BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144730.8 - phase: 0
(840 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TRA6_STAAU (P19775) Transposase for insertion sequence element I... 42 0.007
TRA6_ENTFA (P59787) Transposase for insertion sequence element I... 42 0.007
STSY_RAUSE (P68175) Strictosidine synthase precursor (EC 4.3.3.2) 38 0.13
STSY_RAUMA (P68174) Strictosidine synthase precursor (EC 4.3.3.2... 38 0.13
SMX6_SCHMA (Q26605) Homeobox protein SMOX-6 (Fragment) 36 0.48
YP52_BORBU (Q44845) Putative outer membrane protein BBA52 35 0.83
PIG1_DROME (P26023) Pre-intermoult gene-1 protein precursor (Gla... 35 0.83
YIH9_YEAST (P40507) Hypothetical 41.6 kDa protein in SDS3-THS1 i... 35 1.1
YGP0_YEAST (P53115) Hypothetical 171.5 kDa helicase in NUT1-ARO2... 35 1.1
STSY_CATRO (P18417) Strictosidine synthase precursor (EC 4.3.3.2) 35 1.1
VNS1_IACKG (P30909) Nonstructural protein NS1 34 1.4
TYY1_MOUSE (Q00899) Transcriptional repressor protein YY1 (Yin a... 34 1.4
ORC1_CANAL (O74270) Origin recognition complex subunit 1 34 1.4
FALZ_HUMAN (Q12830) Fetal Alzheimer antigen (Fetal Alz-50-reacti... 34 1.4
DAXX_RAT (Q8VIB2) Death domain-associated protein 6 (Daxx) 34 1.4
ZSW1_HUMAN (Q9BR11) Zinc finger SWIM domain containing protein 1 34 1.8
SEN1_YEAST (Q00416) Helicase SEN1 (EC 3.6.1.-) (tRNA-splicing en... 34 1.8
ZSW1_MOUSE (Q9CWV7) Zinc finger SWIM domain containing protein 1 33 2.4
YEMA_DROME (P25992) Yemanuclein-alpha 33 2.4
TRA5_LACLA (P35881) Transposase for insertion sequence element I... 33 3.1
>TRA6_STAAU (P19775) Transposase for insertion sequence element
IS256 in transposon Tn4001
Length = 390
Score = 42.0 bits (97), Expect = 0.007
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 453 PFVGVDGCHLKTRYGGQLL-----IAVGRDPNDQYFPLAFGVVETECKETWKWFTQLLME 507
P++ D ++K R ++L IA+G + + F + E +ETW F + L E
Sbjct: 162 PYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKE 221
Query: 508 DIGEDKRYVFISDQQKGLLSVFDEMFDSIDHRLC----LRHLYANFKKKFGGGSQIRDLM 563
G + ISD KGL+S + F ++ + C LR+++ KK R+ +
Sbjct: 222 R-GLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKK--NSKSFREAV 278
Query: 564 MGATKAT 570
G K T
Sbjct: 279 KGIFKFT 285
>TRA6_ENTFA (P59787) Transposase for insertion sequence element
IS256 in transposon Tn4001
Length = 390
Score = 42.0 bits (97), Expect = 0.007
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 453 PFVGVDGCHLKTRYGGQLL-----IAVGRDPNDQYFPLAFGVVETECKETWKWFTQLLME 507
P++ D ++K R ++L IA+G + + F + E +ETW F + L E
Sbjct: 162 PYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKE 221
Query: 508 DIGEDKRYVFISDQQKGLLSVFDEMFDSIDHRLC----LRHLYANFKKKFGGGSQIRDLM 563
G + ISD KGL+S + F ++ + C LR+++ KK R+ +
Sbjct: 222 R-GLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKK--NSKSFREAV 278
Query: 564 MGATKAT 570
G K T
Sbjct: 279 KGIFKFT 285
>STSY_RAUSE (P68175) Strictosidine synthase precursor (EC 4.3.3.2)
Length = 344
Score = 37.7 bits (86), Expect = 0.13
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 87 VANKVDAHIFVEHNVLDISVKVDVPSFFDLDVGYDEEDV--MVSTDDDSGKFVGFDDSED 144
+A VD F + + + + F D+ YD+ V ++ T D +G+ + +D S
Sbjct: 138 LATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 197
Query: 145 ESTTALEDGFEDVEVEAPANGNNRVTVNNKTLRIKKCGSKTPKKKSPKKNNSGRMNVIAP 204
E+T L++ E A+ + + + +I K + PKK + + + + P
Sbjct: 198 ETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEV----LVKIPNP 253
Query: 205 VSLLKNGKGKYVV--DEEIDGDYLSEELGSSDPDDSNDDTIKYDQF 248
++ +N G + V EE+DG+ G DP IK+D+F
Sbjct: 254 GNIKRNADGHFWVSSSEELDGNM----HGRVDPKG-----IKFDEF 290
>STSY_RAUMA (P68174) Strictosidine synthase precursor (EC 4.3.3.2)
(Fragment)
Length = 342
Score = 37.7 bits (86), Expect = 0.13
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 87 VANKVDAHIFVEHNVLDISVKVDVPSFFDLDVGYDEEDV--MVSTDDDSGKFVGFDDSED 144
+A VD F + + + + F D+ YD+ V ++ T D +G+ + +D S
Sbjct: 136 LATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 195
Query: 145 ESTTALEDGFEDVEVEAPANGNNRVTVNNKTLRIKKCGSKTPKKKSPKKNNSGRMNVIAP 204
E+T L++ E A+ + + + +I K + PKK + + + + P
Sbjct: 196 ETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEV----LVKIPNP 251
Query: 205 VSLLKNGKGKYVV--DEEIDGDYLSEELGSSDPDDSNDDTIKYDQF 248
++ +N G + V EE+DG+ G DP IK+D+F
Sbjct: 252 GNIKRNADGHFWVSSSEELDGNM----HGRVDPKG-----IKFDEF 288
>SMX6_SCHMA (Q26605) Homeobox protein SMOX-6 (Fragment)
Length = 204
Score = 35.8 bits (81), Expect = 0.48
Identities = 36/151 (23%), Positives = 63/151 (40%), Gaps = 19/151 (12%)
Query: 121 DEEDVMVSTDDDSGKFVGFDDSEDESTTALEDGFEDVEVEAPANGNNRVTVNNKTLRIKK 180
D+ED DD+ DD ED+ ++ ++V +E+ N + N+TL
Sbjct: 37 DDEDSDGDGDDND------DDEEDDELVKRDESEDNVLIESIHQNQNNLKFENETL---- 86
Query: 181 CGSKTPKKKSPKKNNSGRMNVIAPVSLLKNGK--GKYVVDEEIDGDYLSEELGSSDPDDS 238
SK +S K+ N ++ P S +N + + ID L+ LGS +D
Sbjct: 87 --SKHSISESSKRINVNTFSIQNPYSFTENKQFTPSKECQQYIDHSKLNNPLGSQIINDL 144
Query: 239 ND-----DTIKYDQFRMPQLNKDFKFKIGME 264
++ D KY + Q++ + G+E
Sbjct: 145 SEKSKISDYTKYAWNSLKQIHDNLNIDNGIE 175
>YP52_BORBU (Q44845) Putative outer membrane protein BBA52
Length = 281
Score = 35.0 bits (79), Expect = 0.83
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 32/128 (25%)
Query: 150 LEDGFEDVEVEAPANGNN---RVTVNNKTLRI------KKCGSKTPKKKSPKKNNSG--- 197
LE+ F+ ++ +G N R++ N L+ K GSK K P K+ G
Sbjct: 142 LENYFQSNRLKNVKSGENIKKRISDNQSKLKSLRSKPNKSVGSKFSKNSRPSKSPQGVKK 201
Query: 198 --RMNVIAPVSLLKNGKGKYVVDE------EIDGDYLSEELGSSDPDD----------SN 239
+ ++ L NG +D+ E++ +Y +EL S DPDD S
Sbjct: 202 CNKRRILDKYDL--NGAESEFLDDPSQESDELEREYQDDELESEDPDDGEREYQDDRESR 259
Query: 240 DDTIKYDQ 247
DDT DQ
Sbjct: 260 DDTFNEDQ 267
>PIG1_DROME (P26023) Pre-intermoult gene-1 protein precursor (Gland
specific protein)
Length = 187
Score = 35.0 bits (79), Expect = 0.83
Identities = 26/75 (34%), Positives = 30/75 (39%), Gaps = 6/75 (8%)
Query: 128 STDDDSGKFVGFDDSEDESTTALEDGFEDVEVEAPA--NGNNRVTVNNKTLRIKKCGSKT 185
S+DD SG DD D+ T + D D AP NR NN KK S
Sbjct: 68 SSDDASGSSSDVDDGSDDDTDSGSDTDYDTPTTAPVVKKRANRKKANNN----KKRASNN 123
Query: 186 PKKKSPKKNNSGRMN 200
KK + NN R N
Sbjct: 124 RKKANNNNNNKKRAN 138
>YIH9_YEAST (P40507) Hypothetical 41.6 kDa protein in SDS3-THS1
intergenic region
Length = 360
Score = 34.7 bits (78), Expect = 1.1
Identities = 17/57 (29%), Positives = 27/57 (46%), Gaps = 3/57 (5%)
Query: 770 PEVEAPELLPPNYKNGPGRPRKLRIREFDENGSRMRRQGVAYRCTKCDQFGHNQRRC 826
P +E + P + G+ R I ++D NG+ M + +C C Q GH +R C
Sbjct: 36 PSIEDVDANPEELRTLRGQGRYFGITDYDSNGAIMEAEP---KCNNCSQRGHLKRNC 89
>YGP0_YEAST (P53115) Hypothetical 171.5 kDa helicase in NUT1-ARO2
intergenic region
Length = 1489
Score = 34.7 bits (78), Expect = 1.1
Identities = 27/111 (24%), Positives = 50/111 (44%), Gaps = 14/111 (12%)
Query: 140 DDSEDESTTALEDGFEDVEVEAPANGNNRVTVNNKTLRIKKCGSKTPKKKSPK------- 192
D+ E++ LEDG ED+E + + G + N K++R G + +KK
Sbjct: 142 DEDEEDDEDELEDGEEDMEEDEASTGRH---TNGKSMRGN--GIQKSRKKDAAAAAAIGK 196
Query: 193 --KNNSGRMNVIAPVSLLKNGKGKYVVDEEIDGDYLSEELGSSDPDDSNDD 241
K++ + + V+ +N G DE+ D D + +D ++ ND+
Sbjct: 197 AIKDDQTHADTVVTVNGDENEDGNNGEDEDNDNDNENNNDNDNDNENENDN 247
>STSY_CATRO (P18417) Strictosidine synthase precursor (EC 4.3.3.2)
Length = 352
Score = 34.7 bits (78), Expect = 1.1
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 109 DVPSFFDLDVGYDEEDVMVSTDDDSGKFVGFDDSEDESTTALEDGFEDVEVEAPANGNNR 168
DV S D D E++M +T D +G+ + +D S E+T L++ E A+G+
Sbjct: 170 DVSSIHD-DSPEGVEEIM-NTSDRTGRLMKYDPSTKETTLLLKELHVPGGAEISADGSFV 227
Query: 169 VTVNNKTLRIKKCGSKTPKKKSPKKNNSGRMNVIAPVSLLKNGKGKYVV--DEEIDG 223
V + RI K + PKK S + + + P ++ +N G + V EE+DG
Sbjct: 228 VVAEFLSNRIVKYWLEGPKKGSAE----FLVTIPNPGNIKRNSDGHFWVSSSEELDG 280
>VNS1_IACKG (P30909) Nonstructural protein NS1
Length = 230
Score = 34.3 bits (77), Expect = 1.4
Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 263 MEFNTLVEFKEAIIEWNVLNGYQIKVLKNESYRVRVECRDQCGYKVLCSKVGDRRTFQIK 322
M+ NT+ F+ W++ ++ + + + R+ RDQ K S +G ++
Sbjct: 1 MDSNTITSFQVDCYLWHIRKLLSMRDMCDAPFDDRLR-RDQKALKGRGSTLG--LDLRVA 57
Query: 323 TLEGPHTCAPVLENKSANSRWVAKKAVPKMQVTKKMSVQEVFNE-------MAVNYGVGI 375
T+EG +LE+++ + +A + P + MS++E+ E V G+ +
Sbjct: 58 TMEGKKIVEDILESETDENLKIAIASSPAPRYIMDMSIEEISREWYMLMPRQKVTGGLMV 117
Query: 376 TMDRAWRARKI 386
MD+A ++I
Sbjct: 118 KMDQAIMGKRI 128
>TYY1_MOUSE (Q00899) Transcriptional repressor protein YY1 (Yin and
yang 1) (YY-1) (Delta transcription factor) (NF-E1)
(UCR-motif DNA-binding protein)
Length = 414
Score = 34.3 bits (77), Expect = 1.4
Identities = 40/149 (26%), Positives = 65/149 (42%), Gaps = 25/149 (16%)
Query: 118 VGYDEEDVMVSTDDDSGKFVGFDDSEDESTTALEDGFED---VEVEAPANGNNR------ 168
V + +E ++V T ++ VG DDS+ EDGFED + V APA G++
Sbjct: 99 VHHHQEVILVQTREE---VVGGDDSDG---LRAEDGFEDQILIPVPAPAGGDDDYIEQTL 152
Query: 169 VTV----------NNKTLRIKKCGSKTPKKKSPKKNNSGRMNVIAPVSLLKNGKGKYVVD 218
VTV ++ R+KK G K KKS +G K + K V
Sbjct: 153 VTVAAAGKSGGGASSGGGRVKKGGGKKSGKKSYLGGGAGAAGGGGADPGNKKWEQKQVQI 212
Query: 219 EEIDGDYLSEELGSSDPDDSNDDTIKYDQ 247
+ ++G++ S + D + +T+ +Q
Sbjct: 213 KTLEGEFSVTMWSSDEKKDIDHETVVEEQ 241
>ORC1_CANAL (O74270) Origin recognition complex subunit 1
Length = 805
Score = 34.3 bits (77), Expect = 1.4
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 122 EEDVMVSTDDDSGKFVGFDDSEDESTTALEDGFEDVEVEAPANG---NNRVTVNNKTL-- 176
+ DV+ ++ + ++++ED + +ALE E++ E+ + + + + NK L
Sbjct: 260 DNDVLSDQSEEKQEESDYNEAED-ANSALESDEENISQESEDSEVEYSTKKKLKNKKLSR 318
Query: 177 RIKKCGSKTPKKKSPKKNNSGRMNVIAPVSLLKNGK 212
R K + +PK+K KK+ +V+ P +K GK
Sbjct: 319 RSKAAATPSPKRKLQKKDIEDIYSVVTPTKRMKLGK 354
>FALZ_HUMAN (Q12830) Fetal Alzheimer antigen (Fetal Alz-50-reactive
clone 1)
Length = 810
Score = 34.3 bits (77), Expect = 1.4
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 121 DEEDVMVSTDDDSGKFVGFDDSEDESTTALEDGFEDVEVEAPANGNNRVTVNNKTLRIKK 180
DEED M DDDS +D +D+++ E F + G + V+ I +
Sbjct: 22 DEEDEMEEDDDDSDYPEEMEDDDDDASYCTESSFRSHSTYSSTPGRRKPRVHRPRSPILE 81
Query: 181 CGSKTPKKKSPKKN------NSGRMNVIAPVSLLKN 210
P + PK + N MNVIA +L+N
Sbjct: 82 -EKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRN 116
>DAXX_RAT (Q8VIB2) Death domain-associated protein 6 (Daxx)
Length = 731
Score = 34.3 bits (77), Expect = 1.4
Identities = 29/113 (25%), Positives = 48/113 (41%), Gaps = 3/113 (2%)
Query: 121 DEEDVMVSTDDDSGKFVGFDDS---EDESTTALEDGFEDVEVEAPANGNNRVTVNNKTLR 177
DEED S D++ + +++ EDE L++ +D E E N +++ + +
Sbjct: 434 DEEDDEESDDEEEEEEEEEEEATEDEDEDLEQLQEDQDDEEEEEGDNEDDKSPASPSPIF 493
Query: 178 IKKCGSKTPKKKSPKKNNSGRMNVIAPVSLLKNGKGKYVVDEEIDGDYLSEEL 230
+K S K P++ R P S L+ G D E G+ L E L
Sbjct: 494 RRKEFSNPQKGSGPQEEQQERGLTGTPASPLEASPGLPSTDAESSGEQLQERL 546
>ZSW1_HUMAN (Q9BR11) Zinc finger SWIM domain containing protein 1
Length = 456
Score = 33.9 bits (76), Expect = 1.8
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 712 SCSCNFWEIVGIPCRHVVSALGKRKQ--RPEM 741
SCSC F + +PCRH+++ L R+Q +P+M
Sbjct: 352 SCSCYFNQAFHLPCRHILAMLSARRQVLQPDM 383
>SEN1_YEAST (Q00416) Helicase SEN1 (EC 3.6.1.-) (tRNA-splicing
endonuclease positive effector)
Length = 2231
Score = 33.9 bits (76), Expect = 1.8
Identities = 22/84 (26%), Positives = 42/84 (49%), Gaps = 11/84 (13%)
Query: 601 WCK-HAFTFYSKCDVLMNNISESFNVTILSARDQPIISMAEWIRHYLMRRMTTSATKLQK 659
W K FTF+S D++ N +SF + ++ +D PI+ + ++T S T L
Sbjct: 375 WSKIEPFTFHSILDIIFNR--DSFPIKLIKIQDNPIVEHQTEVYF----QLTGSVTDLLS 428
Query: 660 W----QHNVMPMPRKRLDKEITLA 679
W H + P R ++ +++++A
Sbjct: 429 WTLPFYHALSPSKRIQMVRKVSMA 452
>ZSW1_MOUSE (Q9CWV7) Zinc finger SWIM domain containing protein 1
Length = 455
Score = 33.5 bits (75), Expect = 2.4
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 712 SCSCNFWEIVGIPCRHVVSALGKRKQ--RPEM 741
SCSC F + +PCRH+++ L R+Q +P+M
Sbjct: 351 SCSCYFNQAFHLPCRHILAMLSARQQVLQPDM 382
>YEMA_DROME (P25992) Yemanuclein-alpha
Length = 1002
Score = 33.5 bits (75), Expect = 2.4
Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 9/146 (6%)
Query: 115 DLDVGYDEEDVMVSTDDDSGKFVGFDDSEDESTTALEDGFEDVEVEAPANGNNRVTVNNK 174
D+ +GYDE D + + +D+ E LE GF + A +T +
Sbjct: 137 DIGMGYDESDSFIDNTE------AYDEIIPEEAETLEGGFY---INCGALEFKNLTKKSY 187
Query: 175 TLRIKKCGSKTPKKKSPKKNNSGRMNVIAPVSLLKNGKGKYVVDEEIDGDYLSEELGSSD 234
T R + + ++S + + +N G D+E D + SEE SD
Sbjct: 188 TTRTDAIIKMPERSRKRMVSSSSESSSSSSGDDDENDDGNNEEDDESDSEDDSEENDESD 247
Query: 235 PDDSNDDTIKYDQFRMPQLNKDFKFK 260
+D ++ D+ K+K
Sbjct: 248 SEDDSESESLEDEDSAATAKSSSKYK 273
>TRA5_LACLA (P35881) Transposase for insertion sequence element
IS905
Length = 391
Score = 33.1 bits (74), Expect = 3.1
Identities = 39/182 (21%), Positives = 68/182 (36%), Gaps = 14/182 (7%)
Query: 457 VDGCHLKTRYGGQ----LLIAVGRDPNDQYFPLAFGVVETECKETWKWFTQLLMEDIGED 512
+DG +L R G + IA+G P Q L + + E +W L G
Sbjct: 162 LDGTYLPLRRGTVSKECIHIALGITPEGQKAVLGYEIAPNENNASWSTLLDKLQNQ-GIQ 220
Query: 513 KRYVFISDQQKGLLSVFDEMFDSIDHRLCLRHLYANFKKKFGGGSQIRDLMMGATKATYN 572
+ + ++D KGL + + + + CL H+ N K R +++ K Y
Sbjct: 221 QVSLVVTDGFKGLEQIISQAYPLAKQQRCLIHISRNLASKVKRAD--RAVILEQFKTIYR 278
Query: 573 QGWLEKMNELKKIDLGAW--EWLMAVEPKKWCKHAFTFYS-----KCDVLMNNISESFNV 625
LE + + + W ++ +E + + TFY + N+ ES N
Sbjct: 279 AENLEMAVQALENFIAEWKPKYRKVMESLENTDNLLTFYQFPYQIWHSIYSTNLIESLNK 338
Query: 626 TI 627
I
Sbjct: 339 EI 340
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,297,234
Number of Sequences: 164201
Number of extensions: 4676357
Number of successful extensions: 11055
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 11012
Number of HSP's gapped (non-prelim): 66
length of query: 840
length of database: 59,974,054
effective HSP length: 119
effective length of query: 721
effective length of database: 40,434,135
effective search space: 29153011335
effective search space used: 29153011335
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 70 (31.6 bits)
Medicago: description of AC144730.8