BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145222.8 + phase: 0
(209 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PSAD_CUCSA (P32869) Photosystem I reaction center subunit II, ch... 328 7e-90
PSAD_LYCES (P12372) Photosystem I reaction center subunit II, ch... 327 9e-90
PSAD_SPIOL (P12353) Photosystem I reaction center subunit II, ch... 317 1e-86
PSAD_NICSY (P29302) Photosystem I reaction center subunit II, ch... 315 4e-86
PSAD_HORVU (P36213) Photosystem I reaction center subunit II, ch... 295 5e-80
PSD2_ARATH (Q9SA56) Photosystem I reaction center subunit II-2, ... 293 2e-79
PSD1_ARATH (Q9S7H1) Photosystem I reaction center subunit II-1, ... 288 5e-78
PSAD_CHLRE (Q39615) Photosystem I reaction center subunit II, ch... 224 1e-58
PSAD_GUITH (O78502) Photosystem I reaction center subunit II (Ph... 189 3e-48
PSAD_PORPU (P51279) Photosystem I reaction center subunit II (Ph... 186 4e-47
PSAD_ODOSI (P49481) Photosystem I reaction center subunit II (Ph... 182 6e-46
PSAD_SYNY3 (P19569) Photosystem I reaction center subunit II (Ph... 181 1e-45
PSAD_MASLA (O07115) Photosystem I reaction center subunit II (Ph... 181 1e-45
PSAD_SKECO (O96800) Photosystem I reaction center subunit II (Ph... 178 7e-45
PSAD_CYACA (Q9TLR2) Photosystem I reaction center subunit II (Ph... 169 4e-42
PSAD_SYNEL (P20452) Photosystem I reaction center subunit II (Ph... 168 1e-41
PSAD_NOSS8 (P56596) Photosystem I reaction center subunit II (Ph... 162 4e-40
PSAD_ANASP (P58573) Photosystem I reaction center subunit II 159 3e-39
PSAD_FREDI (P23808) Photosystem I reaction center subunit II (Ph... 154 1e-37
PSAD_SYNP6 (P23076) Photosystem I reaction center subunit II (Ph... 121 1e-27
>PSAD_CUCSA (P32869) Photosystem I reaction center subunit II,
chloroplast precursor (Photosystem I 20 kDa subunit)
(PSI-D) (PS I subunit 5)
Length = 207
Score = 328 bits (840), Expect = 7e-90
Identities = 166/215 (77%), Positives = 177/215 (82%), Gaps = 14/215 (6%)
Query: 1 MAMATQASLFTPPLSSPK------PWKQPSTLSFISLKPIKFTTKTTKISAADEKTEAAS 54
MAMATQA+LFTP LS+PK PWKQ STLSF++ KP + AA
Sbjct: 1 MAMATQATLFTPSLSTPKSTGISIPWKQSSTLSFLTSKP--------HLKAASSSRSFKV 52
Query: 55 VTTKEEAPAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMP 114
E + AP GF+PPELDP+TPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMP
Sbjct: 53 SAEAETSVEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMP 112
Query: 115 TGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPE 174
TGGAAIMREGPNLLKLARKEQCLALG RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPE
Sbjct: 113 TGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPE 172
Query: 175 KVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQPFDV 209
KVNPGR+GVGQNFRSIGKNVSPIEVKFTGKQ +D+
Sbjct: 173 KVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 207
>PSAD_LYCES (P12372) Photosystem I reaction center subunit II,
chloroplast precursor (Photosystem I 20 kDa subunit)
(PSI-D)
Length = 208
Score = 327 bits (839), Expect = 9e-90
Identities = 171/214 (79%), Positives = 182/214 (84%), Gaps = 11/214 (5%)
Query: 1 MAMATQASLFTPPLSSPK----PWKQPSTLSFISLKPIKFTTKTTK-ISAADEKTEAASV 55
MAMATQASLFTPPLS PK PWKQ S +SF + K +K T T+ I A E+ AA+
Sbjct: 1 MAMATQASLFTPPLSVPKSTTAPWKQ-SLVSFSTPKQLKSTVSVTRPIRAMAEEAPAAT- 58
Query: 56 TTKEEAPAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPT 115
EE PA P GFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPT
Sbjct: 59 ---EEKPA-PAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPT 114
Query: 116 GGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEK 175
GGAAIMR+GPNLLKLARKEQCLALG RLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK
Sbjct: 115 GGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEK 174
Query: 176 VNPGRQGVGQNFRSIGKNVSPIEVKFTGKQPFDV 209
VNPGR+GVGQNFRSIGKN S IEVKFTGKQ +D+
Sbjct: 175 VNPGREGVGQNFRSIGKNKSAIEVKFTGKQVYDI 208
>PSAD_SPIOL (P12353) Photosystem I reaction center subunit II,
chloroplast precursor (Photosystem I 20 kDa subunit)
(PSI-D)
Length = 212
Score = 317 bits (813), Expect = 1e-86
Identities = 169/218 (77%), Positives = 181/218 (82%), Gaps = 15/218 (6%)
Query: 1 MAMATQASLFTPP-LSSPKP--------WKQPSTLSFISLKPIKFTTKTTKISAADEKTE 51
MAMATQA+LF+P LSS KP +KQPS ++F S KP + + +AA E
Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFAS-KPAS-RHHSIRAAAAAEGKA 58
Query: 52 AASVTTKEEAPAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIF 111
AA+ TKE AP GFTPPELDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIF
Sbjct: 59 AAATETKE----APKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIF 114
Query: 112 EMPTGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGV 171
EMPTGGAAIMREGPNLLKLARKEQCLALG RLRSKYKIKYQFYRVFP+GEVQYLHPKDGV
Sbjct: 115 EMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGV 174
Query: 172 YPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQPFDV 209
YPEKVNPGRQGVG N RSIGKNVSPIEVKFTGKQP+D+
Sbjct: 175 YPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
>PSAD_NICSY (P29302) Photosystem I reaction center subunit II,
chloroplast precursor (Photosystem I 20 kDa subunit)
(PSI-D)
Length = 204
Score = 315 bits (808), Expect = 4e-86
Identities = 166/212 (78%), Positives = 175/212 (82%), Gaps = 11/212 (5%)
Query: 1 MAMATQASLFTPPLSSPK---PWKQPSTLSFISLKPIKFTTKTTKISAADEKTEAASVTT 57
MAMATQASLFTP LS+PK PWKQ +L+ S K +K T + A A T
Sbjct: 1 MAMATQASLFTPALSAPKSSAPWKQ--SLASFSPKQLKSTVSAPRPIRA----MAEEAAT 54
Query: 58 KEEAPAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 117
KE APVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG
Sbjct: 55 KEAE--APVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGG 112
Query: 118 AAIMREGPNLLKLARKEQCLALGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN 177
AAIMREG NLLKLARKEQCLALG RLRSKYKI Y+FYRVFPNGEVQYLHPKDGVYPEKVN
Sbjct: 113 AAIMREGANLLKLARKEQCLALGTRLRSKYKINYRFYRVFPNGEVQYLHPKDGVYPEKVN 172
Query: 178 PGRQGVGQNFRSIGKNVSPIEVKFTGKQPFDV 209
GRQGVGQNFRSIGKN SPIEVKFTGKQ +D+
Sbjct: 173 AGRQGVGQNFRSIGKNKSPIEVKFTGKQVYDL 204
>PSAD_HORVU (P36213) Photosystem I reaction center subunit II,
chloroplast precursor (Photosystem I 20 kDa subunit)
(PSI-D)
Length = 205
Score = 295 bits (755), Expect = 5e-80
Identities = 157/213 (73%), Positives = 166/213 (77%), Gaps = 12/213 (5%)
Query: 1 MAMATQASLFTPPLS----SPKPWKQPSTLSFISLKPIKFTTKTTKISAADEKTEAASVT 56
MAMATQAS T L SP +P+TL+ S + AA T A +
Sbjct: 1 MAMATQASAATRHLITAAWSPSAKPRPATLAMPSS-----ARGPAPLFAAAPDTPAPAAP 55
Query: 57 TKEEAPAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG 116
E APA GF PP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTG
Sbjct: 56 PAEPAPA---GFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTG 112
Query: 117 GAAIMREGPNLLKLARKEQCLALGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKV 176
GAAIMREGPNLLKLARKEQCLALGNRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKV
Sbjct: 113 GAAIMREGPNLLKLARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKV 172
Query: 177 NPGRQGVGQNFRSIGKNVSPIEVKFTGKQPFDV 209
N GRQGVGQNFRSIGKNVSPIEVKFTGK FD+
Sbjct: 173 NAGRQGVGQNFRSIGKNVSPIEVKFTGKNSFDI 205
>PSD2_ARATH (Q9SA56) Photosystem I reaction center subunit II-2,
chloroplast precursor (Photosystem I 20 kDa subunit 2)
(PSI-D2)
Length = 204
Score = 293 bits (750), Expect = 2e-79
Identities = 150/208 (72%), Positives = 167/208 (80%), Gaps = 5/208 (2%)
Query: 3 MATQAS-LFTPPLSSPKPWKQPSTLSFISLKPIKFTTKTTKISAADEKTEAASVTTKEEA 61
MATQA+ +F+P +++ + L S +P + T I A ++ +A+ KE
Sbjct: 1 MATQAAGIFSPAITTTTSAVKKLHLFSSSHRPKSLSFTKTAIRAEKTESSSAAPAVKE-- 58
Query: 62 PAAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIM 121
APVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIM
Sbjct: 59 --APVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIM 116
Query: 122 REGPNLLKLARKEQCLALGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQ 181
REGPNLLKLARKEQCLALG RLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGR+
Sbjct: 117 REGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGRE 176
Query: 182 GVGQNFRSIGKNVSPIEVKFTGKQPFDV 209
GVG N RSIGKNVSPIEVKFTGKQ +D+
Sbjct: 177 GVGLNMRSIGKNVSPIEVKFTGKQSYDL 204
>PSD1_ARATH (Q9S7H1) Photosystem I reaction center subunit II-1,
chloroplast precursor (Photosystem I 20 kDa subunit 1)
(PSI-D1)
Length = 208
Score = 288 bits (738), Expect = 5e-78
Identities = 141/178 (79%), Positives = 149/178 (83%), Gaps = 3/178 (1%)
Query: 32 KPIKFTTKTTKISAADEKTEAASVTTKEEAPAAPVGFTPPELDPNTPSPIFGGSTGGLLR 91
K + FT + D AA+ +EAP VGFTPP+LDPNTPSPIF GSTGGLLR
Sbjct: 34 KSLSFTKTAIRAEKTDSSAAAAAAPATKEAP---VGFTPPQLDPNTPSPIFAGSTGGLLR 90
Query: 92 KAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIKY 151
KAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALG RLRSKYKI Y
Sbjct: 91 KAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITY 150
Query: 152 QFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQPFDV 209
QFYRVFPNGEVQYLHPKDGVYPEK NPGR+GVG N RSIGKNVSPIEVKFTGKQ +D+
Sbjct: 151 QFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSYDL 208
>PSAD_CHLRE (Q39615) Photosystem I reaction center subunit II,
chloroplast precursor (Photosystem I 20 kDa subunit)
(PSI-D)
Length = 196
Score = 224 bits (570), Expect = 1e-58
Identities = 110/177 (62%), Positives = 134/177 (75%), Gaps = 9/177 (5%)
Query: 37 TTKTTKISAADEKTEAASVTTKEEAPAAPVG---------FTPPELDPNTPSPIFGGSTG 87
T +++++ A +V + EA AAP +T P L+P+TPSPIFGGSTG
Sbjct: 13 TRASSRVAVAARPAARRAVVVRAEAEAAPAAAKKAAEKPAWTVPTLNPDTPSPIFGGSTG 72
Query: 88 GLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGNRLRSKY 147
GLLRKAQ EEFYVITWE+ KEQIFEMPTGGAAIMR+GPNLLK +KEQCLAL +LR+K+
Sbjct: 73 GLLRKAQTEEFYVITWEAKKEQIFEMPTGGAAIMRQGPNLLKFGKKEQCLALTTQLRNKF 132
Query: 148 KIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGK 204
K+ FYRVFP+G+VQYLHP DGVYPEKVN GR G QN R IG+NV+PI+VKF+G+
Sbjct: 133 KLTPCFYRVFPDGKVQYLHPADGVYPEKVNAGRVGANQNMRRIGQNVNPIKVKFSGR 189
>PSAD_GUITH (O78502) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D)
Length = 141
Score = 189 bits (481), Expect = 3e-48
Identities = 91/133 (68%), Positives = 108/133 (80%), Gaps = 1/133 (0%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 132
L+ PSP F GSTGG LR A+ EE Y ITW SPKEQ+FEMPTGGAAIMR+G NLL LAR
Sbjct: 5 LNLQIPSPTFEGSTGGWLRAAETEEKYAITWTSPKEQVFEMPTGGAAIMRKGENLLYLAR 64
Query: 133 KEQCLALGNRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIG 191
KEQCLALG ++++ +KI Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR GVG SIG
Sbjct: 65 KEQCLALGTQVKTSFKITDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRIGVGNVSHSIG 124
Query: 192 KNVSPIEVKFTGK 204
KN++P ++KFT K
Sbjct: 125 KNLNPAQIKFTNK 137
>PSAD_PORPU (P51279) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D)
Length = 141
Score = 186 bits (471), Expect = 4e-47
Identities = 91/140 (65%), Positives = 104/140 (74%), Gaps = 1/140 (0%)
Query: 70 PPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLK 129
P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR+G NLL
Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLY 61
Query: 130 LARKEQCLALGNRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFR 188
LA+KEQCLALG +L+ K+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR +
Sbjct: 62 LAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRASINSVDH 121
Query: 189 SIGKNVSPIEVKFTGKQPFD 208
SIGKNV+PI VKFT K +D
Sbjct: 122 SIGKNVNPINVKFTNKATYD 141
>PSAD_ODOSI (P49481) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D)
Length = 139
Score = 182 bits (461), Expect = 6e-46
Identities = 90/131 (68%), Positives = 101/131 (76%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 132
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LAR
Sbjct: 3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSKKEQIFEMPTGGAAIMRNGENLLYLAR 62
Query: 133 KEQCLALGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGK 192
KEQCLALG +LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGK 122
Query: 193 NVSPIEVKFTG 203
N +P +KF+G
Sbjct: 123 NPNPASIKFSG 133
>PSAD_SYNY3 (P19569) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D)
Length = 140
Score = 181 bits (459), Expect = 1e-45
Identities = 88/133 (66%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 139
P FGGSTGGLL KA EE Y ITW S EQ+FEMPTGGAAIM EG NLL LARKEQCLAL
Sbjct: 8 PKFGGSTGGLLSKANREEKYAITWTSASEQVFEMPTGGAAIMNEGENLLYLARKEQCLAL 67
Query: 140 GNRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSP 196
G +LR+K+K K Y+ YRV+P+GEVQYLHP DGV+PEKVN GR+ G R IG+N P
Sbjct: 68 GTQLRTKFKPKIQDYKIYRVYPSGEVQYLHPADGVFPEKVNEGREAQGTKTRRIGQNPEP 127
Query: 197 IEVKFTGKQPFDV 209
+ +KF+GK P++V
Sbjct: 128 VTIKFSGKAPYEV 140
>PSAD_MASLA (O07115) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D)
Length = 142
Score = 181 bits (459), Expect = 1e-45
Identities = 85/130 (65%), Positives = 103/130 (78%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 138
+PIFGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA MR+G NLL LARKEQC+A
Sbjct: 9 TPIFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAAKMRQGQNLLYLARKEQCIA 68
Query: 139 LGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIE 198
LG++LR Y+ YR++PNGE Y+HP DGV+PEKVNPGRQ V N R IG+N P +
Sbjct: 69 LGSQLRRLKITDYKIYRIYPNGETAYIHPADGVFPEKVNPGRQKVRYNDRRIGQNPDPAK 128
Query: 199 VKFTGKQPFD 208
+KF+G +D
Sbjct: 129 LKFSGVATYD 138
>PSAD_SKECO (O96800) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D)
Length = 139
Score = 178 bits (452), Expect = 7e-45
Identities = 88/131 (67%), Positives = 100/131 (76%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 132
L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGG+AIMR G NLL LAR
Sbjct: 3 LNLKTPFPTFGGSTGGWLRAAEVEEKYAITWTSAKEQIFEMPTGGSAIMRNGENLLYLAR 62
Query: 133 KEQCLALGNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGK 192
KEQCLAL +LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGK
Sbjct: 63 KEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGK 122
Query: 193 NVSPIEVKFTG 203
N +P +KF+G
Sbjct: 123 NPNPASIKFSG 133
>PSAD_CYACA (Q9TLR2) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D)
Length = 140
Score = 169 bits (428), Expect = 4e-42
Identities = 82/136 (60%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
Query: 73 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 132
L+ PSP F G+TGG LR + +EE Y ITW S E IFE+PTGG A M+ G NLL LA+
Sbjct: 5 LNLKMPSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLLYLAK 64
Query: 133 KEQCLALGNRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIG 191
KEQCLALGN+L+ K+KI ++ YR+FPNGE Q+LHPKDGV+PEKVN GR+ +G+ +IG
Sbjct: 65 KEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKIDHNIG 124
Query: 192 KNVSPIEVKFTGKQPF 207
KN++P EVKFT K F
Sbjct: 125 KNLNPAEVKFTHKTIF 140
>PSAD_SYNEL (P20452) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D)
Length = 138
Score = 168 bits (425), Expect = 1e-41
Identities = 80/130 (61%), Positives = 99/130 (75%), Gaps = 1/130 (0%)
Query: 80 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLAL 139
P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MREG NL+ ARKEQCLAL
Sbjct: 8 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLAL 67
Query: 140 -GNRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIE 198
+LR + Y+ YR+FP+GE +HPKDGV+PEKVN GR+ V RSIG+N +P +
Sbjct: 68 AAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQ 127
Query: 199 VKFTGKQPFD 208
+KFTGK+P+D
Sbjct: 128 LKFTGKKPYD 137
>PSAD_NOSS8 (P56596) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D)
Length = 138
Score = 162 bits (411), Expect = 4e-40
Identities = 81/131 (61%), Positives = 100/131 (75%), Gaps = 2/131 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 138
+P+F GSTGGLL KA VEE Y ITW SPK Q+FE+PTGGAA M +G NLL LARKEQ +A
Sbjct: 8 TPLFAGSTGGLLTKANVEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEQGIA 67
Query: 139 LGNRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPI 197
LG +LR K+KI Y+ YR+FPNGE ++HP DGV+PEKVN GR+ V R IG+N SP
Sbjct: 68 LGGQLR-KFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGREKVRFVPRRIGQNPSPA 126
Query: 198 EVKFTGKQPFD 208
++KF+GK +D
Sbjct: 127 QLKFSGKYTYD 137
>PSAD_ANASP (P58573) Photosystem I reaction center subunit II
Length = 139
Score = 159 bits (403), Expect = 3e-39
Identities = 79/131 (60%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 138
+P+F GSTGGLL KA EE Y ITW SPK Q+FE+PTGGAA M EG NLL +ARKE +A
Sbjct: 9 TPLFAGSTGGLLTKAVEEEKYAITWTSPKAQVFELPTGGAATMHEGENLLYIARKEYGIA 68
Query: 139 LGNRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVN GR+ V N RSIG+N +P
Sbjct: 69 LGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNAGREKVRFNARSIGENPNPS 127
Query: 198 EVKFTGKQPFD 208
+VKF+GK +D
Sbjct: 128 QVKFSGKATYD 138
>PSAD_FREDI (P23808) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D)
Length = 138
Score = 154 bits (390), Expect = 1e-37
Identities = 77/131 (58%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 138
+P+F GSTGGLL+KA+VEE Y ITW SPK Q+FE+PTGGAA M++G NLL LARKE +A
Sbjct: 8 TPLFAGSTGGLLKKAEVEEKYAITWTSPKAQVFELPTGGAATMQQGQNLLYLARKEYGIA 67
Query: 139 LGNRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPI 197
LG +LR K+KI Y+ YR+ P GE +HP DGV+PEKVN GR+ V R IG+N +P
Sbjct: 68 LGGQLR-KFKITDYKIYRILPGGETTLIHPADGVFPEKVNAGREKVRFVPRRIGENPNPS 126
Query: 198 EVKFTGKQPFD 208
+KF+GK +D
Sbjct: 127 AIKFSGKYTYD 137
>PSAD_SYNP6 (P23076) Photosystem I reaction center subunit II
(Photosystem I 16 kDa polypeptide) (PSI-D) (Fragment)
Length = 98
Score = 121 bits (304), Expect = 1e-27
Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 3/90 (3%)
Query: 79 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLA 138
+P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M EG NLL ARKEQ LA
Sbjct: 8 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALA 67
Query: 139 LGNRLRSKYKIK---YQFYRVFPNGEVQYL 165
LG +LR+K+K K Y+ Y VFP G+V+YL
Sbjct: 68 LGTQLRTKFKPKIESYKIYDVFPGGDVEYL 97
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,408,389
Number of Sequences: 164201
Number of extensions: 1255108
Number of successful extensions: 2690
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2597
Number of HSP's gapped (non-prelim): 97
length of query: 209
length of database: 59,974,054
effective HSP length: 105
effective length of query: 104
effective length of database: 42,732,949
effective search space: 4444226696
effective search space used: 4444226696
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Medicago: description of AC145222.8