BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144656.4 + phase: 0
(472 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BZLF_EBV (P03206) BZLF1 trans-activator protein (EB1) (Zebra) 33 1.2
MYOC_HUMAN (Q99972) Myocilin precursor (Trabecular meshwork-indu... 33 1.6
HCR_GORGO (Q8HZ59) Alpha helical coiled-coil rod protein 33 1.6
BLM_HUMAN (P54132) Bloom's syndrome protein (EC 3.6.1.-) (RecQ p... 32 2.7
MASK_XENLA (Q9PTG8) CPEB-associated factor Maskin (Cytoplasmic p... 32 3.5
YHRA_SCHPO (Q8WZK0) Probable RNA-binding protein C839.10 32 4.6
NIFB_RHISN (Q53205) FeMo cofactor biosynthesis protein nifB 32 4.6
KF4A_XENLA (Q91784) Chromosome-associated kinesin KLP1 (Chromoki... 32 4.6
HCR_PONPY (Q8HZ58) Alpha helical coiled-coil rod protein 32 4.6
HCR_PANTR (Q8HZ60) Alpha helical coiled-coil rod protein 32 4.6
HCR_PANPA (Q8HZ57) Alpha helical coiled-coil rod protein 32 4.6
HCR_HUMAN (Q8TD31) Alpha helical coiled-coil rod protein (Putati... 32 4.6
RA50_METJA (Q58718) DNA double-strand break repair rad50 ATPase 31 6.0
MYSN_DROME (Q99323) Myosin heavy chain, non-muscle (Zipper prote... 31 6.0
KF4A_HUMAN (O95239) Chromosome-associated kinesin KIF4A (Chromok... 31 6.0
YFA7_YEAST (P43583) Hypothetical 207.6 kDa protein in SMC1-SEC4 ... 31 7.9
YE81_METJA (Q58876) Hypothetical protein MJ1481 31 7.9
IPYR_THELI (P77992) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyro... 31 7.9
GIDB_CAMJE (Q9PNU3) Methyltransferase gidB (EC 2.1.-.-) (Glucose... 31 7.9
GIDA_WIGBR (Q8D3K0) Glucose inhibited division protein A 31 7.9
>BZLF_EBV (P03206) BZLF1 trans-activator protein (EB1) (Zebra)
Length = 245
Score = 33.5 bits (75), Expect = 1.2
Identities = 31/118 (26%), Positives = 51/118 (42%), Gaps = 10/118 (8%)
Query: 336 QLGNRSVIAHEAYVKWVIDRANKWK----MPYPRQRLVTSTVSAIPLPLPPESLEGYQKQ 391
Q G+ S + A V + AN+ + + P+ V + P PESLE +
Sbjct: 115 QPGDNSTVQTAAAVVFACPGANQGQQLADIGVPQPAPVAAPARRTRKPQQPESLEECDSE 174
Query: 392 LDIERRENSMWEVKYRKKKQEYDTVKNLLDQQIQANCKEKNENARLKASIQRKEDFLD 449
L+I+R +N + K R K K LL + + +EN RL+ +++ LD
Sbjct: 175 LEIKRYKNRVASRKCRAK------FKQLLQHYREVAAAKSSENDRLRLLLKQMCPSLD 226
>MYOC_HUMAN (Q99972) Myocilin precursor (Trabecular meshwork-induced
glucocorticoid response protein)
Length = 504
Score = 33.1 bits (74), Expect = 1.6
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 381 PPESLEGYQKQLDIERRENSMWEVKYRKKKQEYDTV---KNLLDQQIQANCKEKNEN--A 435
P E+ EG Q++L RRE E + R+ + Y + K++L+++ + +++NEN
Sbjct: 110 PQETQEGLQRELGTLRRERDQLETQTRELETAYSNLLRDKSVLEEE-KKRLRQENENLAR 168
Query: 436 RLKASIQRKEDFLDKICP 453
RL++S Q CP
Sbjct: 169 RLESSSQEVARLRRGQCP 186
>HCR_GORGO (Q8HZ59) Alpha helical coiled-coil rod protein
Length = 782
Score = 33.1 bits (74), Expect = 1.6
Identities = 16/46 (34%), Positives = 26/46 (55%)
Query: 367 RLVTSTVSAIPLPLPPESLEGYQKQLDIERRENSMWEVKYRKKKQE 412
R+ + +S IPL PP + ++QLD +R + +MWE +QE
Sbjct: 26 RMAPTWLSDIPLVQPPGHQDVSERQLDTQRPQVTMWERDVSSDRQE 71
>BLM_HUMAN (P54132) Bloom's syndrome protein (EC 3.6.1.-) (RecQ
protein-like 3) (DNA helicase, RecQ-like, type 2)
Length = 1417
Score = 32.3 bits (72), Expect = 2.7
Identities = 24/84 (28%), Positives = 39/84 (45%), Gaps = 15/84 (17%)
Query: 372 TVSAIPLPLPPESLEGYQKQLDIERRENSMW--------------EVKYRKKKQEYDTVK 417
T + + LPP S E Q L E++++S W EV + QE D++K
Sbjct: 200 TTNTVKTDLPPPSSESEQIDLTEEQKDDSEWLSSDVICIDDGPIAEVHINEDAQESDSLK 259
Query: 418 NLLDQQIQANCKEKN-ENARLKAS 440
L+ + + K+KN E A L ++
Sbjct: 260 THLEDERDNSEKKKNLEEAELHST 283
>MASK_XENLA (Q9PTG8) CPEB-associated factor Maskin (Cytoplasmic
polyadenylation element binding protein-associated
factor Maskin)
Length = 931
Score = 32.0 bits (71), Expect = 3.5
Identities = 17/71 (23%), Positives = 40/71 (55%), Gaps = 8/71 (11%)
Query: 383 ESLEGYQKQLDIERRENSMWEVKYRKKKQEYDTVKNLLDQQI--------QANCKEKNEN 434
E+LEGY+K + ++ + V+ +K++Q Y +K ++++ K K+E
Sbjct: 827 EALEGYRKNEEALKKCVEDYLVRIKKEEQRYQALKAHAEEKLNRANEEIAHVRSKAKSEA 886
Query: 435 ARLKASIQRKE 445
RL+A++++++
Sbjct: 887 TRLQATLRKEQ 897
>YHRA_SCHPO (Q8WZK0) Probable RNA-binding protein C839.10
Length = 695
Score = 31.6 bits (70), Expect = 4.6
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 17/107 (15%)
Query: 378 LPLPPESLEGYQKQLDIERRENSMWEVKYRKKKQEY------------DTVKNLLDQQIQ 425
LP+ E + ++ Q +++RE + +Y +EY D ++NLL +
Sbjct: 308 LPVIEEEIRSFRDQSAMKKREKQRSKDEYASLYKEYTRKEQEKLRKQNDDLQNLLSKHRI 367
Query: 426 ANCKEKNENARLKASIQRKEDFLDKICPGRKKRRMDLFNGPHLDSEE 472
+ NA L+A E F D+ +KRR D L++EE
Sbjct: 368 SRIPMSTVNAFLRAEDSIPESFSDEQAYYEEKRRKD-----QLEAEE 409
>NIFB_RHISN (Q53205) FeMo cofactor biosynthesis protein nifB
Length = 493
Score = 31.6 bits (70), Expect = 4.6
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 104 KIPAIANALHLEIADIKNKFITRAGLQCLPYNFLYQKATICFERSETDAFEAILALLIYG 163
K+ A+AN E+ + I G C +N K FER ++ + L + G
Sbjct: 110 KVVAVAN----EVPQLSVLGIAGPGDACYDWN----KTRATFERVASEIPDIKLCISTNG 161
Query: 164 IVLFPNVDKFVDMNAIQIFLTQNPV 188
+ L +VDK +MN + +T N V
Sbjct: 162 LALPEHVDKLAEMNVSHVTITINMV 186
>KF4A_XENLA (Q91784) Chromosome-associated kinesin KLP1
(Chromokinesin)
Length = 1226
Score = 31.6 bits (70), Expect = 4.6
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 395 ERRENSMWEVKYRKKKQEYDTVKNLLDQQIQAN-CKEKNE-----NARLKASIQRKEDFL 448
+++ + ++K + +K++Y+ +K D Q QAN + K E N RLK ++QR+++ +
Sbjct: 669 QQKTKEVIQLKEKDRKRQYELLKLERDFQKQANVLRRKTEEAASANKRLKEALQRQKEAM 728
Query: 449 DK 450
+K
Sbjct: 729 EK 730
>HCR_PONPY (Q8HZ58) Alpha helical coiled-coil rod protein
Length = 782
Score = 31.6 bits (70), Expect = 4.6
Identities = 15/46 (32%), Positives = 26/46 (55%)
Query: 367 RLVTSTVSAIPLPLPPESLEGYQKQLDIERRENSMWEVKYRKKKQE 412
R+ + +S IPL PP + +++LD +R + +MWE +QE
Sbjct: 26 RMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQE 71
>HCR_PANTR (Q8HZ60) Alpha helical coiled-coil rod protein
Length = 782
Score = 31.6 bits (70), Expect = 4.6
Identities = 15/46 (32%), Positives = 26/46 (55%)
Query: 367 RLVTSTVSAIPLPLPPESLEGYQKQLDIERRENSMWEVKYRKKKQE 412
R+ + +S IPL PP + +++LD +R + +MWE +QE
Sbjct: 26 RMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQE 71
>HCR_PANPA (Q8HZ57) Alpha helical coiled-coil rod protein
Length = 782
Score = 31.6 bits (70), Expect = 4.6
Identities = 15/46 (32%), Positives = 26/46 (55%)
Query: 367 RLVTSTVSAIPLPLPPESLEGYQKQLDIERRENSMWEVKYRKKKQE 412
R+ + +S IPL PP + +++LD +R + +MWE +QE
Sbjct: 26 RMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQE 71
>HCR_HUMAN (Q8TD31) Alpha helical coiled-coil rod protein (Putative
gene 8 protein) (Pg8)
Length = 782
Score = 31.6 bits (70), Expect = 4.6
Identities = 15/46 (32%), Positives = 26/46 (55%)
Query: 367 RLVTSTVSAIPLPLPPESLEGYQKQLDIERRENSMWEVKYRKKKQE 412
R+ + +S IPL PP + +++LD +R + +MWE +QE
Sbjct: 26 RMAPTWLSDIPLVQPPGHQDVSERRLDTQRPQVTMWERDVSSDRQE 71
>RA50_METJA (Q58718) DNA double-strand break repair rad50 ATPase
Length = 1005
Score = 31.2 bits (69), Expect = 6.0
Identities = 26/86 (30%), Positives = 44/86 (50%), Gaps = 20/86 (23%)
Query: 390 KQLDIERRENSMWEVKYRKKKQEYDTVKNLLDQQIQANCKEKNENARLKASIQRKEDFLD 449
K +DIE ENS+ E++ +KK ++NL ++I+ N K N+ +K R + LD
Sbjct: 443 KNIDIESIENSLKEIEEKKK-----VLENLQKEKIELNKKLGEINSEIK----RLKKILD 493
Query: 450 KI------CPGRK-----KRRMDLFN 464
++ CP K ++M+L N
Sbjct: 494 ELKEVEGKCPLCKTPIDENKKMELIN 519
>MYSN_DROME (Q99323) Myosin heavy chain, non-muscle (Zipper protein)
(Myosin II) (Non-muscle MHC)
Length = 2057
Score = 31.2 bits (69), Expect = 6.0
Identities = 20/93 (21%), Positives = 42/93 (44%)
Query: 359 WKMPYPRQRLVTSTVSAIPLPLPPESLEGYQKQLDIERRENSMWEVKYRKKKQEYDTVKN 418
W++ + L+ T L + L+ +++LD + +E KY++ E T+
Sbjct: 919 WRLYTKVKPLLEVTKQEEKLVQKEDELKQVREKLDTLAKNTQEYERKYQQALVEKTTLAE 978
Query: 419 LLDQQIQANCKEKNENARLKASIQRKEDFLDKI 451
L +I+ + + +RL A Q ED + ++
Sbjct: 979 QLQAEIELCAEAEESRSRLMARKQELEDMMQEL 1011
>KF4A_HUMAN (O95239) Chromosome-associated kinesin KIF4A
(Chromokinesin)
Length = 1232
Score = 31.2 bits (69), Expect = 6.0
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 395 ERRENSMWEVKYRKKKQEYDTVKNLLDQQIQAN-CKEKNE-----NARLKASIQRKEDFL 448
++R+ + ++K R +K++Y+ +K + Q Q+N + K E N RLK ++Q++ +
Sbjct: 666 QKRDKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQREVA 725
Query: 449 DK 450
DK
Sbjct: 726 DK 727
>YFA7_YEAST (P43583) Hypothetical 207.6 kDa protein in SMC1-SEC4
intergenic region
Length = 1804
Score = 30.8 bits (68), Expect = 7.9
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 23 NLGRMVKNPE---HFRNRYGYLLNILRTNVDEGLINTLVQFYDPLYHCFTFSDYQLVPTL 79
+LG KNP+ ++ + + YLL + +N L+ YD L F S ++++ +L
Sbjct: 583 SLGSQNKNPDIANYYISCFAYLLELDPSNAYLIYDKILIDLYDTLADQFINSRHRIISSL 642
Query: 80 EEYSHWVGLPVLDQV 94
++++ + V+D++
Sbjct: 643 KQFTRVIRFIVMDKL 657
>YE81_METJA (Q58876) Hypothetical protein MJ1481
Length = 213
Score = 30.8 bits (68), Expect = 7.9
Identities = 29/132 (21%), Positives = 60/132 (44%), Gaps = 21/132 (15%)
Query: 298 KPVYLILDRDFFLYKKDDANQ-RAQFKKAWYSIIRKDRNQL------------------G 338
K +YL+++ D FLYKK ++ + K + +I K + L G
Sbjct: 51 KAIYLLIEADDFLYKKAPKHELNEEEAKEFCKLIIKCQEHLNKILANFGFEFEEKEIDEG 110
Query: 339 NRSVIAHEAYVKWVIDRANKWKMPYPRQRLVTSTVSAIPLPLPPESLEGYQKQLDIERRE 398
+++++ K + ++ K+ L + AI +P ++LEG +K+++I R+
Sbjct: 111 ALYIVSNKKLFKKLKNKNPNLKVVCTEGMLDIEDMRAI--GVPEKALEGLKKKVEIARKN 168
Query: 399 NSMWEVKYRKKK 410
+ KY+ +K
Sbjct: 169 VERFIEKYKPEK 180
>IPYR_THELI (P77992) Inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho-hydrolase) (PPase)
Length = 176
Score = 30.8 bits (68), Expect = 7.9
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 95 PFHGLEPGPKIPAIANAL 112
PFH LEPGP++P + AL
Sbjct: 3 PFHDLEPGPEVPEVVYAL 20
>GIDB_CAMJE (Q9PNU3) Methyltransferase gidB (EC 2.1.-.-) (Glucose
inhibited division protein B)
Length = 188
Score = 30.8 bits (68), Expect = 7.9
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 18/137 (13%)
Query: 21 LRNLGRMVKNPEHFRNRYGYLLNILRT-NVDEGLINTLVQFYDPLYHCFTFSDYQLVPTL 79
L+N VK + +++ + N+ N+DE + +++ F D+ +
Sbjct: 14 LKNFEEKVKIYKELLSKFNRIHNLTHLKNIDENIFDSI--------KILDFYDFSKAKNI 65
Query: 80 EEYSHWVGLPV-----LDQVPFHGLEPGPKIPAIANALHLEIADIKNKFITRAGLQCLPY 134
+ G PV L Q FH EP PK A L +E ++ N I + +Q
Sbjct: 66 ADIGSGAGFPVVFLAFLLQSNFHLFEPNPKKAAFLRTLKIE-CELPNLHIYKEKVQEYKN 124
Query: 135 NFLYQKATICFERSETD 151
F KA I R+ D
Sbjct: 125 TF---KADIITSRALMD 138
>GIDA_WIGBR (Q8D3K0) Glucose inhibited division protein A
Length = 628
Score = 30.8 bits (68), Expect = 7.9
Identities = 23/73 (31%), Positives = 33/73 (44%), Gaps = 10/73 (13%)
Query: 398 ENSMWEVKYRKKKQEYDTVKNLLDQQIQANCKEKNE---NARLKASIQRKE-------DF 447
E+ W Y KK Y +KNL + +I N +EKN+ N SI +E +
Sbjct: 461 EDDRWNNFYNKKNIIYKEIKNLKNTKILFNKEEKNKINLNINKSGSITAEEILRRPEITY 520
Query: 448 LDKICPGRKKRRM 460
D IC KR++
Sbjct: 521 NDLICYNFIKRKL 533
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.140 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,270,989
Number of Sequences: 164201
Number of extensions: 2671041
Number of successful extensions: 6342
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6330
Number of HSP's gapped (non-prelim): 25
length of query: 472
length of database: 59,974,054
effective HSP length: 114
effective length of query: 358
effective length of database: 41,255,140
effective search space: 14769340120
effective search space used: 14769340120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC144656.4