BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144592.7 + phase: 0
(129 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATH7_ARATH (P46897) Homeobox-leucine zipper protein ATHB-7 (Home... 149 1e-36
HAT5_ARATH (Q02283) Homeobox-leucine zipper protein HAT5 (HD-ZIP... 109 1e-24
ATH6_ARATH (P46668) Homeobox-leucine zipper protein ATHB-6 (Home... 107 5e-24
ATH5_ARATH (P46667) Homeobox-leucine zipper protein ATHB-5 (HD-Z... 103 9e-23
HAT7_ARATH (Q00466) Homeobox-leucine zipper protein HAT7 (HD-ZIP... 100 6e-22
HAT9_ARATH (P46603) Homeobox-leucine zipper protein HAT9 (Homeod... 70 6e-13
HT22_ARATH (P46604) Homeobox-leucine zipper protein HAT22 (HD-ZI... 67 7e-12
HAT3_ARATH (P46602) Homeobox-leucine zipper protein HAT3 (HD-ZIP... 65 2e-11
HAT4_ARATH (Q05466) Homeobox-leucine zipper protein HAT4 (HD-ZIP... 65 3e-11
HAT1_ARATH (P46600) Homeobox-leucine zipper protein HAT1 (HD-ZIP... 65 3e-11
HT14_ARATH (P46665) Homeobox-leucine zipper protein HAT14 (HD-ZI... 65 3e-11
ATH4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-Z... 65 3e-11
HGL2_ARATH (P46607) Homeobox protein GLABRA2 (Homeobox-leucine z... 64 6e-11
HAT2_ARATH (P46601) Homeobox-leucine zipper protein HAT2 (HD-ZIP... 62 3e-10
BRH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox BarH1 protein) 60 8e-10
GSC_MOUSE (Q02591) Homeobox protein goosecoid 59 1e-09
HMPH_MOUSE (P43120) Homeobox protein PRH (Hematopoietically expr... 58 3e-09
HM1D_DROAN (P22544) Homeobox protein B-H1 58 3e-09
HE1A_BRARE (Q04896) Homeobox protein engrailed-1a (Eng1) 57 7e-09
BRH2_DROME (Q24256) Homeobox B-H2 protein (Homeobox BarH2 protein) 57 7e-09
>ATH7_ARATH (P46897) Homeobox-leucine zipper protein ATHB-7
(Homeodomain transcription factor ATHB-7) (HD-ZIP
protein ATHB-7)
Length = 258
Score = 149 bits (376), Expect = 1e-36
Identities = 74/115 (64%), Positives = 88/115 (76%)
Query: 9 YSAEAGEEETYTTSSISSMRKKKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLAREL 68
YS E + T N +RF+DEQIKSLE MFE+ETRLEPRKK+QLAREL
Sbjct: 7 YSPAMMSAEPFLTMKKMKKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLAREL 66
Query: 69 GLQPRQVAIWFQNKRARWKSKQLEREYNKLQNSYNNLASKFESMKKERQTLLIQV 123
GLQPRQVAIWFQNKRARWKSKQLE EYN L+ +Y+NLAS+FES+KKE+Q L+ ++
Sbjct: 67 GLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSEL 121
>HAT5_ARATH (Q02283) Homeobox-leucine zipper protein HAT5 (HD-ZIP
protein 5) (HD-ZIP protein ATHB-1)
Length = 272
Score = 109 bits (272), Expect = 1e-24
Identities = 49/93 (52%), Positives = 71/93 (75%)
Query: 36 KRFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREY 95
+R T EQ+ LE FETE +LEP +K QLA++LGLQPRQVA+WFQN+RARWK+KQLER+Y
Sbjct: 70 RRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDY 129
Query: 96 NKLQNSYNNLASKFESMKKERQTLLIQVLSIVQ 128
+ L+++Y+ L S ++S+ + L +V S+ +
Sbjct: 130 DLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTE 162
>ATH6_ARATH (P46668) Homeobox-leucine zipper protein ATHB-6
(Homeodomain transcription factor ATHB-6) (HD-ZIP
protein ATHB-6)
Length = 311
Score = 107 bits (267), Expect = 5e-24
Identities = 45/92 (48%), Positives = 73/92 (78%)
Query: 32 NKNTKRFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQL 91
++ +R + Q+K+LE FE E +LEP +K++LA+ELGLQPRQVA+WFQN+RARWK+KQL
Sbjct: 60 SEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 119
Query: 92 EREYNKLQNSYNNLASKFESMKKERQTLLIQV 123
E++Y L+ Y++L F+S++++ ++LL ++
Sbjct: 120 EKDYGVLKTQYDSLRHNFDSLRRDNESLLQEI 151
>ATH5_ARATH (P46667) Homeobox-leucine zipper protein ATHB-5 (HD-ZIP
protein ATHB-5)
Length = 312
Score = 103 bits (256), Expect = 9e-23
Identities = 53/123 (43%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Query: 2 EYSQ-YSSYSAEAGEEETYTTSSISSMRKKKNKNTKRFTDEQIKSLETMFETETRLEPRK 60
+YSQ + + + E+ SS +K + R EQ+K+LE FE + +LEP +
Sbjct: 42 DYSQMFDALEDDGSLEDLGGVGHASSTAAEKKR---RLGVEQVKALEKNFEIDNKLEPER 98
Query: 61 KLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYNKLQNSYNNLASKFESMKKERQTLL 120
K++LA+ELGLQPRQVAIWFQN+RARWK+KQLER+Y L+++++ L +S++++ +LL
Sbjct: 99 KVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLL 158
Query: 121 IQV 123
Q+
Sbjct: 159 GQI 161
>HAT7_ARATH (Q00466) Homeobox-leucine zipper protein HAT7 (HD-ZIP
protein 7) (HD-ZIP protein ATHB-3)
Length = 251
Score = 100 bits (249), Expect = 6e-22
Identities = 49/115 (42%), Positives = 76/115 (65%), Gaps = 3/115 (2%)
Query: 12 EAGEEETYTTSSISSMRKKKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLARELGLQ 71
+ GEE+ + M +K K R EQ+++LE FE +LEP +K+QLA+ LGLQ
Sbjct: 33 QVGEEDNLSDDGSHMMLGEKKK---RLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQ 89
Query: 72 PRQVAIWFQNKRARWKSKQLEREYNKLQNSYNNLASKFESMKKERQTLLIQVLSI 126
PRQ+AIWFQN+RARWK+KQLER+Y+ L+ ++ L S +S+ + L +++++
Sbjct: 90 PRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVAL 144
>HAT9_ARATH (P46603) Homeobox-leucine zipper protein HAT9
(Homeodomain-leucine zipper protein HAT9) (Homeodomain
transcription factor HAT9) (HD-ZIP protein 9)
Length = 274
Score = 70.5 bits (171), Expect = 6e-13
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 12 EAGEEETYTTSSISSMRKKKN----KNTKRFTDEQIKSLETMFETETRLEPRKKLQLARE 67
E+ EEE T IS + + + R T +Q LE F+ + L P++K LAR+
Sbjct: 87 ESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQ 146
Query: 68 LGLQPRQVAIWFQNKRARWKSKQLEREYNKLQNSYNNLASKFESMKKERQTL 119
L L+PRQV +WFQN+RAR K KQ E + L+ LA + ++KE Q L
Sbjct: 147 LNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQEL 198
>HT22_ARATH (P46604) Homeobox-leucine zipper protein HAT22 (HD-ZIP
protein 22)
Length = 278
Score = 67.0 bits (162), Expect = 7e-12
Identities = 37/89 (41%), Positives = 51/89 (56%)
Query: 37 RFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYN 96
R T +Q LE F+ + L P++K LAR+L L+PRQV +WFQN+RAR K KQ E +
Sbjct: 129 RLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 188
Query: 97 KLQNSYNNLASKFESMKKERQTLLIQVLS 125
L+ L + ++KE Q L LS
Sbjct: 189 FLKKCCETLTDENRRLQKELQDLKALKLS 217
>HAT3_ARATH (P46602) Homeobox-leucine zipper protein HAT3 (HD-ZIP
protein 3)
Length = 315
Score = 65.5 bits (158), Expect = 2e-11
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 15 EEETYTTSSISSMRKKKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQ 74
++E + + S RKK R + EQ LE F+ + L P++K+ LA++L L+ RQ
Sbjct: 148 DDEDGSGNGDDSSRKKL-----RLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQ 202
Query: 75 VAIWFQNKRARWKSKQLEREYNKLQNSYNNLASKFESMKKERQTLLIQVLS 125
V +WFQN+RAR K KQ E + L+ NL + ++KE L LS
Sbjct: 203 VEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLS 253
>HAT4_ARATH (Q05466) Homeobox-leucine zipper protein HAT4 (HD-ZIP
protein 4) (HD-ZIP protein ATHB-2)
Length = 284
Score = 65.1 bits (157), Expect = 3e-11
Identities = 42/117 (35%), Positives = 61/117 (51%), Gaps = 5/117 (4%)
Query: 4 SQYSSYSAEAGEEETYT----TSSISSMRKKKNKNTK-RFTDEQIKSLETMFETETRLEP 58
S SS + + E E T + IS N K R + +Q LE F+ + L P
Sbjct: 94 STVSSSTGKRSEREEDTDPQGSRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNP 153
Query: 59 RKKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYNKLQNSYNNLASKFESMKKE 115
++K LA++LGL+ RQV +WFQN+RAR K KQ E + L+ NL + ++KE
Sbjct: 154 KQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKE 210
>HAT1_ARATH (P46600) Homeobox-leucine zipper protein HAT1 (HD-ZIP
protein 1)
Length = 282
Score = 65.1 bits (157), Expect = 3e-11
Identities = 44/119 (36%), Positives = 60/119 (49%), Gaps = 8/119 (6%)
Query: 7 SSYSAEAGEEETYTTSSISSMRKKKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLAR 66
SS + EEE Y + RKK R + +Q LE F+ L P++KL LA+
Sbjct: 116 SSSRGTSDEEEDYGGETC---RKKL-----RLSKDQSAVLEDTFKEHNTLNPKQKLALAK 167
Query: 67 ELGLQPRQVAIWFQNKRARWKSKQLEREYNKLQNSYNNLASKFESMKKERQTLLIQVLS 125
+LGL RQV +WFQN+RAR K KQ E + L+ L + ++KE L LS
Sbjct: 168 KLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLS 226
>HT14_ARATH (P46665) Homeobox-leucine zipper protein HAT14 (HD-ZIP
protein 14)
Length = 225
Score = 64.7 bits (156), Expect = 3e-11
Identities = 32/83 (38%), Positives = 51/83 (60%)
Query: 37 RFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYN 96
R + +Q LE F+ + L P++K+ LA++L L+PRQV +WFQN+RAR K KQ E +
Sbjct: 82 RLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 141
Query: 97 KLQNSYNNLASKFESMKKERQTL 119
L+ +L + ++KE + L
Sbjct: 142 YLKRCCESLTEENRRLQKEVKEL 164
>ATH4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP
protein ATHB-4)
Length = 318
Score = 64.7 bits (156), Expect = 3e-11
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 37 RFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYN 96
R + +Q LE F+ + L P++KL LA++L L+ RQV +WFQN+RAR K KQ E +
Sbjct: 166 RLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCE 225
Query: 97 KLQNSYNNLASKFESMKKERQTLLIQVLS 125
L+ +NL + ++KE L LS
Sbjct: 226 YLKRCCDNLTEENRRLQKEVSELRALKLS 254
>HGL2_ARATH (P46607) Homeobox protein GLABRA2 (Homeobox-leucine
zipper protein ATHB-10) (HD-ZIP protein ATHB-10)
Length = 745
Score = 63.9 bits (154), Expect = 6e-11
Identities = 32/100 (32%), Positives = 56/100 (56%)
Query: 15 EEETYTTSSISSMRKKKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQ 74
EEE + K+K K R T +QI+ +E +F+ + +++ QL+++LGL PRQ
Sbjct: 83 EEEEDGAAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQ 142
Query: 75 VAIWFQNKRARWKSKQLEREYNKLQNSYNNLASKFESMKK 114
V WFQN+R + K+ Q E + L+ L + ++M++
Sbjct: 143 VKFWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRE 182
>HAT2_ARATH (P46601) Homeobox-leucine zipper protein HAT2 (HD-ZIP
protein 2)
Length = 283
Score = 61.6 bits (148), Expect = 3e-10
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 37 RFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYN 96
R + +Q LE F+ L P++KL LA++L L RQV +WFQN+RAR K KQ E +
Sbjct: 133 RLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCE 192
Query: 97 KLQNSYNNLASKFESMKKERQTLLIQVLS 125
L+ L + ++KE L LS
Sbjct: 193 YLKRCVEKLTEENRRLQKEAMELRTLKLS 221
>BRH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox BarH1 protein)
Length = 544
Score = 60.1 bits (144), Expect = 8e-10
Identities = 27/68 (39%), Positives = 43/68 (62%)
Query: 20 TTSSISSMRKKKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWF 79
+TS +S + KK+ K FTD Q+++LE FE + L +++ +LA +L L QV W+
Sbjct: 288 STSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWY 347
Query: 80 QNKRARWK 87
QN+R +WK
Sbjct: 348 QNRRTKWK 355
>GSC_MOUSE (Q02591) Homeobox protein goosecoid
Length = 256
Score = 59.3 bits (142), Expect = 1e-09
Identities = 28/90 (31%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 29 KKKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWFQNKRARW-K 87
++K ++ FTDEQ+++LE +F+ + + QLAR++ L+ +V +WF+N+RA+W +
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 217
Query: 88 SKQLEREYNKLQNSYNNLASKFESMKKERQ 117
K+ E ++ +N +SK K+E +
Sbjct: 218 QKRSSSEESENAEKWNKTSSKASPEKREEE 247
>HMPH_MOUSE (P43120) Homeobox protein PRH (Hematopoietically
expressed homeobox) (Homeobox protein HEX)
Length = 271
Score = 58.2 bits (139), Expect = 3e-09
Identities = 28/81 (34%), Positives = 48/81 (58%)
Query: 30 KKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSK 89
K+ RF+++Q LE FET+ L P ++ +LA+ L L RQV WFQN+RA+W+
Sbjct: 137 KRKGGQVRFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRL 196
Query: 90 QLEREYNKLQNSYNNLASKFE 110
+ E + +++ ++L + E
Sbjct: 197 KQENPQSNKKDALDSLDTSCE 217
>HM1D_DROAN (P22544) Homeobox protein B-H1
Length = 606
Score = 58.2 bits (139), Expect = 3e-09
Identities = 26/67 (38%), Positives = 42/67 (61%)
Query: 20 TTSSISSMRKKKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWF 79
+TS +S + KK+ K FTD Q+++LE FE + L +++ +LA +L L QV W+
Sbjct: 320 STSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWY 379
Query: 80 QNKRARW 86
QN+R +W
Sbjct: 380 QNRRTKW 386
>HE1A_BRARE (Q04896) Homeobox protein engrailed-1a (Eng1)
Length = 231
Score = 57.0 bits (136), Expect = 7e-09
Identities = 30/67 (44%), Positives = 41/67 (60%), Gaps = 8/67 (11%)
Query: 29 KKKNKNTKR--------FTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWFQ 80
KKKN NT+ FT EQ++ L+ F+T + +++ LARELGL Q+ IWFQ
Sbjct: 133 KKKNNNTESDDKRPRTAFTAEQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWFQ 192
Query: 81 NKRARWK 87
NKRA+ K
Sbjct: 193 NKRAKIK 199
>BRH2_DROME (Q24256) Homeobox B-H2 protein (Homeobox BarH2 protein)
Length = 645
Score = 57.0 bits (136), Expect = 7e-09
Identities = 28/78 (35%), Positives = 47/78 (59%), Gaps = 3/78 (3%)
Query: 10 SAEAGEEETYTTSSISSMRKKKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLARELG 69
S+ G+ ++ + S+S KK+ K FTD Q+++LE FE + L + +++LA +L
Sbjct: 362 SSANGDSSSHLSLSLS---KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLE 418
Query: 70 LQPRQVAIWFQNKRARWK 87
L QV W+QN+R +WK
Sbjct: 419 LSDCQVKTWYQNRRTKWK 436
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.310 0.123 0.324
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,758,424
Number of Sequences: 164201
Number of extensions: 441362
Number of successful extensions: 3256
Number of sequences better than 10.0: 1026
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 183
Number of HSP's that attempted gapping in prelim test: 2316
Number of HSP's gapped (non-prelim): 1125
length of query: 129
length of database: 59,974,054
effective HSP length: 105
effective length of query: 24
effective length of database: 42,732,949
effective search space: 1025590776
effective search space used: 1025590776
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144592.7