BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144541.1 - phase: 0
(124 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
R22C_ARATH (Q9FE58) 60S ribosomal protein L22-3 224 2e-59
R22B_ARATH (Q9M9W1) 60S ribosomal protein L22-2 224 3e-59
R22A_ARATH (Q9SRX7) 60S ribosomal protein L22-1 171 3e-43
RL22_RAT (P47198) 60S ribosomal protein L22 152 2e-37
RL22_PIG (P67985) 60S ribosomal protein L22 (Heparin binding pro... 151 3e-37
RL22_MOUSE (P67984) 60S ribosomal protein L22 (Heparin binding p... 151 3e-37
RL22_HUMAN (P35268) 60S ribosomal protein L22 (Epstein-Barr viru... 150 6e-37
RL22_TRIGR (P13732) 60S ribosomal protein L22 (Development-speci... 148 2e-36
RL22_XENLA (P50886) 60S ribosomal protein L22 145 2e-35
RL22_GADMO (P52865) 60S ribosomal protein L22 (Fragment) 137 3e-33
RL22_DROME (P50887) 60S ribosomal protein L22 134 5e-32
RL22_SCHPO (Q09668) 60S ribosomal protein L22 119 1e-27
RL22_CAEEL (P52819) 60S ribosomal protein L22 116 1e-26
R22A_YEAST (P05749) 60S ribosomal protein L22-A (YL31) (RP4) 105 2e-23
R22B_YEAST (P56628) 60S ribosomal protein L22-B 99 2e-21
TRXB_RICPR (Q9ZD97) Thioredoxin reductase (EC 1.8.1.9) (TRXR) 32 0.25
RADC_PASMU (P57913) DNA repair protein radC homolog 31 0.43
GALE_HAEIN (P24325) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 31 0.43
14P_ARATH (O64628) UPF0071 protein At2g18990 29 2.1
YEF1_YEAST (P32622) Hypothetical 55.9 kDa protein in GDA1-UTR2 i... 28 2.8
>R22C_ARATH (Q9FE58) 60S ribosomal protein L22-3
Length = 124
Score = 224 bits (572), Expect = 2e-59
Identities = 109/124 (87%), Positives = 119/124 (95%)
Query: 1 MSRGSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVT 60
MSRG+AA AKGKKKG +FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVS+T
Sbjct: 1 MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60
Query: 61 REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 120
REKSKITVT+D FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDR++YELRYFNIAENE
Sbjct: 61 REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120
Query: 121 EEED 124
EEED
Sbjct: 121 EEED 124
>R22B_ARATH (Q9M9W1) 60S ribosomal protein L22-2
Length = 124
Score = 224 bits (571), Expect = 3e-59
Identities = 109/124 (87%), Positives = 119/124 (95%)
Query: 1 MSRGSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVT 60
MSRG AA AKGKKKG +FTIDC+KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSV++T
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60
Query: 61 REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 120
REKSKITVT+D FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDR++YELRYFNIAENEG
Sbjct: 61 REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120
Query: 121 EEED 124
EEED
Sbjct: 121 EEED 124
>R22A_ARATH (Q9SRX7) 60S ribosomal protein L22-1
Length = 127
Score = 171 bits (432), Expect = 3e-43
Identities = 81/119 (68%), Positives = 101/119 (84%)
Query: 6 AAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVTREKSK 65
++GA KKKG +F IDC+KPV+D I++IA+LEKFLQERIKV GKAGALG+SVS+TR K
Sbjct: 8 SSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGK 67
Query: 66 ITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
I V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+++YE+RYF I + E+
Sbjct: 68 INVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEE 126
>RL22_RAT (P47198) 60S ribosomal protein L22
Length = 127
Score = 152 bits (383), Expect = 2e-37
Identities = 79/120 (65%), Positives = 94/120 (77%), Gaps = 3/120 (2%)
Query: 6 AAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSV-SVTREKS 64
A G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG LG V ++ R KS
Sbjct: 8 AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKS 67
Query: 65 KITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
KITVTS+ FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+ YELRYF I ++E EEED
Sbjct: 68 KITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 125
>RL22_PIG (P67985) 60S ribosomal protein L22 (Heparin binding
protein HBp15)
Length = 127
Score = 151 bits (381), Expect = 3e-37
Identities = 79/120 (65%), Positives = 94/120 (77%), Gaps = 3/120 (2%)
Query: 6 AAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSV-SVTREKS 64
A G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG LG V ++ R KS
Sbjct: 8 AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKS 67
Query: 65 KITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
KITVTS+ FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+ YELRYF I ++E EEED
Sbjct: 68 KITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 125
>RL22_MOUSE (P67984) 60S ribosomal protein L22 (Heparin binding
protein HBp15)
Length = 127
Score = 151 bits (381), Expect = 3e-37
Identities = 79/120 (65%), Positives = 94/120 (77%), Gaps = 3/120 (2%)
Query: 6 AAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSV-SVTREKS 64
A G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG LG V ++ R KS
Sbjct: 8 AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKS 67
Query: 65 KITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
KITVTS+ FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+ YELRYF I ++E EEED
Sbjct: 68 KITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 125
>RL22_HUMAN (P35268) 60S ribosomal protein L22 (Epstein-Barr virus
small RNA associated protein) (EBER associated protein)
(EAP) (Heparin binding protein HBp15)
Length = 127
Score = 150 bits (378), Expect = 6e-37
Identities = 78/118 (66%), Positives = 93/118 (78%), Gaps = 3/118 (2%)
Query: 8 GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSV-SVTREKSKI 66
G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GKAG LG V ++ R KSKI
Sbjct: 10 GGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKI 69
Query: 67 TVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
TVTS+ FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+ YELRYF I ++E EEED
Sbjct: 70 TVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 125
>RL22_TRIGR (P13732) 60S ribosomal protein L22 (Development-specific
protein 217)
Length = 130
Score = 148 bits (373), Expect = 2e-36
Identities = 76/124 (61%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 3 RGSAAGAKGKKKGAT--FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVT 60
+G KGKKK T FTIDC PVED IMD ++ E+FLQERIKV GK L ++ +
Sbjct: 8 KGGRPSGKGKKKKQTLKFTIDCTLPVEDGIMDASNFEQFLQERIKVNGKTKNLTTNIVIE 67
Query: 61 REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 120
R+KSK+TVTS+ FSKRYLKYLTKKYLKK+N+RDWLRV+A+NK+ YELRYF I +++
Sbjct: 68 RKKSKVTVTSEIAFSKRYLKYLTKKYLKKNNLRDWLRVVAANKES--YELRYFQINQDDE 125
Query: 121 EEED 124
EEED
Sbjct: 126 EEED 129
>RL22_XENLA (P50886) 60S ribosomal protein L22
Length = 127
Score = 145 bits (365), Expect = 2e-35
Identities = 75/118 (63%), Positives = 92/118 (77%), Gaps = 3/118 (2%)
Query: 8 GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSV-SVTREKSKI 66
G+K KK+ FT+DC PVED IMD A+ E+FL +RIKV GK G LG V S+ R KSKI
Sbjct: 10 GSKKKKQLLKFTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKI 69
Query: 67 TVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
TV+S+ FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+ YELRYF I ++E EEED
Sbjct: 70 TVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 125
>RL22_GADMO (P52865) 60S ribosomal protein L22 (Fragment)
Length = 124
Score = 137 bits (346), Expect = 3e-33
Identities = 72/115 (62%), Positives = 88/115 (75%), Gaps = 3/115 (2%)
Query: 8 GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSV-SVTREKSKI 66
G K KK+ FT+DC PVED IMD A+ E+FLQERIKV GK+G LG+ V S+ R SKI
Sbjct: 7 GGKKKKQILKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKSGNLGNGVVSIERXXSKI 66
Query: 67 TVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGE 121
+V S+ FSKRYLKYLTKKYLKK+N+RDWLRV+A+ K+ YELRYF I ++E E
Sbjct: 67 SVNSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDEEE 119
>RL22_DROME (P50887) 60S ribosomal protein L22
Length = 299
Score = 134 bits (336), Expect = 5e-32
Identities = 64/117 (54%), Positives = 85/117 (71%), Gaps = 2/117 (1%)
Query: 8 GAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVTREKSKIT 67
G K KK FTIDC ED IMD+A EK+++ R+KV GK LG++V+ R K K+
Sbjct: 183 GQKKKKVSLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLI 242
Query: 68 VTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
V+SD +FSK YLKYLTKKYLKK+++RDW+RV+A+ KD YELRYF I+ N+ E++D
Sbjct: 243 VSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDS--YELRYFRISSNDDEDDD 297
>RL22_SCHPO (Q09668) 60S ribosomal protein L22
Length = 117
Score = 119 bits (298), Expect = 1e-27
Identities = 62/115 (53%), Positives = 79/115 (67%), Gaps = 3/115 (2%)
Query: 10 KGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVTRE-KSKITV 68
K K + ID V DKI D+A+ EK+L +RIKV GK G LG SV V+RE SKI V
Sbjct: 4 KNTKVSNKYIIDATAAVNDKIFDVAAFEKYLIDRIKVDGKTGNLGSSVVVSREGSSKIAV 63
Query: 69 TSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEE 123
+ +FS RYLKYLTKK+LKKH++RDWLRV+++ K +YELRY+N+ EEE
Sbjct: 64 IAHIDFSGRYLKYLTKKFLKKHSLRDWLRVVSTKK--GVYELRYYNVVVGNDEEE 116
>RL22_CAEEL (P52819) 60S ribosomal protein L22
Length = 130
Score = 116 bits (290), Expect = 1e-26
Identities = 62/122 (50%), Positives = 85/122 (68%), Gaps = 5/122 (4%)
Query: 2 SRGSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALG-DSVSVT 60
++ + + KK F ++C PVED I+ I LE FL E+IKV GK G L ++V V
Sbjct: 7 AKSAKKALRKKKVHLKFNVECKNPVEDGILRIEDLEAFLNEKIKVNGKTGHLAANNVKVE 66
Query: 61 REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEG 120
KSK++V S+ FSKRYLKYLTKKYLK++++RDWLRV+A NK + YE+RYF+I N+G
Sbjct: 67 VAKSKVSVVSEVPFSKRYLKYLTKKYLKRNSLRDWLRVVAVNK--NTYEVRYFHI--NDG 122
Query: 121 EE 122
E+
Sbjct: 123 ED 124
>R22A_YEAST (P05749) 60S ribosomal protein L22-A (YL31) (RP4)
Length = 120
Score = 105 bits (261), Expect = 2e-23
Identities = 50/116 (43%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 9 AKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVTREKSKITV 68
++ +K TFT+D + P E+ + D AS K+L + IKV G G LG++V+VT + + +TV
Sbjct: 5 SRKQKIAKTFTVDVSSPTENGVFDPASYAKYLIDHIKVEGAVGNLGNAVTVTEDGTVVTV 64
Query: 69 TSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
S + FS +YLKYLTKKYLKK+ +RDW+R +++ + Y L ++ + E EEED
Sbjct: 65 VSTAKFSGKYLKYLTKKYLKKNQLRDWIRFVSTKTNE--YRLAFYQVTPEEDEEED 118
>R22B_YEAST (P56628) 60S ribosomal protein L22-B
Length = 121
Score = 99.0 bits (245), Expect = 2e-21
Identities = 45/108 (41%), Positives = 73/108 (66%), Gaps = 2/108 (1%)
Query: 17 TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSK 76
T T+D + P E+ + D AS K+L + IKV G G LG+++ VT + S +TV S + FS
Sbjct: 13 TLTVDVSSPTENGVFDPASYSKYLIDHIKVDGAVGNLGNAIEVTEDGSIVTVVSSAKFSG 72
Query: 77 RYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
+YLKYLTKKYLKK+ +RDW+R ++ +++ Y+L ++ + + +EE+
Sbjct: 73 KYLKYLTKKYLKKNQLRDWIRFVSIRQNQ--YKLVFYQVTPEDADEEE 118
>TRXB_RICPR (Q9ZD97) Thioredoxin reductase (EC 1.8.1.9) (TRXR)
Length = 310
Score = 32.0 bits (71), Expect = 0.25
Identities = 24/84 (28%), Positives = 42/84 (49%), Gaps = 6/84 (7%)
Query: 41 QERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVR---DWL- 96
QE + VGG AL +++ +T +K+TV N S R K L + K + D +
Sbjct: 146 QEIVVVGGGNSALEEALYLTNHANKVTVVHRRN-SFRAEKILQDRLFKNPKISVIWDHII 204
Query: 97 -RVIASNKDRSIYELRYFNIAENE 119
++ SNK +++ ++ N+ NE
Sbjct: 205 DEIVGSNKPKAVTGVKIQNVYTNE 228
>RADC_PASMU (P57913) DNA repair protein radC homolog
Length = 224
Score = 31.2 bits (69), Expect = 0.43
Identities = 16/52 (30%), Positives = 30/52 (56%), Gaps = 3/52 (5%)
Query: 66 ITVTSDSNFSKRYLKY---LTKKYLKKHNVRDWLRVIASNKDRSIYELRYFN 114
I + + + SKRYL+ LT+ + NVR +L+ NK+R I+++ + +
Sbjct: 80 IQLQACTEMSKRYLQEELKLTQAFKNSENVRFYLQATLENKEREIFQVLFLD 131
>GALE_HAEIN (P24325) UDP-glucose 4-epimerase (EC 5.1.3.2)
(Galactowaldenase) (UDP-galactose 4-epimerase)
Length = 338
Score = 31.2 bits (69), Expect = 0.43
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 24 KPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKYLT 83
KP E + ++A +QE K G S +V + I +T D Y T
Sbjct: 92 KPTEYYMNNVAGTLVLIQEMKKAGVWNFVFSSSATVYGDPKIIPITEDCEVGGTTNPYGT 151
Query: 84 KKYLKKHNVRDWLRVIASNKDRSIYELRYFN 114
KY+ + +RD + + S+ LRYFN
Sbjct: 152 SKYMVEQILRDTAK---AEPKFSMTILRYFN 179
>14P_ARATH (O64628) UPF0071 protein At2g18990
Length = 211
Score = 28.9 bits (63), Expect = 2.1
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 14/82 (17%)
Query: 23 AKPVEDKIMD-IASLEKFLQERIKVGGKAGALGDSVSVTREKSKITVTSDSNFSKRYLKY 81
AK +EDKI D IASLEK + D + V RE+ + + KR++
Sbjct: 17 AKAMEDKIDDEIASLEKLDE-------------DDLEVLRERRLKQMKKMAEKKKRWISL 63
Query: 82 LTKKYLKKHNVRDWLRVIASNK 103
+Y + H+ +D+ V+ +++
Sbjct: 64 GHGEYSEIHSEKDFFSVVKASE 85
>YEF1_YEAST (P32622) Hypothetical 55.9 kDa protein in GDA1-UTR2
intergenic region
Length = 495
Score = 28.5 bits (62), Expect = 2.8
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 71 DSNFSKRYLKYLTKKYLKKHN 91
DSN SK +KY +K+++KKH+
Sbjct: 160 DSNCSKNRVKYWSKEFVKKHD 180
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.312 0.131 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,617,502
Number of Sequences: 164201
Number of extensions: 500284
Number of successful extensions: 1183
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1142
Number of HSP's gapped (non-prelim): 41
length of query: 124
length of database: 59,974,054
effective HSP length: 100
effective length of query: 24
effective length of database: 43,553,954
effective search space: 1045294896
effective search space used: 1045294896
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144541.1