BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144516.4 + phase: 0
(360 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 41 0.004
FIG2_YEAST (P25653) Factor induced gene 2 precursor (Cell wall a... 41 0.004
YG3J_YEAST (P48234) Hypothetical WD-repeat protein in MOL1-NAT2 ... 38 0.035
P121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 1... 38 0.035
RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subun... 38 0.045
YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A... 37 0.059
RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB) 37 0.059
IF2_AQUAE (O67825) Translation initiation factor IF-2 37 0.077
SMC_METJA (Q59037) Chromosome partition protein smc homolog 37 0.10
MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isofor... 37 0.10
RA50_METJA (Q58718) DNA double-strand break repair rad50 ATPase 36 0.13
RA50_AQUAE (O67124) Probable DNA double-strand break repair rad5... 36 0.13
MUC3_HUMAN (Q02505) Mucin 3A (Intestinal mucin 3A) (Fragments) 36 0.13
WSC4_YEAST (P38739) Cell wall integrity and stress response comp... 36 0.17
BRC1_DROME (Q01295) Broad-complex core-protein isoforms 1/2/3/4/5 36 0.17
YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in... 35 0.23
MU15_BOVIN (Q8MI01) Mucin 15 precursor (PASIII) (PAS3) (Glycopro... 35 0.23
CYL1_BOVIN (P35662) Cylicin I (Multiple-band polypeptide I) 35 0.23
YM96_YEAST (Q04893) Hypothetical 113.1 kDa protein in PRE5-FET4 ... 35 0.29
INV4_YEAST (P10596) Invertase 4 precursor (EC 3.2.1.26) (Beta-fr... 35 0.29
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor
Length = 374
Score = 41.2 bits (95), Expect = 0.004
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 3/189 (1%)
Query: 4 SLKFQNNNENQQTPQTQIMTAKVPITIFNNPLLSTITATNNYSTSDFSFSLSTNFPTGPT 63
S+ N Q T + +++ + ++P S+ T T + S+S S S S++ + +
Sbjct: 114 SVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSS 173
Query: 64 FKLSYTPTTTSSSLPFSLSLKSGLGLFGSPNHSPLVFSANFSLSSLSSSTPLLPSFSLHF 123
S + +++SSS S S S S + S + +++ S SS SSS+ S S
Sbjct: 174 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTS-SSHSSSSSSSSSSSSSS 232
Query: 124 KPQFGHFSLHKTVLSDSSNTNPLSVSPQIEKGFVPETNGSCSGWQNLNLEPFGHNNNNNV 183
+P S T +S S+ + ++V+P S + LN ++ + N
Sbjct: 233 RPSSS--SSFITTMSSSTFISTVTVTPSSSSSSTSSEVPSSTAALALNASKASNHTSLNA 290
Query: 184 GVGVGVGVG 192
G VG+ +G
Sbjct: 291 GAIVGIVIG 299
>FIG2_YEAST (P25653) Factor induced gene 2 precursor (Cell wall
adhesin FIG2)
Length = 1609
Score = 41.2 bits (95), Expect = 0.004
Identities = 41/96 (42%), Positives = 51/96 (52%), Gaps = 17/96 (17%)
Query: 34 PLLSTITATNNYSTSDFSFSLSTNFPTGPTFKLSYTPTTTS--------SSLPFSLSLKS 85
P S+I+A++ STS LST+ P+ P F S PT T+ SSLP LS KS
Sbjct: 1279 PSSSSISASSPSSTS----LLSTSLPS-PAFTSSTLPTATAVSSSTFIASSLP--LSSKS 1331
Query: 86 GLGLFGSPNHSPLVFSANFSLSSLSSSTPLLPSFSL 121
L L SP S ++ S S SS SSS LPS S+
Sbjct: 1332 SLSL--SPVSSSILMSQFSSSSSSSSSLASLPSLSI 1365
>YG3J_YEAST (P48234) Hypothetical WD-repeat protein in MOL1-NAT2
intergenic region
Length = 707
Score = 38.1 bits (87), Expect = 0.035
Identities = 28/88 (31%), Positives = 44/88 (49%), Gaps = 7/88 (7%)
Query: 250 ERVEEMKKDEWNNDDN----CEGNLQVLKEMKIDLENVEKENKEMKRVLDEMKMGVSKG- 304
E EE DE N N E +L+ +++ K +E +KE ++ +R ++EMK G S
Sbjct: 549 ESDEEESDDETNQKSNKEELSEKDLRKMEKQKALIERRKKEKEQSERFMNEMKAGTSTST 608
Query: 305 KVSKQKHA--GESVQSWGSNKNGRKENE 330
+ + H GE V +NG+K NE
Sbjct: 609 QRDESAHVTFGEQVGELLEVENGKKSNE 636
>P121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121
(Pore membrane protein of 121 kDa)
Length = 1200
Score = 38.1 bits (87), Expect = 0.035
Identities = 39/141 (27%), Positives = 58/141 (40%), Gaps = 25/141 (17%)
Query: 29 TIFNNPLLS-TITATNNYSTSDFSFSLSTNFP-----TGPTFKLSYTPTTTSSSLPFSLS 82
T F+ PL S T TA +N S F +L+T+ + PT S T T T + +PFS S
Sbjct: 862 TSFSQPLASSTQTAASNSGFSGFGSTLTTSTSAPATTSQPTLTFSNTVTPTFN-IPFSSS 920
Query: 83 LKSGLGLFGSPNHSPLV--------------FSANF----SLSSLSSSTPLLPSFSLHFK 124
K L + N P F ++F S++S S+ P +F +
Sbjct: 921 AKPALPTYPGANSQPTFGATDGATKPALAPSFGSSFTFGNSVASAPSAAPAPATFGSAAQ 980
Query: 125 PQFGHFSLHKTVLSDSSNTNP 145
P FG + ++T P
Sbjct: 981 PAFGGLKAAASTFGAPASTQP 1001
>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6)
Length = 1887
Score = 37.7 bits (86), Expect = 0.045
Identities = 36/113 (31%), Positives = 55/113 (47%), Gaps = 14/113 (12%)
Query: 53 SLSTNFPTGPTFKLSYTPTTTSSSLPFSLSLKSGLGLFGSPNHSPLVFSANFSLSSLSSS 112
S+S FP P+ SY+PT+ + ++ S G SPN+SP S N+S +S +
Sbjct: 1564 SMSPYFPASPSVSPSYSPTSPN----YTASSPGG----ASPNYSP--SSPNYSPTSPLYA 1613
Query: 113 TPLLPSFSLHFKPQFGHFSLHKTVLSDSSNTNPLSVSPQIEKGFVPETNGSCS 165
+P S + +F PQ +S S S T+P+ SP ++ P GS S
Sbjct: 1614 SPRYASTTPNFNPQSTGYSPSS---SGYSPTSPV-YSPTVQFQSSPSFAGSGS 1662
>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A
intergenic region
Length = 551
Score = 37.4 bits (85), Expect = 0.059
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 19 TQIMTAKVPITIFNNPLLSTITATNNYSTSDFSFSLSTNFPTGPTFKLSYTPTTTSSSLP 78
T A ++ ++ ++ST ++T +S+ S +S++ T + Y P++++SS P
Sbjct: 155 TSSTVASSTLSTSSSLVISTSSSTFTFSSESSSSLISSSISTSVSTSSVYVPSSSTSSPP 214
Query: 79 FSLSLKSGLGLFGSPNHSPLV-FSANFSLSSLSSST 113
S S + S + S L +S++FS SS SSS+
Sbjct: 215 SSSSELTSSSYSSSSSSSTLFSYSSSFSSSSSSSSS 250
Score = 32.3 bits (72), Expect = 1.9
Identities = 45/165 (27%), Positives = 68/165 (40%), Gaps = 13/165 (7%)
Query: 34 PLLSTITATNNYSTSDFSFSLSTNFPTGPTFKLSYTPTTTSSSLPFSLSLKSGLGLFGSP 93
P S+ +++YS+S S ST F +F S + +++SSS S S S S
Sbjct: 214 PSSSSELTSSSYSSSSSS---STLFSYSSSFSSSSSSSSSSSSSSSSSSSSSSSYFTLST 270
Query: 94 NHSPLVFSANF--SLSSLSSSTP----LLPSFSLHFKPQFGHFSLHKTVLSDSSNTNPLS 147
+ S ++S++ S SS SSS P S S P + +L KT+ S LS
Sbjct: 271 SSSSSIYSSSSYPSFSSSSSSNPTSSITSTSASSSITPASEYSNLAKTITSIIEGQTILS 330
Query: 148 VSPQIEKGFVPETNGSCSGWQNLNLEPFGHNNNNNVGVGVGVGVG 192
S S +N + N N+ +G VG+G
Sbjct: 331 ---NYYTTITYSPTASASSGKNSHHSGLS-KKNRNIIIGCVVGIG 371
Score = 32.3 bits (72), Expect = 1.9
Identities = 34/138 (24%), Positives = 64/138 (45%), Gaps = 13/138 (9%)
Query: 36 LSTITATNNYSTSDFSFSLSTNFPTGPTFKLSYTPTTTSSSLPFSLSLKSGLGLFGSPNH 95
+++ +++++ S S S ++ ++ + PTF ++ T +T +SS +LS S L + S +
Sbjct: 122 VTSSSSSSSISPSSSSSTIISSSSSLPTFTVASTSSTVASS---TLSTSSSLVI--STSS 176
Query: 96 SPLVFSANFSLS--------SLSSSTPLLPSFSLHFKPQFGHFSLHKTVLSDSSNTNPLS 147
S FS+ S S S+S+S+ +PS S P + S SS++ S
Sbjct: 177 STFTFSSESSSSLISSSISTSVSTSSVYVPSSSTSSPPSSSSELTSSSYSSSSSSSTLFS 236
Query: 148 VSPQIEKGFVPETNGSCS 165
S ++ S S
Sbjct: 237 YSSSFSSSSSSSSSSSSS 254
>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)
Length = 943
Score = 37.4 bits (85), Expect = 0.059
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 18/124 (14%)
Query: 61 GPTFKLSYTPTTTSSSLPFSLSLK--SGLGLFGSPNHSPLVFSANFSLSSLSSSTPLLPS 118
G L + + +P ++S+ + + GSPN S S S S SSS+
Sbjct: 312 GDLHTLEFLDDNNTPLIPITISIPITNSNSIVGSPNTS---ISCGVSNSGASSSSG---- 364
Query: 119 FSLHFKPQFGHFSLHKTVLSDSSNTNPLSVSPQIEKGFVPETNGSCSGWQNLNLEPFGHN 178
G S H ++LS SS+++ LS SP S S N N +N
Sbjct: 365 ---------GGISGHPSILSSSSSSSYLSTSPLSTSSLASSYQSSQSLQFNQNQNQNNNN 415
Query: 179 NNNN 182
NNNN
Sbjct: 416 NNNN 419
>IF2_AQUAE (O67825) Translation initiation factor IF-2
Length = 805
Score = 37.0 bits (84), Expect = 0.077
Identities = 33/119 (27%), Positives = 62/119 (51%), Gaps = 19/119 (15%)
Query: 238 KMPYLAVNKIGLERVEEMKKDEWNNDDNCEGNLQVLKEMKIDLENVEKENKEMKRVLDEM 297
K P + V +I ++ EE KK+E + E +++KE+ ++ + EKE K++++ E
Sbjct: 100 KKPEVIVEEIEEKKEEEEKKEEEKPKKSVE---ELIKEI-LEKKEKEKEKKKVEKERKEE 155
Query: 298 KMGVSKGKVSKQKHAGESVQSWGSNKNGRKENEKKQEIKPQNIVVSDFESELEKAIKAA 356
K+ V + K ++K K+ EKK+E KP+ I +S E E+ + ++ A
Sbjct: 156 KVRVVEVKKEERKE--------------EKKEEKKEEEKPK-IKMSKKEREIMRKLEHA 199
Score = 30.8 bits (68), Expect = 5.6
Identities = 26/118 (22%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 240 PYLAVNKIGLERVEEMKKDEWNNDDNCEGNLQVLKEMKIDLENVEKENKEMKRVLDEMKM 299
P +V ++ E +E+ +K++ E + ++ +++ E ++E KE K+ ++ K+
Sbjct: 124 PKKSVEELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKI 183
Query: 300 GVSKGK---VSKQKHAGESVQSWGSNKNGRKENEKKQEIK----PQNIVVSDFESELE 350
+SK + + K +HA E + K +++ +K++E+K P+ I V + L+
Sbjct: 184 KMSKKEREIMRKLEHAVEKEKK-KQEKREKEKKKKEEEVKIIYIPEVITVRELAELLD 240
>SMC_METJA (Q59037) Chromosome partition protein smc homolog
Length = 1169
Score = 36.6 bits (83), Expect = 0.10
Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 244 VNKIGLERVEEMKKD------EWNNDDNC-EGNLQVLKEMKIDLENVEKENKEMKRVLDE 296
+N+ G E V E+ K E ND + ++ LK++++++EN +KE KE ++ + E
Sbjct: 287 LNEKGNEEVLELHKSIKELEVEIENDKKVLDSSINELKKVEVEIENKKKEIKETQKKIIE 346
Query: 297 MKMGVSKGKVSKQKHAGESVQSWGSNKNGRKENEKKQEIKPQNIVVSDFESELEKAIKAA 356
++ + +++ + ++ N N KE K+ + ++I+ ESE+E A + A
Sbjct: 347 -----NRDSIIEKEQQIKEIEEKIKNLNYEKERLKEAIAESESIIKHLKESEMEIADEIA 401
Score = 31.2 bits (69), Expect = 4.3
Identities = 23/108 (21%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 252 VEEMKKDEWNNDDNCEGNLQVLKEMKID----LENVEKENKEMKRVLDEMKMGVSK--GK 305
+E +KK+E + E N +KE+++ LE +E+ N + + +L+ + SK
Sbjct: 720 LEIIKKNEMRKREIAEKNTIKIKELELKNKDILEELEELNLKREEILNRINEIESKINEL 779
Query: 306 VSKQKHAGESVQSWGSNKNGRKENEKKQEIKPQNIVVSDFESELEKAI 353
+ +++ ++ + S++N ++ NE + E+K + ++E++K +
Sbjct: 780 IERREKIINELKEYESDENLKRMNEIEGELKILEKEKAKLKNEIDKGL 827
>MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isoform
(MyHC-beta)
Length = 1935
Score = 36.6 bits (83), Expect = 0.10
Identities = 35/118 (29%), Positives = 58/118 (48%), Gaps = 17/118 (14%)
Query: 242 LAVNKIGLE-RVEEMKKDEWNNDDNCEGNLQVLKEMKIDLENVEKENKEMKRVLDEMKMG 300
L NKI LE +V+EM + E ++ E+ NVE E E+KR +D++++
Sbjct: 908 LIKNKIQLEAKVKEMT-------ERLEDEEEMNAELTAKKRNVEDECSELKRDIDDLELT 960
Query: 301 VSKGKVSKQKHAGES-VQSWGSNKNGRKE------NEKKQEIKPQNIVVSDFESELEK 351
++ KV K+KHA E+ V++ G E EKK + + D ++E +K
Sbjct: 961 LA--KVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 1016
>RA50_METJA (Q58718) DNA double-strand break repair rad50 ATPase
Length = 1005
Score = 36.2 bits (82), Expect = 0.13
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 251 RVEEMKKDEWNND-DNCEGNLQVLKEMKIDLENVEKEN--------------KEMKRVLD 295
R+ ++ ++ N D ++ E +L+ ++E K LEN++KE K +K++LD
Sbjct: 434 RINKLLEETKNIDIESIENSLKEIEEKKKVLENLQKEKIELNKKLGEINSEIKRLKKILD 493
Query: 296 EMKMGVSKGKVSKQKHAGESVQSWGSNKNGRKENEKKQEIKPQNIVVSDFESELEKAIK 354
E+K K + K E+ + N++ + N K E++ N + + E ++EK K
Sbjct: 494 ELKEVEGKCPLCKTP-IDENKKMELINQHKTQLNNKYTELEEINKKIREIEKDIEKLKK 551
>RA50_AQUAE (O67124) Probable DNA double-strand break repair rad50
ATPase
Length = 978
Score = 36.2 bits (82), Expect = 0.13
Identities = 27/110 (24%), Positives = 53/110 (47%), Gaps = 17/110 (15%)
Query: 242 LAVNKIGLERVEEMKKDEWNNDDNCEGNLQVLKE---------------MKIDLENVEKE 286
+ +N +GLE +E++++ N EG + LK+ ++ L+N+E+E
Sbjct: 156 ILINLLGLEELEKVRQLASETFKNLEGKREALKKEYELLKDYTPTKKEVLEKTLKNLEEE 215
Query: 287 NKEMKRVLDEMKMGVSKG--KVSKQKHAGESVQSWGSNKNGRKENEKKQE 334
KE+K ++++ + K K S ++ + V +N KE EK +E
Sbjct: 216 LKELKETEEKLRQELKKAEEKDSLERELSQVVTKLKELENLEKEVEKLRE 265
>MUC3_HUMAN (Q02505) Mucin 3A (Intestinal mucin 3A) (Fragments)
Length = 213
Score = 36.2 bits (82), Expect = 0.13
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 15 QTPQTQIMTAKVPITIFNNPLLSTITATNNYSTSDFSFSLSTNFPTGPTFK--LSYTPTT 72
+TP + IT P ST + T++ +T+D + T + + P+F ++ T TT
Sbjct: 6 ETPSHSTPSFTSSITTTEAPSSSTPSFTSSITTTDSIVTTETTYHSTPSFTSLITITETT 65
Query: 73 TSSSLPFSLSLKSGLGLFGSPNHSPLVFSANFSLSSL-SSSTPLLPSFSL------HFKP 125
+ S+ ++ S+ S +P+HS ++ + + + + S STP S + H P
Sbjct: 66 SHSTPSYTTSITS----TKTPSHSTPSYTTSITTTEIPSHSTPSFTSSIITTETTSHSTP 121
Query: 126 QFGHFSLHKTVLSDSSNTNPLSVS 149
F + T SS T + S
Sbjct: 122 SFTSSMFNSTASLTSSMTTTETTS 145
>WSC4_YEAST (P38739) Cell wall integrity and stress response
component 4 precursor
Length = 605
Score = 35.8 bits (81), Expect = 0.17
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 16 TPQTQIMTAKVPITIFNNPLLSTITATNNYSTSDFSFSLSTNFPTGPTFKLSYTPTTTSS 75
TP T I T+ +P T S T+T + +++ S S ST+ T S T +TTSS
Sbjct: 170 TPSTDI-TSALPTTTSTKLSTSIPTSTTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTTSS 228
Query: 76 SLPFSLSLKSGLGLFGSPNHSPLVFSANFSLSSLSSST 113
+L + + S + + +P+ S S S+ +S+T
Sbjct: 229 TLISTSTSSSSSSTPTTTSSAPISTSTTSSTSTSTSTT 266
Score = 32.3 bits (72), Expect = 1.9
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 23/208 (11%)
Query: 10 NNENQQTPQTQIMTAKVPITIFNNPLLSTITATNNYSTSDFSFSLSTNFPTGPTFKLSYT 69
++ + TP T T+ PI+ ST T+T + ++S S S PT TF + +
Sbjct: 236 SSSSSSTPTT---TSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTT-S 291
Query: 70 PTTTSSSLPFSLSLKSGLGLFGSPNHSPLVFSANFSLSSLSSSTPLLPSFSLHFKPQFGH 129
P+T SS + + + + + L S +S+ +++S + + S + +
Sbjct: 292 PSTAPSSTTVTYTSTTASPITSTITSVNLQTSLKYSVITVTSVHTMDTNIS---EITSRY 348
Query: 130 FSLHKTVLSDSSNTNPLSVSPQIEKGFVPETNGSCSGWQNLNLEPFGHNNNNNVGVGVGV 189
++ K + S+T L +P V T+ S G N NN+N
Sbjct: 349 LTMKKVITQIYSST--LGATP---TSAVATTSASVGGRITNN------NNSNTTNSNT-- 395
Query: 190 GVGPDGKNNEKCGLSPCVGVMARTVMPV 217
P K+ EK G G +A T + V
Sbjct: 396 ---PTNKSTEKKGYWDSPGKIAATFVVV 420
>BRC1_DROME (Q01295) Broad-complex core-protein isoforms 1/2/3/4/5
Length = 727
Score = 35.8 bits (81), Expect = 0.17
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
Query: 3 LSLKFQNNNENQQTPQTQIMT-AKVPITIFNNPLLSTITATNNYSTSDFSFSLSTNFPTG 61
L+ + Q + + +PQ ++ T A T NN + + NN + +++ +SL T
Sbjct: 416 LNTQLQQSGDLAVSPQGKLTTNATTTTTTINNSITNN---NNNNNNNNYDYSLPTKNSNS 472
Query: 62 -----PTFKLSYTPTTTSSSLPFSLSLKSGL-GLFGSPNHSPLVFSANFSLSSLS----S 111
PT TPTTT+ + P +++ SG+ GL S F+AN S S S S
Sbjct: 473 QKTPSPTTTTLTTPTTTTPTRPTAITSASGICGLNLS------TFAANGSSSGGSNGGLS 526
Query: 112 STPLLP 117
T LLP
Sbjct: 527 MTALLP 532
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in
chromosome I
Length = 536
Score = 35.4 bits (80), Expect = 0.23
Identities = 36/115 (31%), Positives = 52/115 (44%), Gaps = 7/115 (6%)
Query: 42 TNNYSTSD--FSFSLSTNFPTGPTFKLSYTPTTTSSSLPFS----LSLKSGLGLFGSPNH 95
TNN S+ D S S S++ P + + T ++SS +P S LS S + S +
Sbjct: 4 TNNTSSVDTSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSS 63
Query: 96 SPLVFSANFSLSSLSSSTPLLPSFSLHFKPQFGHF-SLHKTVLSDSSNTNPLSVS 149
SPL S+ S +S S T L+ S S S L+ SS+ +P S S
Sbjct: 64 SPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSS 118
Score = 32.3 bits (72), Expect = 1.9
Identities = 34/114 (29%), Positives = 56/114 (48%), Gaps = 7/114 (6%)
Query: 36 LSTITATNNYSTSDFSFSLSTNFPTGPTFKLSYTPTTTSSSLPFSLSLKSGLGLFGSPNH 95
+S+ ++++ S+S F+ S++F T L + + SSS SL+ S L S +
Sbjct: 57 ISSSSSSSPLSSSSFTSPASSSFIT----SLVSSSSQQSSSSSASLTSSSSATLTSSSSA 112
Query: 96 SPLVFSANFSLSSLSSSTPLLPSFSLHFKPQFGHFSLHKTVLSDSSNTNPLSVS 149
SP S++ +LSS SSS S S H S +V S SS+ + S++
Sbjct: 113 SPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSS---SVPSSSSSYHSSSMT 163
Score = 30.8 bits (68), Expect = 5.6
Identities = 40/177 (22%), Positives = 75/177 (41%), Gaps = 20/177 (11%)
Query: 32 NNPLLSTITATNNYSTSDFSFSLSTNFPTGPTFKLSYTPTTTSSSLPFSLSLKSGLGLFG 91
++ ++++ ++++ +S S SL+++ T S +PT++SSS S S S L
Sbjct: 76 SSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSS---LVA 132
Query: 92 SPNHSPLVFSANFSLSSLSSSTPLLPSFSLHFKPQFGHFSLHKTVLSDSSNTNPLSVSPQ 151
S + S + S+ SS+ SS+ S S+ S+ + D + L +
Sbjct: 133 SSSSSGMSSSSLSHSSSVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSY 192
Query: 152 IEKGFVPET----NGSCSGWQNLNLEPF-------------GHNNNNNVGVGVGVGV 191
+ + P T N S S + + P + ++N+VGV VG V
Sbjct: 193 VSEVVTPTTTNNWNSSSSFTSSTSSTPISSSYSSSGTLPSKSNKSSNHVGVVVGCSV 249
>MU15_BOVIN (Q8MI01) Mucin 15 precursor (PASIII) (PAS3)
(Glycoprotein C) (Glycoprotein 4) (Component II)
Length = 330
Score = 35.4 bits (80), Expect = 0.23
Identities = 44/165 (26%), Positives = 70/165 (41%), Gaps = 27/165 (16%)
Query: 32 NNPLLSTIT---ATNNYSTSDFSFSLST-NFPTGPTFKLSYTPTTTS-----SSLPFSLS 82
+NP S + +N + F +LST N P+ + +P + S S LP++ S
Sbjct: 65 SNPKASNFSFEDPSNKTHETGFYSNLSTDNSSRSPSLMPTLSPRSPSTHSFVSKLPWNSS 124
Query: 83 L--KSGLGLFGSPNHSPLVFSANFSLSSLSSSTPLLPSFSLHFKPQFGHFSLHKTVLSDS 140
+ S L PN + V S NF+LSS++ + + S+ TV +
Sbjct: 125 IADNSLLPASAPPNTTVPVSSENFTLSSINDTMKAPDNSSI-------------TVSNLP 171
Query: 141 SNTNPLSVSPQIEKGFVPETNGSCSG---WQNLNLEPFGHNNNNN 182
S N SV+P + +G+ T S G +Q L P NN+
Sbjct: 172 SGPNTTSVTPMVTEGWPTTTRESMEGFTVYQETTLHPTLKFTNNS 216
>CYL1_BOVIN (P35662) Cylicin I (Multiple-band polypeptide I)
Length = 667
Score = 35.4 bits (80), Expect = 0.23
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 253 EEMKKDEWNNDDNCEGNLQVLKEMKIDLENVEKENKEMKRVLDEMKMGVSKGKVSKQKHA 312
+ KKD + ++ + K+ K D + +K++K+ D+ K K S +
Sbjct: 383 DNKKKDAKKDAESTDAESGDSKDAKKDSKKGKKDSKK-----DDKKKDAKKDAESTDAES 437
Query: 313 GESVQSWGSNKNGRKENEKKQEIKPQNIVVSDFESELEKAIKAAAASS 360
G+S + +K G+K+++KK K + V +D +SE E K + S
Sbjct: 438 GDSKNAKKDSKKGKKDDKKKDAKK--DAVSTDADSESEGDAKKSKKDS 483
Score = 30.8 bits (68), Expect = 5.6
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 247 IGLERVEEMKKDEW-----NNDDNCEGNLQVLKEMK---IDLENVEKEN--KEMKRVLDE 296
+G E M+ D W N+ K+ K D E+V+ ++ K+ K +
Sbjct: 257 LGESDAESMEFDMWLKNYSQNNSKKPTKKDAKKDAKGKGSDAESVDSKDAKKDKKGATKD 316
Query: 297 MKMGVSKGKVSKQKHAGESVQSWGSNKNGRKENEKKQEIKPQNIVVSDFESELEKAIK 354
K G K S +G+S + K G+KE++K ++ + SD ES K K
Sbjct: 317 TKKGAKKDTESTDAESGDSKDA----KKGKKESKKDKKKDAKKDAASDAESGDSKDAK 370
>YM96_YEAST (Q04893) Hypothetical 113.1 kDa protein in PRE5-FET4
intergenic region
Length = 1140
Score = 35.0 bits (79), Expect = 0.29
Identities = 31/144 (21%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 13 NQQTPQTQIMTAKVPITIFNNPLLSTITATNNYSTSDFSFSLSTNFPTGPTFKLSYTPTT 72
+ + T ++T + + + ST+ ++ S + +SFS + PT T S P+T
Sbjct: 666 SSMSSHTSVITPGFSTSSASLAINSTVVSS---SLAGYSFSTPESSPTTSTLVTSEAPST 722
Query: 73 TSSSLPFSLSLKSGLGLFGSPNHSPLVFSANFSLSSLS-SSTPLLPSFSLHFKPQFGHFS 131
SS + + + SP+ + + + S+SS+ +S + S + H F S
Sbjct: 723 VSSMTTSAPFINNSTSARPSPSTASFITESTSSISSVPLASGDVTSSLAAHNLTTFSAPS 782
Query: 132 LHKT-VLSDSSNTNPLSVSPQIEK 154
++S S+ ++ + V+P+I++
Sbjct: 783 TSSAQLVSKSTTSSSILVTPRIDR 806
Score = 31.2 bits (69), Expect = 4.3
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 37 STITATNNYSTSDFSFSLSTNFPTGPTFKLSYTPTTTSSSLP-----FSLSLKSGLGLFG 91
S+ T+T +T+ + + ST T P +S + T SS +P SLS + +
Sbjct: 23 SSTTSTTTPTTTSTTSTTSTKVTTSPEIIVSSSSTLVSSVVPEFTSSSSLSSDTIASILS 82
Query: 92 SPNHSPLVFSANFSLSSLSSSTPLLPSFSLHFKPQFGHFSLHKT-VLSDSSNTNPLSVSP 150
S + + S +++ S + SST + S P + +L T SS T S+S
Sbjct: 83 SESLVSIFSSLSYTSSDI-SSTSVNDVESSTSGPSNSYSALSSTNAQLSSSTTETDSISS 141
Query: 151 QIEKGFVPETNGSCSGWQNLNLEPFGHNN 179
+ P+T+ S G + EP G ++
Sbjct: 142 SAIQTSSPQTSSSNGG--GSSSEPLGKSS 168
>INV4_YEAST (P10596) Invertase 4 precursor (EC 3.2.1.26)
(Beta-fructofuranosidase 4) (Saccharase)
Length = 532
Score = 35.0 bits (79), Expect = 0.29
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 1 MKLSLKFQNNNENQQTPQTQIMTAKV-PITIFNNPLLSTITATNNYSTSDFSFSLSTNFP 59
M L KF N E Q P+T+++ K PI +N A+N+ T SFS+ +
Sbjct: 326 MSLVRKFSLNTEYQANPETELINLKAEPILNISNAGPWLHFASNSTLTKANSFSVDLSNS 385
Query: 60 TGP-TFKLSYTPTTTSSSLPFSLSLKSGLGLF 90
TG F+L Y TT S S S+ S L L+
Sbjct: 386 TGTLEFELVYAVNTTQS---VSKSVFSDLSLW 414
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.310 0.128 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,542,431
Number of Sequences: 164201
Number of extensions: 2052846
Number of successful extensions: 6705
Number of sequences better than 10.0: 161
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 6374
Number of HSP's gapped (non-prelim): 367
length of query: 360
length of database: 59,974,054
effective HSP length: 111
effective length of query: 249
effective length of database: 41,747,743
effective search space: 10395188007
effective search space used: 10395188007
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Medicago: description of AC144516.4