BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144931.17 + phase: 0 /pseudo/partial
         (50 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

RPN2_SCHPO (O74762) 26S proteasome regulatory subunit rpn2             33  0.19

>RPN2_SCHPO (O74762) 26S proteasome regulatory subunit rpn2
          Length = 965

 Score = 32.7 bits (73), Expect = 0.19
 Identities = 12/26 (46%), Positives = 22/26 (84%)

Query: 3  TTLVSSAGGMLAMLNESHISLKIHAL 28
          T++++SAGG++A+L+E    L++HAL
Sbjct: 9  TSIITSAGGLMALLDEQERELQVHAL 34


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.316    0.123    0.349 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,830,410
Number of Sequences: 164201
Number of extensions: 99454
Number of successful extensions: 155
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 154
Number of HSP's gapped (non-prelim): 1
length of query: 50
length of database: 59,974,054
effective HSP length: 26
effective length of query: 24
effective length of database: 55,704,828
effective search space: 1336915872
effective search space used: 1336915872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)