BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145202.1 - phase: 0
(383 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP14_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 k... 51 4e-06
NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neur... 50 1e-05
NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neur... 47 6e-05
UN89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoo... 45 3e-04
NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neur... 45 3e-04
CYP8_CAEEL (P52016) Peptidyl-prolyl cis-trans isomerase 8 (EC 5.... 45 4e-04
SRPR_HUMAN (P08240) Signal recognition particle receptor alpha s... 44 7e-04
IF2_STRMU (Q8DVP9) Translation initiation factor IF-2 44 9e-04
TRDN_HUMAN (Q13061) Triadin 43 0.001
MAPB_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [... 43 0.002
FUTS_DROME (Q9W596) Microtubule-associated protein futsch 43 0.002
MAPB_RAT (P15205) Microtubule-associated protein 1B (MAP 1B) (Ne... 42 0.003
SFRC_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12 (Seri... 42 0.003
MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC ... 42 0.003
MAPB_MOUSE (P14873) Microtubule-associated protein 1B (MAP 1B) (... 42 0.003
CDT1_SCHPO (P40382) Cell division cycle protein cdt1 42 0.003
SFRC_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12 (Se... 41 0.004
MINT_HUMAN (Q96T58) Msx2-interacting protein (SMART/HDAC1 associ... 41 0.006
ANRY_HUMAN (Q6UB99) Ankyrin repeat domain protein 11 (Ankyrin re... 41 0.006
U2R2_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliary... 40 0.008
>NP14_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa
protein) (140 kDa nucleolar phosphoprotein) (Nopp140)
(Nucleolar and coiled-body phosphoprotein 1)
Length = 704
Score = 51.2 bits (121), Expect = 4e-06
Identities = 60/284 (21%), Positives = 122/284 (42%), Gaps = 16/284 (5%)
Query: 48 ETTEHHSSEESTKEYEVKECTTE-VSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKT 106
ET+ SSE+S++E + + T+ + A S + + + E + +SS+ +
Sbjct: 81 ETSSSDSSEDSSEEEDKAQVPTQKAAAPAKRASLPQHAGKAAAKASESSSSEESSEEEEE 140
Query: 107 RGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQ 166
+ K K P+ ++ + + + ++ + K ++ +
Sbjct: 141 KDKKKKPVQQKAVKPQAKAVRPPPKKAESSESESDSSSEDEAPQTQKPKAAATAAKAPTK 200
Query: 167 NQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQR 226
Q K P P P K K + + S S +S +++S S + + A+AP ++
Sbjct: 201 AQTKAPAKPGPPAKAQPKAANGKAGSSSSSSSSSSSDDSEEEKK--AAAP----LKKTAP 254
Query: 227 RKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKV 286
+K+ +K K A +K+ + S E+EE + ++ +K KA P Y PPP V
Sbjct: 255 KKQVVAKAPVKVTAAPTQKSSSSEDSSSEEEE---EQKKPMKKKAGP----YSSVPPPSV 307
Query: 287 DLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGAAAQRKHRT 330
L K A+SPK ++ A S++ +E ++++ + +T
Sbjct: 308 SLSK-KSVGAQSPKKAAAQTQP-ADSSADSSEESDSSSEEEKKT 349
Score = 40.8 bits (94), Expect = 0.006
Identities = 77/335 (22%), Positives = 122/335 (35%), Gaps = 32/335 (9%)
Query: 49 TTEHHSSEESTKEYEV-------KECTTEVSVKAPDVSNIRKSEEKLTPDFEGVL----- 96
T + SSE+S+ E E K+ SV P VS +KS +P
Sbjct: 271 TQKSSSSEDSSSEEEEEQKKPMKKKAGPYSSVPPPSVSLSKKSVGAQSPKKAAAQTQPAD 330
Query: 97 -NAKSSKPHKTRGNHKPRDTVK------PTVPRPFSLATERRATILTRPTFEEDN--KGG 147
+A SS+ + + + K P P P E + + E++ K
Sbjct: 331 SSADSSEESDSSSEEEKKTPAKTVVSKTPAKPAPVKKKAESSSDSSDSDSSEDEAPAKPV 390
Query: 148 HGRKSVNKKNVLSSNTLKQNQLKTPLVPR-KPLKPDNKK----HSDEDDSCSVASGTATS 202
KS K ++ + TP P KP ++K S+E+ S S T S
Sbjct: 391 SATKSPLSKPAVTPKPPAAKAVATPKQPAGSGQKPQSRKADSSSSEEESSSSEEEATKKS 450
Query: 203 VKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQ 262
V + K+R T +APS ++A R S E + E +K + +K++ A
Sbjct: 451 VTTPKARVTAKAAPSL-PAKQAPRAGGDSSSDSESSSSEEEKKTPPKPPAKKKAAGAAVP 509
Query: 263 LRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGA 322
+K A+ S + KK P ++A +PK K+N G S G K
Sbjct: 510 KPTPVKKAAAESSSSSSSSEDSSEEEKKKPKSKA-TPKPQAGKAN-GVPASQNG---KAG 564
Query: 323 AAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENE 357
+ N + GSG ++T +E
Sbjct: 565 KESEEEEEDTEQNKKAAGTKPGSGKKRKHNETADE 599
>NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa
neurofilament protein) (Neurofilament medium
polypeptide) (NF-M) (Neurofilament 3)
Length = 915
Score = 49.7 bits (117), Expect = 1e-05
Identities = 90/370 (24%), Positives = 141/370 (37%), Gaps = 59/370 (15%)
Query: 22 DGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNI 81
+G D E G++ +E E E E + E +E E KE E V+
Sbjct: 540 EGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEG-EEAEAKE---EKKVE------- 588
Query: 82 RKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFE 141
KSEE T + E V +AK KP K + P P S E+ + + + E
Sbjct: 589 EKSEEVATKE-ELVADAKVEKPEKAKS------------PVPKSPVEEKGKSPVPKSPVE 635
Query: 142 EDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTAT 201
E K + V +K K K+P V K P +K +E V +
Sbjct: 636 EKGKSPVPKSPVEEKG-------KSPVPKSP-VEEKGKSPVSKSPVEEKAKSPVPK---S 684
Query: 202 SVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAME--AEKNQNEARSKEEKEEA 259
V+ KS+A V E+ + K+E+K++ + EK + E+ KEE
Sbjct: 685 PVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAE 744
Query: 260 IKQLRRSLKFKASPMPSFYHEGPPPKVDLKK--------LPPTRAKSPKLGRRKSN---S 308
+ + +S+K EG P + + +K + G RK + +
Sbjct: 745 VVTITKSVKVHLEKETK--EEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVN 802
Query: 309 GAVYSSEGV----KEKGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENETEHTKLI 364
G V E V KEKG + + + + TN +LS G D K+E + TK +
Sbjct: 803 GEVEGKEEVEQETKEKG-SGREEEKGVVTNGLDLSPADEKKGGD----KSEEKVVVTKTV 857
Query: 365 EEINMIKANG 374
E+I +G
Sbjct: 858 EKITSEGGDG 867
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa
neurofilament protein) (Neurofilament medium
polypeptide) (NF-M) (Fragment)
Length = 810
Score = 47.4 bits (111), Expect = 6e-05
Identities = 64/311 (20%), Positives = 115/311 (36%), Gaps = 51/311 (16%)
Query: 22 DGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNI 81
+ D E G++ +E E +E E E + E + +A + +
Sbjct: 427 EAAKSDQAEEGGSEKEGSSEKEE---------GEQEEEGETEAEGEGEEAAAEAKEEKKM 477
Query: 82 RKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVK-PTVPRPFSLATERRATILTRPTF 140
+ E++ P E AK KP K + T K PT P + + E ++ PT
Sbjct: 478 EEKAEEVAPKEELAAEAKVEKPEKAKSPVAKSPTTKSPTAKSPEAKSPEAKSPTAKSPTA 537
Query: 141 EEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTA 200
K V S T K + K+P K K + +
Sbjct: 538 --------------KSPVAKSPTAKSPEAKSP-----EAKSPTAKSPTAKSPAAKSPAPK 578
Query: 201 TSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAI 260
+ V+ K +A + E+ +++++ EEK++A E+ K + +A KEEK + +
Sbjct: 579 SPVEEVKPKAEAGA-------EKGEQKEKVE---EEKKEAKESPKEE-KAEKKEEKPKDV 627
Query: 261 KQLRRSLKFKASPMPSFYHEGP----PPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEG 316
+ +++ SP+ + E P P +K P AK + + K G
Sbjct: 628 PEKKKA----ESPVKA---ESPVKEEVPAKPVKVSPEKEAKEEEKPQEKEKEKEKVEEVG 680
Query: 317 VKEKGAAAQRK 327
KE+G + +
Sbjct: 681 GKEEGGLKESR 691
>UN89_CAEEL (O01761) Muscle M-line assembly protein unc-89
(Uncoordinated protein 89)
Length = 6632
Score = 45.1 bits (105), Expect = 3e-04
Identities = 65/312 (20%), Positives = 107/312 (33%), Gaps = 39/312 (12%)
Query: 34 TDNHNMTESYEHINETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFE 93
T+ E +++T E T + V E+ + D RK ++ +PD
Sbjct: 1325 TEGSISVSKIEVVSKTDSQTDVREGTPKRRVSFAEEELPKEVIDSD--RKKKKSPSPD-- 1380
Query: 94 GVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSV 153
K P KT KP K T S + A+ PT +E + KS
Sbjct: 1381 ----KKEKSPEKTE--EKPASPTKKTGEEVKSPKEKSPAS----PTKKEKSPAAEEVKSP 1430
Query: 154 NKKNVLSSNTLKQ------------NQLKTPLVPRKPLKPDNKKHSDEDDSCSVA---SG 198
KK S+ K+ +++K P+ P K + ED V S
Sbjct: 1431 TKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKSPVKKEKSP 1490
Query: 199 TATSVKSFKSRATVASAPSFRSTERAQRRKEFYS---------KLEEKQQAMEAEKNQNE 249
AT++ S T+ + +TE +E + K++EK ++ + E
Sbjct: 1491 DATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKTPEKVDEKPKSPTKKDKSPE 1550
Query: 250 ARSKEEKEEAIKQLRRSLKFKASPM-PSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNS 308
EE + +K+ + K + P P+ + P K KSP +
Sbjct: 1551 KSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEK 1610
Query: 309 GAVYSSEGVKEK 320
V + KEK
Sbjct: 1611 SVVEELKSPKEK 1622
Score = 44.3 bits (103), Expect = 5e-04
Identities = 68/323 (21%), Positives = 123/323 (38%), Gaps = 36/323 (11%)
Query: 22 DGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNI 81
D + + S ++ T E E + + S ++T EV TT I
Sbjct: 1456 DEVKEKSPPKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETT-----------I 1504
Query: 82 RKSEEKLTPDF--EGVLNAKSSKPHKT--RGNHKPRDTVKPTVPRPFSLATERRATILTR 137
K+E +T + E + S K KT + + KP+ K S+ E ++ +
Sbjct: 1505 EKTETTMTTEMTHESEESRTSVKKEKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKE 1564
Query: 138 PTFE--EDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKP--------LKPDNKKHS 187
+ E E+ +K + + S +N++K+P K LK +K
Sbjct: 1565 KSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSP 1624
Query: 188 DEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQ 247
++ D S T KS +P+ + E++ + E K+++ +K
Sbjct: 1625 EKADD-KPKSPTKKEKSPEKSATEDVKSPTKK--EKSPEKVEEKPTSPTKKESSPTKKTD 1681
Query: 248 NEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSN 307
+E +S +KE++ + + ASP E P K ++++ + KSP+ K
Sbjct: 1682 DEVKSPTKKEKSPQTVEEK---PASPTKK---EKSPEKSVVEEVKSPKEKSPEKAEEKPK 1735
Query: 308 SGAVYSSEGVKEKGAAAQRKHRT 330
S E EK AA + K T
Sbjct: 1736 SPT--KKEKSPEKSAAEEVKSPT 1756
Score = 35.4 bits (80), Expect = 0.24
Identities = 58/297 (19%), Positives = 99/297 (32%), Gaps = 18/297 (6%)
Query: 12 KEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTKEYEVKECTTE- 70
K P++ VV ++ E D E E + + TK+ + E E
Sbjct: 1606 KSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEK 1665
Query: 71 -VSVKAPDVSNIRKSEEKL---TPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSL 126
S + S +K+++++ T + + T+ P +V V P
Sbjct: 1666 PTSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEK 1725
Query: 127 ATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKH 186
+ E+ PT +E + + V + K + K P+ P K ++
Sbjct: 1726 SPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEK----PKSPTKKESSPV 1781
Query: 187 SDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKN 246
DD + K KS V P+ + + K S EE + + EK+
Sbjct: 1782 KMADDEVK------SPTKKEKSPEKVEEKPASPTKKEKTPEK---SAAEELKSPTKKEKS 1832
Query: 247 QNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGR 303
+ K E K + + SP P G P K K + +PKL R
Sbjct: 1833 PSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEKPPAPKLTR 1889
>NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa
neurofilament protein) (Neurofilament heavy polypeptide)
(NF-H)
Length = 1026
Score = 45.1 bits (105), Expect = 3e-04
Identities = 66/303 (21%), Positives = 107/303 (34%), Gaps = 29/303 (9%)
Query: 51 EHHSSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKS--SKPHKTRG 108
E S E K +E T K+P + E+ +P+ L+ KS +K
Sbjct: 720 EEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEE 779
Query: 109 NHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQ 168
P D P + E ++ + +ED K K + KK + S ++ +
Sbjct: 780 ARSPADKFPEKAKSP--VKEEVKSPEKAKSPLKEDAKAPE--KEIPKKEEVKSPVKEEEK 835
Query: 169 LKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQR-- 226
+ V P K E++ T S K A AP + E+ +
Sbjct: 836 PQEVKVKEPPKKA-------EEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAV 888
Query: 227 RKEFYSKLEEKQQAMEAEKN----QNEARSK---------EEKEEAIKQLRRSLKFKASP 273
K SK+E K++ E +K + EA +K +EK E K+ K K
Sbjct: 889 EKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPS 948
Query: 274 MPSFYHEGPPPKVDLKKLPPTR-AKSPKLGRRKSNSGAVYSSEGVKEKGAAAQRKHRTSN 332
P+ E P K D K+ + + PK + S E K K A++ T
Sbjct: 949 KPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQ 1008
Query: 333 TNN 335
++
Sbjct: 1009 KDS 1011
Score = 38.9 bits (89), Expect = 0.022
Identities = 49/254 (19%), Positives = 92/254 (35%), Gaps = 15/254 (5%)
Query: 51 EHHSSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPD-FEGVLNAKSSKPHKTRGN 109
E S K +E + VK+P+ + EE +P+ + AKS + + +
Sbjct: 610 EEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSP 669
Query: 110 HKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLK---Q 166
K + VK P + +A + K KS K+ S K +
Sbjct: 670 EKAKSPVKAEAKSPEKAKSPVKA----------EAKSPEKAKSPVKEEAKSPEKAKSPVK 719
Query: 167 NQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQR 226
+ K+P + P+K + K + + KS + T+ T +
Sbjct: 720 EEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEE 779
Query: 227 RKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKV 286
+ K EK ++ E+ ++ ++K +E K + + K E P +V
Sbjct: 780 ARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEV 839
Query: 287 DLKKLPPTRAKSPK 300
+K+ PP +A+ K
Sbjct: 840 KVKE-PPKKAEEEK 852
Score = 36.6 bits (83), Expect = 0.11
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 8/164 (4%)
Query: 141 EEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTA 200
EE+ +GG + K + + K+P V + P K +++++ S A +
Sbjct: 491 EEEAEGG---EEETKSPPAEEAASPEKEAKSP-VKEEAKSPAEAKSPEKEEAKSPAEVKS 546
Query: 201 TSVKSFKSRATVASAPSFRSTERAQRRK--EFYSKLEEKQQAMEAEKNQNEARSKEEKEE 258
++ S P +S E+ + + E S + K A E K+ EA+S E+ +
Sbjct: 547 PEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKS 606
Query: 259 AIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTR--AKSPK 300
+K+ +S SP+ K K PT+ AKSP+
Sbjct: 607 PVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPE 650
>CYP8_CAEEL (P52016) Peptidyl-prolyl cis-trans isomerase 8 (EC
5.2.1.8) (PPIase) (Rotamase) (Cyclophilin-8)
Length = 466
Score = 44.7 bits (104), Expect = 4e-04
Identities = 46/211 (21%), Positives = 93/211 (43%), Gaps = 28/211 (13%)
Query: 141 EEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTA 200
E D++ G + ++++ N K+ Q+K+P N H+ D V
Sbjct: 277 ERDDRSGRDERRDDRRSSAPVNVKKKTQMKSP----------NFVHAPTKDGIKVRGRGK 326
Query: 201 TSVKSFKSRATVASAPSFRSTERAQRRKEFYSK----LEEKQ-QAMEAEKNQNEARSKEE 255
+ ++R+T + P ++ E + E + K LEE+Q +A + EK + E ++ E
Sbjct: 327 LTFLGGRTRST--TPPHWKREESKKLTLEAHQKRQEELEERQKRAAQREKEEAERNARLE 384
Query: 256 KEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSE 315
KE +Q +R L+ + + +LK+ + RR S SG+
Sbjct: 385 KERVERQNQRELE----------RQKQEAERELKRQQENEESGNRRRRRSSRSGSENDES 434
Query: 316 GVKE-KGAAAQRKHRTSNTNNCNLSDVTNGS 345
++E K +A + R+S++++ + S ++ S
Sbjct: 435 ELEEPKNRSASPRKRSSSSSSSSSSGHSSDS 465
>SRPR_HUMAN (P08240) Signal recognition particle receptor alpha
subunit (SR-alpha) (Docking protein alpha) (DP-alpha)
Length = 638
Score = 43.9 bits (102), Expect = 7e-04
Identities = 43/160 (26%), Positives = 64/160 (39%), Gaps = 24/160 (15%)
Query: 233 KLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKAS--------PMP---SFYHEG 281
K E+ ++A + ++ E R ++ KE+A ++ K + S P+P S G
Sbjct: 138 KFEDSEKAKKPVRSMIETRGEKPKEKAKNSKKKGAKKEGSDGPLATSKPVPAEKSGLPVG 197
Query: 282 PPPKVDLKKLPPTRAKSP----KLGRRKSNSGAVYSSEGVKEKGAAAQRKHRTSNTNNCN 337
P V+L K R K K GR S S+ KEKG A R N
Sbjct: 198 PENGVELSKEELIRRKREEFIQKHGRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKE 257
Query: 338 LSDVTNGSGLDGLMSKTENETEHTKLIEEINMIKANGQAG 377
+ D + + T N T L E+IN+I+ G G
Sbjct: 258 VLDYS---------TPTTNGTPEAALSEDINLIRGTGSGG 288
>IF2_STRMU (Q8DVP9) Translation initiation factor IF-2
Length = 916
Score = 43.5 bits (101), Expect = 9e-04
Identities = 71/327 (21%), Positives = 115/327 (34%), Gaps = 29/327 (8%)
Query: 31 ETGTDNHNMTESYEHIN-ETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLT 89
E G ++ + E + + E H SS E + + E T VSV+ V+ K E++
Sbjct: 12 EIGKESKEIVEKAKSLGLEVKSHASSVEESDAKRIVESFT-VSVEPKAVTPTSKVEKEAK 70
Query: 90 PDFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILT--RPTFEEDNKGG 147
V + K G +P++ R F E RA R E
Sbjct: 71 AQEGSVAAEPKAAATKPAGRPRPQN-------RNFKAEREARAKAEAERRQNNGERRNQN 123
Query: 148 HGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFK 207
G+ + K N + ++N + + + DN+ H S + T FK
Sbjct: 124 KGQNNRQKDNRNHGSQDRRNDNRNNRNRQNDNRRDNRNHFQNRQEASKSQPTGPRF-DFK 182
Query: 208 SRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSL 267
+RA A R Q F+ E K+QA +A++ +A+ +KE+ + +
Sbjct: 183 ARAAALKAEQNAEYSR-QSETRFHEAQEAKRQAAQAKE---KAKKLNQKEQPTVEAAATA 238
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTR-----------AKSPKLGRRKSNSGAVYSSEG 316
+A P + P VD ++ R PK + K N
Sbjct: 239 APQAQPQ-TVEQVTHPAAVDTRRKKQARPDKSRDFSHENEDGPKQNKHKKNRNKQNQVRN 297
Query: 317 VKEKGAAAQRKHRTSNTN-NCNLSDVT 342
K + K +N N N NL VT
Sbjct: 298 QKNSNWNKKNKKSKNNRNHNANLKPVT 324
>TRDN_HUMAN (Q13061) Triadin
Length = 728
Score = 43.1 bits (100), Expect = 0.001
Identities = 62/280 (22%), Positives = 101/280 (35%), Gaps = 31/280 (11%)
Query: 55 SEESTKEYEVKECTTEVSVKAPDV--SNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKP 112
S E ++ + E T + + P + I K + + E + K + K +G K
Sbjct: 114 SSEDEEDDDGDEDTDKGEIDEPPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGKEKV 173
Query: 113 RDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNK--KNVLSSNT--LKQNQ 168
R+ KP E++ T+ +E K KS K K V +KQ
Sbjct: 174 REKEKPEKKATHKEKIEKKEKPETKTVAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTA 233
Query: 169 LKTPLVPRKPLKPDNK---------KHSDEDDSCSVASGTATSVKSFKSRATVASAPSFR 219
K V + P KP K KH +D V + P
Sbjct: 234 AKVKEVQKTPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPAIPPPL 293
Query: 220 STERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYH 279
TE+A R LEEK+ + + + + +K++++E IK ++S K A
Sbjct: 294 PTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIK--KKSEKETA-------- 343
Query: 280 EGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKE 319
+D++K P +A K G K + A + KE
Sbjct: 344 ------IDVEKKEPGKASETKQGTVKIAAQAAAKKDEKKE 377
Score = 34.7 bits (78), Expect = 0.42
Identities = 49/223 (21%), Positives = 86/223 (37%), Gaps = 26/223 (11%)
Query: 56 EESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDT 115
EE T + +E E S K S+I K +E + E V + K +T+ + K
Sbjct: 446 EEKTTKTVEQEIRKEKSGKT---SSILKDKEPIKGKEEKVPASLKEKEPETKKDEKMSKA 502
Query: 116 VKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRK-SVNKKNVLS-----------SNT 163
K P+P L ++ P +++ K K ++K++++
Sbjct: 503 GKEVKPKPPQLQGKKEEK--PEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHGKPEEKV 560
Query: 164 LKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVAS--------GTATSVKSFKSRATVASA 215
LKQ + T KP KP K E + S+ + GT+ +S K + ++
Sbjct: 561 LKQVKAVTIEKTAKP-KPTKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEK 619
Query: 216 PSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEE 258
S + R+E S +E Q K + AR ++ E+
Sbjct: 620 ESKEKADMKHLREEKVSTRKESLQLHNVTKAEKPARVSKDVED 662
>MAPB_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B)
[Contains: MAP1 light chain LC1]
Length = 2468
Score = 42.7 bits (99), Expect = 0.002
Identities = 52/227 (22%), Positives = 83/227 (35%), Gaps = 23/227 (10%)
Query: 91 DFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGR 150
D G + K K + R+++KP +P + R+ + P + N
Sbjct: 520 DLTGQVPTPVVKQTKLKQRADSRESLKPAA-KPLPSKSVRKESKEETPEVTKVNHVEKPP 578
Query: 151 KSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRA 210
K +K+ V+ K +KT P K K VA AT VK ++
Sbjct: 579 KVESKEKVMVK---KDKPVKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKE 635
Query: 211 TVASA-----PSFRSTERAQRRKEFYSK-------LEEKQQAMEAEKNQNEARSKEEKEE 258
P + E+ + +KE K EEK + E +K + KEEK+E
Sbjct: 636 KTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKE 695
Query: 259 AIKQLRRSL-------KFKASPMPSFYHEGPPPKVDLKKLPPTRAKS 298
K++++ + K E PK ++KKLP KS
Sbjct: 696 PKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKS 742
Score = 37.7 bits (86), Expect = 0.049
Identities = 65/326 (19%), Positives = 115/326 (34%), Gaps = 39/326 (11%)
Query: 54 SSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPR 113
S + + K K E + P+V+ + E+ + + + K KP KT
Sbjct: 544 SLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVKKDKPVKTE------ 597
Query: 114 DTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPL 173
KP+V TE+ P+ + V K K+ +
Sbjct: 598 --TKPSV-------TEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETK----- 643
Query: 174 VPRKPLKPDNKKHSDEDDSCSVA-----SGTATSVKSFKSRATVASAPSFRSTERAQRRK 228
+KP++KK E VA + K K + E+ + +K
Sbjct: 644 -----VKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKK 698
Query: 229 EFYSKLEEKQQAMEAEKNQNEARSKEEKE--EAIKQLRRSLKFKASPMPSFYHEGP-PPK 285
E + K+ E +K + + KEEKE + IK+L + K ++P+ PK
Sbjct: 699 EVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPK 758
Query: 286 VDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGAAAQRKHRTSNTNNCNLSDVTNGS 345
V KK + S G+ K + +K++G AA+ T + V +
Sbjct: 759 VP-KKEESVKKDSVAAGKPKEKG----KIKVIKKEGKAAEAVAAAVGT-GATTAAVMAAA 812
Query: 346 GLDGLMSKTENETEHTKLIEEINMIK 371
G+ + E E E + + ++ K
Sbjct: 813 GIAAIGPAKELEAERSLMSSPEDLTK 838
>FUTS_DROME (Q9W596) Microtubule-associated protein futsch
Length = 5412
Score = 42.7 bits (99), Expect = 0.002
Identities = 61/332 (18%), Positives = 129/332 (38%), Gaps = 32/332 (9%)
Query: 54 SSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLT-PDFEGVLNAKSSKPHKTRGNHKP 112
+S+E+++ V E + + K+ + S EK P E ++ K
Sbjct: 3684 ASKEASRPASVAESVKDEAEKSKEESRRESVAEKSPLPSKEASRPTSVAESVKDEAEKSK 3743
Query: 113 RDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVN---KKNVLSSNTLKQNQL 169
++ + +V SLA+++ + RP ++ KS +++V + L +
Sbjct: 3744 EESRRESVAEKSSLASKKAS----RPASVAESVKDEAEKSKEESRRESVAEKSPLASKEA 3799
Query: 170 KTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKE 229
P + +K + +K +E SVA + K +VA + + + + +
Sbjct: 3800 SRPASVAESVKDEAEKSKEESRRESVAEKSPLPSKEASRPTSVAESVKDEADKSKEESRR 3859
Query: 230 FYSKLEEKQQAMEAEKNQNEARS-KEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDL 288
+ +MEA + + A S K+E E++ ++ RR + SP+PS P +
Sbjct: 3860 ESGAEKSPLASMEASRPTSVAESVKDETEKSKEESRRESVTEKSPLPSKEASRPTSVAES 3919
Query: 289 KKLPPTRA-----------KSPKLGRRKSNSGAVYSSEGVKEKGAAAQRKHRTSNTNNCN 337
K ++ KSP + S +V +E +K++ +++ R +
Sbjct: 3920 VKDEAEKSKEESRRESVAEKSPLASKESSRPASV--AESIKDEAEGTKQESRRESMPESG 3977
Query: 338 LSDVTNG----------SGLDGLMSKTENETE 359
++ G S D ++ ++ETE
Sbjct: 3978 KAESIKGDQSSLASKETSRPDSVVESVKDETE 4009
Score = 39.7 bits (91), Expect = 0.013
Identities = 52/268 (19%), Positives = 102/268 (37%), Gaps = 13/268 (4%)
Query: 40 TESYEHINETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAK 99
T E + E+ + S ++KE E + + D S ++ E + + K
Sbjct: 3236 TSRPESVTESVKDGKSPVASKEASRPASVAENAKDSADESKEQRPESLPQSKAGSIKDEK 3295
Query: 100 SSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVL 159
S K ++ + +V F L ++ ++RP ++ KS + ++
Sbjct: 3296 SPLASKDEAEKSKEESRRESVAEQFPLVSKE----VSRPASVAESVKDEAEKSKEESPLM 3351
Query: 160 SSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFR 219
S + P +K + +K +E SVA + K A+VA +
Sbjct: 3352 SKEASR------PASVAGSVKDEAEKSKEESRRESVAEKSPLPSKEASRPASVAESVKDE 3405
Query: 220 STERAQRRKEFYSKLEEKQQAMEAEKNQNEARS-KEEKEEAIKQLRRSLKFKASPMPSFY 278
+ + + + + + EA + + A S K+E E++ ++ RR + SP+PS
Sbjct: 3406 ADKSKEESRRESGAEKSPLASKEASRPASVAESIKDEAEKSKEESRRESVAEKSPLPS-- 3463
Query: 279 HEGPPPKVDLKKLPPTRAKSPKLGRRKS 306
E P + + KS + RR S
Sbjct: 3464 KEASRPTSVAESVKDEAEKSKEESRRDS 3491
Score = 39.3 bits (90), Expect = 0.017
Identities = 56/268 (20%), Positives = 104/268 (37%), Gaps = 11/268 (4%)
Query: 55 SEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLT-PDFEGVLNAKSSKPHKTRGNHKP- 112
S+E+++ V E + + K+ + S EK P E A ++ K
Sbjct: 2057 SKEASRPASVAESIKDEAEKSKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKE 2116
Query: 113 ---RDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQL 169
R++V P P A+ + + E +K R+SV +K+ L S +
Sbjct: 2117 ESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKEESRRESVAEKSPLPSK-----EA 2171
Query: 170 KTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKE 229
P + +K + +K +E SVA + K A+VA + + + + +
Sbjct: 2172 SRPASVAESIKDEAEKSKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKEETRR 2231
Query: 230 FYSKLEEKQQAMEAEKNQNEARS-KEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDL 288
+ + EA + + A S K+E E++ ++ RR + SP+PS P +
Sbjct: 2232 ESVAEKSPLPSKEASRPASVAESIKDEAEKSKEESRRESAAEKSPLPSKEASRPASVAES 2291
Query: 289 KKLPPTRAKSPKLGRRKSNSGAVYSSEG 316
K ++K + SG S +G
Sbjct: 2292 VKDEADKSKEESRRESMAESGKAQSIKG 2319
Score = 38.1 bits (87), Expect = 0.038
Identities = 71/303 (23%), Positives = 120/303 (39%), Gaps = 38/303 (12%)
Query: 33 GTDNHNMTESYEHINETTEHHSSEESTKEYEVK-ECTTEVSVKAPDVSNIRK-SEEKLTP 90
G+ + ES + + S ES K+ K E E + A DV I K + +K
Sbjct: 1718 GSAERSQPESVTASRDVSRPESVAESEKDDTDKPESVVESVIPASDVVEIEKGAADKEKG 1777
Query: 91 DFEGVLNAKSSKPHKTRGNHKPR-DTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHG 149
F + K P + P ++VKP R S T + P ED+K
Sbjct: 1778 VFVSLEIGKPDSPSEVISRPGPVVESVKPESRRESS-------TEIVLPCHAEDSKEPSR 1830
Query: 150 RKSV-----NKKNVLSSNTLKQNQL---KTPLVPRKPLKPDNKKHSDEDDSCSVASGTAT 201
+S ++ VL +T +++ K+ ++ +P++ S +D+S S
Sbjct: 1831 PESKVECLKDESEVLKGSTRRESVAESDKSSQPFKETSRPESAVGSMKDESMSKEPSRRE 1890
Query: 202 SVKSFKSRATVASAPS---------------FRSTERAQRRKEFYSKLEEKQQ--AMEAE 244
SVK +++ S P+ E + KE S +EK + EA
Sbjct: 1891 SVKDGAAQSRETSRPASVAESAKDGADDLKELSRPESTTQSKEAGSIKDEKSPLASEEAS 1950
Query: 245 KNQNEARS-KEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGR 303
+ + A S K+E E++ ++ RR + SP+PS E P + + KS + R
Sbjct: 1951 RPASVAESVKDEAEKSKEESRRESVAEKSPLPS--KEASRPASVAESIKDEAEKSKEESR 2008
Query: 304 RKS 306
R+S
Sbjct: 2009 RES 2011
Score = 36.6 bits (83), Expect = 0.11
Identities = 74/317 (23%), Positives = 123/317 (38%), Gaps = 26/317 (8%)
Query: 1 MGIEDSDICIIKEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTK 60
+G DS +I P VV + + +S E+ T+ + E E + S E K
Sbjct: 1784 IGKPDSPSEVISRPGPVV---ESVKPESRRESSTEIVLPCHA-EDSKEPSRPESKVECLK 1839
Query: 61 EYE--VKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKS-SKPHKTRGNHKPRDTVK 117
+ +K T SV D S+ E G + +S SK R + K
Sbjct: 1840 DESEVLKGSTRRESVAESDKSSQPFKETSRPESAVGSMKDESMSKEPSRRESVKDGAAQS 1899
Query: 118 PTVPRPFSLATERRATI-----LTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTP 172
RP S+A + L+RP +K K ++K+ L+S + P
Sbjct: 1900 RETSRPASVAESAKDGADDLKELSRPESTTQSKEAGSIK--DEKSPLASE-----EASRP 1952
Query: 173 LVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYS 232
+ +K + +K +E SVA + K A+VA S + + +
Sbjct: 1953 ASVAESVKDEAEKSKEESRRESVAEKSPLPSKEASRPASVAE--SIKDEAEKSKEESRRE 2010
Query: 233 KLEEKQQ--AMEAEKNQNEARS-KEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLK 289
+ EK + EA + + A S K+E E++ ++ RR + SP+PS E P +
Sbjct: 2011 SVAEKSPLPSKEASRPASVAESIKDEAEKSKEESRRESVAEKSPLPS--KEASRPASVAE 2068
Query: 290 KLPPTRAKSPKLGRRKS 306
+ KS + RR+S
Sbjct: 2069 SIKDEAEKSKEESRRES 2085
Score = 34.3 bits (77), Expect = 0.54
Identities = 64/294 (21%), Positives = 120/294 (40%), Gaps = 26/294 (8%)
Query: 44 EHINETTEHHSSEESTKEYEVKECTTEVSV------KAPDVSNIRKSEEKLTPDFEGVL- 96
E + E+ + SS+++T KE + SV + ++ R S D + +L
Sbjct: 3153 ESVAESVKPESSKDATSAPPSKEHSRPESVLGSLKDEGDKTTSRRVSVADSIKDEKSLLV 3212
Query: 97 NAKSSKPHKTRGNHKPRDTVKPTVPRPFSLAT---ERRATILTRPTFEEDNKGGHGRKSV 153
+ ++S+P + K RP S+ + ++ + ++ + + + S
Sbjct: 3213 SQEASRPESEAESLKDAAAPSQETSRPESVTESVKDGKSPVASKEASRPASVAENAKDSA 3272
Query: 154 NKKNVLSSNTLKQNQLKTPLVPRKPL--KPDNKKHSDEDDSCSVASGTATSVKSFKSRAT 211
++ +L Q++ + + PL K + +K +E SVA K A+
Sbjct: 3273 DESKEQRPESLPQSKAGSIKDEKSPLASKDEAEKSKEESRRESVAEQFPLVSKEVSRPAS 3332
Query: 212 VASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARS-KEEKEEAIKQLRRSLKFK 270
VA + + A++ KE E + EA + + A S K+E E++ ++ RR +
Sbjct: 3333 VAESVK----DEAEKSKE-----ESPLMSKEASRPASVAGSVKDEAEKSKEESRRESVAE 3383
Query: 271 ASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGAAA 324
SP+PS E P + + KS + RR+ SGA S KE A
Sbjct: 3384 KSPLPSK--EASRPASVAESVKDEADKSKEESRRE--SGAEKSPLASKEASRPA 3433
Score = 32.3 bits (72), Expect = 2.1
Identities = 65/326 (19%), Positives = 122/326 (36%), Gaps = 49/326 (15%)
Query: 54 SSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEK---LTPDFEGVLNAKSSKPHKTRGNH 110
S ES K+ ++ + + P V K++ ++P E VL K++ +
Sbjct: 2812 SPAESAKDAAESVEKSKDASRPPSVVESTKADSTKGDISPSPESVLEGPKDDVEKSKESS 2871
Query: 111 KPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSV----------NKKNVLS 160
+P +V ++ + R A+++ E D K R+S+ K + S
Sbjct: 2872 RP-PSVSASITGDSTKDVSRPASVVESVKDEHD-KAESRRESIAKVESVIDEAGKSDSKS 2929
Query: 161 SNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDS--------CSVASGTATSVKS---FKSR 209
S+ Q K+ L ++ + ++ S +DD+ +ASG +S S+
Sbjct: 2930 SSQDSQKDEKSTLASKEASRRESVVESSKDDAEKSESRPESVIASGEPVPRESKSPLDSK 2989
Query: 210 ATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAE-----KNQNEARSK------EEKEE 258
T S + E S+ E ++++A+ K+Q +R ++ +E
Sbjct: 2990 DTSRPGSMVESVTAEDEKSEQQSRRESVAESVKADTKKDGKSQEASRPSSVDELLKDDDE 3049
Query: 259 AIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVK 318
+ R+S+ M + E P K D K P+R +S + N+ S G +
Sbjct: 3050 KQESRRQSITGSHKAMSTMGDESPMDKAD-KSKEPSRPESVAESIKHENTKDEESPLGSR 3108
Query: 319 EKGAAAQRKHRTSNTNNCNLSDVTNG 344
A K SD+T G
Sbjct: 3109 RDSVAESIK-----------SDITKG 3123
>MAPB_RAT (P15205) Microtubule-associated protein 1B (MAP 1B)
(Neuraxin) [Contains: MAP1 light chain LC1]
Length = 2459
Score = 42.0 bits (97), Expect = 0.003
Identities = 64/282 (22%), Positives = 107/282 (37%), Gaps = 44/282 (15%)
Query: 54 SSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPR 113
S + +TK K E +AP+ + + E+ + + + K KP K KP
Sbjct: 543 SLKPATKPLSSKSVRKESKEEAPEATKASQVEKTPKVESKEKVIVKKDKPGKVES--KPS 600
Query: 114 DTVKPTVPR----PFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQL 169
T K + P +A ++P +D V KK + + K+ +
Sbjct: 601 VTEKEVPSKEEQSPVKAEVAEKAATESKPKVTKDK--------VVKKEIKTKPEEKKEEK 652
Query: 170 KTPLVPRK----PLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQ 225
V +K PLK D K +E + K K + E+ +
Sbjct: 653 PKKEVAKKEDKTPLKKDEKPKKEE------------AKKEIKKE--------IKKEEKKE 692
Query: 226 RRKEFYSKLEEKQQAMEAEKNQNEARSKEEKE--EAIKQLRRSLKFKASPMPSFYHEGP- 282
+KE + K E +K++ + KEEKE + IK++ + +K K++P+
Sbjct: 693 LKKEVKKETPLKDAKKEVKKDEKKEVKKEEKEPKKEIKKISKDIK-KSTPLSDTKKPAAL 751
Query: 283 PPKVDLKKLPPTRAKSPKLGRRKSNSGA-VYSSEGVKEKGAA 323
PKV KK PT+ + G+ K V EG + AA
Sbjct: 752 KPKV-AKKEEPTKKEPIAAGKLKDKGKVKVIKKEGKTTEAAA 792
Score = 40.8 bits (94), Expect = 0.006
Identities = 43/210 (20%), Positives = 81/210 (38%), Gaps = 2/210 (0%)
Query: 91 DFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGR 150
D G ++ K K + R+++KP +P S + R+ + P + ++
Sbjct: 519 DLTGQVSTPPVKQVKLKQRADSRESLKPAT-KPLSSKSVRKESKEEAPEATKASQVEKTP 577
Query: 151 KSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRA 210
K +K+ V+ P V K + P ++ S + + T + K K +
Sbjct: 578 KVESKEKVIVKKDKPGKVESKPSVTEKEV-PSKEEQSPVKAEVAEKAATESKPKVTKDKV 636
Query: 211 TVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFK 270
+ ++ ++ K+ +K E+K + EK + E KE K+E K+ ++ LK +
Sbjct: 637 VKKEIKTKPEEKKEEKPKKEVAKKEDKTPLKKDEKPKKEEAKKEIKKEIKKEEKKELKKE 696
Query: 271 ASPMPSFYHEGPPPKVDLKKLPPTRAKSPK 300
K D KK K PK
Sbjct: 697 VKKETPLKDAKKEVKKDEKKEVKKEEKEPK 726
>SFRC_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12
(Serine-arginine-rich splicing regulatory protein 86)
(SRrp86) (SR-related protein of 86 kDa)
Length = 494
Score = 41.6 bits (96), Expect = 0.003
Identities = 60/283 (21%), Positives = 99/283 (34%), Gaps = 44/283 (15%)
Query: 109 NHKPRDTVKPTVPRPFSLATE--------RRATILTRPTFEEDN------KGGHGRKSVN 154
NH VKP P + A E R A E ++ KGG R
Sbjct: 141 NHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTR 200
Query: 155 KKNVLSSNTLKQ-------------NQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTAT 201
K+ SS + + N+ ++ R K +KK S + S + +
Sbjct: 201 SKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRARSKSPHKKRSKSRERRKSRSRSRS 260
Query: 202 SVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEE----KQQAMEAEKNQNEARSKEEKE 257
K +R V R E+ + R++ K +E K + E EK+ + R KE+++
Sbjct: 261 RDKRKDTREKVKERVKEREREKEKEREKEREKDKERGKNKDKDREKEKDHEKERDKEKEK 320
Query: 258 EAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGV 317
E K R + + D K+ ++++P S S E
Sbjct: 321 EQDKDKER-------------EKDRSKEADEKRKKEKKSRTPPRSYNSSRRSRSASRERR 367
Query: 318 KEKGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENETEH 360
+ + ++ R RTS T S + G + K E E +H
Sbjct: 368 RRRSRSSSRSPRTSKTIKRKSSRSPSPRGRNKKEKKREKERDH 410
>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)
[Contains: Micronuclear linker histone-alpha;
Micronuclear linker histone-beta; Micronuclear linker
histone-delta; Micronuclear linker histone-gamma]
Length = 633
Score = 41.6 bits (96), Expect = 0.003
Identities = 61/318 (19%), Positives = 114/318 (35%), Gaps = 29/318 (9%)
Query: 25 SQDSGHETGTDN-HNMTESYEHINETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNIR- 82
S G + T N N + S + + + SS K+ + S + S+ +
Sbjct: 246 SNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSKNKKSSSSKGRKSSSSRGRKASSSKN 305
Query: 83 ----KSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRP 138
KS+++ + +G ++ SSK +K + + + R S + ER+ +
Sbjct: 306 RKSSKSKDRKSSSSKGRKSSSSSKSNKRKASSSRGRKSSSSKGRKSSKSQERKNSHADTS 365
Query: 139 TFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASG 198
ED + S + K SS ++N +K + K +NK S S S + G
Sbjct: 366 KQMEDEGQKRRQSSSSAKRDESSKKSRRNSMKEA----RTKKANNKSASKASKSGSKSKG 421
Query: 199 TATSVK----SFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKE 254
+ S S K + + + + S + AQ + + + A + + R +E
Sbjct: 422 KSASKSKGKSSSKGKNSKSRSASKPKSNAAQNSNNTHQTADSSENASSTTQTRTRGRQRE 481
Query: 255 EKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSS 314
+K+ + K+S K TR+KS KS A S
Sbjct: 482 QKD----MVNEKSNSKSS-----------SKGKKNSKSNTRSKSKSKSASKSRKNASKSK 526
Query: 315 EGVKEKGAAAQRKHRTSN 332
+ G + K R+ +
Sbjct: 527 KDTTNHGRQTRSKSRSES 544
Score = 33.9 bits (76), Expect = 0.71
Identities = 50/242 (20%), Positives = 96/242 (39%), Gaps = 40/242 (16%)
Query: 99 KSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNV 158
K+S R + K + +V R S +++RRA D+ GR + N
Sbjct: 179 KNSTSKSRRSSSKGKSSVSKG--RTKSTSSKRRA----------DSSASQGRSQSSSSNR 226
Query: 159 LSSNTLKQNQLKTPLVPRKPLKPDNKKHSDED----DSCSVASGTATSVKSFKSRATVAS 214
+++ K +Q T RK +K+S + S S S ++ + KS S+ +S
Sbjct: 227 RKASSSK-DQKGTRSSSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSKNKKSS 285
Query: 215 APSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPM 274
+ R + ++ RK + KN+ ++SK+ K + K + S K++
Sbjct: 286 SSKGRKSSSSRGRKA------------SSSKNRKSSKSKDRKSSSSKGRKSSSSSKSNKR 333
Query: 275 PSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYS----SEGVKEKGAAAQRKHRT 330
+ G +K ++ + + + NS A S EG K + +++ K
Sbjct: 334 KASSSRG-------RKSSSSKGRKSSKSQERKNSHADTSKQMEDEGQKRRQSSSSAKRDE 386
Query: 331 SN 332
S+
Sbjct: 387 SS 388
>MAPB_MOUSE (P14873) Microtubule-associated protein 1B (MAP 1B)
(MAP1.2) (MAP1(X)) [Contains: MAP1 light chain LC1]
Length = 2464
Score = 41.6 bits (96), Expect = 0.003
Identities = 56/273 (20%), Positives = 101/273 (36%), Gaps = 26/273 (9%)
Query: 54 SSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPR 113
S + +TK K E + P+V+ + E+ + + + K KP KT
Sbjct: 544 SLKPATKPVASKSVRKESKEETPEVTKTSQVEKTPKVESKEKVLVKKDKPVKTES----- 598
Query: 114 DTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPL 173
KP+V + E ++ + +++ K ++ + + + ++KT L
Sbjct: 599 ---KPSVTEKEVSSKEEQSPVKAEVA---------EKQATESKPKVTKDKVVKKEIKTKL 646
Query: 174 VPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSK 233
+K KP + ED + K K + ER + +KE +
Sbjct: 647 EEKKEEKPKKEVVKKEDKT-----PLKKDEKPRKEEVKKEIKKEIKKEERKELKKEVKKE 701
Query: 234 LEEKQQAMEAEKNQNEARSKEEKE--EAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKL 291
K E +K + + KEEKE + IK++ + +K + PKV KK
Sbjct: 702 TPLKDAKKEVKKEEKKEVKKEEKEPKKEIKKISKDIKKSTPQSDTKKPSALKPKV-AKKE 760
Query: 292 PPTRAKSPKLGRRKSNSGA-VYSSEGVKEKGAA 323
T+ + G+ K V EG + AA
Sbjct: 761 ESTKKEPLAAGKLKDKGKVKVIKKEGKTTEAAA 793
Score = 38.1 bits (87), Expect = 0.038
Identities = 47/212 (22%), Positives = 79/212 (37%), Gaps = 6/212 (2%)
Query: 91 DFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGR 150
D G + K K + R+++KP +P + + R+ + P + ++
Sbjct: 520 DLTGQVPTPPVKQVKLKQRADSRESLKPAT-KPVASKSVRKESKEETPEVTKTSQVEKTP 578
Query: 151 KSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKS--FKS 208
K +K+ VL K +KT P K + K VA AT K K
Sbjct: 579 KVESKEKVLVK---KDKPVKTESKPSVTEKEVSSKEEQSPVKAEVAEKQATESKPKVTKD 635
Query: 209 RATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLK 268
+ + ++ ++ K+ K E+K + EK + E KE K+E K+ R+ LK
Sbjct: 636 KVVKKEIKTKLEEKKEEKPKKEVVKKEDKTPLKKDEKPRKEEVKKEIKKEIKKEERKELK 695
Query: 269 FKASPMPSFYHEGPPPKVDLKKLPPTRAKSPK 300
+ K + KK K PK
Sbjct: 696 KEVKKETPLKDAKKEVKKEEKKEVKKEEKEPK 727
>CDT1_SCHPO (P40382) Cell division cycle protein cdt1
Length = 444
Score = 41.6 bits (96), Expect = 0.003
Identities = 26/110 (23%), Positives = 57/110 (51%), Gaps = 14/110 (12%)
Query: 150 RKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKP----DNKKHSDEDDSCSVASGTATSVKS 205
+ +VN+ +++ L+++ + +P + L+P + K+++E SCS+ ++T KS
Sbjct: 215 KNTVNESSLVRKLNLEKSTSRELRIPTQTLEPKFTTNTAKYANELVSCSMLDSSSTLSKS 274
Query: 206 FKSRATVASAPSFRSTERAQRR----------KEFYSKLEEKQQAMEAEK 245
S+ + S S S + + R+ + ++ +KQ+AMEA+K
Sbjct: 275 VNSKINLKSHQSSSSVQNSSRKLTSSQLTLRQSSLFDRVRKKQKAMEAKK 324
>SFRC_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12
(Serine-arginine-rich splicing regulatory protein 86)
(SRrp86)
Length = 494
Score = 41.2 bits (95), Expect = 0.004
Identities = 59/283 (20%), Positives = 100/283 (34%), Gaps = 44/283 (15%)
Query: 109 NHKPRDTVKPTVPRPFSLATE--------RRATILTRPTFEEDN------KGGHGRKSVN 154
NH VKP P + A E R A E ++ KGG R
Sbjct: 141 NHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTR 200
Query: 155 KKNVLSSNTLKQ-------------NQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTAT 201
K+ SS + + N+ ++ R+ K +KK S + S + +
Sbjct: 201 SKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRS 260
Query: 202 SVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEE----KQQAMEAEKNQNEARSKEEKE 257
K +R V + E+ + R++ K +E K + E EK+ + R KE+++
Sbjct: 261 RDKRKDTREKVKERVKEKEREKEREREKDREKDKERGKNKDKDREKEKDHEKERDKEKEK 320
Query: 258 EAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGV 317
E K R + + D K+ ++++P S S E
Sbjct: 321 EQDKDKER-------------EKDRSKETDEKRKKEKKSRTPPRSYNASRRSRSTSRERR 367
Query: 318 KEKGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENETEH 360
+ + ++ R RTS T S + G + K E E +H
Sbjct: 368 RRRSRSSSRSPRTSKTVKRKSSRSPSPRGRNKKEKKREKERDH 410
>MINT_HUMAN (Q96T58) Msx2-interacting protein (SMART/HDAC1 associated
repressor protein)
Length = 3664
Score = 40.8 bits (94), Expect = 0.006
Identities = 64/303 (21%), Positives = 114/303 (37%), Gaps = 37/303 (12%)
Query: 96 LNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNK 155
L ++ K +T + D P P S T RR T + ++ V +
Sbjct: 1868 LKMEAEKITRTASKNSAADLEHPEPSLPLS-RTRRRNVRSVYATMGDHENRSPVKEPVEQ 1926
Query: 156 KNVLSSNTLKQNQ--LKTPLVPRKPLKPDNKKHSDEDDSCSVASGTAT-----SVKSFKS 208
V ++ Q P PR+ P ++ +DE++ T +S +S
Sbjct: 1927 PRVTRKRLERELQEAAAVPTTPRRGRPPKTRRRADEEEENEAKEPAETLKPPEGWRSPRS 1986
Query: 209 RATVA----------SAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEE 258
+ T A + P +T R + E ++ K+ +ME + + EA S+++++
Sbjct: 1987 QKTAAGGGPQGKKGKNEPKVDAT-RPEATTEVGPQIGVKESSMEPKAAEEEAGSEQKRD- 2044
Query: 259 AIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVK 318
R+ +P E P +V KK P + K GR +++ AV S +K
Sbjct: 2045 -----RKDAGTDKNP-----PETAPVEVVEKKPAPEKNSKSKRGRSRNSRLAVDKSASLK 2094
Query: 319 E-------KGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENETEHTKLIEEINMIK 371
+GAAAQ R S + + DGL S+ +++ E +
Sbjct: 2095 NVDAAVSPRGAAAQAGERESGVVAVSPEKSESPQKEDGLSSQLKSDPVDPDKEPEKEDVS 2154
Query: 372 ANG 374
A+G
Sbjct: 2155 ASG 2157
>ANRY_HUMAN (Q6UB99) Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor-1)
Length = 2664
Score = 40.8 bits (94), Expect = 0.006
Identities = 56/239 (23%), Positives = 96/239 (39%), Gaps = 21/239 (8%)
Query: 39 MTESYEHINETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNA 98
+T ++ +E + S + K E ++ + K+P +S+ + KL D EG
Sbjct: 574 LTSESDYSSEGSSVESLKPVRKRQEHRKRASLSEKKSPFLSSAEGAVPKL--DKEG---- 627
Query: 99 KSSKPHKTRGNHKPRDTVKPTVPRPFSLAT----------ERRATILTRPTFEEDNKGG- 147
K K HKT+ HK ++ + ++ + L + + IL +NK
Sbjct: 628 KVVKKHKTKHKHKNKEKGQCSISQELKLKSFTYEYEDSKQKSDKAILLENDLSTENKLKV 687
Query: 148 --HGRKSVNKKNVLSSNTLKQNQ-LKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVK 204
H R K+ LS L++ + L K +K NK S S A +
Sbjct: 688 LKHDRDHFKKEEKLSKMKLEEKEWLFKDEKSLKRIKDTNKDISRSFREEKDRSNKAEKER 747
Query: 205 SFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAE-KNQNEARSKEEKEEAIKQ 262
S K ++ ER ++ K+ SKLE+K E + + E KE+KE+ K+
Sbjct: 748 SLKEKSPKEEKLRLYKEERKKKSKDRPSKLEKKNDLKEDKISKEKEKIFKEDKEKLKKE 806
Score = 34.3 bits (77), Expect = 0.54
Identities = 73/375 (19%), Positives = 136/375 (35%), Gaps = 67/375 (17%)
Query: 31 ETGTDNHNMTESYEHINETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNI--------- 81
E G D + ES + E + + E E+KEC E K +
Sbjct: 947 EAGRDRKDALESCK---ERRDGRAKPEEVHREELKECGCESGFKDKSDGDFGKGLEPWER 1003
Query: 82 ----RKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTR 137
R+ E+K PD E + +KP + + +D + ++ E +
Sbjct: 1004 HHPAREKEKKDGPDKE---RKEKTKPERYKEKSSDKDKSEKSILEKCQKDKEFDKCFKEK 1060
Query: 138 PTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKK------------ 185
+E +K HG+ K ++ K+ + K D+KK
Sbjct: 1061 KDTKEKHKDTHGKDKERKASLDQGKEKKEKAFPGIISEDFSEKKDDKKGKEKSWYIADIF 1120
Query: 186 ---HSDEDDSC---SVASGTATSV-------KSFKSRATVASAPSFRSTER--AQRRKEF 230
D+ DSC G A+ + + + R AS +S+++ +R+K+
Sbjct: 1121 TDESEDDRDSCMGSGFKMGEASDLPRTDGLQEKEEGREAYASDRHRKSSDKQHPERQKDK 1180
Query: 231 YSKLEEKQQ-AMEAEKNQNE---ARSKEEKEEAIKQLRRSLKFKA---SPMPSFYHEGPP 283
+ K + A +A +++ E + KE+K++ + + K +A S + P
Sbjct: 1181 EPRDRRKDRGAADAGRDKKEKVFEKHKEKKDKESTEKYKDRKDRASVDSTQDKKNKQKLP 1240
Query: 284 PKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGAAAQRK----------HRTSNT 333
K + K +AKS + K S +S E + A A++ H
Sbjct: 1241 EKAEKKHAAEDKAKS----KHKEKSDKEHSKERKSSRSADAEKSLLEKLEEEALHEYRED 1296
Query: 334 NNCNLSDVTNGSGLD 348
+N +S+V++ S D
Sbjct: 1297 SNDKISEVSSDSFTD 1311
>U2R2_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliary
factor 35 kDa subunit related-protein 2 (U2(RNU2) small
nuclear RNA auxillary factor 1-like 2)
Length = 462
Score = 40.4 bits (93), Expect = 0.008
Identities = 29/113 (25%), Positives = 52/113 (45%), Gaps = 16/113 (14%)
Query: 219 RSTERAQRRKEFYSKLE---EKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMP 275
+ E +R++E KL+ E+QQ E E+ + + + K E+EEA++++ + +
Sbjct: 96 KEEEARKRKEELERKLKAEWEEQQRKEREEEEQKRQEKREREEAVQKMLDQAENELENGG 155
Query: 276 SFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGAAAQRKH 328
++ + P P +D++ L RA P YS G G RKH
Sbjct: 156 TW--QNPEPPMDIRVLEKDRANCP-----------FYSKTGACRFGDRCSRKH 195
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.305 0.123 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,650,859
Number of Sequences: 164201
Number of extensions: 1995080
Number of successful extensions: 8885
Number of sequences better than 10.0: 383
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 337
Number of HSP's that attempted gapping in prelim test: 7779
Number of HSP's gapped (non-prelim): 984
length of query: 383
length of database: 59,974,054
effective HSP length: 112
effective length of query: 271
effective length of database: 41,583,542
effective search space: 11269139882
effective search space used: 11269139882
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 67 (30.4 bits)
Medicago: description of AC145202.1