BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144513.9 + phase: 0 
         (261 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YEK9_SCHPO (O36021) Hypothetical protein C4F10.09c in chromosome I     38  0.028
FBX8_MOUSE (Q9QZN3) F-box only protein 8                               36  0.082
FBX8_HUMAN (Q9NRD0) F-box only protein 8 (F-box/SEC7 protein FBS...    35  0.18
SYE_THEAC (Q9HJM5) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta...    31  2.6
POF1_SCHPO (P87053) F-box/WD-repeat protein pof1 (Skp1-binding p...    31  3.5
FXL5_MOUSE (Q8C2S5) F-box/LRR-repeat protein 5 (F-box and leucin...    31  3.5
FBX4_HUMAN (Q9UKT5) F-box only protein 4                               30  4.5
CAPP_AMAHP (Q43299) Phosphoenolpyruvate carboxylase (EC 4.1.1.31...    30  4.5
YQ01_CAEEL (Q09445) Hypothetical protein C04A2.1 in chromosome II      30  7.7
YDG8_SCHPO (Q10495) Hypothetical protein C26F1.08c in chromosome I     30  7.7
VG7_BPPZA (P07533) Head morphogenesis protein (Late protein GP7)       30  7.7
PYRG_LISIN (Q927T4) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga...    30  7.7
FX16_MOUSE (Q9QZM9) F-box only protein 16                              30  7.7

>YEK9_SCHPO (O36021) Hypothetical protein C4F10.09c in chromosome I
          Length = 860

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)

Query: 24  VSLLSSVVQSMADSDFLWEKFLPHKYQEIISRLVDPPLPCSSKKELFARLCKPSLIDDGN 83
           V +L  + Q+ A  DF+ +++    Y+ +   L+DP L  SSK+ L+  L   SLI D N
Sbjct: 411 VQVLMLIFQASASRDFISDRY----YKSLYESLLDPRLTTSSKQSLYLNLLYKSLIIDNN 466


>FBX8_MOUSE (Q9QZN3) F-box only protein 8
          Length = 319

 Score = 36.2 bits (82), Expect = 0.082
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 1   MELLPEDCFAHILSFTSPLDVCRVSLLSSVVQSMADSDFLWEKFLPHKYQEIISRLVDPP 60
           +E+LP +    ILS+ + +D+C   L S V Q +A+ + LW+      +        +PP
Sbjct: 71  LEMLPPELSFTILSYLNAIDLC---LASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPP 127

Query: 61  LPCSSKKELFARLCKPSLIDDGN 83
           L  S +K L+ +L + SL  + N
Sbjct: 128 LGFSFRK-LYMQLDEGSLTFNAN 149


>FBX8_HUMAN (Q9NRD0) F-box only protein 8 (F-box/SEC7 protein FBS)
           (DC10)
          Length = 319

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 1   MELLPEDCFAHILSFTSPLDVCRVSLLSSVVQSMADSDFLWEKFLPHKYQEIISRLVDPP 60
           +E+LP +    ILS+ +  D+C   L S V Q +A+ + LW+      +        +PP
Sbjct: 71  LEMLPPELSFTILSYLNATDLC---LASCVWQDLANDELLWQGLCKSTWGHCSIYNKNPP 127

Query: 61  LPCSSKKELFARLCKPSLIDDGN 83
           L  S +K L+ +L + SL  + N
Sbjct: 128 LGFSFRK-LYMQLDEGSLTFNAN 149


>SYE_THEAC (Q9HJM5) Glutamyl-tRNA synthetase (EC 6.1.1.17)
           (Glutamate--tRNA ligase) (GluRS)
          Length = 548

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 32/136 (23%), Positives = 64/136 (46%), Gaps = 34/136 (25%)

Query: 130 ELRTICWLEIKGSINSEMLSPKTMYGAYLKVKIADRAYGLDSLPSEVSI-----EVG--N 182
           E+  I  +EI  SIN E++ P+    +++K  +  R  G+ ++ +++ +     E G   
Sbjct: 380 EIDAIFSIEIFDSINREIVDPRAYRFSFVKDPVPVRIEGMPNISAKLPLHPTHPEYGFRE 439

Query: 183 YKSQENVYIRSQSKRNGKAYCHCNCEHNDEWLEIKLGSFYTEKVQVQEVRMCLKEVKGVH 242
           Y+ + +VYI S+                 ++  I  G    E++++++  +C    KG  
Sbjct: 440 YEVKGSVYIASR-----------------DFAAISEG----ERIRLKD--LCYIRKKG-- 474

Query: 243 LKGGLIVDGIELRPKT 258
              G+I DG+E+  KT
Sbjct: 475 --NGIIYDGVEMTEKT 488


>POF1_SCHPO (P87053) F-box/WD-repeat protein pof1 (Skp1-binding
           protein 1)
          Length = 605

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 1   MELLPEDCFAHILSFTSPLDVCRVSLLSSVVQSMADSDFLWEK 43
           + LLP +    ILSF     +C+ + +S   + +AD D +W +
Sbjct: 110 LSLLPVEISFRILSFLDARSLCQAAQVSKHWKELADDDVIWHR 152


>FXL5_MOUSE (Q8C2S5) F-box/LRR-repeat protein 5 (F-box and
           leucine-rich repeat protein 5)
          Length = 690

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 4   LPEDCFAHILSFTSPLDVCRVSLLSSVVQSMADSDFLWEKFLP 46
           LP +    I S+ +P ++CR S +S+    +A +  LW+   P
Sbjct: 208 LPPEVMLSIFSYLNPQELCRCSQVSTKWSQLAKTGSLWKHLYP 250


>FBX4_HUMAN (Q9UKT5) F-box only protein 4
          Length = 387

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/42 (35%), Positives = 21/42 (49%)

Query: 4   LPEDCFAHILSFTSPLDVCRVSLLSSVVQSMADSDFLWEKFL 45
           LP D   +ILSF SP D+C++   +        +  LW  FL
Sbjct: 62  LPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRNPILWRYFL 103


>CAPP_AMAHP (Q43299) Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
           (PEPCase)
          Length = 964

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/35 (42%), Positives = 19/35 (53%)

Query: 6   EDCFAHILSFTSPLDVCRVSLLSSVVQSMADSDFL 40
           E  F HI  F  PL++C  SL +S  Q +AD   L
Sbjct: 397 ESTFTHIDQFLEPLELCYKSLCASGDQPIADGSLL 431


>YQ01_CAEEL (Q09445) Hypothetical protein C04A2.1 in chromosome II
          Length = 330

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 15/40 (37%), Positives = 22/40 (54%), Gaps = 1/40 (2%)

Query: 41 WEKFLPHKYQEIISRLVDPPLPCSSKKELFARLCKPSLID 80
          WEK  P +   ++ R V   +P + +KEL+ R C PS  D
Sbjct: 59 WEKENPRRNSHLLQRFVRKGIPHTFRKELWLRSC-PSRAD 97


>YDG8_SCHPO (Q10495) Hypothetical protein C26F1.08c in chromosome I
          Length = 977

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 85  MFSIEKTTGKICYLLSARQLSITFGNTSLYWSWKQVQGSRFAEAAELRTICWLEIKGSIN 144
           +F +E T      +   R L    G    Y +W+  QG  +A A     I W+      N
Sbjct: 620 LFVLEVTVSTTLRVGLFRTLGTLSGAVYAYAAWEVSQGWSYAIATLTFAISWVSCYVKYN 679

Query: 145 SE---------MLSPKTMYGAYLK 159
           +E         +  P  +YG+YLK
Sbjct: 680 TEYSGIATVFNITFPPILYGSYLK 703


>VG7_BPPZA (P07533) Head morphogenesis protein (Late protein GP7)
          Length = 98

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 46 PHKYQEIISRLVDPPLPCSSKKELFARL 73
          P K++EI++ L+DP LP S + E   +L
Sbjct: 5  PEKHEEILNMLLDPELPQSERTEALQQL 32


>PYRG_LISIN (Q927T4) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase)
           (CTP synthetase)
          Length = 532

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 20/67 (29%), Positives = 33/67 (48%), Gaps = 8/67 (11%)

Query: 180 VGNYKSQENVYIRSQSKRNGKAYCHCNCEHNDEWLEIKLGSFYTEKVQVQEVRMCLKEVK 239
           VG Y S ++ Y+        +A  H   EH+    EI++    +EKV  + V   +K+V 
Sbjct: 296 VGKYVSLQDAYLSV-----AEALRHAGYEHD---AEIEIDWIDSEKVTKENVAEIMKDVD 347

Query: 240 GVHLKGG 246
           G+ + GG
Sbjct: 348 GILVPGG 354


>FX16_MOUSE (Q9QZM9) F-box only protein 16
          Length = 334

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 14/38 (36%), Positives = 21/38 (54%)

Query: 4   LPEDCFAHILSFTSPLDVCRVSLLSSVVQSMADSDFLW 41
           LP     +I SF  P  +CR + +S   +S+A+ D LW
Sbjct: 92  LPRVLSVYIFSFLDPRSLCRCAQVSWYWKSLAELDQLW 129


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.319    0.135    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,660,442
Number of Sequences: 164201
Number of extensions: 1201249
Number of successful extensions: 2571
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2563
Number of HSP's gapped (non-prelim): 13
length of query: 261
length of database: 59,974,054
effective HSP length: 108
effective length of query: 153
effective length of database: 42,240,346
effective search space: 6462772938
effective search space used: 6462772938
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)