BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144656.10 - phase: 0
(324 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MK11_YEAST (P20484) MAK11 protein 93 1e-18
SKBF_SCHPO (O74453) Shk1 kinase-binding protein 15 80 5e-15
YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466 74 5e-13
PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkw... 72 2e-12
YS00_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800 68 4e-11
KMHA_DICDI (P42527) Myosin heavy chain kinase A (EC 2.7.1.129) (... 66 1e-10
PR19_CAEEL (Q10051) PRP19/PSO4 homolog 66 1e-10
TAF5_YEAST (P38129) Transcription initiation factor TFIID subuni... 61 3e-09
LI23_CAEEL (Q09990) F-box/WD-repeat protein lin-23 (Abnormal cel... 60 7e-09
YL24_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124 60 1e-08
FW1B_HUMAN (Q9UKB1) F-box/WD-repeat protein 11 (F-box/WD-repeat ... 58 4e-08
HET1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1 57 5e-08
PR46_YEAST (Q12417) Pre-mRNA splicing factor PRP46 57 6e-08
YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4 in ch... 56 1e-07
PRP4_ARATH (O22212) Hypothetical Trp-Asp repeats containing prot... 55 2e-07
GBLP_LEIMA (Q25306) Guanine nucleotide-binding protein beta subu... 54 5e-07
TRA7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.... 54 7e-07
TRA7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.... 54 7e-07
GBLP_LEIIN (P62884) Guanine nucleotide-binding protein beta subu... 54 7e-07
GBLP_LEICH (P62883) Guanine nucleotide-binding protein beta subu... 54 7e-07
>MK11_YEAST (P20484) MAK11 protein
Length = 468
Score = 92.8 bits (229), Expect = 1e-18
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 23/235 (9%)
Query: 1 MSSKRRISLVAGSYERFIWGFNLN-PN--------TQTLTPVFSYPSHLSLIKTVAVSNS 51
+ K + ++ GSYE I +L+ PN T P+F + +H IK +AVS
Sbjct: 58 IGDKNQFRIIVGSYEHNILCLSLDIPNQKENDAAKTPHFMPIFHFQAHSLSIKCLAVSRR 117
Query: 52 VVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPN----------LPFPRNLV 101
+ SG +D+ I +YDL LG+L H ++TAL F P + + L+
Sbjct: 118 YLVSGSNDEHIRIYDLQKRKELGTLLSHQGSITALQFSHPASSSEDAAVSKGSKNSKWLL 177
Query: 102 SADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRR 161
SA D + ++ + + TL H VND+ IHP+ +IA++VS D + NL+ R
Sbjct: 178 SASEDHKIMVWRVKDWETVGTLKGHTARVNDVDIHPTNRIAISVSDDHSIRLWNLMTLRN 237
Query: 162 SFCCRLDK---EASIVRF-DVSGDSFFMAVDEIVNVHQAEDARLLMELQCPKRVL 212
+ +L K + VR+ GD F + + + V +++ A++ E+ ++ L
Sbjct: 238 AAVLKLRKYNTNGTCVRWLGAKGDYFAVGLRDRVLIYETGSAKVFKEIVFQRKTL 292
>SKBF_SCHPO (O74453) Shk1 kinase-binding protein 15
Length = 341
Score = 80.5 bits (197), Expect = 5e-15
Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 21/282 (7%)
Query: 7 ISLVAGSYERFIWGFNLNPNTQTLTPVFSYPSHLSLIKTVAVSNSVVASGGSDDTIHLYD 66
+ V G+Y I+G + + + P++ + +H + +AV +AS SD+TI ++D
Sbjct: 2 LRFVVGTYTHLIYGVDADIERKKCKPLWLFEAHEGALTALAVDGIYLASTSSDETIKIFD 61
Query: 67 LSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRN-LVSADADGSLAIFDADGFVHLKTL-S 124
+ + + + S T ++ ++ F +N L++ +G ++++ ++ + TL S
Sbjct: 62 HTRNVQIADV----SVPTDIANACIRDMCFTKNHLLACHDNGQISMWSKGSWLLVHTLKS 117
Query: 125 VHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDKEASIVRFDVSGDSFF 184
KG+ +A+HPS K+ALTV D + +LVRG+ L + F ++ SF
Sbjct: 118 SSHKGITGIAVHPSEKLALTVGGDGKLRLWDLVRGKGGKVLPLSTIPESILF-LNESSFV 176
Query: 185 MAVDEIVNVHQAEDARLL-MELQCPKRVLCAAPAKNGLLYTGGEDRNITAWDLKSGKVAY 243
+ ++ + + L + LC +K L G ++ + D GK+ +
Sbjct: 177 IMSRRGIDAFKLDLTSLFSFSSKSQLNALCLYQSK---LIVGRDNGTVLVLDTSDGKILH 233
Query: 244 CIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWD 285
AH RVK + + D YL+ +ASSDG++ WD
Sbjct: 234 EF-TAHKKRVKSVYPVDD--------YLI-TASSDGSVCIWD 265
Score = 33.9 bits (76), Expect = 0.57
Identities = 24/86 (27%), Positives = 40/86 (45%), Gaps = 8/86 (9%)
Query: 30 LTPVFSYPSHLSLIKTVAVSNSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFY 89
LT +FS+ S S + + + S + G + T+ + D S L T H V ++
Sbjct: 190 LTSLFSFSSK-SQLNALCLYQSKLIVGRDNGTVLVLDTSDGKILHEFTAHKKRVKSV--- 245
Query: 90 SPPNLPFPRNLVSADADGSLAIFDAD 115
P L++A +DGS+ I+D D
Sbjct: 246 ----YPVDDYLITASSDGSVCIWDKD 267
>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466
Length = 1526
Score = 73.9 bits (180), Expect = 5e-13
Identities = 72/304 (23%), Positives = 132/304 (42%), Gaps = 32/304 (10%)
Query: 8 SLVAGSYERFIWGFNLNPNTQTLTPVFSYPSHLSLIKTVAVS--NSVVASGGSDDTIHLY 65
+L +GS ++ + + +N + T + H S + +V + S++ASG SD T+ L+
Sbjct: 1214 TLASGSSDQTVRLWEINSSKCLCT----FQGHTSWVNSVVFNPDGSMLASGSSDKTVRLW 1269
Query: 66 DLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSV 125
D+S+S L + H++ V +++F P L S D ++ +++ L T
Sbjct: 1270 DISSSKCLHTFQGHTNWVNSVAFN-----PDGSMLASGSGDQTVRLWEISSSKCLHTFQG 1324
Query: 126 HKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGR--RSFCCRLDKEASIVRFDVSGDSF 183
H V+ + P G + + S D + ++ G +F + S++ S D
Sbjct: 1325 HTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVI---FSPDGA 1381
Query: 184 FMAV---DEIVNVHQAEDARLLMELQCPKRVL--CAAPAKNGLLYTGGEDRNITAWDLKS 238
+A D+ V + + L LQ + LL +G +D+ + W++ S
Sbjct: 1382 ILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISS 1441
Query: 239 GKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDVRMA---ATEKSE 295
G+ Y + H V+ + SD ++AS S D TI+ WDV+ T KSE
Sbjct: 1442 GECLYTL-HGHINSVRSVAFSSD-------GLILASGSDDETIKLWDVKTGECIKTLKSE 1493
Query: 296 PLAE 299
+ E
Sbjct: 1494 KIYE 1497
Score = 64.7 bits (156), Expect = 3e-10
Identities = 65/258 (25%), Positives = 114/258 (43%), Gaps = 27/258 (10%)
Query: 39 HLSLIKTVAVSNS--VVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPF 96
H S + +V S ++ASG D T+ L+D+S+ L + H+S V ++ F SP +L
Sbjct: 905 HNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVF-SPNSL-- 961
Query: 97 PRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNL 156
L S +D ++ ++D L H V +A + G + T S D + ++
Sbjct: 962 --MLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDI 1019
Query: 157 VRGRRSFCCRLDKEASIVRFDV-SGDSFFMAV---DEIVNVHQAEDARLLMELQ----CP 208
+ + S VR V S D +A D+ V + L LQ C
Sbjct: 1020 SSSQCFYI--FQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCV 1077
Query: 209 KRVLCAAPAKNGLLYTGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDE 268
+ V+ + +L +GG+D+ + WD+ SG Y + + + + V+ +V + T
Sbjct: 1078 RSVVFS--PDGAMLASGGDDQIVRLWDISSGNCLYTL-QGYTSWVRFLVFSPNGVT---- 1130
Query: 269 PYLVASASSDGTIRAWDV 286
+A+ SSD +R WD+
Sbjct: 1131 ---LANGSSDQIVRLWDI 1145
Score = 63.5 bits (153), Expect = 7e-10
Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 25/263 (9%)
Query: 33 VFSYPSHLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYS 90
+++ H + + VA S + +ASG D T+ L+D+S+S L L H+S V ++ F
Sbjct: 1151 LYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFN- 1209
Query: 91 PPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSC 150
P L S +D ++ +++ + L T H VN + +P G + + S D
Sbjct: 1210 ----PDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKT 1265
Query: 151 FAMVNLVRGRRSFCCRL----DKEASIVRFDVSGDSFFM-AVDEIVNVHQAEDARLLMEL 205
+ ++ S C + V F+ G + D+ V + + ++ L
Sbjct: 1266 VRLWDI---SSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTF 1322
Query: 206 QCPKRVLCAA--PAKNGLLYTGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEA 263
Q + + +L +G +D+ + W + SG+ Y H V ++ D A
Sbjct: 1323 QGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTF-LGHTNWVGSVIFSPDGA 1381
Query: 264 TGDDEPYLVASASSDGTIRAWDV 286
++AS S D T+R W +
Sbjct: 1382 -------ILASGSGDQTVRLWSI 1397
Score = 63.2 bits (152), Expect = 9e-10
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 19/259 (7%)
Query: 34 FSYPSHLSLIKTVAVSN--SVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSP 91
+ + H S +++V S+ +++ASG D T+ L+D+S+ + L +L H+S V ++ F
Sbjct: 1026 YIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVF--- 1082
Query: 92 PNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCF 151
P L S D + ++D L TL + V L P+G S D
Sbjct: 1083 --SPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIV 1140
Query: 152 AMVNLVRGRRSFCCRLDKE-ASIVRFDVSGDSFFM-AVDEIVNVHQAEDARLLMELQCPK 209
+ ++ + + + + V F G + + D+ V + ++ L LQ
Sbjct: 1141 RLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHT 1200
Query: 210 RVLCAA--PAKNGLLYTGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDD 267
+ + L +G D+ + W++ S K C + H + V +V D +
Sbjct: 1201 SWVNSVVFNPDGSTLASGSSDQTVRLWEINSSK-CLCTFQGHTSWVNSVVFNPDGS---- 1255
Query: 268 EPYLVASASSDGTIRAWDV 286
++AS SSD T+R WD+
Sbjct: 1256 ---MLASGSSDKTVRLWDI 1271
Score = 58.2 bits (139), Expect = 3e-08
Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 23/241 (9%)
Query: 53 VASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIF 112
+A+G SD + L+D+S+ L +L H++ V A++F P L S D ++ ++
Sbjct: 1131 LANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAF-----SPDGATLASGSGDQTVRLW 1185
Query: 113 DADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFC-CRLDKEA 171
D L L H VN + +P G T++ S V L S C C
Sbjct: 1186 DISSSKCLYILQGHTSWVNSVVFNPDGS---TLASGSSDQTVRLWEINSSKCLCTFQGHT 1242
Query: 172 SIVRFDVSGDSFFM----AVDEIVNVHQAEDARLLMELQCPKRVL--CAAPAKNGLLYTG 225
S V V M + D+ V + ++ L Q + A +L +G
Sbjct: 1243 SWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASG 1302
Query: 226 GEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWD 285
D+ + W++ S K + + H + V + D ++AS S D T+R W
Sbjct: 1303 SGDQTVRLWEISSSKCLHTF-QGHTSWVSSVTFSPDGT-------MLASGSDDQTVRLWS 1354
Query: 286 V 286
+
Sbjct: 1355 I 1355
Score = 56.2 bits (134), Expect = 1e-07
Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 23/255 (9%)
Query: 40 LSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFP 97
L + TVA S + A+G S + ++ +T L + H+S V ++ F +
Sbjct: 864 LGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKM--- 920
Query: 98 RNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLV 157
L S D ++ ++D LKT H V + P+ + + S D + ++
Sbjct: 921 --LASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDIS 978
Query: 158 RGRRSFCCRLDKE-ASIVRFDVSGDSFFM-AVDEIVNVHQAEDARLLMELQ----CPKRV 211
G + + V F++ G + D+ V + ++ Q C + V
Sbjct: 979 SGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSV 1038
Query: 212 LCAAPAKNGLLYTGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYL 271
+ + + +L +G +D+ + WD+ SG Y + + H + V+ +V D A +
Sbjct: 1039 VFS--SDGAMLASGSDDQTVRLWDISSGNCLYTL-QGHTSCVRSVVFSPDGA-------M 1088
Query: 272 VASASSDGTIRAWDV 286
+AS D +R WD+
Sbjct: 1089 LASGGDDQIVRLWDI 1103
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA
(EC 2.7.1.37)
Length = 742
Score = 71.6 bits (174), Expect = 2e-12
Identities = 70/273 (25%), Positives = 112/273 (40%), Gaps = 25/273 (9%)
Query: 51 SVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLA 110
S++A G D IH++D+++ L +L H+ V A++F L L S D ++
Sbjct: 472 SLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGAL-----LASGSDDATVR 526
Query: 111 IFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDKE 170
++D H V D+A P G + + SRD + N+ G + +
Sbjct: 527 LWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTD 586
Query: 171 -ASIVRFDVSGDSFFM-AVDEIVNVHQAEDARLLMELQCP-KRVLCAAPAKNGLLYTGGE 227
V F G + D + + + LQ P + V+ A + +G + G
Sbjct: 587 YVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGS 646
Query: 228 DRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDVR 287
D + WD+ SG+ + E H V+ + D A L+AS S D TIR WDV
Sbjct: 647 DSTVHLWDVASGEALHTF-EGHTDWVRAVAFSPDGA-------LLASGSDDRTIRLWDV- 697
Query: 288 MAATEK-------SEPLAECKTQSRLTCLAGSS 313
AA E+ +EP+ T LA +S
Sbjct: 698 -AAQEEHTTLEGHTEPVHSVAFHPEGTTLASAS 729
Score = 62.8 bits (151), Expect = 1e-09
Identities = 57/254 (22%), Positives = 102/254 (39%), Gaps = 20/254 (7%)
Query: 39 HLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPF 96
H ++ VA S +++ASG D T+ L+D++ + H+ V ++F ++
Sbjct: 500 HTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSM-- 557
Query: 97 PRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNL 156
+ S DG+ +++ L H V +A P G + + SRD + ++
Sbjct: 558 ---VASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDV 614
Query: 157 VRGRRSFCCRLDKEASI-VRFDVSGDSFFMAVDEIVNVHQAEDARLLMELQCPK---RVL 212
G+ + E + + F G D V++ L + R +
Sbjct: 615 ATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAV 674
Query: 213 CAAPAKNGLLYTGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLV 272
+P LL +G +DR I WD+ + + + E H V + + T +
Sbjct: 675 AFSP-DGALLASGSDDRTIRLWDV-AAQEEHTTLEGHTEPVHSVAFHPEGTT-------L 725
Query: 273 ASASSDGTIRAWDV 286
ASAS DGTIR W +
Sbjct: 726 ASASEDGTIRIWPI 739
Score = 43.1 bits (100), Expect = 0.001
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 186 AVDEIVNVHQAEDARLLMELQCPKRVLCAAPAKNGLLYTGGE-DRNITAWDLKSGKVAYC 244
A E + H+ + R+L + + A + G L GG D+ I WD+ SG +
Sbjct: 440 APSESADPHELNEPRILTT---DREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDELHT 496
Query: 245 IEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDVRMA 289
+E H V+ + D A L+AS S D T+R WDV A
Sbjct: 497 LE-GHTDWVRAVAFSPDGA-------LLASGSDDATVRLWDVAAA 533
Score = 40.8 bits (94), Expect = 0.005
Identities = 39/134 (29%), Positives = 53/134 (39%), Gaps = 26/134 (19%)
Query: 26 NTQTLTPVFSYPSHLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTV 83
N T T H + VA S S+VASG D TI L+D++T L + V
Sbjct: 571 NVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENV 630
Query: 84 TALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVH---------LKTLSVHKKGVNDLA 134
+L+F SP DGS+ + +D VH L T H V +A
Sbjct: 631 VSLAF-SP--------------DGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVA 675
Query: 135 IHPSGKIALTVSRD 148
P G + + S D
Sbjct: 676 FSPDGALLASGSDD 689
Score = 38.9 bits (89), Expect = 0.018
Identities = 23/80 (28%), Positives = 42/80 (51%), Gaps = 7/80 (8%)
Query: 35 SYPSHLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPP 92
++ H ++ VA S +++ASG D TI L+D++ +L H+ V +++F+
Sbjct: 663 TFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFH--- 719
Query: 93 NLPFPRNLVSADADGSLAIF 112
P L SA DG++ I+
Sbjct: 720 --PEGTTLASASEDGTIRIW 737
>YS00_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800
Length = 1258
Score = 67.8 bits (164), Expect = 4e-11
Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 23/242 (9%)
Query: 52 VVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAI 111
++ASG +D T+ L+D T + SL H+ + ++F P + L SA D S+ +
Sbjct: 950 ILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAF-----SPDSQTLASASTDSSVRL 1004
Query: 112 FDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDKEA 171
++ + L H V + HP GKI T S D + N+ G+ C + E
Sbjct: 1005 WNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQ---CLKTLSEH 1061
Query: 172 S--IVRFDVSGDSFFMA---VDEIVNVHQAEDARLLMELQ-CPKRVLCAAPAKNG-LLYT 224
S I+ S D +A D+ V + R + L+ RV A + NG ++ T
Sbjct: 1062 SDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIAT 1121
Query: 225 GGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAW 284
D+ + WD + GK + H V I D ++ASAS D T+R W
Sbjct: 1122 CSTDQTVKIWDWQQGKCLKTL-TGHTNWVFDIAFSPDGK-------ILASASHDQTVRIW 1173
Query: 285 DV 286
DV
Sbjct: 1174 DV 1175
Score = 65.9 bits (159), Expect = 1e-10
Identities = 60/251 (23%), Positives = 107/251 (41%), Gaps = 53/251 (21%)
Query: 38 SHLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLP 95
SH +++VA S +ASG D TI +++ T L + H+++V +++ YSP +
Sbjct: 808 SHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIA-YSPDS-- 864
Query: 96 FPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVN 155
+ LVS D ++ ++D + +KTL H V +A P G+ VS D + N
Sbjct: 865 --KILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWN 922
Query: 156 LVRGRRSFCCRLDKEASIVRFDVSGDSFFMAVDEIVNVHQAEDARLLMELQCPKRVLCAA 215
G+ C + +++ D + V + D ++L
Sbjct: 923 CRTGQ---CLK---------------AWYGNTDWALPVAFSPDRQILA------------ 952
Query: 216 PAKNGLLYTGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASA 275
+G D+ + WD ++GK + E H + GI D T +ASA
Sbjct: 953 --------SGSNDKTVKLWDWQTGKYISSL-EGHTDFIYGIAFSPDSQT-------LASA 996
Query: 276 SSDGTIRAWDV 286
S+D ++R W++
Sbjct: 997 STDSSVRLWNI 1007
Score = 64.7 bits (156), Expect = 3e-10
Identities = 74/292 (25%), Positives = 129/292 (43%), Gaps = 29/292 (9%)
Query: 10 VAGSYERFIWGFNLNPNT------QTLTPVFSYPSHLSLIKTVAVS--NSVVASGGSDDT 61
VA S +R I N T QT + S H I +A S + +AS +D +
Sbjct: 942 VAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSS 1001
Query: 62 IHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLK 121
+ L+++ST L +H+ V A+ F+ P + + + AD ++ +++ LK
Sbjct: 1002 VRLWNISTGQCFQILLEHTDWVYAVVFH-----PQGKIIATGSADCTVKLWNISTGQCLK 1056
Query: 122 TLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCR--LDKEASIVRFDVS 179
TLS H + +A P G++ + S D + + GR R ++ S + F +
Sbjct: 1057 TLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAI-FSPN 1115
Query: 180 GDSFFM-AVDEIVNVHQAEDARLLMELQCPKR-VLCAAPAKNG-LLYTGGEDRNITAWDL 236
G+ + D+ V + + + L L V A + +G +L + D+ + WD+
Sbjct: 1116 GEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDV 1175
Query: 237 KSGKVAY-CIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDVR 287
+GK + CI H +V S + D E +VAS S D T+R W+V+
Sbjct: 1176 NTGKCHHICIGHTH-------LVSSVAFSPDGE--VVASGSQDQTVRIWNVK 1218
Score = 54.7 bits (130), Expect = 3e-07
Identities = 59/261 (22%), Positives = 106/261 (40%), Gaps = 31/261 (11%)
Query: 39 HLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPF 96
H + ++ V S ++AS G+D+ + L+ + + +LT H V +++F+ P
Sbjct: 683 HSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFH-----PD 737
Query: 97 PRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNL 156
L SA D ++ ++D L+TL+ H V +A P G + + D + ++
Sbjct: 738 GETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDV 797
Query: 157 VRGRRSFCCRLDKEAS----IVRFDVSGDSFFMAVDE----IVNVHQAEDARLLMELQCP 208
+G+ C R K + V F G + + I N H E + +
Sbjct: 798 SQGK---CLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNS 854
Query: 209 KRVLCAAPAKNGLLYTGGEDRNITAWDLKSGKVAYCIE--EAHAARVKGIVVLSDEATGD 266
+ +P +L +G DR I WD ++ CI+ H V + D T
Sbjct: 855 VYSIAYSPDSK-ILVSGSGDRTIKLWDCQT---HICIKTLHGHTNEVCSVAFSPDGQT-- 908
Query: 267 DEPYLVASASSDGTIRAWDVR 287
+A S D ++R W+ R
Sbjct: 909 -----LACVSLDQSVRLWNCR 924
Score = 46.2 bits (108), Expect = 1e-04
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 27/283 (9%)
Query: 14 YERFIWGFNLNP----NTQTLTPVFSYPSHLSLIKTVAVSNSVVASGGSDDTIHLYDLST 69
++ ++ G NL+ N+ VF+ L + ++A+ +D + ++++ +
Sbjct: 614 WQAYLQGVNLHDVDFANSDLSCCVFTETLGNILSAAFSPEGQLLATCDTDCHVRVWEVKS 673
Query: 70 SSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKG 129
L HS+ V + F P L S AD ++ ++ V +KTL+ H+
Sbjct: 674 GKLLLICRGHSNWVRFVVFS-----PDGEILASCGADENVKLWSVRDGVCIKTLTGHEHE 728
Query: 130 VNDLAIHPSGKIALTVSRDSCFAMVNLVRGR--RSFCCRLDKEASIVRFDVSGDSF-FMA 186
V +A HP G+ + S D + ++ G ++ D V F G++ A
Sbjct: 729 VFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTD-WVRCVAFSPDGNTLASSA 787
Query: 187 VDEIVNVHQAEDARLLMELQCPKRVL--CAAPAKNGLLYTGGEDRNITAWDLKSGKVAYC 244
D + + + L L+ + A A L +G DR I W+ +G+ C
Sbjct: 788 ADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGE---C 844
Query: 245 IEE--AHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWD 285
++ H V I D ++ S S D TI+ WD
Sbjct: 845 LKTYIGHTNSVYSIAYSPDSK-------ILVSGSGDRTIKLWD 880
Score = 38.9 bits (89), Expect = 0.018
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 49 SNSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGS 108
+ ++A+ +D T+ ++D L +LT H++ V ++F P + L SA D +
Sbjct: 1115 NGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAF-----SPDGKILASASHDQT 1169
Query: 109 LAIFDAD-GFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRG 159
+ I+D + G H + H V+ +A P G++ + S+D + N+ G
Sbjct: 1170 VRIWDVNTGKCHHICIG-HTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTG 1220
Score = 33.1 bits (74), Expect = 0.97
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 16/159 (10%)
Query: 134 AIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDKEASIVRFDV-SGDSFFMA---VDE 189
A P G++ T D + + G+ CR ++ VRF V S D +A DE
Sbjct: 649 AFSPEGQLLATCDTDCHVRVWEVKSGKLLLICR--GHSNWVRFVVFSPDGEILASCGADE 706
Query: 190 IVNVHQAEDARLLMELQCPKR-VLCAAPAKNG-LLYTGGEDRNITAWDLKSGKVAYCIEE 247
V + D + L + V A +G L + D+ I WD++ G +
Sbjct: 707 NVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLT- 765
Query: 248 AHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDV 286
H V+ + D T +AS+++D TI+ WDV
Sbjct: 766 GHTDWVRCVAFSPDGNT-------LASSAADHTIKLWDV 797
>KMHA_DICDI (P42527) Myosin heavy chain kinase A (EC 2.7.1.129) (MHCK
A)
Length = 1146
Score = 66.2 bits (160), Expect = 1e-10
Identities = 58/276 (21%), Positives = 123/276 (44%), Gaps = 40/276 (14%)
Query: 21 FNLNPNTQTLTPVFSYPSHLSLIKTVAVSNSVVASGGSDDTI--HLYDLSTSSSLGSLTD 78
F++N N + L ++ H I+++A +++ + + D+TI H+ + + +L
Sbjct: 896 FDVNDNWKCL---YTVNGHRKSIESIACNSNYIFTSSPDNTIKVHIIRSGNTKCIETLVG 952
Query: 79 HSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLS-VHKKGVNDLAIHP 137
H+ V + + + L S D ++ ++D F +K+ VH K + LA+
Sbjct: 953 HTGEVNCV-------VANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLAL-- 1003
Query: 138 SGKIALTVSRDSCF--------AMVNLVRGRRSFCCRLDKEASIVRFDVSGDSFFMAVDE 189
SG+ + D +M+ ++G + L AS + F + D
Sbjct: 1004 SGRYLFSGGNDQIIYVWDTETLSMLFNMQGHEDWVLSLHCTASYL--------FSTSKDN 1055
Query: 190 IVNVHQAEDARLLMELQCPKRVLCAAPAKNGLLYTGGEDRNITAWDLKSGKVAYCIEEAH 249
++ + + + L+ + + K+ LY+G ED +I WDL + + Y I ++H
Sbjct: 1056 VIKIWDLSNFSCIDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSH 1115
Query: 250 AARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWD 285
+ VK ++V +++ + SA+ DG+I+ W+
Sbjct: 1116 SLGVKCLMVFNNQ---------IISAAFDGSIKVWE 1142
>PR19_CAEEL (Q10051) PRP19/PSO4 homolog
Length = 492
Score = 65.9 bits (159), Expect = 1e-10
Identities = 60/262 (22%), Positives = 106/262 (39%), Gaps = 56/262 (21%)
Query: 43 IKTVAVSNSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVS 102
I + + ++ +GG D T+ LYD + + H+ + A+ + P N+ +S
Sbjct: 214 ITALDIKGNLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLH-PDNI----TAIS 268
Query: 103 ADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRS 162
A AD + ++ A + VH+ V D++++ SG L+ S DS +A ++ G+
Sbjct: 269 ASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKS- 327
Query: 163 FCCRLDKEASIVRFDVSGDSFFMAVDEIVNVHQAEDARLLMELQCPKRVLCAAPAKNGLL 222
C++ E + VH E +GL+
Sbjct: 328 -LCKVSVEPG----------------SQIAVHSIEF------------------HPDGLI 352
Query: 223 Y-TGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTI 281
+ TG D + WDLK+ VA H A V+ I + Y +A+ S DG +
Sbjct: 353 FGTGAADAVVKIWDLKNQTVAAAF-PGHTAAVRSIAF-------SENGYYLATGSEDGEV 404
Query: 282 RAWDVRMA------ATEKSEPL 297
+ WD+R A E+ +P+
Sbjct: 405 KLWDLRKLKNLKTFANEEKQPI 426
>TAF5_YEAST (P38129) Transcription initiation factor TFIID subunit 5
(TBP-associated factor 5) (TBP-associated factor 90 kDa)
(TAFII-90)
Length = 798
Score = 61.2 bits (147), Expect = 3e-09
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 52/246 (21%)
Query: 50 NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSL 109
N + SG D T+ L+ + T ++L S H+ V +SF P +A D +
Sbjct: 537 NKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFS-----PLGHYFATASHDQTA 591
Query: 110 AIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDK 169
++ D L+ + H V+ ++ HP+G T S D CR+
Sbjct: 592 RLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKT--------------CRM-- 635
Query: 170 EASIVRFDVS-GDSFFMAVDEIVNVHQAEDARLLMELQCPKRVLCAAPAKNGLLYTGGED 228
+DVS GDS V + A ++ CP L TG ED
Sbjct: 636 ------WDVSTGDS--------VRLFLGHTAPVISIAVCPD---------GRWLSTGSED 672
Query: 229 RNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDVRM 288
I WD+ +GK +++ I LS G+ ++ S +D T+R WD++
Sbjct: 673 GIINVWDIGTGKR---LKQMRGHGKNAIYSLSYSKEGN----VLISGGADHTVRVWDLKK 725
Query: 289 AATEKS 294
A TE S
Sbjct: 726 ATTEPS 731
>LI23_CAEEL (Q09990) F-box/WD-repeat protein lin-23 (Abnormal cell
lineage protein 23)
Length = 665
Score = 60.1 bits (144), Expect = 7e-09
Identities = 60/243 (24%), Positives = 108/243 (43%), Gaps = 28/243 (11%)
Query: 53 VASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIF 112
+ SG D+TI ++D S L+ H+ +V L + + R ++S +D ++ ++
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDN-------RVIISGSSDATVRVW 287
Query: 113 DADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCRL----D 168
D + +KTL H + V L + + I +T S+D A+ ++V R R+
Sbjct: 288 DVETGECIKTLIHHCEAV--LHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHR 345
Query: 169 KEASIVRFDVSGDSFFMAV--DEIVNVHQAEDARLLMELQCPKRVLCAAPAKNGLLYTGG 226
++V FD D + ++ D + V + + L +R + + L+ +G
Sbjct: 346 AAVNVVDFD---DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGS 402
Query: 227 EDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDV 286
D I WD+ SG V + E H V+ I DE +V+ A DG I+ WD+
Sbjct: 403 SDNTIRLWDIHSG-VCLRVLEGHEELVRCIRF--------DEKRIVSGAY-DGKIKVWDL 452
Query: 287 RMA 289
+ A
Sbjct: 453 QAA 455
Score = 42.4 bits (98), Expect = 0.002
Identities = 55/291 (18%), Positives = 102/291 (34%), Gaps = 95/291 (32%)
Query: 39 HLSLIKTVAVSNSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSF---------- 88
H + + N V+ SG SD T+ ++D+ T + +L H V L F
Sbjct: 261 HTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTCSK 320
Query: 89 ---------YSPPNLPFPRNLV-----------------SADADGSLAIFDADGFVHLKT 122
SP ++ R LV SA D ++ ++ D ++T
Sbjct: 321 DRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRT 380
Query: 123 LSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDKEASIVRFDVSGDS 182
L+ H++G+ + G++ ++ S D+ + ++ G C R+
Sbjct: 381 LAGHRRGI--ACLQYRGRLVVSGSSDNTIRLWDIHSG---VCLRV--------------- 420
Query: 183 FFMAVDEIVNVHQAEDARLLMELQCPKRVLCAAPAKNGLLYTGGEDRNITAWDLK----- 237
+E+V + ++ R++ +G D I WDL+
Sbjct: 421 -LEGHEELVRCIRFDEKRIV---------------------SGAYDGKIKVWDLQAALDP 458
Query: 238 ---SGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWD 285
S ++ C H RV + + + + S+S D TI WD
Sbjct: 459 RALSSEICLCSLVQHTGRVFRL---------QFDDFQIVSSSHDDTILIWD 500
Score = 37.0 bits (84), Expect = 0.067
Identities = 30/116 (25%), Positives = 52/116 (43%), Gaps = 11/116 (9%)
Query: 9 LVAGSYERFIWGFNLNPNTQTLTPVFSYPSHLSLIKTVAVSNSVVASGGSDDTIHLYDLS 68
+V+ S +R I ++++ TL V + H I + +V SG SD+TI L+D+
Sbjct: 358 IVSASGDRTIKVWSMD----TLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIH 413
Query: 69 TSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLS 124
+ L L H V + F + +VS DG + ++D + + LS
Sbjct: 414 SGVCLRVLEGHEELVRCIRFDE-------KRIVSGAYDGKIKVWDLQAALDPRALS 462
>YL24_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124
Length = 1683
Score = 59.7 bits (143), Expect = 1e-08
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 20/252 (7%)
Query: 39 HLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPF 96
H + +V+ S +ASGGSD TI L+ S + L ++T H TV + ++SP
Sbjct: 1112 HEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNV-YFSPDG--- 1167
Query: 97 PRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNL 156
+NL SA +D S+ ++D L TL+ H GV + P G+ S D + +
Sbjct: 1168 -KNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHR 1226
Query: 157 VRGRRSFCCRLDKE-ASIVRFDVSGDSFFMA-VDEIVNVHQAEDARLLMELQCPKRVLCA 214
G+ ++ + + F G + A D+ + + + D +L+ L+ +
Sbjct: 1227 QDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWD 1286
Query: 215 A--PAKNGLLYTGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLV 272
+ + + D I W+ + H+ V + L D ++
Sbjct: 1287 VNFSSDGKAIASASRDNTIKLWNRHG--IELETFTGHSGGVYAVNFLPDS-------NII 1337
Query: 273 ASASSDGTIRAW 284
ASAS D TIR W
Sbjct: 1338 ASASLDNTIRLW 1349
Score = 51.2 bits (121), Expect = 3e-06
Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 18/240 (7%)
Query: 51 SVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLA 110
S++A+ G+D I L+ S L +L + + + +SF +L + SA+AD ++
Sbjct: 1376 SIIATAGADGNIQLWHSQDGSLLKTLPGNKA-IYGISFTPQGDL-----IASANADKTVK 1429
Query: 111 IFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGR-RSFCCRLDK 169
I+ LKTL H VN + P GK + SRD+ + N+ G+ +
Sbjct: 1430 IWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTD 1489
Query: 170 EASIVRFDVSGDSFFMA-VDEIVNVHQAEDARLLMELQCPKRVLCAA--PAKNGLLYTGG 226
E V F G A D+ + + + L+ L ++ + +L +
Sbjct: 1490 EVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTS 1549
Query: 227 EDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDV 286
D+ + W G + H VV S + D +ASAS D T++ W +
Sbjct: 1550 ADKTVKLWRSHDGHL------LHTFSGHSNVVYSSSFSPDGR--YIASASEDKTVKIWQI 1601
Score = 45.1 bits (105), Expect = 2e-04
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 19/239 (7%)
Query: 50 NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSL 109
++++AS D+TI L+ S L L +S V A+SF ++ + +A ADG++
Sbjct: 1334 SNIIASASLDNTIRLWQRPLISPLEVLAGNSG-VYAVSFLHDGSI-----IATAGADGNI 1387
Query: 110 AIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRR-SFCCRLD 168
++ + LKTL K + ++ P G + + + D + + G+ D
Sbjct: 1388 QLWHSQDGSLLKTLP-GNKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHD 1446
Query: 169 KEASIVRFDVSGDSFFMAV-DEIVNVHQAEDARLLMELQ-CPKRVLCAAPAKNG-LLYTG 225
E + V F G + A D V + D + L+ V + + +G ++ +
Sbjct: 1447 NEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASA 1506
Query: 226 GEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAW 284
D+ I WD SG + + AH V + D + ++AS S+D T++ W
Sbjct: 1507 SADKTIRLWDSFSGNLIKSL-PAHNDLVYSVNFNPDGS-------MLASTSADKTVKLW 1557
Score = 44.3 bits (103), Expect = 4e-04
Identities = 49/242 (20%), Positives = 92/242 (37%), Gaps = 52/242 (21%)
Query: 45 TVAVSNSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSAD 104
+++ +ASG D TI L+ +L H V ++SF P + + S
Sbjct: 1079 SISRDGQTIASGSLDKTIKLWSRD-GRLFRTLNGHEDAVYSVSFS-----PDGQTIASGG 1132
Query: 105 ADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFC 164
+D ++ ++ LKT++ H++ VN++ P GK + S D + + G+
Sbjct: 1133 SDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQ---- 1188
Query: 165 CRLDKEASIVRFDVSGDSFFMAVDEIVNVHQAEDARLLMELQCPKRVLCAAPAKNGLLYT 224
+ ++G S ++ V + D + +
Sbjct: 1189 ---------LLMTLTGHSA-----GVITVRFSPDGQTIA--------------------A 1214
Query: 225 GGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAW 284
G ED+ + W + GK+ + H V + D T +ASAS+D TI+ W
Sbjct: 1215 GSEDKTVKLWHRQDGKLLKTLN-GHQDWVNSLSFSPDGKT-------LASASADKTIKLW 1266
Query: 285 DV 286
+
Sbjct: 1267 RI 1268
Score = 44.3 bits (103), Expect = 4e-04
Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 22/249 (8%)
Query: 53 VASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIF 112
+AS D+TI L++ L + T HS V A++F N+ + SA D ++ ++
Sbjct: 1296 IASASRDNTIKLWNRH-GIELETFTGHSGGVYAVNFLPDSNI-----IASASLDNTIRLW 1349
Query: 113 DADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDKEAS 172
L+ L+ + GV ++ G I T D + + G +K
Sbjct: 1350 QRPLISPLEVLAGNS-GVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIY 1408
Query: 173 IVRFDVSGDSFFMA-VDEIVNVHQAEDARLLMEL----QCPKRVLCAAPAKNGLLYTGGE 227
+ F GD A D+ V + + D + L L +V + K L +
Sbjct: 1409 GISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKT--LASASR 1466
Query: 228 DRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDVR 287
D + W++ GK ++ H V + D ++ASAS+D TIR WD
Sbjct: 1467 DNTVKLWNVSDGKFKKTLK-GHTDEVFWVSFSPDGK-------IIASASADKTIRLWDSF 1518
Query: 288 MAATEKSEP 296
KS P
Sbjct: 1519 SGNLIKSLP 1527
>FW1B_HUMAN (Q9UKB1) F-box/WD-repeat protein 11 (F-box/WD-repeat
protein 1B) (F-box and WD-repeats protein beta-TrCP2)
Length = 542
Score = 57.8 bits (138), Expect = 4e-08
Identities = 62/278 (22%), Positives = 116/278 (41%), Gaps = 32/278 (11%)
Query: 53 VASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIF 112
+ SG D++I ++D ++ L LT H+ +V L + R +V+ +D ++ ++
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE-------RVIVTGSSDSTVRVW 305
Query: 113 DADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCRL----D 168
D + L TL H + V L + S + +T S+D A+ ++ R+
Sbjct: 306 DVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHR 363
Query: 169 KEASIVRFDVSGDSFFMAV--DEIVNVHQAEDARLLMELQCPKRVLCAAPAKNGLLYTGG 226
++V FD D + ++ D + V + L KR + ++ L+ +G
Sbjct: 364 AAVNVVDFD---DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS 420
Query: 227 EDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDV 286
D I WD++ G +E H V+ I + + S + DG I+ WD+
Sbjct: 421 SDNTIRLWDIECGACLRVLE-GHEELVRCIRFDNKR---------IVSGAYDGKIKVWDL 470
Query: 287 RMAATEKSEPLAECKTQSRLTCLAGSSLKCKLKKFEFE 324
+ A +P A T T + S +L+ EF+
Sbjct: 471 QAAL----DPRAPASTLCLRTLVEHSGRVFRLQFDEFQ 504
Score = 36.6 bits (83), Expect = 0.087
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 26 NTQTLTPVFSYPSHLSLIKTVAVSNSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTA 85
+T T V + H I + + +V SG SD+TI L+D+ + L L H V
Sbjct: 389 STSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 448
Query: 86 LSFYSPPNLPFPRNLVSADADGSLAIFD 113
+ F + + +VS DG + ++D
Sbjct: 449 IRFDN-------KRIVSGAYDGKIKVWD 469
Score = 34.3 bits (77), Expect = 0.43
Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 44/176 (25%)
Query: 39 HLSLIKTVAVSNSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFY--------- 89
H + + V+ +G SD T+ ++D++T L +L H+ V L F
Sbjct: 279 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 338
Query: 90 ----------SPPNLPFPRNLV-----------------SADADGSLAIFDADGFVHLKT 122
S ++ R LV SA D ++ ++ ++T
Sbjct: 339 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 398
Query: 123 LSVHKKGV------NDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSF--CCRLDKE 170
L+ HK+G+ + L + S + + C A + ++ G C R D +
Sbjct: 399 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 454
>HET1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1
Length = 1356
Score = 57.4 bits (137), Expect = 5e-08
Identities = 70/272 (25%), Positives = 110/272 (39%), Gaps = 33/272 (12%)
Query: 24 NPNTQTLTPVFSYPSHLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSS 81
N TQTL H S + +VA S VASG D TI ++D ++ + +L H
Sbjct: 831 NACTQTLE------GHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGG 884
Query: 82 TVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKI 141
+V +++F P + S D ++ I+DA +TL H V +A P G+
Sbjct: 885 SVWSVAFS-----PDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQR 939
Query: 142 ALTVSRDSCFAMVNLVRGRRSFCCRLDKE---ASIVRFDVSGDSFFMAV---DEIVNVHQ 195
+ S D + + G C E +S++ S D +A D+ + +
Sbjct: 940 VASGSDDHTIKIWDAASG----TCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWD 995
Query: 196 AEDARLLMELQ-CPKRVLCAAPAKNG-LLYTGGEDRNITAWDLKSGKVAYCIEEAHAARV 253
L+ V A + +G + +G +D+ I WD SG + E H V
Sbjct: 996 TASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTL-EGHGGWV 1054
Query: 254 KGIVVLSDEATGDDEPYLVASASSDGTIRAWD 285
+ +V D VAS S D TI+ WD
Sbjct: 1055 QSVVFSPDGQR-------VASGSDDHTIKIWD 1079
Score = 54.3 bits (129), Expect = 4e-07
Identities = 70/278 (25%), Positives = 105/278 (37%), Gaps = 33/278 (11%)
Query: 18 IWGFNLNPNTQTLTPVFSYPSHLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGS 75
IW TQTL H +++VA S VASG D TI ++D ++ + +
Sbjct: 909 IWDAASGTCTQTLE------GHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQT 962
Query: 76 LTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAI 135
L H S+V +++F P + + S D ++ I+D +TL H V +A
Sbjct: 963 LEGHGSSVLSVAF-----SPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAF 1017
Query: 136 HPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDKE-----ASIVRFDVSGDSFFMAVDE- 189
P G+ + S D + + G C E V F G D+
Sbjct: 1018 SPDGQRVASGSDDKTIKIWDTASG----TCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH 1073
Query: 190 IVNVHQAEDARLLMELQ-CPKRVLCAAPAKNG-LLYTGGEDRNITAWDLKSGKVAYCIEE 247
+ + A L+ V A + +G + +G D I WD SG + E
Sbjct: 1074 TIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTL-E 1132
Query: 248 AHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWD 285
H V + D VAS S DGTI+ WD
Sbjct: 1133 GHGGWVHSVAFSPDGQR-------VASGSIDGTIKIWD 1163
Score = 48.1 bits (113), Expect = 3e-05
Identities = 63/271 (23%), Positives = 96/271 (35%), Gaps = 61/271 (22%)
Query: 18 IWGFNLNPNTQTLTPVFSYPSHLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGS 75
IW TQTL H +++V S VASG D TI ++D + + +
Sbjct: 1035 IWDTASGTCTQTLE------GHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQT 1088
Query: 76 LTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAI 135
L H +V +++F P + + S DG++ I+DA +TL H V+ +A
Sbjct: 1089 LEGHGDSVWSVAFS-----PDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAF 1143
Query: 136 HPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDKEASIVRFDVSGDSFFMAVDEIVNVHQ 195
P G+ + S D + + G + + H
Sbjct: 1144 SPDGQRVASGSIDGTIKIWDAASG--------------------------TCTQTLEGHG 1177
Query: 196 AEDARLLMELQCPKRVLCAAPAKNGLLYTGG-EDRNITAWDLKSGKVAYCIEEAHAARVK 254
V A + +G G D+ I WD SG + E H V+
Sbjct: 1178 G-------------WVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTL-EGHGGWVQ 1223
Query: 255 GIVVLSDEATGDDEPYLVASASSDGTIRAWD 285
+ D VAS SSD TI+ WD
Sbjct: 1224 SVAFSPDGQR-------VASGSSDNTIKIWD 1247
Score = 45.1 bits (105), Expect = 2e-04
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Query: 18 IWGFNLNPNTQTLTPVFSYPSHLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGS 75
IW TQTL H + +VA S VASG D TI ++D ++ + +
Sbjct: 1119 IWDAASGTCTQTLE------GHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQT 1172
Query: 76 LTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAI 135
L H V +++F P + + S +D ++ I+D +TL H V +A
Sbjct: 1173 LEGHGGWVQSVAFS-----PDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAF 1227
Query: 136 HPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDKEASIVRFD 177
P G+ + S D+ + + G + + A+ + FD
Sbjct: 1228 SPDGQRVASGSSDNTIKIWDTASGTCTQTLNVGSTATCLSFD 1269
>PR46_YEAST (Q12417) Pre-mRNA splicing factor PRP46
Length = 451
Score = 57.0 bits (136), Expect = 6e-08
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 36 YPSHLSLIKTVAVSNSV--VASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPN 93
Y HLS ++TV++ ++ +A+ G D I L+D+ T + +L H + +
Sbjct: 220 YYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQC----- 274
Query: 94 LPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSC--- 150
P +VS+ D ++ ++D +K L+ HK+ V A+HP + D
Sbjct: 275 TPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDDIRSW 334
Query: 151 -FAMVNLVRGRRSFCCRLDKEASIVRFDV---SGDSFFMAVDEIVNVHQAED---ARLLM 203
A +L+ S + SI + DV GD+ ++ + + H+ + ++
Sbjct: 335 GLAEGSLLTNFESEKTGIINTLSINQDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVG 394
Query: 204 ELQCPKRVLCAAPAKNGL-LYTGGEDRNITAW 234
L+ + VLC+ K GL L TG D++I W
Sbjct: 395 SLEGERSVLCSTFDKTGLRLITGEADKSIKIW 426
Score = 41.6 bits (96), Expect = 0.003
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 39 HLSLIKTVA---VSNSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTV--TALSFYSPPN 93
HL ++ VA V N +G +D T+ ++DL+T +L H TV A+S P
Sbjct: 138 HLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHP-- 195
Query: 94 LPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDS 149
L S D ++ +D + ++ H GV ++IHP+ + T RDS
Sbjct: 196 -----YLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDS 246
Score = 41.2 bits (95), Expect = 0.004
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 211 VLCAA--PAKNGLLYTGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDE 268
V C A P N TG D + WDL +GK+ + ++ + D A D
Sbjct: 142 VRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTL-------AGHVMTVRDVAVSDRH 194
Query: 269 PYLVASASSDGTIRAWDV 286
PYL S S D T++ WD+
Sbjct: 195 PYLF-SVSEDKTVKCWDL 211
Score = 34.7 bits (78), Expect = 0.33
Identities = 19/74 (25%), Positives = 36/74 (47%), Gaps = 8/74 (10%)
Query: 214 AAPAKNGLLYTGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVA 273
A ++ L++ ED+ + WDL+ ++ + + G+ +S T D L+A
Sbjct: 189 AVSDRHPYLFSVSEDKTVKCWDLEKNQII----RDYYGHLSGVRTVSIHPTLD----LIA 240
Query: 274 SASSDGTIRAWDVR 287
+A D I+ WD+R
Sbjct: 241 TAGRDSVIKLWDMR 254
Score = 30.8 bits (68), Expect = 4.8
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 221 LLYTGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGT 280
L+ T G D I WD+++ ++ H + + + T D V S+S+D T
Sbjct: 238 LIATAGRDSVIKLWDMRT-RIPVITLVGHKGPINQV-----QCTPVDPQ--VVSSSTDAT 289
Query: 281 IRAWDVRMAATEKSEPLAECKTQSRLTCL 309
+R WDV T K L K R T L
Sbjct: 290 VRLWDVVAGKTMK--VLTHHKRSVRATAL 316
>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4 in
chromosome III
Length = 376
Score = 55.8 bits (133), Expect = 1e-07
Identities = 53/231 (22%), Positives = 98/231 (41%), Gaps = 32/231 (13%)
Query: 75 SLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLA 134
+L H+ ++++ F P + L ++ AD ++ I++ D + +TL+ HK GVND+A
Sbjct: 82 TLEGHTKSISSAKFS-----PCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 135 IHPSGKIALTVSRDSCFAMVNLVRGRRS----------FCCRLDKEASIVRFDVSGDSFF 184
+ ++ S D + +V R + FCC + ++S+V VSG
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV---VSG---- 189
Query: 185 MAVDEIVNVHQAEDARLLMELQCPKRVLCAAP--AKNGLLYTGGEDRNITAWDLKSGKVA 242
+ DE V + + + L + A L+ +G D + WD +G+
Sbjct: 190 -SFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ-- 246
Query: 243 YCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDVRMAATEK 293
CI+ + + G Y++AS + D T++ WD T K
Sbjct: 247 -CIKTLVDDENPPVAFVKFSPNG---KYILAS-NLDSTLKLWDFSKGKTLK 292
Score = 45.4 bits (106), Expect = 2e-04
Identities = 45/205 (21%), Positives = 91/205 (43%), Gaps = 19/205 (9%)
Query: 53 VASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIF 112
V S D T+ ++++ TS +L H++ V +F +L +VS D S+ I+
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSL-----VVSGSFDESVRIW 198
Query: 113 DADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCR--LDKE 170
D + +KTL H V+ ++ + G + + S D + + G+ C + +D E
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ---CIKTLVDDE 255
Query: 171 ---ASIVRFDVSGDSFFMA-VDEIVNVHQAEDARLLMEL---QCPKRVLCAAPAKNG--L 221
+ V+F +G + +D + + + L + + K + A + G
Sbjct: 256 NPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKW 315
Query: 222 LYTGGEDRNITAWDLKSGKVAYCIE 246
+ +G ED I W+L++ ++ C+E
Sbjct: 316 IISGSEDCKIYIWNLQTREIVQCLE 340
Score = 45.1 bits (105), Expect = 2e-04
Identities = 31/112 (27%), Positives = 55/112 (48%), Gaps = 6/112 (5%)
Query: 50 NSVVASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSL 109
+S+V SG D+++ ++D+ T + +L HS V+A+SF +L + S DG +
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSL-----IASGSYDGLV 237
Query: 110 AIFDADGFVHLKTL-SVHKKGVNDLAIHPSGKIALTVSRDSCFAMVNLVRGR 160
I+D +KTL V + P+GK L + DS + + +G+
Sbjct: 238 RIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGK 289
>PRP4_ARATH (O22212) Hypothetical Trp-Asp repeats containing protein
At2g41500
Length = 554
Score = 55.1 bits (131), Expect = 2e-07
Identities = 64/240 (26%), Positives = 96/240 (39%), Gaps = 19/240 (7%)
Query: 70 SSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHKKG 129
++++ L DH T + F P L +A AD + ++ DG + L+T H
Sbjct: 288 TNTIAVLKDHKERATDVVFS-----PVDDCLATASADRTAKLWKTDGTL-LQTFEGHLDR 341
Query: 130 VNDLAIHPSGKIALTVSRDSCFAMVNLVRGRRSFCCRLDKEASIVRFDVSGDSFFMA--- 186
+ +A HPSGK T S D + + ++ G + S+ D A
Sbjct: 342 LARVAFHPSGKYLGTTSYDKTWRLWDINTGAE-LLLQEGHSRSVYGIAFQQDGALAASCG 400
Query: 187 VDEIVNVHQAEDARLLMELQCP-KRVLCAAPAKNGL-LYTGGEDRNITAWDLKSGKVAYC 244
+D + V R ++ Q K V + NG L +GGED WDL+ K Y
Sbjct: 401 LDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI 460
Query: 245 IEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRAWDVRMAATEKSEPLAECKTQS 304
I AHA ++S E Y +A+AS D + W R + KS E K S
Sbjct: 461 I-PAHAN------LVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVAS 513
Score = 38.5 bits (88), Expect = 0.023
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 53 VASGGSDDTIHLYDLSTSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIF 112
+ASGG D+ ++DL SL + H++ V+ + Y P F L +A D + I+
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVK-YEPQEGYF---LATASYDMKVNIW 493
Query: 113 DADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRD 148
F +K+L+ H+ V L I TVS D
Sbjct: 494 SGRDFSLVKSLAGHESKVASLDITADSSCIATVSHD 529
>GBLP_LEIMA (Q25306) Guanine nucleotide-binding protein beta
subunit-like protein (Antigen LACK)
Length = 312
Score = 53.9 bits (128), Expect = 5e-07
Identities = 48/212 (22%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 39 HLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTD-HSSTVTALSFYSPPNLP 95
H + VA S + ++ S G D+ I +++++ L D H V+++ F P+L
Sbjct: 106 HTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVAGECMHEFLRDGHEDWVSSICF--SPSLE 163
Query: 96 FPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVN 155
P +VS D ++ +++ +G +TL H V+ + + P G + + +D + +
Sbjct: 164 HPI-VVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWD 222
Query: 156 LVRGRRSFCCRLDKEASIVRFDVSGDSFFM--AVDEIVNVHQAEDARLLMEL-----QCP 208
L G + F +++ E+ I + S + F+M A + ++V+ E ++ EL +
Sbjct: 223 LSTGEQLF--KINVESPINQIGFSPNRFWMCVATERSLSVYDLESKAVIAELTPDGAKPS 280
Query: 209 KRVLCAAPAKNGLLYTGGEDRNITAWDLKSGK 240
+ + A A LY+G +D I W + +
Sbjct: 281 ECISIAWSADGNTLYSGHKDNLIRVWSISDAE 312
Score = 30.4 bits (67), Expect = 6.3
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 224 TGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRA 283
T DR+I WDL++G+ + K ++ ++ + DD L+ SA D IR
Sbjct: 82 TASWDRSIRMWDLRNGQ----CQRKFLKHTKDVLAVA--FSPDDR--LIVSAGRDNVIRV 133
Query: 284 WDV 286
W+V
Sbjct: 134 WNV 136
>TRA7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-)
(TNF receptor associated factor 7)
Length = 594
Score = 53.5 bits (127), Expect = 7e-07
Identities = 41/147 (27%), Positives = 71/147 (47%), Gaps = 14/147 (9%)
Query: 9 LVAGSYERF-IWGFNLNPNTQTLTPVFSYPSHLSLIKTVAVSNSVVASGGSDDTIHLYDL 67
L +GSY+ IW + +TL + + + ++AV+N + G ++ IH++D+
Sbjct: 457 LYSGSYQTIKIW------DIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDI 510
Query: 68 STSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHK 127
+ + +LT H TV AL+ S P+ + SA D SL ++ D + +TL H+
Sbjct: 511 ESKEQVRTLTGHVGTVYALAVISTPD---QTKVFSASYDRSLRVWSMDNMICTQTLLRHQ 567
Query: 128 KGVNDLAIHP----SGKIALTVSRDSC 150
V LA+ SG + TV +C
Sbjct: 568 GSVTALAVSRGRLFSGAVDSTVKVWTC 594
>TRA7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-)
(TNF receptor associated factor 7) (Ring finger and WD
repeat domain 1) (RING finger protein 119)
Length = 670
Score = 53.5 bits (127), Expect = 7e-07
Identities = 41/147 (27%), Positives = 71/147 (47%), Gaps = 14/147 (9%)
Query: 9 LVAGSYERF-IWGFNLNPNTQTLTPVFSYPSHLSLIKTVAVSNSVVASGGSDDTIHLYDL 67
L +GSY+ IW + +TL + + + ++AV+N + G ++ IH++D+
Sbjct: 533 LYSGSYQTIKIW------DIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDI 586
Query: 68 STSSSLGSLTDHSSTVTALSFYSPPNLPFPRNLVSADADGSLAIFDADGFVHLKTLSVHK 127
+ + +LT H TV AL+ S P+ + SA D SL ++ D + +TL H+
Sbjct: 587 ESKEQVRTLTGHVGTVYALAVISTPD---QTKVFSASYDRSLRVWSMDNMICTQTLLRHQ 643
Query: 128 KGVNDLAIHP----SGKIALTVSRDSC 150
V LA+ SG + TV +C
Sbjct: 644 GSVTALAVSRGRLFSGAVDSTVKVWTC 670
>GBLP_LEIIN (P62884) Guanine nucleotide-binding protein beta
subunit-like protein (Antigen LACK) (LiP36) (p36Li)
Length = 312
Score = 53.5 bits (127), Expect = 7e-07
Identities = 48/212 (22%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 39 HLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTD-HSSTVTALSFYSPPNLP 95
H + VA S + ++ S G D+ I +++++ L D H V+++ F P+L
Sbjct: 106 HTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVAGECMHEFLRDGHEDWVSSICF--SPSLE 163
Query: 96 FPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVN 155
P +VS D ++ +++ +G +TL H V+ + + P G + + +D + +
Sbjct: 164 HPI-VVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWD 222
Query: 156 LVRGRRSFCCRLDKEASIVRFDVSGDSFFM--AVDEIVNVHQAEDARLLMEL-----QCP 208
L G + F +++ E+ I + S + F+M A + ++V+ E ++ EL +
Sbjct: 223 LSTGEQLF--KINVESPINQIAFSPNRFWMCVATERSLSVYDLESKAVIAELTPDGAKPS 280
Query: 209 KRVLCAAPAKNGLLYTGGEDRNITAWDLKSGK 240
+ + A A LY+G +D I W + +
Sbjct: 281 ECISIAWSADGNTLYSGHKDNLIRVWSISDAE 312
Score = 30.4 bits (67), Expect = 6.3
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 224 TGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRA 283
T DR+I WDL++G+ + K ++ ++ + DD L+ SA D IR
Sbjct: 82 TASWDRSIRMWDLRNGQ----CQRKFLKHTKDVLAVA--FSPDDR--LIVSAGRDNVIRV 133
Query: 284 WDV 286
W+V
Sbjct: 134 WNV 136
>GBLP_LEICH (P62883) Guanine nucleotide-binding protein beta
subunit-like protein (Antigen LACK)
Length = 312
Score = 53.5 bits (127), Expect = 7e-07
Identities = 48/212 (22%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 39 HLSLIKTVAVS--NSVVASGGSDDTIHLYDLSTSSSLGSLTD-HSSTVTALSFYSPPNLP 95
H + VA S + ++ S G D+ I +++++ L D H V+++ F P+L
Sbjct: 106 HTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVAGECMHEFLRDGHEDWVSSICF--SPSLE 163
Query: 96 FPRNLVSADADGSLAIFDADGFVHLKTLSVHKKGVNDLAIHPSGKIALTVSRDSCFAMVN 155
P +VS D ++ +++ +G +TL H V+ + + P G + + +D + +
Sbjct: 164 HPI-VVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWD 222
Query: 156 LVRGRRSFCCRLDKEASIVRFDVSGDSFFM--AVDEIVNVHQAEDARLLMEL-----QCP 208
L G + F +++ E+ I + S + F+M A + ++V+ E ++ EL +
Sbjct: 223 LSTGEQLF--KINVESPINQIAFSPNRFWMCVATERSLSVYDLESKAVIAELTPDGAKPS 280
Query: 209 KRVLCAAPAKNGLLYTGGEDRNITAWDLKSGK 240
+ + A A LY+G +D I W + +
Sbjct: 281 ECISIAWSADGNTLYSGHKDNLIRVWSISDAE 312
Score = 30.4 bits (67), Expect = 6.3
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 224 TGGEDRNITAWDLKSGKVAYCIEEAHAARVKGIVVLSDEATGDDEPYLVASASSDGTIRA 283
T DR+I WDL++G+ + K ++ ++ + DD L+ SA D IR
Sbjct: 82 TASWDRSIRMWDLRNGQ----CQRKFLKHTKDVLAVA--FSPDDR--LIVSAGRDNVIRV 133
Query: 284 WDV 286
W+V
Sbjct: 134 WNV 136
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,157,613
Number of Sequences: 164201
Number of extensions: 1421598
Number of successful extensions: 5915
Number of sequences better than 10.0: 352
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 256
Number of HSP's that attempted gapping in prelim test: 4353
Number of HSP's gapped (non-prelim): 1317
length of query: 324
length of database: 59,974,054
effective HSP length: 110
effective length of query: 214
effective length of database: 41,911,944
effective search space: 8969156016
effective search space used: 8969156016
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Medicago: description of AC144656.10