BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144931.14 - phase: 0 /pseudo
(122 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RS16_GOSHI (P46293) 40S ribosomal protein S16 130 4e-31
RS16_FRIAG (O22647) 40S ribosomal protein S16 127 6e-30
RS16_ARATH (Q42340) 40S ribosomal protein S16 123 8e-29
RS16_TORRU (Q9XEK7) 40S ribosomal protein S16 112 1e-25
RS16_ORYSA (P46294) 40S ribosomal protein S16 105 1e-23
RS16_SCHPO (O60144) 40S ribosomal protein S16 104 4e-23
RS16_RAT (P62250) 40S ribosomal protein S16 103 7e-23
RS16_PIG (Q29201) 40S ribosomal protein S16 (Fragment) 103 7e-23
RS16_MOUSE (P14131) 40S ribosomal protein S16 103 7e-23
RS16_HUMAN (P62249) 40S ribosomal protein S16 103 7e-23
RS16_ICTPU (Q90YQ7) 40S ribosomal protein S16 102 2e-22
RS16_HETFO (Q98TR7) 40S ribosomal protein S16 102 2e-22
RS16_DROME (Q9W237) 40S ribosomal protein S16 97 8e-21
RS16_CAEEL (Q22054) 40S ribosomal protein S16 96 1e-20
RS16_YEAST (P40213) 40S ribosomal protein S16 (RP61R) 96 2e-20
RS16_AEDAE (P62251) 40S ribosomal protein S16 95 3e-20
RS16_SPOFR (Q95V31) 40S ribosomal protein S16 94 4e-20
RS16_SACEX (Q876B4) 40S ribosomal protein S16 94 4e-20
RS16_CANAL (O94017) 40S ribosomal protein S16 94 7e-20
RS16_LUPPO (P16149) 40S ribosomal protein S16 86 1e-17
>RS16_GOSHI (P46293) 40S ribosomal protein S16
Length = 145
Score = 130 bits (328), Expect = 4e-31
Identities = 63/69 (91%), Positives = 64/69 (92%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
+E VQCFGRKK AVAVTHCKRGRGLIKINGCPIELVEPEILRFKA EPILLLGR RF GV
Sbjct: 6 IESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAVEPILLLGRQRFTGV 65
Query: 61 DMRIRVKGG 69
DMRIRVKGG
Sbjct: 66 DMRIRVKGG 74
>RS16_FRIAG (O22647) 40S ribosomal protein S16
Length = 145
Score = 127 bits (318), Expect = 6e-30
Identities = 59/68 (86%), Positives = 64/68 (93%)
Query: 2 EQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVD 61
E VQCFGRKK AVAVTHCKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGRHRF GVD
Sbjct: 7 ESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRHRFVGVD 66
Query: 62 MRIRVKGG 69
MRIRV+GG
Sbjct: 67 MRIRVRGG 74
>RS16_ARATH (Q42340) 40S ribosomal protein S16
Length = 146
Score = 123 bits (308), Expect = 8e-29
Identities = 56/68 (82%), Positives = 62/68 (90%)
Query: 2 EQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVD 61
E VQCFGRKK AVAVTHCKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRFAGV+
Sbjct: 8 ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67
Query: 62 MRIRVKGG 69
MRIRV GG
Sbjct: 68 MRIRVNGG 75
>RS16_TORRU (Q9XEK7) 40S ribosomal protein S16
Length = 142
Score = 112 bits (280), Expect = 1e-25
Identities = 54/69 (78%), Positives = 63/69 (91%), Gaps = 1/69 (1%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
+E VQCFGRKK AVAVT+C+RGRGLI++ PIELVEPEILR+KA+EP+LLLGR +FAGV
Sbjct: 4 VESVQCFGRKKTAVAVTYCRRGRGLIRLT-VPIELVEPEILRYKAFEPVLLLGRSKFAGV 62
Query: 61 DMRIRVKGG 69
DMRIRVKGG
Sbjct: 63 DMRIRVKGG 71
>RS16_ORYSA (P46294) 40S ribosomal protein S16
Length = 149
Score = 105 bits (263), Expect = 1e-23
Identities = 49/66 (74%), Positives = 57/66 (86%)
Query: 4 VQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMR 63
VQCFGRKK AVAV++CK GRGLIK+NG PIEL+ PE+LR KA+EPILL GR RF +DMR
Sbjct: 13 VQCFGRKKAAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMR 72
Query: 64 IRVKGG 69
IRV+GG
Sbjct: 73 IRVRGG 78
>RS16_SCHPO (O60144) 40S ribosomal protein S16
Length = 140
Score = 104 bits (259), Expect = 4e-23
Identities = 46/69 (66%), Positives = 56/69 (80%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
M+ VQCFG+K NA AV HCK G+GLIK+NG P+ LV+PEILR K YEPIL+ G +FAGV
Sbjct: 1 MQSVQCFGKKGNATAVAHCKVGKGLIKVNGAPLSLVQPEILRMKVYEPILVAGADKFAGV 60
Query: 61 DMRIRVKGG 69
D+R+RV GG
Sbjct: 61 DIRVRVSGG 69
>RS16_RAT (P62250) 40S ribosomal protein S16
Length = 145
Score = 103 bits (257), Expect = 7e-23
Identities = 45/69 (65%), Positives = 57/69 (82%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
++ VQ FGRKK A AV HCKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGV
Sbjct: 6 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 65
Query: 61 DMRIRVKGG 69
D+R+RVKGG
Sbjct: 66 DIRVRVKGG 74
>RS16_PIG (Q29201) 40S ribosomal protein S16 (Fragment)
Length = 135
Score = 103 bits (257), Expect = 7e-23
Identities = 45/69 (65%), Positives = 57/69 (82%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
++ VQ FGRKK A AV HCKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGV
Sbjct: 6 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 65
Query: 61 DMRIRVKGG 69
D+R+RVKGG
Sbjct: 66 DIRVRVKGG 74
>RS16_MOUSE (P14131) 40S ribosomal protein S16
Length = 145
Score = 103 bits (257), Expect = 7e-23
Identities = 45/69 (65%), Positives = 57/69 (82%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
++ VQ FGRKK A AV HCKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGV
Sbjct: 6 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 65
Query: 61 DMRIRVKGG 69
D+R+RVKGG
Sbjct: 66 DIRVRVKGG 74
>RS16_HUMAN (P62249) 40S ribosomal protein S16
Length = 145
Score = 103 bits (257), Expect = 7e-23
Identities = 45/69 (65%), Positives = 57/69 (82%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
++ VQ FGRKK A AV HCKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGV
Sbjct: 6 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGV 65
Query: 61 DMRIRVKGG 69
D+R+RVKGG
Sbjct: 66 DIRVRVKGG 74
>RS16_ICTPU (Q90YQ7) 40S ribosomal protein S16
Length = 146
Score = 102 bits (253), Expect = 2e-22
Identities = 45/69 (65%), Positives = 56/69 (80%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
++ VQ FGRKK A AV HCKRG GLIK+NG P+E +EP L++K EP+LLLG+ RFAGV
Sbjct: 7 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGV 66
Query: 61 DMRIRVKGG 69
D+R+RVKGG
Sbjct: 67 DIRVRVKGG 75
>RS16_HETFO (Q98TR7) 40S ribosomal protein S16
Length = 146
Score = 102 bits (253), Expect = 2e-22
Identities = 45/69 (65%), Positives = 56/69 (80%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
++ VQ FGRKK A AV HCKRG GLIK+NG P+E +EP L++K EP+LLLG+ RFAGV
Sbjct: 7 LQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGV 66
Query: 61 DMRIRVKGG 69
D+R+RVKGG
Sbjct: 67 DIRVRVKGG 75
>RS16_DROME (Q9W237) 40S ribosomal protein S16
Length = 148
Score = 96.7 bits (239), Expect = 8e-21
Identities = 41/69 (59%), Positives = 57/69 (82%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
++ VQ FGRKK A AV +CKRG GL+K+NG P+E +EP++L++K EP+LLLG+ +FAGV
Sbjct: 9 VQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGV 68
Query: 61 DMRIRVKGG 69
D+R+RV GG
Sbjct: 69 DIRVRVSGG 77
>RS16_CAEEL (Q22054) 40S ribosomal protein S16
Length = 144
Score = 96.3 bits (238), Expect = 1e-20
Identities = 43/69 (62%), Positives = 55/69 (79%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
++ VQ FGRKK A AV HCK+G+GLIK+NG P+E +EP+ILR K EP+LL+G+ RF V
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64
Query: 61 DMRIRVKGG 69
D+RIRV GG
Sbjct: 65 DIRIRVSGG 73
>RS16_YEAST (P40213) 40S ribosomal protein S16 (RP61R)
Length = 142
Score = 95.5 bits (236), Expect = 2e-20
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 4 VQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMR 63
VQ FG+KK+A AV H K G+GLIK+NG PI LVEPEILRFK YEP+LL+G +F+ +D+R
Sbjct: 6 VQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIR 65
Query: 64 IRVKGG 69
+RV GG
Sbjct: 66 VRVTGG 71
>RS16_AEDAE (P62251) 40S ribosomal protein S16
Length = 148
Score = 94.7 bits (234), Expect = 3e-20
Identities = 40/66 (60%), Positives = 56/66 (84%)
Query: 4 VQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMR 63
VQ FGRKK A AV +CKRG+GL+++NG P++ +EP++L++K EP+LLLG+ +FAGVD+R
Sbjct: 12 VQVFGRKKTATAVAYCKRGKGLLRVNGRPLDQIEPKVLQYKLQEPLLLLGKEKFAGVDIR 71
Query: 64 IRVKGG 69
IRV GG
Sbjct: 72 IRVSGG 77
>RS16_SPOFR (Q95V31) 40S ribosomal protein S16
Length = 151
Score = 94.4 bits (233), Expect = 4e-20
Identities = 40/69 (57%), Positives = 57/69 (81%)
Query: 1 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
++ VQ FGRKK A AV +CKRG G++++NG P++LVEP +L++K EPILLLG+ +F+GV
Sbjct: 12 IQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGV 71
Query: 61 DMRIRVKGG 69
D+R+ VKGG
Sbjct: 72 DIRVTVKGG 80
>RS16_SACEX (Q876B4) 40S ribosomal protein S16
Length = 142
Score = 94.4 bits (233), Expect = 4e-20
Identities = 42/66 (63%), Positives = 53/66 (79%)
Query: 4 VQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMR 63
VQ FG+KK+A AV H K G+GLIK+NG PI LV+PEILRFK YEP+LL+G +F +D+R
Sbjct: 6 VQTFGKKKSATAVAHVKAGKGLIKVNGAPITLVQPEILRFKVYEPLLLVGLDKFTNIDIR 65
Query: 64 IRVKGG 69
+RV GG
Sbjct: 66 VRVTGG 71
>RS16_CANAL (O94017) 40S ribosomal protein S16
Length = 142
Score = 93.6 bits (231), Expect = 7e-20
Identities = 42/68 (61%), Positives = 53/68 (77%)
Query: 2 EQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVD 61
+ VQ FG+KK A AV H K G+GLIKING PI LV+PEILRFK YEP+ L+G +F G+D
Sbjct: 4 QSVQTFGKKKTATAVAHVKAGKGLIKINGSPITLVQPEILRFKVYEPLTLVGLDKFQGID 63
Query: 62 MRIRVKGG 69
+R++V GG
Sbjct: 64 IRVKVTGG 71
>RS16_LUPPO (P16149) 40S ribosomal protein S16
Length = 145
Score = 86.3 bits (212), Expect = 1e-17
Identities = 42/46 (91%), Positives = 44/46 (95%)
Query: 24 GLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGG 69
GLIKING PIELVEPEILRFKA+EPILLLG+ RFAGVDMRIRVKGG
Sbjct: 29 GLIKINGSPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGG 74
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.325 0.147 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,863,185
Number of Sequences: 164201
Number of extensions: 322984
Number of successful extensions: 723
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 90
length of query: 122
length of database: 59,974,054
effective HSP length: 98
effective length of query: 24
effective length of database: 43,882,356
effective search space: 1053176544
effective search space used: 1053176544
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144931.14