BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145157.11 + phase: 0 
         (74 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AR34_DROME (Q9VIM5) Probable ARP2/3 complex 34 kDa subunit (P34-...    30  0.87
AR34_HUMAN (O15144) ARP2/3 complex 34 kDa subunit (P34-ARC) (Act...    29  2.5
AR34_SCHPO (O14241) Probable ARP2/3 complex 34 kDa subunit (P34-...    28  4.3
RPC9_YEAST (P28000) DNA-directed RNA polymerases I and III 16 kD...    27  7.3

>AR34_DROME (Q9VIM5) Probable ARP2/3 complex 34 kDa subunit
           (P34-ARC)
          Length = 301

 Score = 30.4 bits (67), Expect = 0.87
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)

Query: 29  GAIEAIKAAYGSLVQILDPPRDGFNLTLKINLSKVP 64
           GA E +K  YGSL   L    +G+N+++ INL ++P
Sbjct: 71  GADELLKREYGSL---LTDTEEGYNVSVLINLEEIP 103


>AR34_HUMAN (O15144) ARP2/3 complex 34 kDa subunit (P34-ARC)
           (Actin-related protein 2/3 complex subunit 2)
          Length = 300

 Score = 28.9 bits (63), Expect = 2.5
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 29  GAIEAIKAAYGSLVQILDPPRDGFNLTLKINLSKVPANQ 67
           GA E +K  YGS    L  P  G+N++L  +L  +PA++
Sbjct: 71  GADELLKRVYGSF---LVNPESGYNVSLLYDLENLPASK 106


>AR34_SCHPO (O14241) Probable ARP2/3 complex 34 kDa subunit
          (P34-ARC)
          Length = 317

 Score = 28.1 bits (61), Expect = 4.3
 Identities = 12/38 (31%), Positives = 23/38 (59%), Gaps = 3/38 (7%)

Query: 28 FGAIEAIKAAYGSLVQILDPPRDGFNLTLKINLSKVPA 65
          +G ++ +K  YG+ V     P  G+N ++ I+L ++PA
Sbjct: 65 YGTLDLLKQIYGAYVH---EPEMGYNFSILIDLQQLPA 99


>RPC9_YEAST (P28000) DNA-directed RNA polymerases I and III 16 kDa
           polypeptide (EC 2.7.7.6) (AC19)
          Length = 142

 Score = 27.3 bits (59), Expect = 7.3
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 1   MKNPNIFLLSVSLPTPSSETIFVCGLPFGAIEAIKAAYGSLVQILD 46
           MKNP++     S+P PS   + +    +G   A+ A    L  ++D
Sbjct: 81  MKNPDVEFCGYSIPHPSENLLNIRIQTYGETTAVDALQKGLKDLMD 126


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.321    0.141    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,845,829
Number of Sequences: 164201
Number of extensions: 288134
Number of successful extensions: 715
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 714
Number of HSP's gapped (non-prelim): 4
length of query: 74
length of database: 59,974,054
effective HSP length: 50
effective length of query: 24
effective length of database: 51,764,004
effective search space: 1242336096
effective search space used: 1242336096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)