
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144893.1 + phase: 0 /pseudo
(311 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PMT2_YEAST (P31382) Dolichyl-phosphate-mannose--protein mannosyl... 36 0.11
HEM1_METAC (Q8TT60) Glutamyl-tRNA reductase (EC 1.2.1.-) (GluTR) 32 2.6
NORV_VIBVU (Q8D4F8) Anaerobic nitric oxide reductase flavorubred... 30 5.9
P3K1_SOYBN (P42347) Phosphatidylinositol 3-kinase, root isoform ... 30 7.7
>PMT2_YEAST (P31382) Dolichyl-phosphate-mannose--protein
mannosyltransferase 2 (EC 2.4.1.109)
Length = 759
Score = 36.2 bits (82), Expect = 0.11
Identities = 20/78 (25%), Positives = 33/78 (41%), Gaps = 6/78 (7%)
Query: 169 TDKSQWAVDVVYLKFFRNIDLVSSFSWGVAALAHLY*ELNNAARWNCSQMAGYLTLFVYG 228
T S WA V L F + ++ W Y +L N + WN M G+ L +G
Sbjct: 607 TPASTWASSVAVLAFMATV-VILLIRW-----QRQYVDLRNPSNWNVFLMGGFYPLLAWG 660
Query: 229 LYIYTWLSLVQAWVFHHF 246
L+ ++ + + HH+
Sbjct: 661 LHYMPFVIMSRVTYVHHY 678
>HEM1_METAC (Q8TT60) Glutamyl-tRNA reductase (EC 1.2.1.-) (GluTR)
Length = 460
Score = 31.6 bits (70), Expect = 2.6
Identities = 27/95 (28%), Positives = 43/95 (44%), Gaps = 3/95 (3%)
Query: 52 SSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHGFISRDEAVELMEEYLESDTGDALIEVD 111
S++H E T LDD+T H ++ +L + R A EE+L+ + +E D
Sbjct: 358 SAYHTIGEIETEVLDDLT---HSIVNKILAEPTKVLRQAAELGNEEFLDVVSRVFCLEKD 414
Query: 112 KTKGAHCRFSYLEKIFKECLKEQRDLAAEYGVTEE 146
K K + E+I C KEQ + + V E+
Sbjct: 415 KAKLEKINQAKFEQIEPGCAKEQAAVKEQTAVKEQ 449
>NORV_VIBVU (Q8D4F8) Anaerobic nitric oxide reductase
flavorubredoxin (FlRd) (FlavoRb)
Length = 494
Score = 30.4 bits (67), Expect = 5.9
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 52 SSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHGFISRDEAVELMEEYL 99
S+ PF + ++P+D + SHG + R+ +++E+YL
Sbjct: 196 SNILTPFSALVTAKIQEVLSFNLPVDMIATSHGIVWRENPTQIIEQYL 243
>P3K1_SOYBN (P42347) Phosphatidylinositol 3-kinase, root isoform (EC
2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K)
(SPI3K-5)
Length = 814
Score = 30.0 bits (66), Expect = 7.7
Identities = 21/54 (38%), Positives = 31/54 (56%), Gaps = 3/54 (5%)
Query: 147 VERLQDQTVRIYLLYLVGITIF--TDKSQWAVDVVYLKFFRNIDLVSSFSWGVA 198
+ER D+ ++ YLL LV F +DKS+ + +V + RNI+L S W VA
Sbjct: 375 LERADDEELQCYLLQLVQALRFERSDKSRLSHFLVQ-RALRNIELASFLRWYVA 427
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.326 0.140 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,224,815
Number of Sequences: 164201
Number of extensions: 1579319
Number of successful extensions: 4637
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4635
Number of HSP's gapped (non-prelim): 4
length of query: 311
length of database: 59,974,054
effective HSP length: 110
effective length of query: 201
effective length of database: 41,911,944
effective search space: 8424300744
effective search space used: 8424300744
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 66 (30.0 bits)
Medicago: description of AC144893.1