BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145329.3 + phase: 0 /partial
(121 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DJBB_MOUSE (Q99KV1) DnaJ homolog subfamily B member 11 precursor 114 5e-26
DJBB_HUMAN (Q9UBS4) DnaJ homolog subfamily B member 11 precursor... 111 3e-25
DJA2_RAT (O35824) DnaJ homolog subfamily A member 2 (RDJ2) 80 8e-16
DJA2_MOUSE (Q9QYJ0) DnaJ homolog subfamily A member 2 (mDj3) 80 8e-16
DJA2_HUMAN (O60884) DnaJ homolog subfamily A member 2 (HIRA inte... 80 8e-16
DJB1_HUMAN (P25685) DnaJ homolog subfamily B member 1 (Heat shoc... 78 3e-15
DJB1_MOUSE (Q9QYJ3) DnaJ homolog subfamily B member 1 (Heat shoc... 77 9e-15
DNJH_ARATH (P42825) DnaJ protein homolog ATJ2 76 2e-14
PSI1_SCHPO (Q09912) Protein psi1 (Protein psi) 72 2e-13
DNJH_CUCSA (Q04960) DnaJ protein homolog (DNAJ-1) 72 3e-13
TSR6_HUMAN (P59910) Testis spermatocyte apoptosis-related gene 6... 71 4e-13
DNJ1_DROME (Q24133) DnaJ protein homolog 1 (DROJ1) 71 5e-13
DNJH_ATRNU (P43644) DnaJ protein homolog ANJ1 70 8e-13
DNJ2_MYCLE (Q49762) Chaperone protein dnaJ2 70 8e-13
DNJ2_MYCTU (P63966) Chaperone protein dnaJ2 69 2e-12
DNJ2_MYCBO (P63967) Chaperone protein dnaJ2 69 2e-12
DNJ2_ALLPO (P42824) DnaJ protein homolog 2 69 2e-12
DJA4_MOUSE (Q9JMC3) DnaJ homolog subfamily A member 4 (MmDjA4) 69 2e-12
TSR6_MOUSE (Q80Y75) Testis spermatocyte apoptosis-related gene 6... 69 2e-12
DJA4_HUMAN (Q8WW22) DnaJ homolog subfamily A member 4 69 2e-12
>DJBB_MOUSE (Q99KV1) DnaJ homolog subfamily B member 11 precursor
Length = 358
Score = 114 bits (284), Expect = 5e-26
Identities = 63/123 (51%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
E F +GEP +DGE GDLRFRI+ H +F+R G+DL+T VT++LV+ALVGFE I HL
Sbjct: 221 EYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHL 280
Query: 61 DEHLVDISSKGITNPKQVRKFKGEGMP-LHTSTKKGDLYVTFEVLFP-TTLSEEQKTKIK 118
D H V IS IT P KGEG+P + KG L +TF+V FP L+EE K IK
Sbjct: 281 DGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAKEGIK 340
Query: 119 SIL 121
+L
Sbjct: 341 QLL 343
>DJBB_HUMAN (Q9UBS4) DnaJ homolog subfamily B member 11 precursor
(ER-associated dnaJ protein 3) (ErJ3) (ER-associated
Hsp40 co-chaperone) (hDj9) (PWP1-interacting protein 4)
(UNQ537/PRO1080)
Length = 358
Score = 111 bits (278), Expect = 3e-25
Identities = 62/123 (50%), Positives = 79/123 (63%), Gaps = 2/123 (1%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
E F +GEP +DGE GDLRFRI+ H +F+R G+DL+T VTI+LV++LVGFE I HL
Sbjct: 221 EYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHL 280
Query: 61 DEHLVDISSKGITNPKQVRKFKGEGMP-LHTSTKKGDLYVTFEVLFP-TTLSEEQKTKIK 118
D H V IS IT P KGEG+P + KG L +TF+V FP L+EE + IK
Sbjct: 281 DGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIK 340
Query: 119 SIL 121
+L
Sbjct: 341 QLL 343
>DJA2_RAT (O35824) DnaJ homolog subfamily A member 2 (RDJ2)
Length = 412
Score = 80.1 bits (196), Expect = 8e-16
Identities = 43/95 (45%), Positives = 60/95 (62%), Gaps = 3/95 (3%)
Query: 15 ESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHLD--EHLVDISSKGI 72
E GD+ ++ HE+F+R+GNDLH T I LV+AL GF+ T KHLD + +V +
Sbjct: 244 EPGDIVLFVQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKV 303
Query: 73 TNPKQVRKFKGEGMPLHTST-KKGDLYVTFEVLFP 106
P VR +GEGMP + + +KGDLY+ F+V FP
Sbjct: 304 IEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338
>DJA2_MOUSE (Q9QYJ0) DnaJ homolog subfamily A member 2 (mDj3)
Length = 412
Score = 80.1 bits (196), Expect = 8e-16
Identities = 43/95 (45%), Positives = 60/95 (62%), Gaps = 3/95 (3%)
Query: 15 ESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHLD--EHLVDISSKGI 72
E GD+ ++ HE+F+R+GNDLH T I LV+AL GF+ T KHLD + +V +
Sbjct: 244 EPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKV 303
Query: 73 TNPKQVRKFKGEGMPLHTST-KKGDLYVTFEVLFP 106
P VR +GEGMP + + +KGDLY+ F+V FP
Sbjct: 304 IEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338
>DJA2_HUMAN (O60884) DnaJ homolog subfamily A member 2 (HIRA
interacting protein 4) (Cell cycle progression
restoration gene 3 protein) (Dnj3)
Length = 412
Score = 80.1 bits (196), Expect = 8e-16
Identities = 43/95 (45%), Positives = 60/95 (62%), Gaps = 3/95 (3%)
Query: 15 ESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHLD--EHLVDISSKGI 72
E GD+ ++ HE+F+R+GNDLH T I LV+AL GF+ T KHLD + +V +
Sbjct: 244 EPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKV 303
Query: 73 TNPKQVRKFKGEGMPLHTST-KKGDLYVTFEVLFP 106
P VR +GEGMP + + +KGDLY+ F+V FP
Sbjct: 304 IEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP 338
>DJB1_HUMAN (P25685) DnaJ homolog subfamily B member 1 (Heat shock
40 kDa protein 1) (Heat shock protein 40) (HSP40) (DnaJ
protein homolog 1) (HDJ-1)
Length = 339
Score = 78.2 bits (191), Expect = 3e-15
Identities = 39/122 (31%), Positives = 68/122 (54%), Gaps = 1/122 (0%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
++ F ++G+ + D+ F ++ PH +FKR+G+D+ I+L +AL G + L
Sbjct: 216 KITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTL 275
Query: 61 DEHLVDISSKGITNPKQVRKFKGEGMPL-HTSTKKGDLYVTFEVLFPTTLSEEQKTKIKS 119
D + + K + P RK GEG+PL T K+GDL + FEV+FP + + +T ++
Sbjct: 276 DGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQ 335
Query: 120 IL 121
+L
Sbjct: 336 VL 337
>DJB1_MOUSE (Q9QYJ3) DnaJ homolog subfamily B member 1 (Heat shock
40 kDa protein 1) (Heat shock protein 40) (HSP40)
Length = 339
Score = 76.6 bits (187), Expect = 9e-15
Identities = 39/122 (31%), Positives = 67/122 (53%), Gaps = 1/122 (0%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
++ F ++G+ + D+ F ++ PH +FKR+G+D+ I+L +AL G + L
Sbjct: 216 KITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTL 275
Query: 61 DEHLVDISSKGITNPKQVRKFKGEGMPL-HTSTKKGDLYVTFEVLFPTTLSEEQKTKIKS 119
D + + K + P RK GEG+PL T K+GDL + FEV+FP + +T ++
Sbjct: 276 DGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQ 335
Query: 120 IL 121
+L
Sbjct: 336 VL 337
>DNJH_ARATH (P42825) DnaJ protein homolog ATJ2
Length = 419
Score = 75.9 bits (185), Expect = 2e-14
Identities = 44/124 (35%), Positives = 67/124 (53%), Gaps = 3/124 (2%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
++ F + D +GD+ F I+ H FKR+G DL TI+L +AL GF+ + HL
Sbjct: 236 KITFSGQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHL 295
Query: 61 DEHLVDISSK--GITNPKQVRKFKGEGMPLHTST-KKGDLYVTFEVLFPTTLSEEQKTKI 117
D+ + I SK + P + EGMP++ KG LY+ F V FP +LS +Q I
Sbjct: 296 DKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAI 355
Query: 118 KSIL 121
+++L
Sbjct: 356 EAVL 359
>PSI1_SCHPO (Q09912) Protein psi1 (Protein psi)
Length = 379
Score = 72.0 bits (175), Expect = 2e-13
Identities = 40/116 (34%), Positives = 65/116 (55%), Gaps = 1/116 (0%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
++ F +G+ DG D++F + PH +F R G+DL V ++L +AL+GF K I +
Sbjct: 259 KIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQVELSLKEALLGFSKQISTI 318
Query: 61 DEHLVDISSKGITNPKQVRKFKGEGMPL-HTSTKKGDLYVTFEVLFPTTLSEEQKT 115
D + +SS T P + G GMPL +++G++ + +V FPT L+ QKT
Sbjct: 319 DGKKLKVSSSLPTQPGYEITYPGFGMPLPKNPSQRGNMIIECKVKFPTELTPAQKT 374
>DNJH_CUCSA (Q04960) DnaJ protein homolog (DNAJ-1)
Length = 413
Score = 71.6 bits (174), Expect = 3e-13
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
++ F + + D +GD+ F ++ H FKR+G+DL T++LV++L GF+ + HL
Sbjct: 233 KITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHL 292
Query: 61 DEHLVDISS--KGITNPKQVRKFKGEGMPLHTST-KKGDLYVTFEVLFPTTLSEEQKTKI 117
D + I S + P Q + EGMP++ KG LY+ F V FP +L+ EQ +
Sbjct: 293 DGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKAL 352
Query: 118 KSIL 121
+ +L
Sbjct: 353 EGVL 356
>TSR6_HUMAN (P59910) Testis spermatocyte apoptosis-related gene 6
protein (Testis and spermatogenesis cell related protein
6)
Length = 316
Score = 71.2 bits (173), Expect = 4e-13
Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 2 VLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHLD 61
+ F ++G+ + D+ F ++ H F+RE ++L I L +AL ++ LD
Sbjct: 194 ITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLD 253
Query: 62 EHLVDISSKGITNPKQVRKFKGEGMPL-HTSTKKGDLYVTFEVLFPTTLSEEQKTKIKSI 120
+ L++I I +PK +K GEGMPL TKKGDL++ F++ FPT L+ ++K ++
Sbjct: 254 DRLLNIPINDIIHPKYFKKVPGEGMPLPEDPTKKGDLFIFFDIQFPTRLTPQKKQMLRQA 313
Query: 121 L 121
L
Sbjct: 314 L 314
>DNJ1_DROME (Q24133) DnaJ protein homolog 1 (DROJ1)
Length = 334
Score = 70.9 bits (172), Expect = 5e-13
Identities = 40/123 (32%), Positives = 68/123 (54%), Gaps = 2/123 (1%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
++ F ++G+ + D+ F IR PH LFKREG DL T I+L QAL G ++ L
Sbjct: 210 KITFPQEGDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQALCGALVSVPTL 269
Query: 61 DEHLVDIS-SKGITNPKQVRKFKGEGMPL-HTSTKKGDLYVTFEVLFPTTLSEEQKTKIK 118
+ ++ + I P R+ G G+P+ +++GDL V+F++ FP TL+ + ++
Sbjct: 270 QGSRIQVNPNHEIIKPTTTRRINGLGLPVPKEPSRRGDLIVSFDIKFPDTLAPSLQNQLS 329
Query: 119 SIL 121
+L
Sbjct: 330 ELL 332
>DNJH_ATRNU (P43644) DnaJ protein homolog ANJ1
Length = 417
Score = 70.1 bits (170), Expect = 8e-13
Identities = 40/124 (32%), Positives = 67/124 (53%), Gaps = 3/124 (2%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
++ F + + D +GD+ F ++ H FKR+G DL T++L +AL GF + HL
Sbjct: 235 KITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHL 294
Query: 61 DEHLVDISSK--GITNPKQVRKFKGEGMPLHTST-KKGDLYVTFEVLFPTTLSEEQKTKI 117
D + I S + P Q + + EGMP++ KG +Y+ F V FP +L+ +Q +
Sbjct: 295 DGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSL 354
Query: 118 KSIL 121
++IL
Sbjct: 355 EAIL 358
>DNJ2_MYCLE (Q49762) Chaperone protein dnaJ2
Length = 378
Score = 70.1 bits (170), Expect = 8e-13
Identities = 34/107 (31%), Positives = 60/107 (55%)
Query: 14 GESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISSKGIT 73
G +GDL + H++F R+G+DLH TV++ +V A +G T+ + + + +I T
Sbjct: 240 GPAGDLYVEVHEQAHDIFVRDGDDLHCTVSVPMVDAALGTTITVDAILDGMSEIDISPGT 299
Query: 74 NPKQVRKFKGEGMPLHTSTKKGDLYVTFEVLFPTTLSEEQKTKIKSI 120
P V + +G+GMP S +G+L+V EV+ PT L + ++ +
Sbjct: 300 QPGSVIELRGQGMPHLRSNTRGNLHVHVEVMVPTRLDQHDTELLREL 346
>DNJ2_MYCTU (P63966) Chaperone protein dnaJ2
Length = 382
Score = 68.9 bits (167), Expect = 2e-12
Identities = 36/99 (36%), Positives = 55/99 (55%)
Query: 14 GESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISSKGIT 73
G +GDL + H++F REG+ LH TV++ +V A +G T+ + + L +I+ T
Sbjct: 244 GPAGDLYVEVHEQAHDVFVREGDHLHCTVSVPMVDAALGVTVTVDAILDGLSEITIPPGT 303
Query: 74 NPKQVRKFKGEGMPLHTSTKKGDLYVTFEVLFPTTLSEE 112
P V +G GMP S +GDL+V EV+ PT L +
Sbjct: 304 QPGSVITLRGRGMPHLRSNTRGDLHVHVEVVVPTRLDHQ 342
>DNJ2_MYCBO (P63967) Chaperone protein dnaJ2
Length = 382
Score = 68.9 bits (167), Expect = 2e-12
Identities = 36/99 (36%), Positives = 55/99 (55%)
Query: 14 GESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISSKGIT 73
G +GDL + H++F REG+ LH TV++ +V A +G T+ + + L +I+ T
Sbjct: 244 GPAGDLYVEVHEQAHDVFVREGDHLHCTVSVPMVDAALGVTVTVDAILDGLSEITIPPGT 303
Query: 74 NPKQVRKFKGEGMPLHTSTKKGDLYVTFEVLFPTTLSEE 112
P V +G GMP S +GDL+V EV+ PT L +
Sbjct: 304 QPGSVITLRGRGMPHLRSNTRGDLHVHVEVVVPTRLDHQ 342
>DNJ2_ALLPO (P42824) DnaJ protein homolog 2
Length = 418
Score = 68.9 bits (167), Expect = 2e-12
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
++ F + + D +GD+ F ++ H FKR+G+DL +++L +AL GF+ + HL
Sbjct: 235 KITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHL 294
Query: 61 DEHLVDISSK--GITNPKQVRKFKGEGMPLHTST-KKGDLYVTFEVLFPTTLSEEQKTKI 117
D + I S + P Q + EGMP++ +G LY+ F V FP +L+ +Q +
Sbjct: 295 DNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKAL 354
Query: 118 KSIL 121
+S+L
Sbjct: 355 ESVL 358
>DJA4_MOUSE (Q9JMC3) DnaJ homolog subfamily A member 4 (MmDjA4)
Length = 397
Score = 68.9 bits (167), Expect = 2e-12
Identities = 41/126 (32%), Positives = 76/126 (59%), Gaps = 5/126 (3%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
++LF+ +G+ + + GD+ + H +F+R G DL + I L +AL GF+KTIK L
Sbjct: 222 KILFHGEGDQEPELDPGDVIIVLDQKDHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTL 281
Query: 61 DEHLVDISSKG--ITNPKQVRKFKGEGMPLHTS-TKKGDLYVTFEVLFPTT--LSEEQKT 115
D+ ++ ISSK + ++ + EGMP++ + +KG + + F V+FP LS+E+
Sbjct: 282 DDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFPEKQWLSQEKLP 341
Query: 116 KIKSIL 121
+++++L
Sbjct: 342 QLEALL 347
>TSR6_MOUSE (Q80Y75) Testis spermatocyte apoptosis-related gene 6
protein (Testis and spermatogenesis cell related protein
6)
Length = 316
Score = 68.6 bits (166), Expect = 2e-12
Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Query: 2 VLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHLD 61
+ F ++G+ + D+ F ++ H F+RE ++L I L +AL +K LD
Sbjct: 194 ITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLD 253
Query: 62 EHLVDISSKGITNPKQVRKFKGEGMPL-HTSTKKGDLYVTFEVLFPTTLSEEQKTKIKSI 120
+ L++I I +PK + GEGMPL +KKGDL++ F++ FPT L+ ++K ++
Sbjct: 254 DRLLNIPINDIVHPKYFKIVPGEGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQA 313
Query: 121 L 121
L
Sbjct: 314 L 314
>DJA4_HUMAN (Q8WW22) DnaJ homolog subfamily A member 4
Length = 397
Score = 68.6 bits (166), Expect = 2e-12
Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 1 EVLFYEDGEPIIDGESGDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHL 60
++LF+ +G+ + E GD+ + H +F+R G+DL + I L +AL GF+KTIK L
Sbjct: 222 KILFHGEGDQEPELEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTL 281
Query: 61 DEHLVDISSKG--ITNPKQVRKFKGEGMPLHTS-TKKGDLYVTFEVLFPTT--LSEEQKT 115
D ++ I+SK + +R + EGMP++ + +KG L + F V+FP LS E+
Sbjct: 282 DNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFPEKHWLSLEKLP 341
Query: 116 KIKSIL 121
+++++L
Sbjct: 342 QLEALL 347
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.138 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,363,074
Number of Sequences: 164201
Number of extensions: 556077
Number of successful extensions: 1648
Number of sequences better than 10.0: 152
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1362
Number of HSP's gapped (non-prelim): 214
length of query: 121
length of database: 59,974,054
effective HSP length: 97
effective length of query: 24
effective length of database: 44,046,557
effective search space: 1057117368
effective search space used: 1057117368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC145329.3