
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144728.11 + phase: 0 /pseudo
(438 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NUIC_PLEBO (Q00236) NAD(P)H-quinone oxidoreductase subunit I (EC... 31 5.5
PLB5_SCHPO (Q9Y7N6) Putative lysophospholipase C1450.09c precurs... 30 9.4
>NUIC_PLEBO (Q00236) NAD(P)H-quinone oxidoreductase subunit I (EC
1.6.5.-) (NADH dehydrogenase I, subunit I) (NDH-1,
subunit I) (frxB protein)
Length = 194
Score = 31.2 bits (69), Expect = 5.5
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 23/98 (23%)
Query: 257 FRMIVLFGKWRGTI---FIRYVALTVFVLKSWLMFPTSIVRVIGETFGALRSPRKLN--- 310
+ ++L ++RG I F + +A V V + P V+ F +KLN
Sbjct: 44 YEKLILSERFRGRIHFEFDKCIACEVCVRVCPINLP-----VVDWEFNKETKKKKLNHYS 98
Query: 311 T*FGVCV--GGCLPTRVLLQDKGVSCPTNCASCSHEYE 346
FGVC+ G C+ CPTNC S + EYE
Sbjct: 99 IDFGVCIFCGNCVEY----------CPTNCLSMTEEYE 126
>PLB5_SCHPO (Q9Y7N6) Putative lysophospholipase C1450.09c precursor
(EC 3.1.1.5) (Phospholipase B)
Length = 633
Score = 30.4 bits (67), Expect = 9.4
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 313 FGVCVGGCLPTRVLLQDKGVSCPTNCASCSHEY 345
F VCV L R L + K +S P+ CASC ++Y
Sbjct: 569 FAVCVACALVQRSL-ERKNMSTPSQCASCFNQY 600
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.359 0.163 0.562
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,369,442
Number of Sequences: 164201
Number of extensions: 1383955
Number of successful extensions: 5206
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5205
Number of HSP's gapped (non-prelim): 3
length of query: 438
length of database: 59,974,054
effective HSP length: 113
effective length of query: 325
effective length of database: 41,419,341
effective search space: 13461285825
effective search space used: 13461285825
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 67 (30.4 bits)
Medicago: description of AC144728.11