BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144515.9 + phase: 0
(207 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AMEL_MONDO (Q28462) Amelogenin 33 0.61
Y610_ENCCU (Q8SVF2) Hypothetical protein ECU06_0100 32 0.80
AMEX_BOVIN (P02817) Amelogenin, class I precursor 32 1.0
THIO_PENCH (P34723) Thioredoxin 31 1.8
COTT_BACSU (P11863) Spore coat protein T precursor 31 1.8
ZAP3_HUMAN (P49750) Nuclear protein ZAP3 (ZAP113) 31 2.3
YKU4_YEAST (P36041) Hypothetical 69.8 kDa protein in LOS1-TOR2 i... 31 2.3
YIT0_YEAST (P40568) Hypothetical 65.7 kDa protein in PRI1-DBF8 i... 31 2.3
ZAP3_MOUSE (Q9R0I7) Nuclear protein ZAP3 30 3.0
Y066_NPVAC (P41467) Hypothetical 94.0 kDa protein in POL-LEF3 in... 30 3.0
LMG2_HUMAN (Q13753) Laminin gamma-2 chain precursor (Kalinin/nic... 30 3.0
YNM4_YEAST (P53919) Hypothetical 54.9 kDa protein in SPC98-TOM70... 30 4.0
WBP2_RAT (Q8R478) WW domain binding protein 2 (WBP-2) 30 4.0
NIFA_AZOLI (P54929) Nif-specific regulatory protein 30 4.0
HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1) 30 4.0
YSND_BACSU (P94563) Hypothetical protein ysnD 30 5.2
YO86_CAEEL (P34622) Hypothetical protein ZK1236.6 in chromosome III 30 5.2
WBP2_MOUSE (P97765) WW domain binding protein 2 (WBP-2) 30 5.2
PAX1_HUMAN (P15863) Paired box protein Pax-1 (HUP48) 30 5.2
HXA3_MOUSE (P02831) Homeobox protein Hox-A3 (Hox-1.5) (MO-10) 30 5.2
>AMEL_MONDO (Q28462) Amelogenin
Length = 202
Score = 32.7 bits (73), Expect = 0.61
Identities = 21/44 (47%), Positives = 23/44 (51%), Gaps = 4/44 (9%)
Query: 163 PINAAQMP--PSYPYVPY-SQHPFFPPFYHQYPLP-PGQNSLFP 202
PI AAQ P P P +P QHP P +HQ LP PGQ P
Sbjct: 71 PIMAAQQPAPPQQPVMPVPGQHPMAPTQHHQPNLPQPGQQPYQP 114
>Y610_ENCCU (Q8SVF2) Hypothetical protein ECU06_0100
Length = 261
Score = 32.3 bits (72), Expect = 0.80
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 70 PALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIV 121
P DE E+ + +LKT+ D+ M+IA P + MG L+E V+ + +
Sbjct: 12 PTRDESELIRMYLKTIICDFKAPMLIAFP------ILMGLMLKETVKSSLFL 57
>AMEX_BOVIN (P02817) Amelogenin, class I precursor
Length = 213
Score = 32.0 bits (71), Expect = 1.0
Identities = 15/41 (36%), Positives = 19/41 (45%), Gaps = 1/41 (2%)
Query: 156 QSMATVAPINAAQ-MPPSYPYVPYSQHPFFPPFYHQYPLPP 195
Q M + P+ Q PP +P P P PP + PLPP
Sbjct: 151 QPMQPLQPLQPLQPQPPVHPIQPLPPQPPLPPIFPMQPLPP 191
>THIO_PENCH (P34723) Thioredoxin
Length = 106
Score = 31.2 bits (69), Expect = 1.8
Identities = 24/85 (28%), Positives = 35/85 (40%), Gaps = 5/85 (5%)
Query: 34 TRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERM 93
T +K E+ ++ ++ W G I PAL++ T T ++ K D E
Sbjct: 4 TPIKSVAEYKEKVTDATGPVVVDFHATWCGPCKAIAPALEKLSETHTGIQFYKVDVDELS 63
Query: 94 IIAAPNNFSEMVTM-----GTRLEE 113
+AA N S M T G R EE
Sbjct: 64 EVAASNGVSAMPTFHFYKGGERNEE 88
>COTT_BACSU (P11863) Spore coat protein T precursor
Length = 82
Score = 31.2 bits (69), Expect = 1.8
Identities = 20/63 (31%), Positives = 28/63 (43%), Gaps = 18/63 (28%)
Query: 156 QSMATVAPINAAQ-------MPPSYP--YVPYSQHPFFP-----PFYHQYPLPPGQNSLF 201
QS + P + Q PP YP Y P +PF+P P+Y+ P PP +
Sbjct: 8 QSFEQITPYDERQPYYYPRPRPPFYPPYYYPRPYYPFYPFYPRPPYYYPRPRPP----YY 63
Query: 202 PFY 204
P+Y
Sbjct: 64 PWY 66
>ZAP3_HUMAN (P49750) Nuclear protein ZAP3 (ZAP113)
Length = 1822
Score = 30.8 bits (68), Expect = 2.3
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 169 MPPSYPYVPYSQHP--FFPPFYHQYPLPPGQNS 199
MPPS Y+P Q P ++PP Q LPP Q S
Sbjct: 158 MPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPS 190
>YKU4_YEAST (P36041) Hypothetical 69.8 kDa protein in LOS1-TOR2
intergenic region
Length = 632
Score = 30.8 bits (68), Expect = 2.3
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 9/90 (10%)
Query: 118 GIIVFEKAESSVNASKRYGNGHHKKKETEVGMVSAGAGQSMATVAPINAAQMPPSYPYVP 177
G++ F+K VN K+ + K S G + AT MPP P
Sbjct: 486 GLVQFQKDSKDVN--KKEDRQLRQNKNPNGTRNSKGKQEETATPDLPQQQYMPPPPPPGF 543
Query: 178 YSQHPFF-----PPFYHQYPLPPGQNSLFP 202
+ HP F PP +P+PP N + P
Sbjct: 544 FPMHPNFPNGPMPPLPQGFPIPP--NGMLP 571
>YIT0_YEAST (P40568) Hypothetical 65.7 kDa protein in PRI1-DBF8
intergenic region
Length = 576
Score = 30.8 bits (68), Expect = 2.3
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 14/106 (13%)
Query: 106 TMGTRLEEAVRDGIIVFEKAESSVNASKRYGNGHHKKKETEVGMVSAGAGQSMATVAPIN 165
T+G RL+ ++D I K + N+S + +H T +A A + A +N
Sbjct: 87 TLGERLDN-LQD--IKKAKRVENFNSSAPIADDNHSGDAT----ANATANATANATANVN 139
Query: 166 AAQMPPSYPYVPYSQHPFFPPFYHQYPLPPG-------QNSLFPFY 204
A+ MP Y Y HP P P P +SL PFY
Sbjct: 140 ASAMPAPYMPYYYYYHPMNAPTPAMIPYPGSPMHSIMPNSSLQPFY 185
>ZAP3_MOUSE (Q9R0I7) Nuclear protein ZAP3
Length = 1386
Score = 30.4 bits (67), Expect = 3.0
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 169 MPPSYPYVPYSQHP--FFPPFYHQYPLPPGQNS 199
MPPS Y+P Q P ++PP Q LPP Q S
Sbjct: 159 MPPSQSYMPPPQPPPSYYPPSSAQPYLPPAQPS 191
>Y066_NPVAC (P41467) Hypothetical 94.0 kDa protein in POL-LEF3
intergenic region
Length = 808
Score = 30.4 bits (67), Expect = 3.0
Identities = 16/43 (37%), Positives = 22/43 (50%), Gaps = 8/43 (18%)
Query: 162 APINAAQMPPSYPYVP-------YSQHPFFPPFYHQYPLPPGQ 197
AP+ A Q PP P P Y+ +P++PP+ P PP Q
Sbjct: 99 APVPAMQPPPPPPQPPAPPQPPYYNNYPYYPPYPFSTP-PPTQ 140
>LMG2_HUMAN (Q13753) Laminin gamma-2 chain precursor
(Kalinin/nicein/epiligrin 100 kDa subunit) (Laminin B2t
chain) (Cell-scattering factor 140 kDa subunit) (CSF 140
kDa subunit) (Large adhesive scatter factor 140 kDa
subunit) (Ladsin 140 kDa subunit)
Length = 1193
Score = 30.4 bits (67), Expect = 3.0
Identities = 29/137 (21%), Positives = 57/137 (41%), Gaps = 16/137 (11%)
Query: 20 DELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQ 79
+ L+ + Y + LK REF + +K E+ E +R + +++ A D+ + +
Sbjct: 936 EALSMGNATFYEVESILKNLREFDLQVDNRKAEA-EEAMKRLSYISQKVSDASDKTQQAE 994
Query: 80 TFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAV----------RDGIIVFEKAESSV 129
L + D A N E + + + +E+ + DG + EK +S+
Sbjct: 995 RALGSAAADAQR-----AKNGAGEALEISSEIEQEIGSLNLEANVTADGALAMEKGLASL 1049
Query: 130 NASKRYGNGHHKKKETE 146
+ R G ++KE E
Sbjct: 1050 KSEMREVEGELERKELE 1066
>YNM4_YEAST (P53919) Hypothetical 54.9 kDa protein in SPC98-TOM70
intergenic region
Length = 492
Score = 30.0 bits (66), Expect = 4.0
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 168 QMPPSYPYVPYSQHPFFPPFYHQYPLPP 195
Q P PY PYS PF P QYP PP
Sbjct: 364 QQPNGMPYPPYS--PFPQPTNFQYPPPP 389
>WBP2_RAT (Q8R478) WW domain binding protein 2 (WBP-2)
Length = 262
Score = 30.0 bits (66), Expect = 4.0
Identities = 19/65 (29%), Positives = 30/65 (45%), Gaps = 5/65 (7%)
Query: 136 GNGHHKKKETEVGMVSAGAGQSMATVAPINAAQMPPS---YPYVPYSQHPFFPPFYH-QY 191
G+ +K T G + G Q + + + ++P YPY+P + F PP + Y
Sbjct: 106 GSASYKLTFTAGGAIEFGQ-QMLQVASQASRGEVPNGAYGYPYMPSGAYVFPPPVANGMY 164
Query: 192 PLPPG 196
P PPG
Sbjct: 165 PCPPG 169
>NIFA_AZOLI (P54929) Nif-specific regulatory protein
Length = 624
Score = 30.0 bits (66), Expect = 4.0
Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 8/106 (7%)
Query: 98 PNNFSEMVTMGTRLEEAVRDGIIVFEKAESSVNASKRYGNGHHKKKETEVGMVSAGAGQS 157
P N E+ R RDGII E S+N ++ VG ++ G
Sbjct: 416 PGNVRELENCIERAATQSRDGIIRTESLSCSLNLCNSSVLFQYRTLGASVGGLAPSMG-- 473
Query: 158 MATVAPINAAQMPPSYPYVPY-SQHPFFPPFYHQYPLPPGQNSLFP 202
P + ++PP P VP + P P P P G S +P
Sbjct: 474 -----PGSVNRVPPGRPGVPAPANAPKAPAMPAPVPEPAGAGSAWP 514
>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)
Length = 401
Score = 30.0 bits (66), Expect = 4.0
Identities = 17/46 (36%), Positives = 23/46 (49%), Gaps = 3/46 (6%)
Query: 151 SAGAGQSMATVAPINAAQMPPSYPYV-PYSQHPFFPPFYHQYPLPP 195
S+G+ V+P A PP+ P + P + HP PP H P PP
Sbjct: 38 SSGSDGDSVPVSPQPAPPSPPAAPCLPPLAHHPHLPP--HPPPPPP 81
>YSND_BACSU (P94563) Hypothetical protein ysnD
Length = 111
Score = 29.6 bits (65), Expect = 5.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 171 PSYPYVPYSQHPFFPPFYHQYPLPPG 196
PS+P P +P PPFY Q P G
Sbjct: 16 PSFPNFPQQYYPAVPPFYQQSQQPFG 41
>YO86_CAEEL (P34622) Hypothetical protein ZK1236.6 in chromosome III
Length = 206
Score = 29.6 bits (65), Expect = 5.2
Identities = 15/35 (42%), Positives = 16/35 (44%), Gaps = 1/35 (2%)
Query: 164 INAAQMPPSYPYVPYSQHPFFPPFYH-QYPLPPGQ 197
+ A P P PY Q PF P F QY P GQ
Sbjct: 23 VGAGAAPTMAPQNPYGQQPFQPQFQQGQYQQPSGQ 57
>WBP2_MOUSE (P97765) WW domain binding protein 2 (WBP-2)
Length = 261
Score = 29.6 bits (65), Expect = 5.2
Identities = 22/69 (31%), Positives = 30/69 (42%), Gaps = 8/69 (11%)
Query: 136 GNGHHKKKETEVGMVSAGA---GQSMATVAPINAAQMPPS----YPYVPYSQHPFFPPFY 188
G G ++ + GA GQ M VA + P+ YPY+P + F PP
Sbjct: 101 GGGWEGSASYKLTFTAGGAIEFGQRMLQVASQASRGEVPNGAYGYPYMPSGAYVFPPPVA 160
Query: 189 H-QYPLPPG 196
+ YP PPG
Sbjct: 161 NGMYPCPPG 169
>PAX1_HUMAN (P15863) Paired box protein Pax-1 (HUP48)
Length = 361
Score = 29.6 bits (65), Expect = 5.2
Identities = 14/38 (36%), Positives = 20/38 (51%), Gaps = 7/38 (18%)
Query: 157 SMATVAPINAAQMPPSYPYVPYSQHPFFPPFYHQYPLP 194
S+A P A++ PPS P +PY+ +QYP P
Sbjct: 133 SLAQPGPYEASKQPPSQPTLPYNH-------IYQYPYP 163
>HXA3_MOUSE (P02831) Homeobox protein Hox-A3 (Hox-1.5) (MO-10)
Length = 443
Score = 29.6 bits (65), Expect = 5.2
Identities = 21/64 (32%), Positives = 29/64 (44%), Gaps = 8/64 (12%)
Query: 140 HKKKETEVGMVSAGAGQSMA-TVAPINAA-------QMPPSYPYVPYSQHPFFPPFYHQY 191
+KK + GM+++ GQS + + P A + S PY P S PF P Y
Sbjct: 247 YKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSKPPQGAY 306
Query: 192 PLPP 195
LPP
Sbjct: 307 GLPP 310
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,596,464
Number of Sequences: 164201
Number of extensions: 949873
Number of successful extensions: 3606
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 3572
Number of HSP's gapped (non-prelim): 59
length of query: 207
length of database: 59,974,054
effective HSP length: 105
effective length of query: 102
effective length of database: 42,732,949
effective search space: 4358760798
effective search space used: 4358760798
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC144515.9