BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144538.1 - phase: 0 /pseudo
(942 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YD27_SCHPO (Q10255) Hypothetical protein C56F8.07 in chromosome I 42 0.008
DDI1_YEAST (P40087) DNA-damage inducible protein DDI1 (v-SNARE-m... 40 0.029
YD28_SCHPO (Q10256) Hypothetical protein C56F8.08 in chromosome I 39 0.065
GCC2_HUMAN (Q8IWJ2) GRIP and coiled-coil domain-containing prote... 38 0.14
SNE2_HUMAN (Q8WXH0) Nesprin 2 (Nuclear envelope spectrin repeat ... 37 0.32
GCC2_MOUSE (Q8CHG3) GRIP and coiled-coil domain-containing prote... 36 0.42
USO1_YEAST (P25386) Intracellular protein transport protein USO1 36 0.55
MFP1_LYCES (P93203) MAR binding filament-like protein 1 36 0.55
YAF3_SCHPO (Q09857) Hypothetical protein C29E6.03c in chromosome I 35 0.72
VGLG_HRSV8 (P23041) Major surface glycoprotein G (Attachment gly... 35 0.72
VGLG_HRSV1 (P20896) Major surface glycoprotein G (Attachment gly... 35 0.72
VDP_BOVIN (P41541) General vesicular transport factor p115 (Tran... 35 0.94
TPM_MYTED (Q25457) Tropomyosin 35 0.94
SWI4_YEAST (P25302) Regulatory protein SWI4 (Cell-cycle box fact... 35 0.94
VGR1_MOUSE (P35969) Vascular endothelial growth factor receptor ... 35 1.2
TPM_MYTGA (P91958) Tropomyosin 35 1.2
MFP1_TOBAC (Q9M7J4) MAR binding filament-like protein 1-1 35 1.2
K2C7_HUMAN (P08729) Keratin, type II cytoskeletal 7 (Cytokeratin... 35 1.2
CCPA_BACME (P46828) Glucose-resistance amylase regulator (Catabo... 35 1.2
PIP_LACLA (P49022) Phage infection protein 34 1.6
>YD27_SCHPO (Q10255) Hypothetical protein C56F8.07 in chromosome I
Length = 507
Score = 42.0 bits (97), Expect = 0.008
Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 15/240 (6%)
Query: 691 AISLGGNKLEETITKAKSVKGEIVKLLGEKNAIKTPLDKNKTLNPLRL------TKLNLE 744
AI +GG +L ++ AKS G + +KN +T L LN +R LN
Sbjct: 156 AIDMGG-RLVKSCHAAKS--GPSSTITSKKNIRQTILATPFLLNRIRTEFPQLAAVLNDP 212
Query: 745 AQFAK-FLNILKRICIKIPFAEALSRMPLYAKF-LREIFSKKKAIDHKETIALTRESSAI 802
FA + +I ++IP + MP +++ L ++ +++ + A+T +
Sbjct: 213 NAFATTWQSINASQLLQIPSSTYSMGMPSFSEDDLFDVEVQRRIEEQIRQNAVTENMQSA 272
Query: 803 VKKQPQKLRDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTEMILK 862
++ P+ + I V KA GA ++L ++ G+ L T
Sbjct: 273 IENHPEVFGQVYMLFVNVEINGHKV-KAFVDSGAQATILSADCAEKCGLTRLLDTRFQGV 331
Query: 863 LADRSTIPLAGYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQS 922
+ G + P+KI +Y+P F V+ E DV ++LG L A ID+++
Sbjct: 332 AKGVGMAKILGCVHSAPLKIGDLYLPCRFTVI---EGRDVDMLLGLDMLRRYQACIDLEN 388
>DDI1_YEAST (P40087) DNA-damage inducible protein DDI1
(v-SNARE-master 1)
Length = 428
Score = 40.0 bits (92), Expect = 0.029
Identities = 26/93 (27%), Positives = 42/93 (44%), Gaps = 4/93 (4%)
Query: 829 KALCHLGASVSLLPLSLFKRMGIGELKPTEMILKLADRSTIPLAGYIEDIPVKIEGIYIP 888
KA GA +++ L K+ G+ + I + T + G I VKIE YIP
Sbjct: 216 KAFVDTGAQTTIMSTRLAKKTGLSRMIDKRFIGEARGVGTGKIIGRIHQAQVKIETQYIP 275
Query: 889 TDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQ 921
F V+D D+ +++G L A +D++
Sbjct: 276 CSFTVLDT----DIDVLIGLDMLKRHLACVDLK 304
>YD28_SCHPO (Q10256) Hypothetical protein C56F8.08 in chromosome I
Length = 332
Score = 38.9 bits (89), Expect = 0.065
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 5/165 (3%)
Query: 759 IKIPFAEALSRMPLYAKF-LREIFSKKKAIDHKETIALTRESSAIVKKQPQKLRDPGSFA 817
++IP + MP +++ L ++ +++ + A+T + ++ P+
Sbjct: 53 LQIPSSTYSMGMPSFSEDDLFDVEVQRRIEEQIRQNAVTENMQSAIENHPEVFGQVYMLF 112
Query: 818 IPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTEMILKLADRSTIPLAGYIED 877
+ I V KA GA ++L ++ G+ L T + G +
Sbjct: 113 VNVEINGHKV-KAFVDSGAQATILSADCAEKCGLTRLLDTRFQGVAKGVGMAKILGCVHS 171
Query: 878 IPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQS 922
P+KI +Y+P F V+ E DV ++LG L A ID+++
Sbjct: 172 APLKIGDLYLPCRFTVI---EGRDVDMLLGLDMLRRYQACIDLEN 213
>GCC2_HUMAN (Q8IWJ2) GRIP and coiled-coil domain-containing protein 2
(Golgi coiled coil protein GCC185) (CTCL tumor antigen
se1-1) (CLL-associated antigen KW-11)
Length = 1583
Score = 37.7 bits (86), Expect = 0.14
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 615 ENCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQQVAISSQTP 674
E+ + + +QL+ Q ++N L +++++ ++ K+LE QI +V + A+ +
Sbjct: 943 EHRIEDLTRQLRNSTLQCETINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKEL 1002
Query: 675 GVFPGQTETNPKAHVNAISLGGNKLEETITKAKSVKGEIVKLLGEKNAIKTPLDKNKTLN 734
Q E K H + N+LEE + + K ++ K + E +K + +N
Sbjct: 1003 EAEKLQKEQKIKEHATTV----NELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMN 1058
>SNE2_HUMAN (Q8WXH0) Nesprin 2 (Nuclear envelope spectrin repeat
protein 2) (Syne-2) (Synaptic nuclear envelope protein 2)
(Nucleus and actin connecting element protein) (NUANCE
protein)
Length = 6885
Score = 36.6 bits (83), Expect = 0.32
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 501 KKEAGIYE--VSEYNHLAAKVEALTQKIE---KLNVNAAQPSPASPTCEVCGITGHTGVD 555
K+E ++E SE++ A+++ L Q E +L V + + C +TG +
Sbjct: 1683 KEELQVHEQKTSEFSRRVAEIQFLLQSSEIPLELQVMESSILNKMEHVQKC-LTGESNCH 1741
Query: 556 CQLGSAANI-EQLNYAQYNQGMRPNQNFYKNPQGSYGQTAPPGYTNNQRVAQKSSLEILL 614
GS A + E L+ A+ GM + +P S Q + QK S+ ILL
Sbjct: 1742 ALSGSTAELREDLDQAKTQIGMTESLLKALSPSDSLEIFTKLEEIQQQILQQKHSM-ILL 1800
Query: 615 ENCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIATH-TKMLETQ 659
EN + +L ELK Q S++D NTK + H +K+L Q
Sbjct: 1801 ENQIGCLTPELSELKKQYESVSD---LFNTKKSVLQDHFSKLLNDQ 1843
>GCC2_MOUSE (Q8CHG3) GRIP and coiled-coil domain-containing protein 2
(Golgi coiled coil protein GCC185)
Length = 1679
Score = 36.2 bits (82), Expect = 0.42
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 623 KQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQTE 682
KQL+ Q L L +++++ + K+LE QI +V + + + Q E
Sbjct: 1043 KQLRNSTCQYERLTSDNEDLLARIETLQANAKLLEAQILEVQKAKGVVEKELDAEELQKE 1102
Query: 683 TNPKAHVNAISLGGNKLEETITKAKSVKGEIVKLLGEKNAIKTPLDKNKTLN 734
K HV+ + N+LEE + + K ++ K + E +K + +N
Sbjct: 1103 QKIKEHVSTV----NELEELQLQFQKEKKQLQKTMQELELVKKDAQQTTLMN 1150
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 35.8 bits (81), Expect = 0.55
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 33/198 (16%)
Query: 623 KQLQELKNQTGSLNDSLSKLNTKVDSIATHTK-------MLETQISQVAQQVAISSQTPG 675
K ++E KN++ LS L K+DS++ + +E I Q+ + ++ QT
Sbjct: 983 KAVEESKNESSI---QLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTKE 1039
Query: 676 VFPGQTETNPKAHVNAISLGGNKLEETITKAKSVKGEIVKLLGEKNAIKTPLDKNKTLNP 735
+++++ + + ISL KLE T ++N K ++
Sbjct: 1040 EIISKSDSSKDEYESQISLLKEKLETATT------------ANDENVNK--------ISE 1079
Query: 736 LRLTKLNLEAQFAKFLNILKRICIKIPFAE-ALSRMPLYAKFLRE--IFSKKKAIDHKET 792
L T+ LEA+ A + N+ + K+ +E AL + + L+E I +K+A + K+
Sbjct: 1080 LTKTREELEAELAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQ 1139
Query: 793 IALTRESSAIVKKQPQKL 810
+ R + ++K+ + L
Sbjct: 1140 LNSLRANLESLEKEHEDL 1157
Score = 34.7 bits (78), Expect = 1.2
Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 33/223 (14%)
Query: 599 TNNQRVAQKSSLEILLENCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLET 658
T+ + + + E L+ + K+ E K Q SL +L L + + +A K E
Sbjct: 1107 TSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEE 1166
Query: 659 QISQVAQQVAISSQTPGVFPGQTETNPKAHVNAISLGGNKLEETITKAKSVKGEIVKLLG 718
QI+ +Q + IS +++ T + +S+K + +L G
Sbjct: 1167 QIANKERQ---------------------YNEEISQLNDEITSTQQENESIKKKNDELEG 1205
Query: 719 EKNAIKTPLDKNKTLNPLRLTKLNL---------EAQFAKFLNILKRI-CIKIPFAEALS 768
E A+K+ ++ L + LNL E A L +K + + E
Sbjct: 1206 EVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQD 1265
Query: 769 RMPLYAKFLREIFSKKKAIDHKET--IALTRESSAIVKKQPQK 809
K + E+ K KA + K + + L +ES I ++ K
Sbjct: 1266 ECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAK 1308
>MFP1_LYCES (P93203) MAR binding filament-like protein 1
Length = 697
Score = 35.8 bits (81), Expect = 0.55
Identities = 32/163 (19%), Positives = 76/163 (45%), Gaps = 16/163 (9%)
Query: 598 YTNNQRVAQKSSLEIL------LENCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIAT 651
+T N+ +K+ + L LE+ + + + + L+++ +SL ++N V ++A
Sbjct: 534 HTRNELKQEKTIVRTLEEELKFLESQITREKELRKSLEDELEKATESLDEINRNVLALAE 593
Query: 652 HTKMLETQISQVAQQVAISSQTPG----VFPGQTETNPKAHVNAISLGGNK--LEETITK 705
++ ++ S + + + Q+ + E AH + LG + LE+ K
Sbjct: 594 ELELATSRNSSLEDEREVHRQSVSEQKQISQEAQENLEDAHSLVMKLGKERESLEKRAKK 653
Query: 706 AK----SVKGEIVKLLGEKNAIKTPLDKNKTLNPLRLTKLNLE 744
+ + KGEI++L + N++K P++ + + K+N++
Sbjct: 654 LEDEMAAAKGEILRLRSQINSVKAPVEDEEKVVAGEKEKVNVQ 696
>YAF3_SCHPO (Q09857) Hypothetical protein C29E6.03c in chromosome I
Length = 1044
Score = 35.4 bits (80), Expect = 0.72
Identities = 30/138 (21%), Positives = 61/138 (43%), Gaps = 9/138 (6%)
Query: 601 NQRVAQKSSLEILLENCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQI 660
N + K ++ L+N + ++ +LQEL++Q + + LN ++ + A +E+
Sbjct: 791 NDNLGNKENIISDLKNKLSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMESIN 850
Query: 661 SQVAQQVAISSQTPGVFPGQTETN-----PKAHVNAISLGGNKLEETITKAKSVKGEIVK 715
A ++ ++ Q Q + N K H IS LE A ++ E+
Sbjct: 851 KNQANELKLAKQKCSNL--QEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKT 908
Query: 716 LLGEKNAIKTPL--DKNK 731
+ E +++K+ D+NK
Sbjct: 909 VKSENDSLKSVSNDDQNK 926
>VGLG_HRSV8 (P23041) Major surface glycoprotein G (Attachment
glycoprotein G)
Length = 292
Score = 35.4 bits (80), Expect = 0.72
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 20/138 (14%)
Query: 634 SLNDSLSKLNTKVDSIATHT-KMLETQISQVAQQVAISSQTPGVFPGQTETNPKAHVNAI 692
S N ++ V +I HT K + T ++QV + SS+ P T T+P H N+
Sbjct: 64 SANHKVTLTTVTVQTIKNHTGKNISTYLTQVPPERVNSSKQP------TTTSP-IHTNSA 116
Query: 693 SLGGNKLEETITKAKSVKGEIVKLLGEKNAIKTPLDKNKTLNPLRLTKLNLEAQFAKFL- 751
++ N ET KG I P K+++ NP + K + + F+
Sbjct: 117 TISPNTKSETHHTTAQTKGRIT----TSTQTNKPSTKSRSKNPPKKPKDDYHFEVFNFVP 172
Query: 752 -------NILKRICIKIP 762
+ K IC IP
Sbjct: 173 CSICGNNQLCKSICKTIP 190
>VGLG_HRSV1 (P20896) Major surface glycoprotein G (Attachment
glycoprotein G)
Length = 292
Score = 35.4 bits (80), Expect = 0.72
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 20/138 (14%)
Query: 634 SLNDSLSKLNTKVDSIATHT-KMLETQISQVAQQVAISSQTPGVFPGQTETNPKAHVNAI 692
S N ++ V +I HT K + T ++QV + SS+ P T T+P H N+
Sbjct: 64 SANHKVTLTTVTVQTIKNHTEKNISTYLTQVPPERVNSSKQP------TTTSP-IHTNSA 116
Query: 693 SLGGNKLEETITKAKSVKGEIVKLLGEKNAIKTPLDKNKTLNPLRLTKLNLEAQFAKFL- 751
++ N ET KG I P K+++ NP + K + + F+
Sbjct: 117 TISPNTKSETHHTTAQTKGRIT----TSTQTNKPSTKSRSKNPPKKPKDDYHFEVFNFVP 172
Query: 752 -------NILKRICIKIP 762
+ K IC IP
Sbjct: 173 CSICGNNQLCKSICKTIP 190
>VDP_BOVIN (P41541) General vesicular transport factor p115
(Transcytosis associated protein) (TAP) (Vesicle docking
protein)
Length = 961
Score = 35.0 bits (79), Expect = 0.94
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 606 QKSSLEILLENCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQ 665
Q S+ +N + Q+ QL+ELK Q +L +L T V + + + Q + +
Sbjct: 647 QHDSIVTHYKNMIREQDLQLEELKQQISTLKCQNEQLQTAVTQQVSQIQQHKDQYNLLKV 706
Query: 666 QVAISSQTPGVFPGQTETNPKAHVNAISLGGNKLEETITKAKSVKGEIVKLLGEKNAIKT 725
Q+ SQ G + + N IS +L E I + KS + + L EK+++
Sbjct: 707 QLGKDSQHQGPYTDGAQMN-GVQPEEIS----RLREEIEELKSNRELLQSQLAEKDSLIE 761
Query: 726 PLDKNKTLNP 735
L K+ L+P
Sbjct: 762 NL-KSSQLSP 770
>TPM_MYTED (Q25457) Tropomyosin
Length = 284
Score = 35.0 bits (79), Expect = 0.94
Identities = 47/222 (21%), Positives = 103/222 (46%), Gaps = 25/222 (11%)
Query: 606 QKSSLEILLENCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQ 665
QK S++ EN + N QLQ+++ + + +++ ++ S+ MLE I + +
Sbjct: 47 QKKSIQT--ENDLDNTQTQLQDVQAKYETTEKQIAEHEQEIQSLTRKISMLEEDIMKSEE 104
Query: 666 Q---VAISSQTPGVFPGQTETNPKAHVNAISLGG----NKLEETITKAKSVKGEIVKLLG 718
+ A + ++E N K N ++ G ++LE+ +T+AK + E K
Sbjct: 105 RYTTAASKLEEASKAADESERNRKVLEN-LNCGNDERIDQLEKQLTEAKWIAEEADKKY- 162
Query: 719 EKNAIKTPLDKNKTLNPLRLTKLNLEAQFAKFLNILKRICI--------KIPFAEALSRM 770
E+ A K + T L + LEA AK +++ +++ + ++ +A R
Sbjct: 163 EEAARKLAI----TEVDLERAEARLEAAEAKVIDLEEQLTVVGANIKTLQVQNDQASQRE 218
Query: 771 PLYAKFLREIFSKKKAIDHKETIALTRESSAIVKKQPQKLRD 812
Y + +R++ ++ K +++ T A + + ++K+ +L D
Sbjct: 219 DSYEETIRDLTNRLKDAENRATEA--ERTVSKLRKEVDRLED 258
>SWI4_YEAST (P25302) Regulatory protein SWI4 (Cell-cycle box factor,
chain SWI4) (ART1 protein)
Length = 1093
Score = 35.0 bits (79), Expect = 0.94
Identities = 26/110 (23%), Positives = 52/110 (46%), Gaps = 9/110 (8%)
Query: 624 QLQELKNQTGSLNDSLSKLNTKVDSI----ATHTKMLETQISQVAQQVAISSQTPGVFPG 679
Q+ L + L+ ++KLNTKV S+ K L+ ++ + ++ + +
Sbjct: 858 QMSPLGKYSKPLSQQINKLNTKVSSLQRIMGEEIKNLDNEVVETESSISNNKKRLITIAH 917
Query: 680 QTE-----TNPKAHVNAISLGGNKLEETITKAKSVKGEIVKLLGEKNAIK 724
Q E + K +N+IS ++++ET +K S K ++ L + A+K
Sbjct: 918 QIEDAFDSVSNKTPINSISDLQSRIKETSSKLNSEKQNFIQSLEKSQALK 967
>VGR1_MOUSE (P35969) Vascular endothelial growth factor receptor 1
precursor (EC 2.7.1.112) (VEGFR-1) (Tyrosine-protein
kinase receptor FLT) (FLT-1) (Embryonic receptor kinase
2)
Length = 1333
Score = 34.7 bits (78), Expect = 1.2
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 617 CMMNQNKQLQEL--KNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQQVAISSQTP 674
C N +K+ + +N+ + D S L +++SI+ ++E V+ V SQTP
Sbjct: 472 CHHNHSKERYDFCTENEESFILDPSSNLGNRIESISQRMTVIEGTNKTVSTLVVADSQTP 531
Query: 675 GVFP-------GQTETNPKAHVNAISLG 695
G++ G E N K +V + G
Sbjct: 532 GIYSCRAFNKIGTVERNIKFYVTDVPNG 559
>TPM_MYTGA (P91958) Tropomyosin
Length = 284
Score = 34.7 bits (78), Expect = 1.2
Identities = 47/222 (21%), Positives = 103/222 (46%), Gaps = 25/222 (11%)
Query: 606 QKSSLEILLENCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQ 665
QK S++ EN + N QLQ+++ + + +++ ++ S+ MLE I + +
Sbjct: 47 QKKSIQT--ENDLDNTQTQLQDVQAKYETTEKQIAEHEQEIQSLTRKISMLEEDIMKSEE 104
Query: 666 Q---VAISSQTPGVFPGQTETNPKAHVNAISLGG----NKLEETITKAKSVKGEIVKLLG 718
+ A + ++E N K N ++ G ++LE+ +T+AK + E K
Sbjct: 105 RYTTAASKLEEASKAADESERNRKVLEN-LNCGNDERIDQLEKQLTEAKWIAEEADKKY- 162
Query: 719 EKNAIKTPLDKNKTLNPLRLTKLNLEAQFAKFLNILKRICI--------KIPFAEALSRM 770
E+ A K + T L + LEA AK +++ +++ + ++ +A R
Sbjct: 163 EEAARKLAI----TEVDLERAEARLEAAEAKVIDLEEQLTVVGANIKTLQVQNDQASQRE 218
Query: 771 PLYAKFLREIFSKKKAIDHKETIALTRESSAIVKKQPQKLRD 812
Y + +R++ ++ K +++ T A + + ++K+ +L D
Sbjct: 219 DSYEETIRDLTNRLKDAENRATEA--ERTVSKLQKEVDRLED 258
>MFP1_TOBAC (Q9M7J4) MAR binding filament-like protein 1-1
Length = 722
Score = 34.7 bits (78), Expect = 1.2
Identities = 30/124 (24%), Positives = 56/124 (44%), Gaps = 16/124 (12%)
Query: 614 LENCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQQVAISSQT 673
LE + + L E+ +L L N+ + S+ ++L+ +S+ Q IS ++
Sbjct: 578 LEEELERATESLDEMNRNAFALAKELELANSHISSLEDEREVLQKSVSEQKQ---ISQES 634
Query: 674 PGVFPGQTETNPKAHVNAISLGGNK--LEETITKAK----SVKGEIVKLLGEKNAIKTPL 727
E AH + LG + LE+ K + S KGEI++L + N++K P+
Sbjct: 635 -------RENLEDAHSLVMKLGKERESLEKRAKKLEDEMASAKGEILRLRTQVNSVKAPV 687
Query: 728 DKNK 731
+ +
Sbjct: 688 NNEE 691
>K2C7_HUMAN (P08729) Keratin, type II cytoskeletal 7 (Cytokeratin 7)
(K7) (CK 7) (Sarcolectin)
Length = 468
Score = 34.7 bits (78), Expect = 1.2
Identities = 29/127 (22%), Positives = 59/127 (45%), Gaps = 7/127 (5%)
Query: 626 QELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQQ-VAISSQTPGVFPGQTETN 684
QE Q +LN+ + KV + K+LET+ + + +Q A SS+ P +F Q
Sbjct: 88 QEESEQIKTLNNKFASFIDKVRFLEQQNKLLETKWTLLQEQKSAKSSRLPDIFEAQI-AG 146
Query: 685 PKAHVNAISLGGNKLEETITKAKSVKGEIVKLLGEKNAIKTPLDK-----NKTLNPLRLT 739
+ + A+ + G +LE+ + + V + ++ +T + K ++ ++
Sbjct: 147 LRGQLEALQVDGGRLEQGLRTMQDVVEDFKNKYEDEINRRTAAENEFVVLKKDVDAAYMS 206
Query: 740 KLNLEAQ 746
K+ LEA+
Sbjct: 207 KVELEAK 213
>CCPA_BACME (P46828) Glucose-resistance amylase regulator
(Catabolite control protein)
Length = 332
Score = 34.7 bits (78), Expect = 1.2
Identities = 34/119 (28%), Positives = 50/119 (41%), Gaps = 15/119 (12%)
Query: 604 VAQKSSLEILLENCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQV 663
+A I+L N NQ+K+L L N G D + ++ V T + E + S V
Sbjct: 85 IATMYKYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNV----TEEHVEELKKSPV 140
Query: 664 AQQVAISSQTPGVFPGQTETNPKAHVNAISL---GGNK--------LEETITKAKSVKG 711
+A S ++ P T +A +A+ G+K LEE I AK VKG
Sbjct: 141 PVVLAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKG 199
>PIP_LACLA (P49022) Phage infection protein
Length = 901
Score = 34.3 bits (77), Expect = 1.6
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 29/186 (15%)
Query: 568 NYAQYNQGMRPNQNFYKNPQGSYGQTAPPGYTNNQRVAQKSSLEILLE--NCMMN----- 620
N A+ + ++ ++ K Q S G + + + Q S+L+ LL + MN
Sbjct: 404 NIARQREAIQNIVDYMKQVQESNGS-----HDLDSTIEQLSNLDSLLSGLSTRMNHLNEL 458
Query: 621 -QNKQLQELKNQTGSLNDSLSKLNTKVDSIATH--TKMLETQISQVAQQVAISSQTPGVF 677
QN + E++ +ND ++K++ VD+I +K ++T ++ + + +A G+
Sbjct: 459 VQNGDVSEIRAYLSQINDVVTKISNLVDNIDVSGISKTIDTVLTSLTKTIA---DAKGLL 515
Query: 678 PGQTETNPKAHVNAISLGGNKLEETITKAKSVKGEIVKLLGEKNAIKTPL-DKNKTLNPL 736
+ + +A +N+ S +T++ A ++ + K GE AIK + D N LN
Sbjct: 516 NQAQQIDFEALLNSTS-------QTVSNAVTI---LEKYQGEMPAIKQEIHDANLMLNGN 565
Query: 737 RLTKLN 742
T +N
Sbjct: 566 MTTIVN 571
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.332 0.142 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,134,765
Number of Sequences: 164201
Number of extensions: 3900975
Number of successful extensions: 14333
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 14275
Number of HSP's gapped (non-prelim): 96
length of query: 942
length of database: 59,974,054
effective HSP length: 120
effective length of query: 822
effective length of database: 40,269,934
effective search space: 33101885748
effective search space used: 33101885748
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 71 (32.0 bits)
Medicago: description of AC144538.1