------KDIKEK---EKYIEAYHKEVNQLLKMKTWDTDE 844
Query: 724 LPAGKN-----TVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLN 778
K + ++F K D T +KAR VA+G I + +T+ + N
Sbjct: 845 YYDRKEIDPKRVINSMFIFNKK--RDGT---HKARFVARG-----DIQHPDTYDSGMQSN 894
Query: 779 TVR-----VLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPP--GFEDKFGLNVCKL 831
TV LSLA++ ++ + QLD+ +A+L D++EE+Y+ PP G DK + +L
Sbjct: 895 TVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK----LIRL 950
Query: 832 QKSLYGLKQSPRAWFEKF-TWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILT 890
+KSLYGLKQS W+E ++ +K+ G + + +F + ++ I + +VDD+IL
Sbjct: 951 KKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF----KNSQVTICL-FVDDMILF 1005
Query: 891 GDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSG 950
D+ ++ L K+++ K + LG + I+ + KY + GM
Sbjct: 1006 SKDLNANKKIITTLKKQYDTKIIN-----LGESDNEIQYDILGLEIKYQRGKYMKLGMEN 1060
Query: 951 CRPADTPMELNAKLWEKG---NVPVDIGRY--------------------QRLVGKLIYL 987
P +LN L KG + P G Y Q+L+G Y+
Sbjct: 1061 SLTEKIP-KLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYV 1119
Query: 988 AHT-RPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTN----DRDVS 1042
+ R D+ + ++ ++Q + P + L+ Y +++++ K L + K D +
Sbjct: 1120 GYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLV 1179
Query: 1043 IFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLW 1102
+DA + G+ KS G + G ++ +S K + S+ EAE A+++ + L
Sbjct: 1180 AISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNN 1238
Query: 1103 IQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHD-RTKHIEIDRHFIKEKIVSGTICL 1161
+ L++EL K + L DS++ ISI + + R + +++++ + +
Sbjct: 1239 LSYLIQELNKK-PIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYV 1297
Query: 1162 PYVTSNEQTADILTKSLARPNFERLIVK 1189
Y+ + + AD++TK L F+ L K
Sbjct: 1298 YYIETKKNIADVMTKPLPIKTFKLLTNK 1325
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 128 bits (321), Expect = 1e-28
Identities = 179/748 (23%), Positives = 317/748 (41%), Gaps = 127/748 (16%)
Query: 496 PDFKDQPQQIMLSQNSETNIGAPKENAQESIMELNPLVNEVPTNSGATFSNQNHNEQIL- 554
P DQ + + S + +P EN N N VP + T S QN E I+
Sbjct: 651 PQISDQETEKRIIHRSPSIDASPPEN--------NSSHNIVPIKTPTTVSEQNTEESIIA 702
Query: 555 DIDSNEEEPEMPQQ-NDSNKE----TKNRFNSS-DPIWKGNVYERRDHKRGDEGPILQPC 608
D+ + PE P + D KE ++ NSS I N Y + K+
Sbjct: 703 DLPLPDLPPESPTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLED----- 757
Query: 609 QESEPRNDPNHHPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIR-----KPVRSCTKHP 663
E+E + + S+ R K +H+ A++ KP+R+ ++
Sbjct: 758 NETEIKVSRDTWNTKNMRSLEPPRSKKR---------IHLIAAVKAVKSIKPIRTTLRYD 808
Query: 664 MAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMT 723
A ++Y+ K+++E K+ EA +E+ L K TW
Sbjct: 809 EA--ITYN-------------------KDIKEK---EKYIEAYHKEVNQLLKMNTWDTDK 844
Query: 724 LPAGKN-----TVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLN 778
K + ++F K D T +KAR VA+G I + +T+ + N
Sbjct: 845 YYDRKEIDPKRVINSMFIFNRK--RDGT---HKARFVARG-----DIQHPDTYDSGMQSN 894
Query: 779 TVR-----VLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPP--GFEDKFGLNVCKL 831
TV LSLA++ ++ + QLD+ +A+L D++EE+Y+ PP G DK + +L
Sbjct: 895 TVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK----LIRL 950
Query: 832 QKSLYGLKQSPRAWFEKF-TWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILT 890
+KSLYGLKQS W+E ++ +K+ G + + +F + ++ I + +VDD+IL
Sbjct: 951 KKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF----KNSQVTICL-FVDDMILF 1005
Query: 891 GDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSG 950
D+ ++ L K+++ K + LG + I+ + KY + GM
Sbjct: 1006 SKDLNANKKIITTLKKQYDTKIIN-----LGESDNEIQYDILGLEIKYQRGKYMKLGMEN 1060
Query: 951 CRPADTPMELNAKLWEKG---NVPVDIGRY--------------------QRLVGKLIYL 987
P +LN L KG + P G Y Q+L+G Y+
Sbjct: 1061 SLTEKIP-KLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYV 1119
Query: 988 AHT-RPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTN----DRDVS 1042
+ R D+ + ++ ++Q + P + L+ Y +++++ K L + K D +
Sbjct: 1120 GYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLV 1179
Query: 1043 IFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLW 1102
+DA + G+ KS G + G ++ +S K + S+ EAE A+++ + L
Sbjct: 1180 AISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNN 1238
Query: 1103 IQKLLEELKLKIDLPLKLFCDSKAAIS-IAHNPVQHDRTKHIEIDRHFIKEKIVSGTICL 1161
+ L++EL K + L DSK+ IS I N + R + +++++ + +
Sbjct: 1239 LSHLVQELNKK-PITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHV 1297
Query: 1162 PYVTSNEQTADILTKSLARPNFERLIVK 1189
Y+ + + AD++TK L F+ L K
Sbjct: 1298 CYIETKKNIADVMTKPLPIKTFKLLTNK 1325
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 126 bits (317), Expect = 3e-28
Identities = 176/748 (23%), Positives = 326/748 (43%), Gaps = 119/748 (15%)
Query: 495 GPDFKDQPQQIMLSQNSETNIGAPKENAQESIMELNPLVNEVPTNSGATFSNQNHNEQIL 554
G + K PQ Q +E I + S E N L + VP + T +N E I+
Sbjct: 644 GTNNKTVPQTS--EQETEKRIIHRSPSIDTSSSESNSLHHVVPIKTSDTCPKENTEESII 701
Query: 555 -DIDSNEEEPEMPQQ-NDSNKE-----TKNRFNSSDPIWKGNVYERRDHKRGDEGPILQP 607
D+ + PE P + +DS KE ++ +S I N Y + K+
Sbjct: 702 ADLPLPDLPPEPPTELSDSFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLED---- 757
Query: 608 CQESEPRNDPNHHPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIR-----KPVRSCTKH 662
E+E + + S+ R K +H+ A++ KP+R+ ++
Sbjct: 758 -NETEIKVSRDTWNTKNMRSLEPPRSKKR---------IHLIAAVKAVKSIKPIRTTLRY 807
Query: 663 PMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIM 722
A ++Y+ K+++E K+ EA +E+ L K KTW
Sbjct: 808 DEA--ITYN-------------------KDIKEK---EKYIEAYHKEVNQLLKMKTWDTD 843
Query: 723 TLPAGKN-----TVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKL 777
K + ++F K D T +KAR VA+G I + +T+ +
Sbjct: 844 KYYDRKEIDPKRVINSMFIFNRK--RDGT---HKARFVARG-----DIQHPDTYDSGMQS 893
Query: 778 NTVR-----VLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPP--GFEDKFGLNVCK 830
NTV LSLA++ ++ + QLD+ +A+L D++EE+Y+ PP G DK + +
Sbjct: 894 NTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK----LIR 949
Query: 831 LQKSLYGLKQSPRAWFEKF-TWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIIL 889
L+KSLYGLKQS W+E ++ +K+ G + + +F + + ++VDD++L
Sbjct: 950 LKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF-----ENSQVTICLFVDDMVL 1004
Query: 890 TGDDIVEMDRLKKNLAKEFEIK--DLG----ALKY-FLGMEVARSR-----KGIVVSQRK 937
++ R+ L +++ K +LG ++Y LG+E+ R G+ S +
Sbjct: 1005 FSKNLNSNKRIIDKLKMQYDTKIINLGESDEEIQYDILGLEIKYQRGKYMKLGMENSLTE 1064
Query: 938 YILDL----------LEETGMSGCRPADTPMELNAKLWEKGNVPVDIGRYQRLVGKLIYL 987
I L L G G +EL E+ + + + Q+L+G Y+
Sbjct: 1065 KIPKLNVPLNPKGRKLSAPGQPGLYIDQQELEL-----EEDDYKMKVHEMQKLIGLASYV 1119
Query: 988 AHT-RPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTN----DRDVS 1042
+ R D+ + ++ ++Q + P ++ L+ Y +++++ + K L + K+ +
Sbjct: 1120 GYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLV 1179
Query: 1043 IFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLW 1102
+ +DA + G+ KS G + G ++ +S K + S+ EAE A+++ + L
Sbjct: 1180 VISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNN 1238
Query: 1103 IQKLLEELKLKIDLPLKLFCDSKAAIS-IAHNPVQHDRTKHIEIDRHFIKEKIVSGTICL 1161
+ L++EL K + L DSK+ IS I N + R + +++++ + +
Sbjct: 1239 LSYLIQELDKK-PITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHV 1297
Query: 1162 PYVTSNEQTADILTKSLARPNFERLIVK 1189
Y+ + + AD++TK L F+ L K
Sbjct: 1298 CYIETKKNIADVMTKPLPIKTFKLLTNK 1325
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 126 bits (317), Expect = 3e-28
Identities = 175/747 (23%), Positives = 326/747 (43%), Gaps = 125/747 (16%)
Query: 496 PDFKDQPQQIMLSQNSETNIGAPKENAQESIMELNPLVNEVPTNSGATFSNQNHNEQIL- 554
P DQ + + S + +P EN N N VP + T S QN E I+
Sbjct: 1078 PQISDQETEKRIIHRSPSIDASPPEN--------NSSHNIVPIKTPTTVSEQNTEESIIA 1129
Query: 555 DIDSNEEEPEMPQQ-NDSNKE-----TKNRFNSSDPIWKGNVYERRDHKRGDEGPILQPC 608
D+ + PE P + D KE ++ +S I N Y + K+
Sbjct: 1130 DLPLPDLPPESPTEFPDPFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLED----- 1184
Query: 609 QESEPRNDPNHHPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIR-----KPVRSCTKHP 663
E+E + + S+ R K +H+ A++ KP+R+ ++
Sbjct: 1185 NETEIKVSRDTWNTKNMRSLEPPRSKKR---------IHLIAAVKAVKSIKPIRTTLRYD 1235
Query: 664 MAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMT 723
A ++Y+ K+++E K+ EA +E+ L K KTW
Sbjct: 1236 EA--ITYN-------------------KDIKEK---EKYIEAYHKEVNQLLKMKTWDTDE 1271
Query: 724 LPAGKN-----TVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLN 778
K + ++F K D T +KAR VA+G I + +T+ + N
Sbjct: 1272 YYDRKEIDPKRVINSMFIFNKK--RDGT---HKARFVARG-----DIQHPDTYDSGMQSN 1321
Query: 779 TVR-----VLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPP--GFEDKFGLNVCKL 831
TV LSLA++ ++ + QLD+ +A+L D++EE+Y+ PP G DK + +L
Sbjct: 1322 TVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK----LIRL 1377
Query: 832 QKSLYGLKQSPRAWFEKF-TWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILT 890
+KSLYGLKQS W+E ++ +++ G + + +F + ++ I + +VDD++L
Sbjct: 1378 KKSLYGLKQSGANWYETIKSYLIQQCGMEEVRGWSCVF----KNSQVTICL-FVDDMVLF 1432
Query: 891 GDDIVEMDRLKKNLAKEFEIK--DLG----ALKY-FLGMEVARSR-----KGIVVSQRKY 938
++ R+ + L +++ K +LG ++Y LG+E+ R G+ S +
Sbjct: 1433 SKNLNSNKRIIEKLKMQYDTKIINLGESDEEIQYDILGLEIKYQRGKYMKLGMENSLTEK 1492
Query: 939 ILDL----------LEETGMSGCRPADTPMELNAKLWEKGNVPVDIGRYQRLVGKLIYLA 988
I L L G G +EL E+ + + + Q+L+G Y+
Sbjct: 1493 IPKLNVPLNPKGRKLSAPGQPGLYIDQQELEL-----EEDDYKMKVHEMQKLIGLASYVG 1547
Query: 989 HT-RPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTN----DRDVSI 1043
+ R D+ + ++ ++Q + P ++ L+ Y +++++ + K L + K+ + +
Sbjct: 1548 YKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVV 1607
Query: 1044 FTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLWI 1103
+DA + G+ KS G + G ++ +S K + S+ EAE A+++ + L +
Sbjct: 1608 ISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNL 1666
Query: 1104 QKLLEELKLKIDLPLKLFCDSKAAIS-IAHNPVQHDRTKHIEIDRHFIKEKIVSGTICLP 1162
L++EL K + L DSK+ IS I N + R + +++++ + +
Sbjct: 1667 SYLIQELDKK-PITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVC 1725
Query: 1163 YVTSNEQTADILTKSLARPNFERLIVK 1189
Y+ + + AD++TK L F+ L K
Sbjct: 1726 YIETKKNIADVMTKPLPIKTFKLLTNK 1752
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 126 bits (316), Expect = 4e-28
Identities = 177/748 (23%), Positives = 317/748 (41%), Gaps = 127/748 (16%)
Query: 496 PDFKDQPQQIMLSQNSETNIGAPKENAQESIMELNPLVNEVPTNSGATFSNQNHNEQIL- 554
P DQ + + S + +P EN N N VP + T S QN E I+
Sbjct: 1078 PQISDQETEKRIIHRSPSIDASPPEN--------NSSHNIVPIKTPTTVSEQNTEESIIA 1129
Query: 555 DIDSNEEEPEMPQQ-NDSNKE----TKNRFNSS-DPIWKGNVYERRDHKRGDEGPILQPC 608
D+ + PE P + D KE ++ NSS I N Y + K+
Sbjct: 1130 DLPLPDLPPESPTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLED----- 1184
Query: 609 QESEPRNDPNHHPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIR-----KPVRSCTKHP 663
E+E + + S+ R K +H+ A++ KP+R+ ++
Sbjct: 1185 NETEIKVSRDTWNTKNMRSLEPPRSKKR---------IHLIAAVKAVKSIKPIRTTLRYD 1235
Query: 664 MAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMT 723
A ++Y+ K+++E K+ EA +E+ L K KTW
Sbjct: 1236 EA--ITYN-------------------KDIKEK---EKYIEAYHKEVNQLLKMKTWDTDE 1271
Query: 724 LPAGKN-----TVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLN 778
K + ++F K D T +KAR VA+G I + +T+ + N
Sbjct: 1272 YYDRKEIDPKRVINSMFIFNKK--RDGT---HKARFVARG-----DIQHPDTYDTGMQSN 1321
Query: 779 TVR-----VLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPP--GFEDKFGLNVCKL 831
TV LSLA++ ++ + QLD+ +A+L D++EE+Y+ PP G DK + +L
Sbjct: 1322 TVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK----LIRL 1377
Query: 832 QKSLYGLKQSPRAWFEKF-TWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILT 890
+KS YGLKQS W+E ++ +K+ G + + +F + ++ I + +VDD+IL
Sbjct: 1378 KKSHYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVF----KNSQVTICL-FVDDMILF 1432
Query: 891 GDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSG 950
D+ ++ L K+++ K + LG + I+ + KY + GM
Sbjct: 1433 SKDLNANKKIITTLKKQYDTKIIN-----LGESDNEIQYDILGLEIKYQRGKYMKLGMEN 1487
Query: 951 CRPADTPMELNAKLWEKG---NVPVDIGRY--------------------QRLVGKLIYL 987
P +LN L KG + P G Y Q+L+G Y+
Sbjct: 1488 SLTEKIP-KLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYV 1546
Query: 988 AHT-RPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTN----DRDVS 1042
+ R D+ + ++ ++Q + P + L+ Y +++++ K L + K D +
Sbjct: 1547 GYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLV 1606
Query: 1043 IFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLW 1102
+DA + G+ KS G + G ++ +S K + S+ EAE A+++ + L
Sbjct: 1607 AISDASY-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNN 1665
Query: 1103 IQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHD-RTKHIEIDRHFIKEKIVSGTICL 1161
+ L++EL K + L DS++ ISI + + R + +++++ + +
Sbjct: 1666 LSYLIQELNKK-PIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYV 1724
Query: 1162 PYVTSNEQTADILTKSLARPNFERLIVK 1189
Y+ + + AD++TK L F+ L K
Sbjct: 1725 YYIETKKNIADVMTKPLPIKTFKLLTNK 1752
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 119 bits (297), Expect = 6e-26
Identities = 132/529 (24%), Positives = 233/529 (43%), Gaps = 65/529 (12%)
Query: 701 KWKEAVLEEMRALEKNKTWKIMTLPAGKNTVGCKWV----FTVKYNSDNTVERYKARLVA 756
++ EA +E+ L K TW +N + K V F D T +KAR VA
Sbjct: 1264 RYVEAYHKEISQLLKMNTWDTNKY-YDRNDIDPKKVINSMFIFNKKRDGT---HKARFVA 1319
Query: 757 KGFTQAYGIDYSETFAPVAKLNTVR-----VLLSLAVNLDWPLNQLDVKNAFLNGDLQEE 811
+G I + +T+ + NTV LS+A++ D+ + QLD+ +A+L D++EE
Sbjct: 1320 RG-----DIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEE 1374
Query: 812 VYMDSPP--GFEDKFGLNVCKLQKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFM 869
+Y+ PP G DK + +L+KSLYGLKQS W+E + MQ +
Sbjct: 1375 LYIRPPPHLGLNDK----LLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVF 1430
Query: 870 RFSNDGKIAILIVYVDDIILTGDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRK 929
+ S + ++VDD+IL D+ ++ L K+++ K + LG +
Sbjct: 1431 KNSQ----VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIIN-----LGESDNEIQY 1481
Query: 930 GIVVSQRKYILDLLEETGMSGCRPADTPMELNAKLWEKG---NVPVDIGRY--------- 977
I+ + KY + GM P +LN L KG P G Y
Sbjct: 1482 DILGLEIKYQRSKYMKLGMEKSLTEKLP-KLNVPLNPKGKKLRAPGQPGHYIDQDELEID 1540
Query: 978 -----------QRLVGKLIYLAHT-RPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKS 1025
Q+L+G Y+ + R D+ + ++ ++Q + P + L+ Y +++++
Sbjct: 1541 EDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWD 1600
Query: 1026 NPGKGLYFKKTN----DRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVV 1081
K L + K D + +DA + G+ KS G + G ++ +S K +
Sbjct: 1601 TRDKQLIWHKNKPTKPDNKLVAISDASY-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLT 1659
Query: 1082 ARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHD-RT 1140
S+ EAE A+++ I L + L++EL K + L DS++ ISI + + R
Sbjct: 1660 CTSTTEAEIHAVSEAIPLLNNLSHLVQELNKK-PIIKGLLTDSRSTISIIKSTNEEKFRN 1718
Query: 1141 KHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVK 1189
+ +++++ + + Y+ + + AD++TK L F+ L K
Sbjct: 1719 RFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNK 1767
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 107 bits (267), Expect = 2e-22
Identities = 51/102 (50%), Positives = 72/102 (70%)
Query: 690 PKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMTLPAGKNTVGCKWVFTVKYNSDNTVER 749
PK+V ALK P W +A+ EE+ AL +NKTW ++ P +N +GCKWVF K +SD T++R
Sbjct: 28 PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87
Query: 750 YKARLVAKGFTQAYGIDYSETFAPVAKLNTVRVLLSLAVNLD 791
KARLVAKGF Q GI + ET++PV + T+R +L++A L+
Sbjct: 88 LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLE 129
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 77.4 bits (189), Expect = 2e-13
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 985 IYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTNDRDVSIF 1044
+YL TRPD+ F+V+ +SQF + ++AVY++L Y+K G+GL++ T+D + F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 1045 TDADWAGSVIDRKSTTGYCAYV 1066
D+DWA R+S TG+C+ V
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
>WAIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein interacting
protein (WASP interacting protein) (PRPL-2 protein)
Length = 503
Score = 53.9 bits (128), Expect = 3e-06
Identities = 34/82 (41%), Positives = 43/82 (51%), Gaps = 2/82 (2%)
Query: 5 NPWKTTTTIPDLTLKTAFMTTTSSGGPTQESETANNGSGPIPIVTNNNGSTTTGSGGSGG 64
N K T + + A ++ S G +++ T N+ S PI G+ G G GG
Sbjct: 19 NTEKPTLNKTEQAGRNALLSDISKGKKLKKTVT-NDRSAPILDKPKGAGAGGGGGGFGGG 77
Query: 65 GG-PGGGGGPGGGSFGGGGPYG 85
GG GGGGG GGGSFGGGGP G
Sbjct: 78 GGFGGGGGGGGGGSFGGGGPPG 99
Score = 38.9 bits (89), Expect = 0.084
Identities = 18/43 (41%), Positives = 21/43 (47%)
Query: 48 VTNNNGSTTTGSGGSGGGGPGGGGGPGGGSFGGGGPYGNNDGY 90
VTN+ + G G GGGG GGG FGGGG G +
Sbjct: 50 VTNDRSAPILDKPKGAGAGGGGGGFGGGGGFGGGGGGGGGGSF 92
Score = 35.0 bits (79), Expect = 1.2
Identities = 17/27 (62%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 58 GSGGSGGGGPGGGGGPG-GGSFGGGGP 83
G GG GGG GGGG PG GG F G P
Sbjct: 83 GGGGGGGGSFGGGGPPGLGGLFQAGMP 109
>DRI_DROME (Q24573) Dead ringer protein (Retained protein)
Length = 911
Score = 53.9 bits (128), Expect = 3e-06
Identities = 32/78 (41%), Positives = 39/78 (49%), Gaps = 14/78 (17%)
Query: 24 TTTSSGGPTQESETA----------NNGS----GPIPIVTNNNGSTTTGSGGSGGGGPGG 69
TT SSG P + A NGS G P ++N+ +TT G G +G GG GG
Sbjct: 155 TTISSGFPLPHNSVAFGHVTSSPSGGNGSSYNGGTTPTNSSNSNATTNGGGTAGPGGTGG 214
Query: 70 GGGPGGGSFGGGGPYGNN 87
GG GGG GGGG G +
Sbjct: 215 SGGGGGGGGGGGGGVGGH 232
Score = 49.7 bits (117), Expect = 5e-05
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 13 IPDLTLKTAFMTTTSSGGPTQESETANNGSGPIPIVTNNNGSTTTGSGGSGGGGPGGGGG 72
+P ++ +T++ SGG + N G+ P TN++ S T +GG G GPGG GG
Sbjct: 163 LPHNSVAFGHVTSSPSGG---NGSSYNGGTTP----TNSSNSNATTNGG-GTAGPGGTGG 214
Query: 73 PGGGSFGGGGPYGNNDGY 90
GGG GGGG G G+
Sbjct: 215 SGGGGGGGGGGGGGVGGH 232
>HXB3_MOUSE (P09026) Homeobox protein Hox-B3 (Hox-2.7) (MH-23)
Length = 433
Score = 52.4 bits (124), Expect = 7e-06
Identities = 31/90 (34%), Positives = 36/90 (39%), Gaps = 29/90 (32%)
Query: 28 SGGPTQESETANNGSGPIPI-----------------------------VTNNNGSTTTG 58
S PT + +NNG GP + N++ T G
Sbjct: 93 SAAPTSTTSNSNNGGGPSKSGPPKCGAGSNSTLTKQIFPWMKESRQTSKLKNSSPGTAEG 152
Query: 59 SGGSGGGGPGGGGGPGGGSFGGGGPYGNND 88
GG GGGG GGGGG GG S GGGG G D
Sbjct: 153 CGGGGGGGGGGGGGGGGSSGGGGGGGGGGD 182
Score = 37.7 bits (86), Expect = 0.19
Identities = 21/54 (38%), Positives = 24/54 (43%), Gaps = 3/54 (5%)
Query: 33 QESETANNGSGPIPIVTNNNGSTTTGSGGSGGGGPGGGGGPGGGSFGGGGPYGN 86
Q S+ N+ G G G GG GGGG GGG GGG G P G+
Sbjct: 138 QTSKLKNSSPGTAEGCGGGGGG---GGGGGGGGGGSSGGGGGGGGGGDKSPPGS 188
>RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX)
(Enhancer factor C) (EF-C)
Length = 979
Score = 51.6 bits (122), Expect = 1e-05
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 24 TTTSSGGPTQESETANNGSGPIPI----VTNNNGSTTTGSGGSGGGGPGGGGGPGGGSFG 79
T T P A++GS P+ + V ++ ST G+ S GGG GGGG GGG G
Sbjct: 337 TATQVSTPATSQAVASSGSMPMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGG 396
Query: 80 GGGPYGNNDGYSNILKFEVQ--RLDGKNYMEWSQTVR 114
GGG G S + +Q + G +S T R
Sbjct: 397 GGGSGSTGGGGSGAGTYVIQGGYMLGSASQSYSHTTR 433
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2
Length = 168
Score = 50.8 bits (120), Expect = 2e-05
Identities = 25/44 (56%), Positives = 26/44 (58%), Gaps = 5/44 (11%)
Query: 53 GSTTTGSGGSGGGGPGGGGG-----PGGGSFGGGGPYGNNDGYS 91
G G GG GGGG GGGGG GGG +GGGG YG N G S
Sbjct: 119 GGRREGGGGYGGGGYGGGGGGYGGREGGGGYGGGGGYGGNRGDS 162
Score = 42.4 bits (98), Expect = 0.008
Identities = 19/28 (67%), Positives = 19/28 (67%)
Query: 58 GSGGSGGGGPGGGGGPGGGSFGGGGPYG 85
G GG GGGG G GG GGG GGGG YG
Sbjct: 92 GGGGYGGGGGGYGGREGGGYGGGGGGYG 119
Score = 42.4 bits (98), Expect = 0.008
Identities = 19/32 (59%), Positives = 20/32 (62%)
Query: 58 GSGGSGGGGPGGGGGPGGGSFGGGGPYGNNDG 89
G GG GG GGGG GGG GGGG YG +G
Sbjct: 114 GGGGYGGRREGGGGYGGGGYGGGGGGYGGREG 145
Score = 42.0 bits (97), Expect = 0.010
Identities = 21/39 (53%), Positives = 22/39 (55%), Gaps = 6/39 (15%)
Query: 58 GSGGSGGGGPGGGGG------PGGGSFGGGGPYGNNDGY 90
G GG GGG GGGGG GGG +GGGG G GY
Sbjct: 102 GYGGREGGGYGGGGGGYGGRREGGGGYGGGGYGGGGGGY 140
Score = 39.7 bits (91), Expect = 0.049
Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 14/82 (17%)
Query: 22 FMTTTSSGGPTQESETANNGSGPIPIVTNNNGSTTTGSGGSGGGGPGGGG---------G 72
F+T +S E N +T N + G GG GG G GGGG G
Sbjct: 53 FVTFSSEQSMLDAIENMNGKELDGRNITVNQAQSRGGGGGGGGYGGGGGGYGGREGGGYG 112
Query: 73 PGGGSFG----GGGPYGNNDGY 90
GGG +G GGG YG GY
Sbjct: 113 GGGGGYGGRREGGGGYGGG-GY 133
Score = 33.5 bits (75), Expect = 3.5
Identities = 15/27 (55%), Positives = 16/27 (58%)
Query: 60 GGSGGGGPGGGGGPGGGSFGGGGPYGN 86
G GGGG GGGGG GG GG + N
Sbjct: 142 GREGGGGYGGGGGYGGNRGDSGGNWRN 168
>PO41_MOUSE (P17208) POU domain, class 4, transcription factor 1
(Brain-specific homeobox/POU domain protein 3A) (Brn-3A)
(Brn-3.0)
Length = 421
Score = 50.4 bits (119), Expect = 3e-05
Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 42 SGPIPIVTNNNGSTTTGSGGS------GGGGPGGGGGPGGGSFGGGGPYGNNDG 89
S + ++ G+ G GG GGGGPGGGGGPGGG GGGG G G
Sbjct: 122 SPSLALMAGAGGAGAAGGGGGAHDGPGGGGGPGGGGGPGGGGPGGGGGGGGPGG 175
Score = 48.9 bits (115), Expect = 8e-05
Identities = 28/72 (38%), Positives = 31/72 (42%), Gaps = 12/72 (16%)
Query: 14 PDLTLKTAFMTTTSSGGPTQESETANNGSGPIPIVTNNNGSTTTGSGGSGGGGPGGGGGP 73
P L L ++GG + G GP G GG GGGGPGGGGG
Sbjct: 123 PSLALMAGAGGAGAAGGGGGAHDGPGGGGGP------------GGGGGPGGGGPGGGGGG 170
Query: 74 GGGSFGGGGPYG 85
GG GGG P G
Sbjct: 171 GGPGGGGGAPGG 182
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,416,584
Number of Sequences: 164201
Number of extensions: 7046033
Number of successful extensions: 73591
Number of sequences better than 10.0: 732
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 35740
Number of HSP's gapped (non-prelim): 11527
length of query: 1199
length of database: 59,974,054
effective HSP length: 122
effective length of query: 1077
effective length of database: 39,941,532
effective search space: 43017029964
effective search space used: 43017029964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)
Medicago: description of AC145330.14