BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144564.13 - phase: 0
(740 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ISP4_SCHPO (P40900) Sexual differentiation process protein isp4 523 e-148
YJV2_YEAST (P40897) Hypothetical 91.6 kDa protein in HXT8-CRT1 i... 444 e-124
YGL4_YEAST (P53134) Hypothetical 80.0 kDa protein in SNF4-TAF60 ... 47 2e-04
YC43_ODOSI (P49538) Hypothetical 30.1 kDa protein ycf43 (ORF263) 36 0.42
NU1M_ARATH (P92558) NADH-ubiquinone oxidoreductase chain 1 (EC 1... 35 0.93
CHSD_ASPFU (P78746) Chitin synthase D (EC 2.4.1.16) (Chitin-UDP ... 34 1.2
XPO1_SCHPO (P14068) Exportin 1 (Chromosome region maintenance pr... 33 2.7
NU1M_OENBE (P31839) NADH-ubiquinone oxidoreductase chain 1 (EC 1... 33 2.7
NU2M_CHOCR (P48903) NADH-ubiquinone oxidoreductase chain 2 (EC 1... 33 3.6
Y561_HAEIN (P44016) Hypothetical protein HI0561 32 4.6
NU1M_MARPO (P26845) NADH-ubiquinone oxidoreductase chain 1 (EC 1... 32 4.6
YH98_ARCFU (O28476) Putative phosphate permease AF1798 32 6.1
SECD_SALCH (Q9ZFF8) Protein-export membrane protein secD 32 6.1
ROST_DROME (O44252) Rolling stone protein 32 6.1
POT1_ARATH (O22397) Potassium transporter 1 (AtPOT1) (AtKUP1) (A... 32 6.1
GAB3_DROME (Q08832) Gamma-aminobutyric-acid receptor beta-like s... 32 7.9
>ISP4_SCHPO (P40900) Sexual differentiation process protein isp4
Length = 785
Score = 523 bits (1347), Expect = e-148
Identities = 272/731 (37%), Positives = 416/731 (56%), Gaps = 23/731 (3%)
Query: 6 VDTEKGTMKEEEE-EEESPIEEVRLTVKKTDDPTLPVWTFRMWFLGLLSCALLSFLNQFF 64
+D E G + +E EE+SP EVR V TDDP++P T RMW +GL+ + + +N FF
Sbjct: 53 LDVEHGEISTVDEFEEDSPYPEVRAAVPPTDDPSMPCNTIRMWTIGLIYSTVGAAVNMFF 112
Query: 65 AYRTEPLIITQITVQVATLPLGHLMASVLPSKTFRIPGFGSKRFSFNPGPFNMKEHVLIT 124
+ R + ++ + ++ P + + P + FRI G +F+F PGPFN+KEH LI
Sbjct: 113 SLRNPTVTLSVLISELLAYPALQIWDLIFPDREFRI---GRLKFNFKPGPFNVKEHALIV 169
Query: 125 IFANAGAAFGSGSSYAVGIVNIIKAFYGRNISFLAAWLLIITTQVLGYGWAGLLRKYVVE 184
+ ++ G++Y+ I+ + Y + F L + TQ++GYG AGL R+ +V
Sbjct: 170 VMSSVSF----GNAYSTDIILAQRVHYKQRFGFGYEICLTLATQLIGYGLAGLSRRLLVR 225
Query: 185 PAHMWWPGTLVQVSLFRTLHEKD-----DNPHQFSRAKFFFIALVCSFTWYIVPGYLFTT 239
PA M WP LVQ +L +TLH KD N + S +FF + SF W P Y+F
Sbjct: 226 PASMLWPVNLVQCTLIKTLHRKDLRNAVANGWRISPFRFFLYVFIASFIWNWFPSYIFQA 285
Query: 240 LTSISWVCWVFSKSVTAQQIGSGMNGLGLGALTLDWSAVASFLFSPLISPFFAIVNVFVG 299
L+ +WV W+ S T QI G+ + +T DW+ +++++ SPL++P A++N+ +G
Sbjct: 286 LSLFAWVTWIRPNSPTVNQIFGESTGISILPMTFDWNQISAYILSPLMAPADALMNILLG 345
Query: 300 YALLVYAVIPIAYWGFNVYGANRFSIFSSDLYTAQGQPYNISNIVNDKFEIDLAKYHEQG 359
L + V P + YG + I SS + G YN++ I+ DL Y
Sbjct: 346 VILFFWIVTPALNFTNTWYG-DYLPISSSGIIDHFGNSYNVTRILTKDATFDLDAYQNYS 404
Query: 360 RIHLSTFFALSYGFGFATIASTVTHVACFYGREIMERYRASKNGKEDIHTKLMKNYKDIP 419
I +ST +AL++G FA+I S + HV ++G+EI +R R DIH KLMK Y ++P
Sbjct: 405 PIFMSTTYALAFGLSFASITSVIFHVILYHGKEIYDRLRDPP--APDIHEKLMKAYDEVP 462
Query: 420 SWWFYLLLGVTFVVSLMICIFLNDQIQMPWWGLLIASALAFIFTLPISIITATTNQTPGL 479
+W YL + + F +M I+ + + PWW +++ + ++ +PI I+ A TN GL
Sbjct: 463 FYW-YLSVFLAFFGMMMGTIY-GWKTETPWWVIIVGVIFSAVWFIPIGIVQAITNIQLGL 520
Query: 480 NIITEYIFGIIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIG 539
N+ TE+I G +YPGRP+A + FKT GYI+M Q ++F +D K GHYMK+PPR MF Q I
Sbjct: 521 NVFTEFIVGYMYPGRPLAMMIFKTVGYITMTQGLAFAADLKFGHYMKLPPRIMFYTQMIA 580
Query: 540 TVLAGTINIGVAWWLLDSVKNICNKDLLPKGSPWTCPSDRVFFDASVVWGLVGPKRIFGS 599
T+ + + IGV W L ++ N+C D + +TCP+ VFF++SV+WG++GPKR+F
Sbjct: 581 TIWSCFVQIGVLDWALGNIDNVCQAD---QPDNYTCPNATVFFNSSVIWGVIGPKRMFSG 637
Query: 600 LGEYSTLNWFFLGGAIGPILVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATALNYNSW 659
Y+ L +F+L G +G IL W L K +P Q W +N P++ G TG +PPAT +NY +W
Sbjct: 638 KNTYTGLQYFWLAGVLGTILFWALWKKWP-QKWWGQLNGPLIFGGTGYIPPATPVNYLAW 696
Query: 660 IIVGTIFNFFIFRYRKKWWQRYNYVLSAALDAGVAFMAVLLYLALGLENVSL-NWWGTAG 718
+G FN+++ + WWQ+YN+ LSAALD G ++L+ L L V+ +WWG G
Sbjct: 697 SGIGLFFNYYLKKIFADWWQKYNFTLSAALDTGTQLSVIILFFCLQLPMVNFPDWWGNDG 756
Query: 719 EHCPLAACPTA 729
L A A
Sbjct: 757 AFNTLDATGAA 767
>YJV2_YEAST (P40897) Hypothetical 91.6 kDa protein in HXT8-CRT1
intergenic region
Length = 799
Score = 444 bits (1142), Expect = e-124
Identities = 250/707 (35%), Positives = 385/707 (54%), Gaps = 35/707 (4%)
Query: 22 SPIEEVRLTVKKTDDPTLPVWTFRMWFLGLLSCALLSFLNQFFAYRTEPLIITQITVQVA 81
SP EVR V DDPT+ + +R WFL + + + +NQFF+ R L I + QV
Sbjct: 85 SPYPEVRSAVSIEDDPTIRLNHWRTWFLTTVFVVVFAGVNQFFSLRYPSLEINFLVAQVV 144
Query: 82 TLPLGHLMASVLPSKTFRIPGFGSKRFSFNPGPFNMKEHVLITIFANAGAAFGSGSSYAV 141
P+G ++A + K ++P F NPGPF KEH ++TI A S ++YA+
Sbjct: 145 CYPIGRILALLPDWKCSKVPFF-----DLNPGPFTKKEHAVVTI----AVALTSSTAYAM 195
Query: 142 GIVNIIKAFYGRNISFLAAWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPGTLVQVSLFR 201
I+N +FY ++ +LL+ T+Q++GYG AGL R++VV PA WP TL+ VSLF
Sbjct: 196 YILNAQGSFYNMKLNVGYQFLLVWTSQMIGYGAAGLTRRWVVNPASSIWPQTLISVSLFD 255
Query: 202 TLHEKD-----DNPHQFSRAKFFFIALVCSFTWYIVPGYLFTTLTSISWVCWVFSK--SV 254
+LH + N R +FF I L+ SF WY VPG+LFT L+ + + W +
Sbjct: 256 SLHSRKVEKTVANGWTMPRYRFFLIVLIGSFIWYWVPGFLFTGLSYFNVILWGSKTRHNF 315
Query: 255 TAQQIGSGMNGLGLGALTLDWSAVASFLF-SPLISPFFAIVNVFVGYALLVYAVIPIAYW 313
A I +GLG +T D++ V+ + S +PF+ N + + V+P Y+
Sbjct: 316 IANTIFGTQSGLGALPITFDYTQVSQAMSGSVFATPFYVSANTYASVLIFFVIVLPCLYF 375
Query: 314 GFNVYGANRFSIFSSDLYTAQGQPYNISNIVNDKFEIDLAKYHEQGRIHLSTFFALSYGF 373
N + A + S Y YN++ I+N+ + I+L KY E + + + LSY
Sbjct: 376 T-NTWYAKYMPVISGSTYDNTQNKYNVTKILNEDYSINLEKYKEYSPVFVPFSYLLSYAL 434
Query: 374 GFATIASTVTHVACFYGREIMERYRASKNGKEDIHTKLM-KNYKDIPSWWFYLL----LG 428
FA + + H ++G++I+ +++ KNG DIH ++ KNYKD P WW+ LL +G
Sbjct: 435 NFAAVIAVFVHCILYHGKDIVAKFKDRKNGGTDIHMRIYSKNYKDCPDWWYLLLQIVMIG 494
Query: 429 VTFVVSLMICIFLNDQIQMPWWGLLIASALAFIFTLPISIITATTNQTPGLNIITEYIFG 488
+ FV +C F + P W +IA ++ + +P I+ A TNQ GLNIITE I G
Sbjct: 495 LGFVA---VCCF---DTKFPAWAFVIAILISLVNFIPQGILEAMTNQHVGLNIITELICG 548
Query: 489 IIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTVLAGTINI 548
+ P RP+AN+ FK YG+I M Q ++ D KL YMK+ PR +F VQ T+++G +N+
Sbjct: 549 YMLPLRPMANLLFKLYGFIVMRQGLNLSRDLKLAMYMKVSPRLIFAVQIYATIISGMVNV 608
Query: 549 GVAWWLLDSVKNICNKDLLPKGSPWTCPSDRVFFDASVVWGLVGPKRIFGSLGEYSTLNW 608
GV W++ ++ +C D P G +TC + R F+AS++W L PK +F S Y+ L W
Sbjct: 609 GVQEWMMHNIDGLCTTD-QPNG--FTCANGRTVFNASIIWSL--PKYLFSSGRIYNPLMW 663
Query: 609 FFLGGAIGPILVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATALNYNSWIIVGTIFNF 668
FFL G + P+ V+ + FPK + I+ PV G +PP+T NY+ + + N
Sbjct: 664 FFLIGLLFPLAVYAVQWKFPKFKFAKHIHTPVFFTGPGNIPPSTPYNYSLFFAMSFCLNL 723
Query: 669 FIFRYRKKWWQRYNYVLSAALDAGVAFMAVLLYLALGLENVSLNWWG 715
R+R W+ +YN+V+ A ++AGVA V+++L + L+WWG
Sbjct: 724 IRKRWR-AWFNKYNFVMGAGVEAGVAISVVIIFLCVQYPGGKLSWWG 769
>YGL4_YEAST (P53134) Hypothetical 80.0 kDa protein in SNF4-TAF60
intergenic region
Length = 725
Score = 47.0 bits (110), Expect = 2e-04
Identities = 48/197 (24%), Positives = 83/197 (41%), Gaps = 30/197 (15%)
Query: 400 SKNGKEDIHTKLMKNYKDIPSWWFYLLLGVTFVVSLMICIFLNDQIQMPWWGLLIASALA 459
S++ + ++ +K + Y + S V+ ++ ++ I+L +P + ++ A LA
Sbjct: 430 SRDNEIEVDSKHLVRYTTVISGCL-----VSSIICIVSIIYLFGIQVIPLYAIITALILA 484
Query: 460 -FIFTLPISIITATT-NQTPGLNIITEYIFGIIYP----GRPIANVCFKTYGYISMAQAV 513
F+ L I + T N G+ I++ IF I P G + NV S QA
Sbjct: 485 LFLSILGIRALGETDLNPVSGIGKISQLIFAFIIPRDRPGSVLMNVVSGGIAEASAQQAG 544
Query: 514 SFLSDFKLGHYMKIPPRSMFLVQFIGTVLAGTINIGVAWW--LLDSVKNICNKDLLPKGS 571
+ D K GH + PR+ F Q IG A W +L S +C +
Sbjct: 545 DLMQDLKTGHLLGASPRAQFCAQLIG-----------ACWSIILSSFMYLCYNKV----- 588
Query: 572 PWTCPSDRVFFDASVVW 588
++ PS++ +VVW
Sbjct: 589 -YSIPSEQFRIPTAVVW 604
>YC43_ODOSI (P49538) Hypothetical 30.1 kDa protein ycf43 (ORF263)
Length = 263
Score = 35.8 bits (81), Expect = 0.42
Identities = 33/127 (25%), Positives = 57/127 (43%), Gaps = 13/127 (10%)
Query: 591 VGPKRIFGSLGEYSTLNWFFLGG--AIGPILVWLLHKAFPKQSWIPLINLPVLLGATGMM 648
+ P F S + S F G AIG I+++LL K++ I LP+LL + G+
Sbjct: 86 LSPGEYFVSTVKISFYTGFLFGSPFAIGQIILFLLPGLTKKET---KIILPLLLSSLGLF 142
Query: 649 PPATALNYNSWIIVGTIFNFFIF---RYRKKWW---QRYNYVLSAALDAGVAFMAVLLYL 702
+Y + ++ NFF+ + W Q + ++L G+AF ++ +
Sbjct: 143 GFGLVFSY--YALIPAALNFFLNYSDEVIEPLWSFDQYFEFILVLFYSTGLAFQIPIIQI 200
Query: 703 ALGLENV 709
LGL N+
Sbjct: 201 LLGLLNI 207
>NU1M_ARATH (P92558) NADH-ubiquinone oxidoreductase chain 1 (EC
1.6.5.3)
Length = 325
Score = 34.7 bits (78), Expect = 0.93
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 602 EYSTLNW--FFLGGAIGPILVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATALNYNSW 659
EYS++ + FFLG IL+ L F W+P+++LP+ G + W
Sbjct: 219 EYSSMGFALFFLGEYANMILMSGLCTLFFLGGWLPILDLPIFKKIPGSI----------W 268
Query: 660 IIVGTIFNFFIFRYRKKWWQRYNY 683
+ +F F++ + + + RY Y
Sbjct: 269 FSIKVLFFLFLYIWVRAAFPRYRY 292
>CHSD_ASPFU (P78746) Chitin synthase D (EC 2.4.1.16) (Chitin-UDP
acetyl-glucosaminyl transferase D) (Class-VI chitin
synthase D)
Length = 745
Score = 34.3 bits (77), Expect = 1.2
Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 251 SKSVTAQQIGSGMNGLGLGALTLDWSAVASFLFSPLISPFFAIVNVFVGYALLVYAVIPI 310
S S+ +G LGL + + + + + P I+N F + +VY ++
Sbjct: 428 SSSINDLPVGFIAISLGLNYVLMFYLGAKLKRYKAWLFPLMFILNPFFNWLYMVYGILTA 487
Query: 311 AYWGFNVYGANRFSIFSSDLYTAQGQPYNISNIVNDKFEIDLAKYHEQG 359
G +G R ++D +T+ + ++ D+ +DL + +G
Sbjct: 488 ---GQRTWGGPRADAATADEHTSPEEAVELAKAQGDELNVDLTTFRSRG 533
>XPO1_SCHPO (P14068) Exportin 1 (Chromosome region maintenance
protein 1) (Caffeine resistance protein 2)
Length = 1078
Score = 33.1 bits (74), Expect = 2.7
Identities = 24/67 (35%), Positives = 37/67 (54%), Gaps = 6/67 (8%)
Query: 475 QTPGLNIITEYIFGIIYPGRPIANVCFKTYGYISMAQAVSFL---SDFKLGHYMK--IPP 529
Q GLNI+ E I + G ++N F+TY YIS+ Q + ++ SD K G ++ I
Sbjct: 891 QETGLNILLELINNMASMGPDVSNAFFQTY-YISLLQDILYVLTDSDHKSGFKLQSLILA 949
Query: 530 RSMFLVQ 536
R +LV+
Sbjct: 950 RLFYLVE 956
>NU1M_OENBE (P31839) NADH-ubiquinone oxidoreductase chain 1 (EC
1.6.5.3)
Length = 331
Score = 33.1 bits (74), Expect = 2.7
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 602 EYSTLNW--FFLGGAIGPILVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATALNYNSW 659
EYS++ + FFLG IL+ L W+P+++LP+ G + W
Sbjct: 225 EYSSMGFALFFLGEYANMILMSGLCTLLFLGGWLPILDLPIFKKIPGSI----------W 274
Query: 660 IIVGTIFNFFIFRYRKKWWQRYNY 683
+ IF F++ + + + RY Y
Sbjct: 275 FSIKVIFFLFLYIWVRAAFPRYRY 298
>NU2M_CHOCR (P48903) NADH-ubiquinone oxidoreductase chain 2 (EC
1.6.5.3)
Length = 497
Score = 32.7 bits (73), Expect = 3.6
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 34/174 (19%)
Query: 43 TFRMWFLGLLSCALLSFLNQFFAYRTEPLIITQITVQVATLPLGHLMASVLPSKTFRIPG 102
+F W L LL+ + F+ Q + L+ ++++ +L + +++AS + F
Sbjct: 111 SFEYWILILLAIVAILFIIQSY-----DLLTMYLSIEFQSL-IFYILASFKRTSEFSTEA 164
Query: 103 FGSKRFSFNPGPFNMKEHVLITIFANAGAAFGSGSSYAV-GIVNII---KAFYGRNISFL 158
G K F ++ F++ FGS Y + G+ N + K F G + L
Sbjct: 165 -GLKYF-------------VLGAFSSGLLLFGSSLIYGLTGLTNFLDLAKFFTGMPMLEL 210
Query: 159 AAWLLIIT--TQVLGYGWAGLLRKYVVEPAHMWWP----GTLVQVSLFRTLHEK 206
++W+ + T T +L LL K P HMW P G+ ++LF ++ K
Sbjct: 211 SSWIGLTTGFTLIL----VSLLFKLSAAPFHMWAPDVYEGSPTSITLFFSIMPK 260
>Y561_HAEIN (P44016) Hypothetical protein HI0561
Length = 633
Score = 32.3 bits (72), Expect = 4.6
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 23/133 (17%)
Query: 606 LNWFFLGGAIGPILVWLLHKAFPKQSWIPLINLPVLLGATGM-MPPATALNYNSWIIVGT 664
L W ++ +G V + AF K+ + +LPV+ G+ +PP + N+ +IVG
Sbjct: 481 LEWTYILTGVGLGAVLITIDAFLKKVSNKVFSLPVIAVGIGIYLPP----SINTPVIVGA 536
Query: 665 IFNFFIFRYRKKWW--------QRYNYVLSAALDAGVAFMAVLLYLALGLE--------- 707
+ + R+ K +R+ + SA L G + M V+L +
Sbjct: 537 FLAWIMARHIAKLGNKEVSAKAERFGTLFSAGLIVGESLMGVILAFIIAASVTTGGSEAP 596
Query: 708 -NVSLNWWGTAGE 719
+++L W T GE
Sbjct: 597 LSLNLENWDTIGE 609
>NU1M_MARPO (P26845) NADH-ubiquinone oxidoreductase chain 1 (EC
1.6.5.3)
Length = 328
Score = 32.3 bits (72), Expect = 4.6
Identities = 20/84 (23%), Positives = 38/84 (44%), Gaps = 12/84 (14%)
Query: 602 EYSTLNW--FFLGGAIGPILVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATALNYNSW 659
EYS++ + FFLG IL+ L W+P++++P+ G + W
Sbjct: 222 EYSSMGFALFFLGEYANMILMSSLCTLLFLGGWLPILDIPIFQVIPGSI----------W 271
Query: 660 IIVGTIFNFFIFRYRKKWWQRYNY 683
+ +F F++ + + + RY Y
Sbjct: 272 FSIKVLFFLFVYIWVRAAFPRYRY 295
>YH98_ARCFU (O28476) Putative phosphate permease AF1798
Length = 333
Score = 32.0 bits (71), Expect = 6.1
Identities = 21/85 (24%), Positives = 37/85 (42%), Gaps = 11/85 (12%)
Query: 222 ALVCSFTWYIVPGYLFTTLTSISWVCWVFSKSVTAQQIGSGMNGLGLGALTLD---WSAV 278
AL+ + W + Y +++ + S+ +G G+ + LTLD W +
Sbjct: 87 ALLSAGFWITISTYYHLPIST--------THSIVGAMVGFGLAAVSQNHLTLDQIKWDVL 138
Query: 279 ASFLFSPLISPFFAIVNVFVGYALL 303
A S +ISP F FV ++L+
Sbjct: 139 ARIALSWVISPLFGAALAFVVFSLI 163
>SECD_SALCH (Q9ZFF8) Protein-export membrane protein secD
Length = 615
Score = 32.0 bits (71), Expect = 6.1
Identities = 22/79 (27%), Positives = 37/79 (45%), Gaps = 2/79 (2%)
Query: 24 IEEVRLTVKKTDDPTLPVWTFRMWFLGLLSCALLSFLNQFFAYRTEPLIITQITVQVATL 83
I +++ ++T PTL + + L+ ++S L F Y+ LI T V L
Sbjct: 430 IAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIATSALVANLVL 489
Query: 84 PLGHLMASVLPSKTFRIPG 102
+G + S+LP T +PG
Sbjct: 490 IVG--IMSLLPGATLSMPG 506
>ROST_DROME (O44252) Rolling stone protein
Length = 275
Score = 32.0 bits (71), Expect = 6.1
Identities = 19/85 (22%), Positives = 41/85 (47%), Gaps = 8/85 (9%)
Query: 367 FALSYGFGFATIASTVT--HVACFYGREIMERYRASKNGKEDIHTKLMKNYKDIPSWWFY 424
+ ++GFG TI ++ V C++ R ++G + ++ +K Y WW Y
Sbjct: 75 YMTNWGFGLCTITMLISAVQVTCWHFDVRSTRSLVQESGHKAETSRGLKIY-----WWLY 129
Query: 425 -LLLGVTFVVSLMICIFLNDQIQMP 448
+ L + ++S + +FL+ ++ P
Sbjct: 130 NMTLSLALIISTVYWVFLHGKMNKP 154
>POT1_ARATH (O22397) Potassium transporter 1 (AtPOT1) (AtKUP1)
(AtKT1)
Length = 712
Score = 32.0 bits (71), Expect = 6.1
Identities = 22/93 (23%), Positives = 43/93 (45%), Gaps = 8/93 (8%)
Query: 580 VFFDASVVWGLVGPKRIFGSLGEYSTLNWF-FLGGAIGPILVWLLHKAFPKQSWIPLINL 638
+F S W L S+G Y+T+ W + A+ P+ ++ ++ + W+ L
Sbjct: 223 IFAPISTAWLLS-----ISSIGVYNTIKWNPRIVSALSPVYMYKFLRSTGVEGWVSLGG- 276
Query: 639 PVLLGATGMMPPATALNYNSWIIVGTIFNFFIF 671
V+L TG+ L + S + + F+FF++
Sbjct: 277 -VVLSITGVETMFADLGHFSSLSIKVAFSFFVY 308
>GAB3_DROME (Q08832) Gamma-aminobutyric-acid receptor beta-like
subunit precursor (GABA(A) receptor)
Length = 496
Score = 31.6 bits (70), Expect = 7.9
Identities = 36/164 (21%), Positives = 68/164 (40%), Gaps = 23/164 (14%)
Query: 166 TTQVLGYGWAGLLRKYVVEPAHMWWPGTLV------QVSLFRTL-HEKDDNPHQFSRAKF 218
T ++ YG Y V M+W T V ++ F + +E +D + + +
Sbjct: 191 TVEIESYG-------YTVSDVVMYWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVY 243
Query: 219 FFIALVCSFT----WYIVPGYLFTTL-TSISWVCWVFSKSVTAQQIGSGMNGLGLGALTL 273
++L +++ YL + L +SWV + + T+ ++ G+ + L T+
Sbjct: 244 QRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV-LTMTTI 302
Query: 274 DW---SAVASFLFSPLISPFFAIVNVFVGYALLVYAVIPIAYWG 314
S++ + I + + VFV ALL YA + YWG
Sbjct: 303 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWG 346
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.327 0.142 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,590,359
Number of Sequences: 164201
Number of extensions: 3951116
Number of successful extensions: 14790
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 14767
Number of HSP's gapped (non-prelim): 19
length of query: 740
length of database: 59,974,054
effective HSP length: 118
effective length of query: 622
effective length of database: 40,598,336
effective search space: 25252164992
effective search space used: 25252164992
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 70 (31.6 bits)
Medicago: description of AC144564.13