Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144893.1 + phase: 0 /pseudo
         (311 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PMT2_YEAST (P31382) Dolichyl-phosphate-mannose--protein mannosyl...    36  0.11
HEM1_METAC (Q8TT60) Glutamyl-tRNA reductase (EC 1.2.1.-) (GluTR)       32  2.6
NORV_VIBVU (Q8D4F8) Anaerobic nitric oxide reductase flavorubred...    30  5.9
P3K1_SOYBN (P42347) Phosphatidylinositol 3-kinase, root isoform ...    30  7.7

>PMT2_YEAST (P31382) Dolichyl-phosphate-mannose--protein
           mannosyltransferase 2 (EC 2.4.1.109)
          Length = 759

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 20/78 (25%), Positives = 33/78 (41%), Gaps = 6/78 (7%)

Query: 169 TDKSQWAVDVVYLKFFRNIDLVSSFSWGVAALAHLY*ELNNAARWNCSQMAGYLTLFVYG 228
           T  S WA  V  L F   + ++    W        Y +L N + WN   M G+  L  +G
Sbjct: 607 TPASTWASSVAVLAFMATV-VILLIRW-----QRQYVDLRNPSNWNVFLMGGFYPLLAWG 660

Query: 229 LYIYTWLSLVQAWVFHHF 246
           L+   ++ + +    HH+
Sbjct: 661 LHYMPFVIMSRVTYVHHY 678


>HEM1_METAC (Q8TT60) Glutamyl-tRNA reductase (EC 1.2.1.-) (GluTR)
          Length = 460

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 27/95 (28%), Positives = 43/95 (44%), Gaps = 3/95 (3%)

Query: 52  SSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHGFISRDEAVELMEEYLESDTGDALIEVD 111
           S++H   E  T  LDD+T   H  ++ +L     + R  A    EE+L+  +    +E D
Sbjct: 358 SAYHTIGEIETEVLDDLT---HSIVNKILAEPTKVLRQAAELGNEEFLDVVSRVFCLEKD 414

Query: 112 KTKGAHCRFSYLEKIFKECLKEQRDLAAEYGVTEE 146
           K K      +  E+I   C KEQ  +  +  V E+
Sbjct: 415 KAKLEKINQAKFEQIEPGCAKEQAAVKEQTAVKEQ 449


>NORV_VIBVU (Q8D4F8) Anaerobic nitric oxide reductase
           flavorubredoxin (FlRd) (FlavoRb)
          Length = 494

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 52  SSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHGFISRDEAVELMEEYL 99
           S+   PF  +           ++P+D +  SHG + R+   +++E+YL
Sbjct: 196 SNILTPFSALVTAKIQEVLSFNLPVDMIATSHGIVWRENPTQIIEQYL 243


>P3K1_SOYBN (P42347) Phosphatidylinositol 3-kinase, root isoform (EC
           2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K)
           (SPI3K-5)
          Length = 814

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 21/54 (38%), Positives = 31/54 (56%), Gaps = 3/54 (5%)

Query: 147 VERLQDQTVRIYLLYLVGITIF--TDKSQWAVDVVYLKFFRNIDLVSSFSWGVA 198
           +ER  D+ ++ YLL LV    F  +DKS+ +  +V  +  RNI+L S   W VA
Sbjct: 375 LERADDEELQCYLLQLVQALRFERSDKSRLSHFLVQ-RALRNIELASFLRWYVA 427


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.326    0.140    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,224,815
Number of Sequences: 164201
Number of extensions: 1579319
Number of successful extensions: 4637
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4635
Number of HSP's gapped (non-prelim): 4
length of query: 311
length of database: 59,974,054
effective HSP length: 110
effective length of query: 201
effective length of database: 41,911,944
effective search space: 8424300744
effective search space used: 8424300744
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 66 (30.0 bits)


Medicago: description of AC144893.1