BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144728.10 + phase: 0 /pseudo
(1006 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SECA_PEA (Q41062) Preprotein translocase secA subunit, chloropla... 352 3e-96
SECA_ARATH (Q9SYI0) Preprotein translocase secA subunit, chlorop... 265 5e-70
SECA_SPIOL (Q36795) Preprotein translocase secA subunit, chlorop... 240 2e-62
SECA_SYNY3 (Q55709) Preprotein translocase secA subunit 180 2e-44
SECA_SYNP7 (Q55357) Preprotein translocase secA subunit 177 1e-43
SECA_PORPU (P51381) Preprotein translocase secA subunit 174 8e-43
SECA_CAUCR (P38380) Preprotein translocase secA subunit 174 8e-43
SECA_GUITH (O78441) Preprotein translocase secA subunit 172 5e-42
SECA_MYCSM (P71533) Preprotein translocase secA subunit 169 3e-41
SECA_RHOCA (P52966) Preprotein translocase secA subunit 169 4e-41
SECA_ECOLI (P10408) Preprotein translocase secA subunit 169 4e-41
SEA1_MYCLE (P57996) Preprotein translocase secA 1 subunit 166 2e-40
SECA_ODOSI (P49649) Preprotein translocase secA subunit 162 5e-39
SECA_LISMO (P47847) Preprotein translocase secA subunit 159 3e-38
SECA_LISIN (Q927Y3) Preprotein translocase secA subunit 159 3e-38
SECA_BACSU (P28366) Preprotein translocase secA subunit 159 4e-38
SECA_STRCO (P55021) Preprotein translocase secA subunit 159 5e-38
SEA1_MYCTU (O05885) Preprotein translocase secA 1 subunit 159 5e-38
SECA_RICPR (Q9ZCX7) Preprotein translocase secA subunit 158 6e-38
SECA_STRGR (P95759) Preprotein translocase secA subunit 158 8e-38
>SECA_PEA (Q41062) Preprotein translocase secA subunit, chloroplast
precursor
Length = 1011
Score = 352 bits (903), Expect = 3e-96
Identities = 188/218 (86%), Positives = 192/218 (87%), Gaps = 3/218 (1%)
Query: 1 MAASSLCSSFTSTTSHSQHRLHHRKTLNLPGSSFLSREFHLNSASVSKTRRSRSRRSGSV 60
MA SSLCSSFTS T + H HRKTL LPGS FL R+FHLNS SVSKTRR R+R+SG V
Sbjct: 1 MATSSLCSSFTSQTCNP-HSRPHRKTLTLPGSVFLCRQFHLNSPSVSKTRRIRTRQSGPV 59
Query: 61 AVASLGGLLGGIFKGNDTGEATRKQYAATVNVINGLEANISKLSDSELRDKTFELRERAQ 120
A SLGGLLGGIFKG DTGEATRKQYAA VN INGLE IS LSDSELRD TF RERAQ
Sbjct: 60 A--SLGGLLGGIFKGTDTGEATRKQYAAIVNTINGLEPKISALSDSELRDMTFASRERAQ 117
Query: 121 KRESLDSLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILP 180
K ESLDSLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILP
Sbjct: 118 KGESLDSLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILP 177
Query: 181 AYLNALVGKGVHVVTVNDYLARRDCEWVGQVPRFLGMK 218
AYLNALVGKGVHVVTVNDYLARRDCEWVGQVPRFLGMK
Sbjct: 178 AYLNALVGKGVHVVTVNDYLARRDCEWVGQVPRFLGMK 215
>SECA_ARATH (Q9SYI0) Preprotein translocase secA subunit,
chloroplast precursor
Length = 1021
Score = 265 bits (677), Expect = 5e-70
Identities = 143/196 (72%), Positives = 160/196 (80%), Gaps = 2/196 (1%)
Query: 24 RKTLNLPGSSFLSREFHLNSASVSKTRRSRSRRSGSVAV-ASLGGLLGGIFKGNDTGEAT 82
R+ L SSF +F N+ + + S R S +V ASLGGLL GIFKG+D GE+T
Sbjct: 33 RQNRLLSSSSFWGTKFG-NTVKLGVSGCSSCSRKRSTSVNASLGGLLSGIFKGSDNGEST 91
Query: 83 RKQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVVREASKR 142
R+QYA+ V +N LE IS LSDSELR++T L++RAQK ES+DSLLPEAFAVVREASKR
Sbjct: 92 RQQYASIVASVNRLETEISALSDSELRERTDALKQRAQKGESMDSLLPEAFAVVREASKR 151
Query: 143 VLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYLAR 202
VLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNAL GKGVHVVTVNDYLAR
Sbjct: 152 VLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALSGKGVHVVTVNDYLAR 211
Query: 203 RDCEWVGQVPRFLGMK 218
RDCEWVGQVPRFLG+K
Sbjct: 212 RDCEWVGQVPRFLGLK 227
>SECA_SPIOL (Q36795) Preprotein translocase secA subunit,
chloroplast precursor
Length = 1036
Score = 240 bits (612), Expect = 2e-62
Identities = 129/176 (73%), Positives = 144/176 (81%), Gaps = 8/176 (4%)
Query: 51 RSRSRRSGS---VAVASLGGLL--GGI---FKGNDTGEATRKQYAATVNVINGLEANISK 102
R R R+ G V ++ GGLL G + FKG D E+T++QYA+TV +IN LE IS
Sbjct: 62 RGRERKIGELMQVRASAQGGLLNLGNLLFNFKGGDPAESTKQQYASTVTLINQLEPQISS 121
Query: 103 LSDSELRDKTFELRERAQKRESLDSLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKG 162
L+DS+L D+T LR+RA ESLDS+LPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKG
Sbjct: 122 LTDSQLTDRTSLLRQRALSGESLDSILPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKG 181
Query: 163 EIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYLARRDCEWVGQVPRFLGMK 218
EIAEMRTGEGKTLVAILPAYLNAL GKGVHVVTVNDYLARRDCEWVGQV RFLG+K
Sbjct: 182 EIAEMRTGEGKTLVAILPAYLNALTGKGVHVVTVNDYLARRDCEWVGQVARFLGLK 237
>SECA_SYNY3 (Q55709) Preprotein translocase secA subunit
Length = 932
Score = 180 bits (456), Expect = 2e-44
Identities = 92/141 (65%), Positives = 109/141 (77%), Gaps = 7/141 (4%)
Query: 84 KQYAATVNVINGLEANISKLSDSELRDKTFELRER-------AQKRESLDSLLPEAFAVV 136
K++ V +N E +I KLSD EL+ KT E RE A+ E LD +LPEAFAVV
Sbjct: 15 KKFQPYVAEVNLYEEDIEKLSDDELKYKTVEFREALDKARSDAETEEILDEILPEAFAVV 74
Query: 137 REASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTV 196
REA KRVLG+R FDVQL+GG++LHKG+IAEM+TGEGKTLVA LP+YLN L GKGVHVVTV
Sbjct: 75 REAGKRVLGMRHFDVQLLGGIILHKGQIAEMKTGEGKTLVATLPSYLNGLTGKGVHVVTV 134
Query: 197 NDYLARRDCEWVGQVPRFLGM 217
NDYLARRD EW+GQ+ RFLG+
Sbjct: 135 NDYLARRDAEWMGQIHRFLGL 155
>SECA_SYNP7 (Q55357) Preprotein translocase secA subunit
Length = 948
Score = 177 bits (449), Expect = 1e-43
Identities = 94/142 (66%), Positives = 108/142 (75%), Gaps = 8/142 (5%)
Query: 84 KQYAATVNVINGLEANISKLSDSELRDKTFELRERAQK--------RESLDSLLPEAFAV 135
K+Y V IN LE +I LSD +L KT E R++ K +E L LLPEAFAV
Sbjct: 15 KKYKPLVTEINLLEEDIEPLSDKDLIAKTAEFRQKLDKVSHSPAAEKELLAELLPEAFAV 74
Query: 136 VREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVT 195
+REASKRVLGLR FDVQ+IGGM+LH G+IAEM+TGEGKTLVA LP+YLNAL GKG HVVT
Sbjct: 75 MREASKRVLGLRHFDVQMIGGMILHDGQIAEMKTGEGKTLVATLPSYLNALSGKGAHVVT 134
Query: 196 VNDYLARRDCEWVGQVPRFLGM 217
VNDYLARRD EW+GQV RFLG+
Sbjct: 135 VNDYLARRDAEWMGQVHRFLGL 156
>SECA_PORPU (P51381) Preprotein translocase secA subunit
Length = 884
Score = 174 bits (442), Expect = 8e-43
Identities = 88/132 (66%), Positives = 104/132 (78%)
Query: 86 YAATVNVINGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVVREASKRVLG 145
YAATV IN LE I LSD EL KT ++ +K +LD +LPEAF+VVREA RVLG
Sbjct: 17 YAATVKKINSLEQKIGNLSDEELFTKTSYFKDELKKGVTLDYILPEAFSVVREAGCRVLG 76
Query: 146 LRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYLARRDC 205
LR FDVQ+IG ++LH+G+IAEM+TGEGKTLVA L YLNAL GKGVH+VTVNDYLARRD
Sbjct: 77 LRVFDVQIIGAIILHQGKIAEMKTGEGKTLVATLAGYLNALSGKGVHIVTVNDYLARRDS 136
Query: 206 EWVGQVPRFLGM 217
EWVGQ+ +FLG+
Sbjct: 137 EWVGQIHKFLGL 148
>SECA_CAUCR (P38380) Preprotein translocase secA subunit
Length = 923
Score = 174 bits (442), Expect = 8e-43
Identities = 90/140 (64%), Positives = 105/140 (74%)
Query: 78 TGEATRKQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVVR 137
+ E K A V IN EA + LSD L+ KT E + R +K E+LD +L EAFAVVR
Sbjct: 12 SNERKVKTLATRVAKINAYEAEYAALSDEALKGKTAEFKARLEKGETLDDILNEAFAVVR 71
Query: 138 EASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVN 197
EASKRVLG+R FDVQ++GGMVLH I+EMRTGEGKTLVA LP YLNAL GKGVHV+TVN
Sbjct: 72 EASKRVLGMRHFDVQMVGGMVLHFSGISEMRTGEGKTLVATLPTYLNALEGKGVHVITVN 131
Query: 198 DYLARRDCEWVGQVPRFLGM 217
DYLARRD +W+GQV FLG+
Sbjct: 132 DYLARRDADWMGQVYNFLGL 151
>SECA_GUITH (O78441) Preprotein translocase secA subunit
Length = 877
Score = 172 bits (435), Expect = 5e-42
Identities = 89/141 (63%), Positives = 105/141 (74%)
Query: 77 DTGEATRKQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVV 136
D E Y VN IN LEA + KL+DSEL+++T + S + LLPE +A V
Sbjct: 8 DPNERRINPYKQIVNKINYLEAKLKKLTDSELQEQTERFIKLLSNNSSNEELLPEIYATV 67
Query: 137 REASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTV 196
REAS RVLGLR FDVQLIGG++L+ G+IAEM+TGEGKTLVA+LP YLNAL G GVHVVTV
Sbjct: 68 REASLRVLGLRHFDVQLIGGLILNDGKIAEMKTGEGKTLVALLPTYLNALAGFGVHVVTV 127
Query: 197 NDYLARRDCEWVGQVPRFLGM 217
NDYLARRD EWVGQV +FLG+
Sbjct: 128 NDYLARRDSEWVGQVHKFLGL 148
>SECA_MYCSM (P71533) Preprotein translocase secA subunit
Length = 957
Score = 169 bits (428), Expect = 3e-41
Identities = 84/134 (62%), Positives = 102/134 (75%)
Query: 84 KQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVVREASKRV 143
K+ + +N L ++ KLSD+ELR KT E ++R E LD LLPEAFAV REA+ RV
Sbjct: 15 KRLRKVADYVNALSDDVEKLSDAELRAKTEEFKKRVADGEDLDDLLPEAFAVAREAAWRV 74
Query: 144 LGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYLARR 203
L R FDVQ++GG LH G +AEM+TGEGKTL A+LP+YLNAL GKGVHVVTVNDYLARR
Sbjct: 75 LNQRHFDVQVMGGAALHFGNVAEMKTGEGKTLTAVLPSYLNALSGKGVHVVTVNDYLARR 134
Query: 204 DCEWVGQVPRFLGM 217
D EW+G+V RFLG+
Sbjct: 135 DSEWMGRVHRFLGL 148
>SECA_RHOCA (P52966) Preprotein translocase secA subunit
Length = 904
Score = 169 bits (427), Expect = 4e-41
Identities = 88/134 (65%), Positives = 103/134 (76%)
Query: 84 KQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVVREASKRV 143
K+ V IN LE KLSD+E+ KT EL+ RAQ ESLD+LL EAFA REA++R
Sbjct: 21 KRTRPLVAKINALEPAFEKLSDAEIVAKTRELQARAQAGESLDALLVEAFANCREAARRA 80
Query: 144 LGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYLARR 203
LGLR FD QL+GG+ LH+G IAEM+TGEGKTLVA PAYLNAL GKGVH+VTVNDYLARR
Sbjct: 81 LGLRAFDTQLMGGIFLHQGNIAEMKTGEGKTLVATFPAYLNALAGKGVHIVTVNDYLARR 140
Query: 204 DCEWVGQVPRFLGM 217
D EW+G+V R LG+
Sbjct: 141 DSEWMGKVYRHLGL 154
>SECA_ECOLI (P10408) Preprotein translocase secA subunit
Length = 901
Score = 169 bits (427), Expect = 4e-41
Identities = 88/138 (63%), Positives = 106/138 (76%)
Query: 80 EATRKQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVVREA 139
+ T ++ VN+IN +E + KLSD EL+ KT E R R +K E L++L+PEAFAVVREA
Sbjct: 15 DRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKGEVLENLIPEAFAVVREA 74
Query: 140 SKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDY 199
SKRV G+R FDVQL+GGMVL++ IAEMRTGEGKTL A LPAYLNAL GKGVHVVTVNDY
Sbjct: 75 SKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDY 134
Query: 200 LARRDCEWVGQVPRFLGM 217
LA+RD E + FLG+
Sbjct: 135 LAQRDAENNRPLFEFLGL 152
>SEA1_MYCLE (P57996) Preprotein translocase secA 1 subunit
Length = 940
Score = 166 bits (421), Expect = 2e-40
Identities = 83/138 (60%), Positives = 103/138 (74%), Gaps = 3/138 (2%)
Query: 84 KQYAATVNVINGLEANISKLSDSELRDKTFELRERA---QKRESLDSLLPEAFAVVREAS 140
K+ +N L N+ KL+D EL+ KT E ++R + ESLD LLPEAFAV REA+
Sbjct: 15 KRLKRVAEYVNTLSDNVEKLTDVELKAKTDEFKQRLADEKNPESLDDLLPEAFAVAREAA 74
Query: 141 KRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYL 200
RVL RPFDVQ++GG LH G +AEM+TGEGKTL +LPAYLNAL GKGVH+VTVNDYL
Sbjct: 75 WRVLDQRPFDVQVMGGAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGKGVHIVTVNDYL 134
Query: 201 ARRDCEWVGQVPRFLGMK 218
A+RD EW+G+V RFLG++
Sbjct: 135 AKRDSEWMGRVHRFLGLQ 152
>SECA_ODOSI (P49649) Preprotein translocase secA subunit
Length = 888
Score = 162 bits (409), Expect = 5e-39
Identities = 81/134 (60%), Positives = 106/134 (78%)
Query: 85 QYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVVREASKRVL 144
+Y + IN LE+ + L+D ELR+KT +L++R Q ++L++L+ E+FA+ REAS R L
Sbjct: 14 KYQTLIREINALESTVKTLTDGELRNKTNQLKQRYQDEQNLNNLIVESFALTREASYRTL 73
Query: 145 GLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYLARRD 204
GLR FDVQLIGG+VL+ G+IAEMRTGEGKTLVA LPAYLNAL KGVH+VTVN+YLA RD
Sbjct: 74 GLRHFDVQLIGGLVLNGGKIAEMRTGEGKTLVATLPAYLNALTKKGVHIVTVNEYLASRD 133
Query: 205 CEWVGQVPRFLGMK 218
+GQ+ RFLG++
Sbjct: 134 QTSMGQIYRFLGLE 147
>SECA_LISMO (P47847) Preprotein translocase secA subunit
Length = 837
Score = 159 bits (403), Expect = 3e-38
Identities = 87/153 (56%), Positives = 106/153 (68%), Gaps = 3/153 (1%)
Query: 65 LGGLLGGIFKGNDTGEATRKQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRES 124
+ GLL IF ++G+ K + I L + LSD LR+KT E +ER QK E+
Sbjct: 1 MAGLLKKIF---ESGKKDVKYLERKADEIIALADETAALSDDALREKTVEFKERVQKGET 57
Query: 125 LDSLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 184
LD LL EAFAV RE +KR LGL PF VQL+GG+VLH+G IAEM+TGEGKTL A LP YLN
Sbjct: 58 LDDLLVEAFAVAREGAKRALGLYPFKVQLMGGIVLHEGNIAEMKTGEGKTLTATLPVYLN 117
Query: 185 ALVGKGVHVVTVNDYLARRDCEWVGQVPRFLGM 217
AL G+GVHVVTVN+YLA RD E +G + FLG+
Sbjct: 118 ALSGEGVHVVTVNEYLAHRDAEEMGVLYNFLGL 150
>SECA_LISIN (Q927Y3) Preprotein translocase secA subunit
Length = 837
Score = 159 bits (403), Expect = 3e-38
Identities = 87/153 (56%), Positives = 106/153 (68%), Gaps = 3/153 (1%)
Query: 65 LGGLLGGIFKGNDTGEATRKQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRES 124
+ GLL IF ++G+ K + I L + LSD LR+KT E +ER QK E+
Sbjct: 1 MAGLLKKIF---ESGKKDVKYLERKADEIIALADETAALSDEALREKTVEFKERVQKGET 57
Query: 125 LDSLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 184
LD LL EAFAV RE +KR LGL PF VQL+GG+VLH+G IAEM+TGEGKTL A LP YLN
Sbjct: 58 LDDLLVEAFAVAREGAKRALGLYPFKVQLMGGIVLHEGNIAEMKTGEGKTLTATLPVYLN 117
Query: 185 ALVGKGVHVVTVNDYLARRDCEWVGQVPRFLGM 217
AL G+GVHVVTVN+YLA RD E +G + FLG+
Sbjct: 118 ALSGEGVHVVTVNEYLAHRDAEEMGVLYNFLGL 150
>SECA_BACSU (P28366) Preprotein translocase secA subunit
Length = 841
Score = 159 bits (402), Expect = 4e-38
Identities = 82/150 (54%), Positives = 104/150 (68%)
Query: 68 LLGGIFKGNDTGEATRKQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRESLDS 127
+LG + K D + T +Y N I+ + + LSD L+ KT E +ER +K + D
Sbjct: 1 MLGILNKMFDPTKRTLNRYEKIANDIDAIRGDYENLSDDALKHKTIEFKERLEKGATTDD 60
Query: 128 LLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALV 187
LL EAFAVVREAS+RV G+ PF VQL+GG+ LH G IAEM+TGEGKTL + LP YLNAL
Sbjct: 61 LLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALT 120
Query: 188 GKGVHVVTVNDYLARRDCEWVGQVPRFLGM 217
GKGVHVVTVN+YLA RD E +G++ FLG+
Sbjct: 121 GKGVHVVTVNEYLASRDAEQMGKIFEFLGL 150
>SECA_STRCO (P55021) Preprotein translocase secA subunit
Length = 947
Score = 159 bits (401), Expect = 5e-38
Identities = 79/125 (63%), Positives = 98/125 (78%)
Query: 93 INGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVVREASKRVLGLRPFDVQ 152
+N +E + + LSD+ELR T E ++R ESLD LLPEAFA VREA+KRVLG R +DVQ
Sbjct: 26 VNSIEEDFADLSDAELRALTDEYKQRYADGESLDDLLPEAFATVREAAKRVLGQRHYDVQ 85
Query: 153 LIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYLARRDCEWVGQVP 212
++GG LH G +AEM+TGEGKTLV LPAYLNAL G+GVH+VTVNDYLA RD E +G+V
Sbjct: 86 IMGGAALHMGYVAEMKTGEGKTLVGTLPAYLNALSGEGVHIVTVNDYLAERDSELMGRVH 145
Query: 213 RFLGM 217
+FLG+
Sbjct: 146 KFLGL 150
>SEA1_MYCTU (O05885) Preprotein translocase secA 1 subunit
Length = 949
Score = 159 bits (401), Expect = 5e-38
Identities = 79/138 (57%), Positives = 101/138 (72%), Gaps = 3/138 (2%)
Query: 84 KQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKR---ESLDSLLPEAFAVVREAS 140
K+ + + L ++ KL+D+ELR KT E + R + E+LD LLPEAFAV REA+
Sbjct: 15 KRLKKVADYVGTLSDDVEKLTDAELRAKTDEFKRRLADQKNPETLDDLLPEAFAVAREAA 74
Query: 141 KRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYL 200
RVL RPFDVQ++G LH G +AEM+TGEGKTL +LPAYLNAL G GVH+VTVNDYL
Sbjct: 75 WRVLDQRPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYL 134
Query: 201 ARRDCEWVGQVPRFLGMK 218
A+RD EW+G+V RFLG++
Sbjct: 135 AKRDSEWMGRVHRFLGLQ 152
>SECA_RICPR (Q9ZCX7) Preprotein translocase secA subunit
Length = 906
Score = 158 bits (400), Expect = 6e-38
Identities = 82/138 (59%), Positives = 103/138 (74%)
Query: 80 EATRKQYAATVNVINGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVVREA 139
+ T K+ + + IN E I LSD+ L++KT E +E+ + +LD +L EAFAVVREA
Sbjct: 14 DRTVKKLFSEITKINSFEPAIKILSDAALKNKTVEFKEKLKNGATLDDILYEAFAVVREA 73
Query: 140 SKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDY 199
+ RV G+R FDVQLIGG++LH+G IAEMRTGEGKTLVA LPAYLNAL KGVHVVTVNDY
Sbjct: 74 ASRVCGMRHFDVQLIGGIILHRGMIAEMRTGEGKTLVATLPAYLNALTEKGVHVVTVNDY 133
Query: 200 LARRDCEWVGQVPRFLGM 217
LA RD +G++ FLG+
Sbjct: 134 LALRDSASMGKIYNFLGL 151
>SECA_STRGR (P95759) Preprotein translocase secA subunit
Length = 940
Score = 158 bits (399), Expect = 8e-38
Identities = 79/125 (63%), Positives = 98/125 (78%)
Query: 93 INGLEANISKLSDSELRDKTFELRERAQKRESLDSLLPEAFAVVREASKRVLGLRPFDVQ 152
++ +E + LSD+ELR T E +ER ESLD LLPEAFA VREA+KRVLG R +DVQ
Sbjct: 26 VSSIEEDFVNLSDAELRALTDEYKERYADGESLDDLLPEAFATVREAAKRVLGQRHYDVQ 85
Query: 153 LIGGMVLHKGEIAEMRTGEGKTLVAILPAYLNALVGKGVHVVTVNDYLARRDCEWVGQVP 212
++GG+ LH G +AEM+TGEGKTLV LPAYLNAL GKGVH++TVNDYLA RD E +G+V
Sbjct: 86 MMGGVALHLGYVAEMKTGEGKTLVGTLPAYLNALSGKGVHLITVNDYLAERDSELMGRVH 145
Query: 213 RFLGM 217
+FLG+
Sbjct: 146 KFLGL 150
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.353 0.155 0.518
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,847,428
Number of Sequences: 164201
Number of extensions: 3231429
Number of successful extensions: 15390
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 15319
Number of HSP's gapped (non-prelim): 61
length of query: 1006
length of database: 59,974,054
effective HSP length: 120
effective length of query: 886
effective length of database: 40,269,934
effective search space: 35679161524
effective search space used: 35679161524
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.5 bits)
S2: 71 (32.0 bits)
Medicago: description of AC144728.10