Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144728.1 - phase: 0 
         (999 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

SBP1_ANTMA (Q38741) Squamosa-promoter binding protein 1               123  3e-27
SBP2_ANTMA (Q38740) Squamosa-promoter binding protein 2               119  3e-26
LG1_MAIZE (O04003) LIGULELESS1 protein                                111  8e-24
ATF1_SCHPO (P52890) Transcription factor atf1 (Transcription fac...    44  0.002
YBC9_YEAST (P38201) Hypothetical 42.6 kDa protein in AAC2-RPL19B...    44  0.003
YIQ9_YEAST (P40442) Hypothetical 99.7 kDa protein in SDL1 5'regi...    43  0.004
SR40_YEAST (P32583) Suppressor protein SRP40                           40  0.024
CMGA_MOUSE (P26339) Chromogranin A precursor (CgA) [Contains: Pa...    40  0.024
ORP1_HUMAN (Q9BXW6) Oxysterol binding protein-related protein 1 ...    39  0.091
DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contai...    39  0.091
ANK1_MOUSE (Q02357) Ankyrin 1 (Erythrocyte ankyrin)                    38  0.12
ANK1_HUMAN (P16157) Ankyrin 1 (Erythrocyte ankyrin) (Ankyrin R)        38  0.12
VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains: Lipov...    37  0.26
CAR1_DICDI (P13773) Cyclic AMP receptor 1                              37  0.26
YM41_YEAST (Q03213) Hypothetical 79.4 kDa protein in ALD2-DDR48 ...    37  0.34
CMGA_RAT (P10354) Chromogranin A precursor (CgA) [Contains: Panc...    37  0.34
AFY1_MOUSE (Q810B6) Ankyrin repeat and FYVE domain protein 1 (An...    37  0.34
VIT1_CHICK (P87498) Vitellogenin I precursor (Minor vitellogenin...    36  0.45
SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)          36  0.59
NCO3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) (...    36  0.59

>SBP1_ANTMA (Q38741) Squamosa-promoter binding protein 1
          Length = 131

 Score =  123 bits (308), Expect = 3e-27
 Identities = 59/104 (56%), Positives = 73/104 (69%), Gaps = 8/104 (7%)

Query: 128 VERDGKKSRG-------AGGTSNRAVCQVEDCGADLSRGKDYHRRHKVCEMHSKASRALV 180
           +  D KK+R        A G++ R+ CQVE+C A+++  K YHRRHKVCE H+KA   L 
Sbjct: 27  IGEDSKKTRALTPSGKRASGSTQRS-CQVENCAAEMTNAKPYHRRHKVCEFHAKAPVVLH 85

Query: 181 GNAMQRFCQQCSRFHILEEFDEGKRSCRRRLAGHNKRRRKTNQE 224
               QRFCQQCSRFH L EFDE KRSCRRRLAGHN+RRRK++ +
Sbjct: 86  SGLQQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSHD 129


>SBP2_ANTMA (Q38740) Squamosa-promoter binding protein 2
          Length = 171

 Score =  119 bits (299), Expect = 3e-26
 Identities = 56/97 (57%), Positives = 69/97 (70%)

Query: 133 KKSRGAGGTSNRAVCQVEDCGADLSRGKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCS 192
           K +   GG   +  C VE+CGADL   K Y++RH+VCE+H+KA    V   MQRFCQQCS
Sbjct: 71  KHTASGGGVVAQPCCLVENCGADLRNCKKYYQRHRVCEVHAKAPVVSVEGLMQRFCQQCS 130

Query: 193 RFHILEEFDEGKRSCRRRLAGHNKRRRKTNQEAVPNG 229
           RFH L EFD+ KRSCRRRLAGHN+RRRK++ E+   G
Sbjct: 131 RFHDLSEFDQTKRSCRRRLAGHNERRRKSSLESHKEG 167


>LG1_MAIZE (O04003) LIGULELESS1 protein
          Length = 399

 Score =  111 bits (278), Expect = 8e-24
 Identities = 51/76 (67%), Positives = 59/76 (77%), Gaps = 1/76 (1%)

Query: 147 CQVEDCGADLSRGKDYHRRHKVCEMHSKASRALV-GNAMQRFCQQCSRFHILEEFDEGKR 205
           CQ E C ADLS  K YHRRHKVCE HSKA   +  G   QRFCQQCSRFH+L+EFD+ K+
Sbjct: 185 CQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDAKK 244

Query: 206 SCRRRLAGHNKRRRKT 221
           SCR+RLA HN+RRRK+
Sbjct: 245 SCRKRLADHNRRRRKS 260


>ATF1_SCHPO (P52890) Transcription factor atf1 (Transcription factor
           mts1) (Protein sss1)
          Length = 566

 Score = 43.9 bits (102), Expect = 0.002
 Identities = 65/269 (24%), Positives = 107/269 (39%), Gaps = 28/269 (10%)

Query: 226 VPNGSPTNDDQTSSYLLISLLKILSNMHYQPTDQDLLTHLLRSLASQNDEQGSKNLSNLL 285
           V NG  TN DQ+  +   + +  L  +   P  Q  L    + ++S+ND+  S   +NLL
Sbjct: 257 VVNG--TNGDQSDYFGANAAVHGLCLLSQVPDQQQKLQ---QPISSENDQAASTTANNLL 311

Query: 286 RE-QENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDVRTSD 344
           ++ Q+    +      +   +     G+       TQ QP+     QQ     + + +  
Sbjct: 312 KQTQQQTFPDSIRPSFTQNTNPQAVTGTMNPQASRTQQQPMYFMGSQQ----FNGMPSVY 367

Query: 345 HQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLAT 404
              ++   PS++       +T D SGQ   N    N     S+        +PV     T
Sbjct: 368 GDTVNPADPSLT-----LRQTTDFSGQNAENG-STNLPQKTSNSDMPTANSMPVKLENGT 421

Query: 405 SSVDYPWTQQDS----HQSSPAQT-SGNSDSASAQSPSSSSGEAQ----SRTDRIVFKLF 455
              DY  +Q+ S    +QSSP  + +G + S SA   S S G ++    + TD    K F
Sbjct: 422 ---DYSTSQEPSSNANNQSSPTSSINGKASSESANGTSYSKGSSRRNSKNETDEEKRKSF 478

Query: 456 GKEPNEFPLVLRAQILDWLSQSPTDIESY 484
            +   +  L  R +   WLS     +E Y
Sbjct: 479 LERNRQAALKCRQRKKQWLSNLQAKVEFY 507


>YBC9_YEAST (P38201) Hypothetical 42.6 kDa protein in AAC2-RPL19B
           intergenic region
          Length = 376

 Score = 43.5 bits (101), Expect = 0.003
 Identities = 56/227 (24%), Positives = 98/227 (42%), Gaps = 23/227 (10%)

Query: 230 SPTNDDQTSSYLLISLLKILSNMHYQP--TDQDLLTHLLRSLASQNDEQGSKNLSNLLRE 287
           +P N D  S +L I+   I  N +     T  + L      LA+   +  S N SN    
Sbjct: 25  APLNCDVNSPFLPINNNDINVNAYGDENLTYSNFLLSYNDKLATTTAKNNSINNSNSNNN 84

Query: 288 QENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQMQQEM----VHTHDVRTS 343
             N      +  N+ ++      G+  S        P ++N+ Q  +    ++  D+ T 
Sbjct: 85  SNNNKNNNNNHNNNNLL------GNDISQMAFLLDYPSTLNEPQFAVNCKDIYRKDISTP 138

Query: 344 DHQLISSIKP-----SISNSP--PAYSETRDSSGQTKMNNF-DLNDIYVDSDDGTEDLER 395
              L+SS+ P     S+SNSP  P  S +    G+  ++N  + +DI+ D +   +D   
Sbjct: 139 S-SLVSSLPPAKFSLSLSNSPSPPPPSSSSLKHGEAIISNTSESSDIFADPNSFEKDTMP 197

Query: 396 LPVSTNLAT--SSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSS 440
           L     L    + ++YP    ++ +  PA +S +S S+S++S  SSS
Sbjct: 198 LTQELTLENLNNQLNYPDFTINAIEQDPAPSSFSSSSSSSESTVSSS 244


>YIQ9_YEAST (P40442) Hypothetical 99.7 kDa protein in SDL1 5'region
           precursor
          Length = 995

 Score = 43.1 bits (100), Expect = 0.004
 Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 23/240 (9%)

Query: 221 TNQEAVPNGSPTNDDQTSSYLLISLLKILSNMHYQPTDQDLLTHLLRSLASQNDEQGSKN 280
           +N  ++ + S +    +SS   +S+   ++      TD  +L+ + +S +S      +  
Sbjct: 27  SNSTSISSNSSSTSVVSSSSGSVSISSSIAETSSSATD--ILSSITQSASS------TSG 78

Query: 281 LSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDV 340
           +S+ +    + +     S++S  VS + S+ SQ S +       VS     Q    T DV
Sbjct: 79  VSSSVGPSSSSVVSSSVSQSSSSVSDVSSSVSQSSSSASDVSSSVS-----QSASSTSDV 133

Query: 341 RTSDHQLISS---IKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGTEDLERLP 397
            +S  Q  SS   +  S+S S  + S+   S  Q+  +  D++     S   T D+    
Sbjct: 134 SSSVSQSSSSASDVSSSVSQSSSSASDVSSSVSQSASSASDVSSSVSQSASSTSDVSSSV 193

Query: 398 VSTNLATSSVDYPWTQQDSHQ-------SSPAQTSGNSDSASAQSPSSSSGEAQSRTDRI 450
             ++ + S V    +Q  S         S  A ++ +  S+ +QS SS+SG + S +  +
Sbjct: 194 SQSSSSASDVSSSVSQSSSSASDVSSSVSQSASSTSDVSSSVSQSASSTSGVSSSGSQSV 253



 Score = 38.1 bits (87), Expect = 0.12
 Identities = 41/153 (26%), Positives = 63/153 (40%), Gaps = 12/153 (7%)

Query: 298 SRNSGMVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDVRTSDHQLISS---IKPS 354
           S++S   S + S+ SQ S +       VS     Q      DV +S  Q  SS   +  S
Sbjct: 138 SQSSSSASDVSSSVSQSSSSASDVSSSVS-----QSASSASDVSSSVSQSASSTSDVSSS 192

Query: 355 ISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLATSSVDYPWTQQ 414
           +S S  + S+   S  Q+  +  D++     S   T D+      +  +TS V    +  
Sbjct: 193 VSQSSSSASDVSSSVSQSSSSASDVSSSVSQSASSTSDVSSSVSQSASSTSGV----SSS 248

Query: 415 DSHQSSPAQTSGNSDSASAQSPSSSSGEAQSRT 447
            S   S A  S +S   S  S S++SG A S +
Sbjct: 249 GSQSVSSASGSSSSFPQSTSSASTASGSATSNS 281


>SR40_YEAST (P32583) Suppressor protein SRP40
          Length = 406

 Score = 40.4 bits (93), Expect = 0.024
 Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 3/179 (1%)

Query: 270 ASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQ 329
           +S++D   S + S+     +    E   S +     A  S+      T   + +P S + 
Sbjct: 95  SSESDSSSSGSSSSSSSSSDESSSES-ESEDETKKRARESDNEDAKETKKAKTEPESSSS 153

Query: 330 MQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDG 389
            +     +     S+    S    S S+S  + SE+   S     ++   +D   DSD  
Sbjct: 154 SESSSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSS 213

Query: 390 TEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQSRTD 448
           + D      S++ ++SS     +  DS  SS + +SG+SDS+S+   SS    +   +D
Sbjct: 214 SSDSSSDSDSSSSSSSSSSD--SDSDSDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSD 270



 Score = 37.7 bits (86), Expect = 0.15
 Identities = 42/183 (22%), Positives = 76/183 (40%), Gaps = 7/183 (3%)

Query: 268 SLASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSM 327
           S +S +    S +  +      +      SS +    S+   + S GS +  +     S 
Sbjct: 58  SSSSSSSSDSSDSSDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESS 117

Query: 328 NQMQQEMVHTHDVRTSDHQLISSIK-----PSISNSPPAYSETRDSSGQTKMNNFDLNDI 382
           ++ + E       R SD++     K     P  S+S  + S    SS +++  +   +D 
Sbjct: 118 SESESEDETKKRARESDNEDAKETKKAKTEPESSSSSESSSSGSSSSSESESGSESDSDS 177

Query: 383 YVDSDDGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGE 442
              S   + D E    S + ++SS     +  DS  SS + +S +SDS+S+ S SSS  +
Sbjct: 178 S-SSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSS-SDSSSDSDSSSSSSSSSSDSD 235

Query: 443 AQS 445
           + S
Sbjct: 236 SDS 238



 Score = 36.2 bits (82), Expect = 0.45
 Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 3/102 (2%)

Query: 349 SSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLATSSVD 408
           SS   S S+S  + S +  SSG++  ++   +     S D ++  +    S++ ++SS  
Sbjct: 29  SSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSS--SSSDSSDSSDSESSSSSSSSSSSS 86

Query: 409 YPWTQQDSHQSSPAQTSGNSDSASAQS-PSSSSGEAQSRTDR 449
              +  +S   S + +SG+S S+S+ S  SSS  E++  T +
Sbjct: 87  SSSSDSESSSESDSSSSGSSSSSSSSSDESSSESESEDETKK 128


>CMGA_MOUSE (P26339) Chromogranin A precursor (CgA) [Contains:
           Pancreastatin; Beta-granin; WE-14]
          Length = 463

 Score = 40.4 bits (93), Expect = 0.024
 Identities = 47/214 (21%), Positives = 88/214 (40%), Gaps = 26/214 (12%)

Query: 225 AVPNGSPTNDDQTSSYLLISLLKILSNMHYQPTDQDLLTHLLRSLASQNDEQGSKNLSNL 284
           A+P  SP     T   ++  +L+++S+   +P+   +    L +L      QG + + ++
Sbjct: 18  ALPVNSPMTKGDTK--VMKCVLEVISDSLSKPSPMPVSPECLETL------QGDERILSI 69

Query: 285 LREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDVRTSD 344
           LR Q NLL+E        +         + +   + Q QP    Q QQ+        +S 
Sbjct: 70  LRHQ-NLLKE--------LQDLALQGAKERAQQPLKQQQPPKQQQQQQQQQQQEQQHSSF 120

Query: 345 HQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLAT 404
              +S +  +   SP A  + RD++ +      D  +   DSD G +D      +T    
Sbjct: 121 EDELSEVFEN--QSPDA--KHRDAAAEVPSR--DTMEKRKDSDKGQQDGFE---ATTEGP 171

Query: 405 SSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSS 438
               +P   Q+S     +++ G   + + QSP+S
Sbjct: 172 RPQAFPEPNQESPMMGDSESPGEDTATNTQSPTS 205


>ORP1_HUMAN (Q9BXW6) Oxysterol binding protein-related protein 1
           (OSBP-related protein 1) (ORP-1)
          Length = 950

 Score = 38.5 bits (88), Expect = 0.091
 Identities = 38/116 (32%), Positives = 50/116 (42%), Gaps = 8/116 (6%)

Query: 767 LSEMG--LLHRAVRRNSKQLVELLLRYVPDNT-SDELGPEDKALVGGKN-HSYLFRPDAV 822
           L++MG   LHRA     K+LV LLL Y  D T  +  G   K +   +   S L   +  
Sbjct: 77  LNDMGDTPLHRAAFTGRKELVMLLLEYNADTTIVNGSGQTAKEVTHAEEIRSMLEAVERT 136

Query: 823 GPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGH 878
               L  L +AA ++G    L AL N P    +    N  D  G+TP   A  R H
Sbjct: 137 QQRKLEELLLAAAREGKTTELTALLNRPNPPDV----NCSDQLGNTPLHCAAYRAH 188


>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains:
           Dentin phosphoprotein (Dentin phosphophoryn) (DPP);
           Dentin sialoprotein (DSP)]
          Length = 1253

 Score = 38.5 bits (88), Expect = 0.091
 Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 11/180 (6%)

Query: 270 ASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQ 329
           +S +D +   + SN     +N      S+ ++   S+  S+ S  S +  +     S N 
Sbjct: 633 SSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSSSSDSSNS 692

Query: 330 MQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDI-YVDSDD 388
                       +SD    S+   S  +S  + S++ DSS  +  N+ D +     DS D
Sbjct: 693 SD----------SSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSD 742

Query: 389 GTEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQSRTD 448
            ++  +    S +  +S         DS  SS +  S NS  ++  S SS S ++ + +D
Sbjct: 743 SSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSD 802



 Score = 37.7 bits (86), Expect = 0.15
 Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 4/181 (2%)

Query: 268  SLASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSM 327
            S +S +D   S N S+      +      S+ +    S+  SN S  S +  + +   S 
Sbjct: 901  SNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSS 960

Query: 328  NQMQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSD 387
            N        ++   +SD     S   S S+     S++ DSS  +  +N   +    DS 
Sbjct: 961  NSGDS----SNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1016

Query: 388  DGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQSRT 447
            D +   +    S +  +S         DS  SS +  S +S  +S  S SS S ++   +
Sbjct: 1017 DSSNSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSGSSDSSDSSDSS 1076

Query: 448  D 448
            D
Sbjct: 1077 D 1077



 Score = 36.6 bits (83), Expect = 0.34
 Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 9/179 (5%)

Query: 270 ASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQ 329
           +  +D   S N S+   +  N      SS +S   ++  S+ S  S    + +   S N 
Sbjct: 771 SDSSDSSDSSNSSDS-NDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNS 829

Query: 330 MQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDG 389
                  ++   +SD    S    S S++    S + DSS  +  +N   +    DS D 
Sbjct: 830 SDSSD-SSNSSDSSDSSDSSDSSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDS 888

Query: 390 TEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQSRTD 448
            E       S+N + SS     +  DS  SS +  S +S ++S  S SS+S +  + +D
Sbjct: 889 NE-------SSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSD 940



 Score = 36.2 bits (82), Expect = 0.45
 Identities = 41/179 (22%), Positives = 68/179 (37%), Gaps = 14/179 (7%)

Query: 270 ASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQ 329
           +  +D   S N S+     ++      S  +    S+  SN S  + +  +     S N 
Sbjct: 741 SDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNS 800

Query: 330 MQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDG 389
                       +SD    S    S S++    S + DSS  +  N+ D +D    SD  
Sbjct: 801 SDSS-------NSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSS--NSSDSSDSSDSSDSS 851

Query: 390 TEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQSRTD 448
             D      S+N + SS        DS  SS +  S +S  ++  S SS S ++ + +D
Sbjct: 852 DSDSSNRSDSSNSSDSS-----DSSDSSNSSDSSDSSDSSDSNESSNSSDSSDSSNSSD 905



 Score = 35.4 bits (80), Expect = 0.77
 Identities = 38/182 (20%), Positives = 67/182 (35%), Gaps = 6/182 (3%)

Query: 270 ASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQ 329
           +  +D   S N SN     ++      SS +    S+  SN S  S +  + +   S + 
Sbjct: 651 SDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSSSSDSSNSSDSSDSSDSSNSSESSDS 710

Query: 330 MQQEMVHTHDV------RTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIY 383
                  + D        +SD    +S   S S+     S + DSS  +  +N   +   
Sbjct: 711 SDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDS 770

Query: 384 VDSDDGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEA 443
            DS D ++       + +  +S         DS  SS +  S +S  + + + S SS  +
Sbjct: 771 SDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSS 830

Query: 444 QS 445
            S
Sbjct: 831 DS 832



 Score = 35.0 bits (79), Expect = 1.0
 Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 6/176 (3%)

Query: 270  ASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQ 329
            +  +D   S + S      +N      S+ +    S+  SN S  S +  + +   S + 
Sbjct: 915  SDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSGDSSNSSDSSDS 974

Query: 330  MQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDG 389
               +   + +   S     SS     S+S  + S++ DSS  +  +N   +    DS D 
Sbjct: 975  NSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNS-SDSSDSSDSSDSSNSSDSSNSSDSSDS 1033

Query: 390  TEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQS 445
            ++  +    S +  +S      +   S  S  + +SG+SDS+ +   S SS  + S
Sbjct: 1034 SDSSDSSDSSDSSNSSD-----SSDSSDSSDSSDSSGSSDSSDSSDSSDSSDSSDS 1084



 Score = 34.3 bits (77), Expect = 1.7
 Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 12/155 (7%)

Query: 294 EGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDVRTSDHQLISSIKP 353
           E  SS +     +  SN S  S    +     S N        + D   S     SS   
Sbjct: 630 ESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSS--DSSDSSDSSSSSDSSSSS 687

Query: 354 SISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLATSSVDYPWTQ 413
             SNS    S++ DSS  +  N+ + +D    SD    D      S+N  +S  D     
Sbjct: 688 DSSNS----SDSSDSSDSS--NSSESSD---SSDSSDSDSSDSSDSSNSNSSDSDSS-NS 737

Query: 414 QDSHQSSPAQTSGNSDSASAQSPSSSSGEAQSRTD 448
            DS  SS +  S NS  +S  S SS+S ++   +D
Sbjct: 738 SDSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSD 772



 Score = 34.3 bits (77), Expect = 1.7
 Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 1/178 (0%)

Query: 268 SLASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSM 327
           S +S +D   S + S+     ++      S  +    S+  S+ S  S +  + +   S 
Sbjct: 727 SNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDS- 785

Query: 328 NQMQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSD 387
           N        +    +SD    S    S  +S    S + DSS  +  ++   +    DS 
Sbjct: 786 NDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSS 845

Query: 388 DGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQS 445
           D ++  +    + + +++S D   +   S+ S  + +S +SDS  + + S SS  + S
Sbjct: 846 DSSDSSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNSSDSSDSSNS 903



 Score = 32.7 bits (73), Expect = 5.0
 Identities = 41/187 (21%), Positives = 76/187 (39%), Gaps = 8/187 (4%)

Query: 268 SLASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSM 327
           S +S + +    + S+     ++   +  SS +S   S+  SN S  S +  +     S 
Sbjct: 558 SNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSS 617

Query: 328 NQMQQEMVHTH-DVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDS 386
           +    +   +  +  +SD    S    S S+     S++ DSS  +  N+ D +D    S
Sbjct: 618 DSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSS--NSSDSSDSSDSS 675

Query: 387 D-----DGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSG 441
           D     D +   +    S +  +S         DS  SS + +S +SDS+++ S  S S 
Sbjct: 676 DSSSSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSS 735

Query: 442 EAQSRTD 448
            +   +D
Sbjct: 736 NSSDSSD 742



 Score = 32.3 bits (72), Expect = 6.5
 Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 13/176 (7%)

Query: 270 ASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQ 329
           +S + +    + S+   + ++  R   S+ +    S+  SN S  S +  +     S N 
Sbjct: 835 SSNSSDSSDSSDSSDSSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNS 894

Query: 330 MQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDG 389
                  +    +SD     S   S S+     S++ +SS  +  +N   +    DS D 
Sbjct: 895 SDS----SDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDS 950

Query: 390 TEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQS 445
           + D      S+N   SS        +S  SS + +S +SDS+++   S SS  + S
Sbjct: 951 S-DSSNSSDSSNSGDSS--------NSSDSSDSNSSDSSDSSNSSDSSDSSDSSDS 997


>ANK1_MOUSE (Q02357) Ankyrin 1 (Erythrocyte ankyrin)
          Length = 1862

 Score = 38.1 bits (87), Expect = 0.12
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 759 DHPTLYQALSEMGL--LHRAVRRNSKQLVELLLRY---VPDNTSDELGPEDKALVGGKNH 813
           DH    QA ++ GL  +H A + +    V LLL+Y   + D T D L P   A   G + 
Sbjct: 289 DHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHR 348

Query: 814 SYLF------RPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGS 867
                     +P++    G TPLHIA  K+    V++ L      +      +A   +G 
Sbjct: 349 VAKVLLDKGAKPNSRALNGFTPLHIACKKNHIR-VMELLLKTGASI------DAVTESGL 401

Query: 868 TPEDYARLRGHYTYI-HLVQKKINKTQGAAHVVVEIPSNM 906
           TP   A   GH   + +L+Q+    +   ++V VE P +M
Sbjct: 402 TPLHVASFMGHLPIVKNLLQR--GASPNVSNVKVETPLHM 439



 Score = 34.3 bits (77), Expect = 1.7
 Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 20/146 (13%)

Query: 753 ETVNKGDHPTLYQALSEMGL--LHRAVRRNSKQLVELLLRYVPDN---TSDELGPEDKAL 807
           E VN G +     A S+ G   L+ A + N  ++V+ LL    +    T D   P   AL
Sbjct: 92  ELVNYGAN---VNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVAL 148

Query: 808 VGGKNH--SYLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDST 865
             G  +  ++L      G   L  LHIAA  D +      L NDP         +    T
Sbjct: 149 QQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPN-------PDVLSKT 201

Query: 866 GSTPEDYARLRGHYTYIHLVQKKINK 891
           G TP     +  HY  +++ Q  +N+
Sbjct: 202 GFTP---LHIAAHYENLNVAQLLLNR 224


>ANK1_HUMAN (P16157) Ankyrin 1 (Erythrocyte ankyrin) (Ankyrin R)
          Length = 1880

 Score = 38.1 bits (87), Expect = 0.12
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 759 DHPTLYQALSEMGL--LHRAVRRNSKQLVELLLRY---VPDNTSDELGPEDKALVGGKNH 813
           DH    QA ++ GL  +H A + +    V LLL+Y   + D T D L P   A   G + 
Sbjct: 292 DHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHLTPLHVAAHCGHHR 351

Query: 814 SYLF------RPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGS 867
                     +P++    G TPLHIA  K+    V++ L      +      +A   +G 
Sbjct: 352 VAKVLLDKGAKPNSRALNGFTPLHIACKKNHVR-VMELLLKTGASI------DAVTESGL 404

Query: 868 TPEDYARLRGHYTYI-HLVQKKINKTQGAAHVVVEIPSNM 906
           TP   A   GH   + +L+Q+    +   ++V VE P +M
Sbjct: 405 TPLHVASFMGHLPIVKNLLQR--GASPNVSNVKVETPLHM 442



 Score = 34.3 bits (77), Expect = 1.7
 Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 20/146 (13%)

Query: 753 ETVNKGDHPTLYQALSEMGL--LHRAVRRNSKQLVELLLRYVPDN---TSDELGPEDKAL 807
           E VN G +     A S+ G   L+ A + N  ++V+ LL    +    T D   P   AL
Sbjct: 95  ELVNYGAN---VNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVAL 151

Query: 808 VGGKNH--SYLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDST 865
             G  +  ++L      G   L  LHIAA  D +      L NDP         +    T
Sbjct: 152 QQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPN-------PDVLSKT 204

Query: 866 GSTPEDYARLRGHYTYIHLVQKKINK 891
           G TP     +  HY  +++ Q  +N+
Sbjct: 205 GFTP---LHIAAHYENLNVAQLLLNR 227


>VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains:
            Lipovitellin LV-1N; Lipovitellin LV-1C; Lipovitellin
            LV-2]
          Length = 1823

 Score = 37.0 bits (84), Expect = 0.26
 Identities = 54/240 (22%), Positives = 97/240 (39%), Gaps = 39/240 (16%)

Query: 268  SLASQNDEQGSK-----NLSNLLREQENLLREGGSSRNSGMVSALFSNGSQ--------- 313
            S +S +D+ G K     +  NL  ++ +  + G  S +S   S+  S+ S+         
Sbjct: 1143 SSSSSSDKSGKKTPRQGSTVNLAAKRASKKQRGKDSSSSSSSSSSSSDSSKSPHKHGGAK 1202

Query: 314  ------GSPTVITQHQPVSMNQMQQEMVHTHDVRTSDHQLISSIKPSISNSP-PAYSETR 366
                  G+P +  Q    S +             +S  +  S++KP ++  P PA S + 
Sbjct: 1203 RQHAGHGAPHLGPQSHSSSSSSSSSSS------SSSASKSFSTVKPPMTRKPRPARSSSS 1256

Query: 367  DSSGQTKMNNFDLNDIYVDSDDGT------EDLERLPVSTNLATSSVDYPWTQQDSHQSS 420
             SS  +  ++   +     S   +      + LE L V     ++  ++ +  Q   Q+S
Sbjct: 1257 SSSSDSSSSSSSSSSSSSSSSSSSSSSSESKSLEWLAVKDVNQSAFYNFKYVPQRKPQTS 1316

Query: 421  ----PAQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNEFPLVLRAQILDWLSQ 476
                PA +S +S S+S+ S SSSS ++        F+   K   +  +VLRA   D   Q
Sbjct: 1317 RRHTPASSSSSSSSSSSSSSSSSSSDSDMTVSAESFEKHSKP--KVVIVLRAVRADGKQQ 1374


>CAR1_DICDI (P13773) Cyclic AMP receptor 1
          Length = 392

 Score = 37.0 bits (84), Expect = 0.26
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)

Query: 356 SNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLATSSVDYPWTQQD 415
           +N+P  YS +R +SG+T   +   +D+   SD     LER P   N           QQ+
Sbjct: 295 NNNPSPYSSSRGTSGKTMGGHPTGDDVQCSSDMEQCSLERHPNMVN----------NQQN 344

Query: 416 SHQSSPAQTSGNSDSASAQSPSSSSGEAQS 445
            + +   Q + N + +S+ S SSS  E Q+
Sbjct: 345 LNNNYGLQQNYNDEGSSSSSLSSSDEEKQT 374


>YM41_YEAST (Q03213) Hypothetical 79.4 kDa protein in ALD2-DDR48
           intergenic region
          Length = 719

 Score = 36.6 bits (83), Expect = 0.34
 Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 18/182 (9%)

Query: 216 KRRRKTNQEAVPNGSPTNDDQTSSYLLISLLKILSNMHYQPTDQDLLTHLLRSLASQNDE 275
           KRRR+  Q    N + TND  +++   IS L  L+N H   T  +     + S       
Sbjct: 381 KRRRRNTQSN--NNASTNDHASAAQKPISALSPLTNSHNSTTSMNYTNSSIHS------- 431

Query: 276 QGSKNLSNLLREQENLLREGGSSRNS----GMVSALFSNGSQGSPTVITQ-HQPVSMNQM 330
            G  + SN   +  +L   G ++  S     + +A F       P +I    QP+S +Q+
Sbjct: 432 -GVTSASNSFHDLNSLNNFGTTTALSLPSLALDNASFPPNQNVIPPIINNTQQPLSFSQL 490

Query: 331 QQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGT 390
             +   T ++  S     S +  +I N   A +        T  +N D +    D DD  
Sbjct: 491 INQDSTTSELLPSGK---SGVNTNIVNRNRASTLPSYPKPMTVKSNVDDDGYQEDDDDDG 547

Query: 391 ED 392
           +D
Sbjct: 548 DD 549


>CMGA_RAT (P10354) Chromogranin A precursor (CgA) [Contains:
           Pancreastatin; Beta-granin; WE-14]
          Length = 466

 Score = 36.6 bits (83), Expect = 0.34
 Identities = 49/214 (22%), Positives = 84/214 (38%), Gaps = 31/214 (14%)

Query: 225 AVPNGSPTNDDQTSSYLLISLLKILSNMHYQPTDQDLLTHLLRSLASQNDEQGSKNLSNL 284
           A+P  SP     T   ++  +L+++S+   +P+   +    L +L      QG + + ++
Sbjct: 18  ALPVNSPMTKGDTK--VMKCVLEVISDSLSKPSPMPVSPECLETL------QGDERVLSI 69

Query: 285 LREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDVRTSD 344
           LR Q NLL+E            L     QG+     Q Q     Q QQ+        + +
Sbjct: 70  LRHQ-NLLKE------------LQDLALQGAKERAQQQQQQQQQQQQQQQQQQQQHSSFE 116

Query: 345 HQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLAT 404
            +L    +   + SP A      S   +K    D  +   DSD G +D       T    
Sbjct: 117 DELSEVFE---NQSPAAKHGDAASEAPSK----DTVEKREDSDKGQQDAFE---GTTEGP 166

Query: 405 SSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSS 438
               +P  +Q+S     +Q+ G   + + QSP+S
Sbjct: 167 RPQAFPEPKQESSMMGNSQSPGEDTANNTQSPTS 200


>AFY1_MOUSE (Q810B6) Ankyrin repeat and FYVE domain protein 1
           (Ankyrin repeats hooked to a zinc finger motif)
          Length = 1169

 Score = 36.6 bits (83), Expect = 0.34
 Identities = 45/163 (27%), Positives = 59/163 (35%), Gaps = 19/163 (11%)

Query: 772 LLHRAVRRNSKQLVELLLRYVPDNTSDELGPEDKALVGGKNHSYLFRPDAVGPAGLTPLH 831
           LLHRAV  N++     L+R   D  S    P      G          +     G TPLH
Sbjct: 728 LLHRAVDENNESTACFLIRSGCDVNS----PRQPGTNG--------EGEEEARDGQTPLH 775

Query: 832 IAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGHYTYIHLVQKKINK 891
           +AA     E V        C++   A  NA+D+ G TP   A    H   I L+    N 
Sbjct: 776 LAASWGLEETV-------QCLLEFGANVNAQDAEGRTPVHVAISNQHSVIIQLLISHPNI 828

Query: 892 TQGAAHVVVEIPSNMTESNKNPKQNESFTSLEIGKAEVRRSQG 934
                      P     + KN K  E+    E G AE   ++G
Sbjct: 829 ELSVRDRQGLTPFACAMTYKNNKAAEAILKRESGAAEQVDNKG 871


>VIT1_CHICK (P87498) Vitellogenin I precursor (Minor vitellogenin)
            [Contains: Lipovitellin I (LVI); Phosvitin (PV);
            Lipovitellin II (LVII); YGP42]
          Length = 1912

 Score = 36.2 bits (82), Expect = 0.45
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 3/124 (2%)

Query: 327  MNQMQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSET---RDSSGQTKMNNFDLNDIY 383
            M ++++ +  T +  T + +  SS   SIS S  + + T    DS  +    +  +N   
Sbjct: 1075 MKRVKKILDDTDNQATRNSRSSSSSASSISESSESTTSTPSSSDSDNRASQGDPQINLKS 1134

Query: 384  VDSDDGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEA 443
              S    +       S++  +SS     +   S  SS +++S +SDS+S+ S SSSS  +
Sbjct: 1135 RQSKANEKKFYPFGDSSSSGSSSSSSSSSSSSSDSSSSSRSSSSSDSSSSSSSSSSSSSS 1194

Query: 444  QSRT 447
            +S++
Sbjct: 1195 KSKS 1198



 Score = 32.7 bits (73), Expect = 5.0
 Identities = 36/183 (19%), Positives = 73/183 (39%), Gaps = 12/183 (6%)

Query: 266  LRSLASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPV 325
            ++ +    D Q ++N  +      ++     S+ ++   S   +  SQG P +  + +  
Sbjct: 1078 VKKILDDTDNQATRNSRSSSSSASSISESSESTTSTPSSSDSDNRASQGDPQINLKSRQS 1137

Query: 326  SMNQMQ-QEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYV 384
              N+ +      +    +S     SS   S S+S    S + DSS  +  ++        
Sbjct: 1138 KANEKKFYPFGDSSSSGSSSSSSSSSSSSSDSSSSSRSSSSSDSSSSSSSSSSS------ 1191

Query: 385  DSDDGTEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQ 444
             S   ++   R   S   ++SS     ++  S  SS + + G+S S+S  S +    + Q
Sbjct: 1192 -SSSKSKSSSRSSKSNRSSSSSN----SKDSSSSSSKSNSKGSSSSSSKASGTRQKAKKQ 1246

Query: 445  SRT 447
            S+T
Sbjct: 1247 SKT 1249


>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)
          Length = 220

 Score = 35.8 bits (81), Expect = 0.59
 Identities = 41/173 (23%), Positives = 70/173 (39%), Gaps = 19/173 (10%)

Query: 270 ASQNDEQGSKNLSNLLREQENLLREGGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQ 329
           +S N+  GS   ++      N    G S+ NS   S+  S+GS G  ++       S +Q
Sbjct: 38  SSSNNTSGSSRNNSSGSSSSNNSSSGSSAGNSSGSSSSNSSGSSGIGSLSRNSSSSSSSQ 97

Query: 330 MQQEMVHTHDVRTSDHQLISSIKPSISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDG 389
                       +S  + +S+   S S+S    +  ++S+  ++  N D          G
Sbjct: 98  A---------AGSSSSRRVSADGSSSSSSASNSAAAQNSASSSETINAD----------G 138

Query: 390 TEDLERLPVSTNLATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGE 442
           +E+      S+    S+        D  QSS + +S  S+ ASA S SS S +
Sbjct: 139 SENESSSSSSSAAQNSATRSQVINADGSQSSSSSSSSASNQASATSSSSVSAD 191



 Score = 35.4 bits (80), Expect = 0.77
 Identities = 25/88 (28%), Positives = 38/88 (42%), Gaps = 7/88 (7%)

Query: 354 SISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDDGTEDLERLPVSTNLATSSVDYPWTQ 413
           S +N+    S T +SSG +  NN             T +      S N + SS +     
Sbjct: 2   SSTNNSSGSSSTNNSSGSSSTNNSS-------GSSSTNNASGSSSSNNTSGSSRNNSSGS 54

Query: 414 QDSHQSSPAQTSGNSDSASAQSPSSSSG 441
             S+ SS   ++GNS  +S+ + S SSG
Sbjct: 55  SSSNNSSSGSSAGNSSGSSSSNSSGSSG 82



 Score = 33.9 bits (76), Expect = 2.2
 Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 10/157 (6%)

Query: 295 GGSSRNSGMVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDVRTSDHQLISSIKPS 354
           G SS N+   S+  +N S  S T        S N       ++    +S++   SS   S
Sbjct: 9   GSSSTNNSSGSSSTNNSSGSSSTNNASGSSSSNNTSGSSRNNSSGSSSSNN---SSSGSS 65

Query: 355 ISNSPPAYSETRDSSGQTKMNNFDLNDIYVDSDD--GTEDLERLPVSTNLATSSVDYPWT 412
             NS  + S + +SSG + + +   N     S    G+    R+    + ++SS      
Sbjct: 66  AGNS--SGSSSSNSSGSSGIGSLSRNSSSSSSSQAAGSSSSRRVSADGSSSSSSASNSAA 123

Query: 413 QQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQSRTDR 449
            Q+S  SS      N+D +  +S SSSS  AQ+   R
Sbjct: 124 AQNSASSSETI---NADGSENESSSSSSSAAQNSATR 157


>NCO3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48)
           (NCoA-3) (Amplified in breast cancer-1 protein homolog)
           (AIB-1) (Fragment)
          Length = 1082

 Score = 35.8 bits (81), Expect = 0.59
 Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 32/181 (17%)

Query: 300 NSGMVSALFSNGSQGSPTVITQHQPVSMNQMQQEMVHTHDVRT------SDHQLISSIKP 353
           + G+ ++L S  S   P +   + P +MN  Q     + D ++        + + SS+ P
Sbjct: 230 SEGVGTSLLSTLSSPGPKL--DNSP-NMNINQPSKASSQDSKSPLGLYCEQNPVESSVCP 286

Query: 354 SISNSPPAYSETRDSSG----------QTKMNNFDLNDIYVDSDD-GTEDLERLPVSTNL 402
           S S  PP   E +++SG          ++K +   L  +   SDD G   L   P+ +N 
Sbjct: 287 SNSRDPPVTKENKENSGEASETPRGPLESKGHKKLLQLLTCSSDDRGHSSLTNSPLDSNC 346

Query: 403 ATSSVDYPWTQQDSHQSSPAQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLF--GKEPN 460
             SS+           +SP+  S +S S +  S S+  G       RI+ KL   G  P 
Sbjct: 347 KDSSISV---------TSPSGVS-SSTSGAVSSTSNMHGSLLQEKHRILHKLLQNGNSPA 396

Query: 461 E 461
           E
Sbjct: 397 E 397


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.316    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,454,373
Number of Sequences: 164201
Number of extensions: 5289702
Number of successful extensions: 15582
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 15310
Number of HSP's gapped (non-prelim): 242
length of query: 999
length of database: 59,974,054
effective HSP length: 120
effective length of query: 879
effective length of database: 40,269,934
effective search space: 35397271986
effective search space used: 35397271986
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)


Medicago: description of AC144728.1