Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144728.11 + phase: 0 /pseudo
         (438 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

NUIC_PLEBO (Q00236) NAD(P)H-quinone oxidoreductase subunit I (EC...    31  5.5
PLB5_SCHPO (Q9Y7N6) Putative lysophospholipase C1450.09c precurs...    30  9.4

>NUIC_PLEBO (Q00236) NAD(P)H-quinone oxidoreductase subunit I (EC
           1.6.5.-) (NADH dehydrogenase I, subunit I) (NDH-1,
           subunit I) (frxB protein)
          Length = 194

 Score = 31.2 bits (69), Expect = 5.5
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 23/98 (23%)

Query: 257 FRMIVLFGKWRGTI---FIRYVALTVFVLKSWLMFPTSIVRVIGETFGALRSPRKLN--- 310
           +  ++L  ++RG I   F + +A  V V    +  P     V+   F      +KLN   
Sbjct: 44  YEKLILSERFRGRIHFEFDKCIACEVCVRVCPINLP-----VVDWEFNKETKKKKLNHYS 98

Query: 311 T*FGVCV--GGCLPTRVLLQDKGVSCPTNCASCSHEYE 346
             FGVC+  G C+            CPTNC S + EYE
Sbjct: 99  IDFGVCIFCGNCVEY----------CPTNCLSMTEEYE 126


>PLB5_SCHPO (Q9Y7N6) Putative lysophospholipase C1450.09c precursor
           (EC 3.1.1.5) (Phospholipase B)
          Length = 633

 Score = 30.4 bits (67), Expect = 9.4
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 313 FGVCVGGCLPTRVLLQDKGVSCPTNCASCSHEY 345
           F VCV   L  R L + K +S P+ CASC ++Y
Sbjct: 569 FAVCVACALVQRSL-ERKNMSTPSQCASCFNQY 600


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.359    0.163    0.562 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,369,442
Number of Sequences: 164201
Number of extensions: 1383955
Number of successful extensions: 5206
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5205
Number of HSP's gapped (non-prelim): 3
length of query: 438
length of database: 59,974,054
effective HSP length: 113
effective length of query: 325
effective length of database: 41,419,341
effective search space: 13461285825
effective search space used: 13461285825
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 67 (30.4 bits)


Medicago: description of AC144728.11