BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144503.8 - phase: 0
(729 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YBV2_YEAST (P38261) Hypothetical 85.5 kDa protein in VPS15-YMC2 ... 41 0.013
KIP3_HUMAN (Q96Q77) Calcium and integrin-binding protein 3 (Kina... 38 0.083
RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E) 35 0.70
LPA3_HUMAN (O75145) Liprin-alpha 3 (Protein tyrosine phosphatase... 35 0.92
IF38_CAEEL (O02328) Probable eukaryotic translation initiation f... 35 0.92
GCC2_HUMAN (Q8IWJ2) GRIP and coiled-coil domain-containing prote... 35 0.92
MYSP_OPIFE (Q9BMQ6) Paramyosin (Fragment) 34 1.2
MUKB_SALTY (Q935S7) Chromosome partition protein mukB (Structura... 34 1.2
YIS1_STRCO (P19780) Insertion element IS110 hypothetical 43.6 kD... 34 1.6
CLR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor ... 34 1.6
LVA_DROME (Q8MSS1) Lava lamp protein 33 2.0
CPS_CLOTM (Q02929) Putative sensory transducer protein 33 2.0
CLR3_RAT (O88278) Cadherin EGF LAG seven-pass G-type receptor 3 ... 33 2.0
GAL1_CLOPE (Q8XKP9) Galactokinase (EC 2.7.1.6) (Galactose kinase) 33 2.7
SBCC_RHOCA (O68032) Nuclease sbcCD subunit C 33 3.5
MUKB_YERPE (Q8ZG99) Chromosome partition protein mukB (Structura... 33 3.5
MUKB_SALTI (Q8Z7Z5) Chromosome partition protein mukB (Structura... 33 3.5
LPA3_RAT (Q91Z79) Liprin-alpha 3 (Protein tyrosine phosphatase r... 33 3.5
LPA3_MOUSE (P60469) Liprin-alpha 3 (Protein tyrosine phosphatase... 33 3.5
HUTI_DEIRA (Q9RZ05) Imidazolonepropionase (EC 3.5.2.7) (Imidazol... 32 4.6
>YBV2_YEAST (P38261) Hypothetical 85.5 kDa protein in VPS15-YMC2
intergenic region
Length = 753
Score = 40.8 bits (94), Expect = 0.013
Identities = 48/188 (25%), Positives = 81/188 (42%), Gaps = 5/188 (2%)
Query: 78 KWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSLNPSLLLSLQS-SITERRQ 136
K+L E + +D+ LA R E A+ L + E + + E S +LL+L S I +RR+
Sbjct: 534 KFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRRE 593
Query: 137 KLADQLAEAACQPSTRGAELRASVSALKKLGDGPHAHSLLLNAHLQRYQYNMQSLRPSNT 196
++ +L+++ S L++ + KLG A L L Q + L+ +
Sbjct: 594 AISSKLSQSILS-SNEIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLI--LQIGSV 650
Query: 197 SYGGAYTAALAQLVFSAVAQAASDSLAIFGEEPA-YSSELVMWATKQTEAFALLVKRHAL 255
Y LA + F + + D IF E A SS LV W + + + L+ + L
Sbjct: 651 DNPTNYLTQLAVIRFQTIKKTVEDFQDIFKELGAKISSILVDWCSDEVDNHFKLIDKQLL 710
Query: 256 ASSAAAGG 263
+ G
Sbjct: 711 NDEMLSPG 718
>KIP3_HUMAN (Q96Q77) Calcium and integrin-binding protein 3 (Kinase
interacting protein 3) (KIP 3)
Length = 187
Score = 38.1 bits (87), Expect = 0.083
Identities = 17/38 (44%), Positives = 27/38 (70%), Gaps = 1/38 (2%)
Query: 477 LVGSVDRLKDSFCRQHALSLIFTEDGDSHLTADMYISM 514
L+GS+ LKD+ RQ ++ +F+EDGD H+T D ++ M
Sbjct: 58 LIGSMPELKDNPFRQR-IAQVFSEDGDGHMTLDNFLDM 94
>RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)
Length = 350
Score = 35.0 bits (79), Expect = 0.70
Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 28/160 (17%)
Query: 92 AERRVEEALAALDEGERVVSEAKEMKSLNPSLLLSLQSSITERRQKLADQLAEAACQPST 151
A R+ + + E V+SE +E+ ++LA+ LAE +P
Sbjct: 147 ASARIMDGSIMVTEDSNVLSEGEEVS------------------EELANVLAELGIEPKE 188
Query: 152 RGAELRASVSALKKLGDGPHAHSLLLNAHLQRYQYNMQSLRPSNTSYGGAYTAALAQLVF 211
G +LR S +G L + Y+ ++QS P+ T+ AQ
Sbjct: 189 VGLDLRGVFS------EGVLFEPDELAIDVDEYRADIQSASPAATNLSVNAVYPTAQTAP 242
Query: 212 SAVAQAASDSLAI--FG--EEPAYSSELVMWATKQTEAFA 247
+ +A+A S++ A+ F E P + EL+ A Q A A
Sbjct: 243 TLIAKATSEAKAVGLFANIESPDFMPELISKADAQLRALA 282
>LPA3_HUMAN (O75145) Liprin-alpha 3 (Protein tyrosine phosphatase
receptor type f polypeptide-interacting protein alpha 3)
(PTPRF-interacting protein alpha 3)
Length = 1194
Score = 34.7 bits (78), Expect = 0.92
Identities = 34/111 (30%), Positives = 49/111 (43%), Gaps = 11/111 (9%)
Query: 67 DSEHKEISD-LDKWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSLNPSLLL 125
D +K +S+ +DK L E + L + L ER + AL+E + E MK L LLL
Sbjct: 424 DDHNKRLSETVDKLLSESNERLQLHLKER-----MGALEEKNSLSEEIANMKKLQDELLL 478
Query: 126 SLQSSIT--ERRQKLADQL---AEAACQPSTRGAELRASVSALKKLGDGPH 171
+ + + ER Q DQL ++ S G+ L S L G H
Sbjct: 479 NKEQLLAEMERMQMEIDQLRGRPPSSYSRSLPGSALELRYSQAPTLPSGAH 529
>IF38_CAEEL (O02328) Probable eukaryotic translation initiation
factor 3 subunit 8 (eIF3 p110) (eIF3c)
Length = 898
Score = 34.7 bits (78), Expect = 0.92
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Query: 17 KEISDLEGELSSIRNLLSTQATLIHGLADGVHIDSLSISDSDGFSVNGALDSEHKEISDL 76
K +D ++++R LL GL V I IS F +N + S+H E
Sbjct: 317 KRTTDRNQHVANLRKLLEVSEEKELGLGINVKISFCIISAL--FELNAKI-SDHMEYETF 373
Query: 77 DKWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSLNPSLLLSLQSSITERRQ 136
L LLD+L+ RV+ ++ +E E + + +E + + S+L+++Q E
Sbjct: 374 MTTLQTVNSLLDLLIGTDRVKLSVTYAEEDENLKDDTQEYR-IQGSILIAVQRLDGE--- 429
Query: 137 KLADQLAEAACQPSTRGAELRA 158
LA L A C + +L+A
Sbjct: 430 -LAKILQNADCHSNDYIEKLKA 450
>GCC2_HUMAN (Q8IWJ2) GRIP and coiled-coil domain-containing protein
2 (Golgi coiled coil protein GCC185) (CTCL tumor antigen
se1-1) (CLL-associated antigen KW-11)
Length = 1583
Score = 34.7 bits (78), Expect = 0.92
Identities = 36/186 (19%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Query: 17 KEISDLEGELSSIRNLLSTQATLIHGLADGVHIDSLSISDSDGFSVNGALDSEHKEISDL 76
KEI +L+ EL ++R+ S + + L +S+ F N + D+ K ++
Sbjct: 28 KEIENLKNELMAVRSKYSEDKANLQKQLEEAMNTQLELSEQLKFQ-NNSEDNVKKLQEEI 86
Query: 77 DKWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSLNPSL----LLSLQSSIT 132
+K F + +L +++++ A DE + V++ + + N + SLQ +
Sbjct: 87 EKIRPGFEE--QILYLQKQLD---ATTDEKKETVTQLQNIIEANSQHYQKNINSLQEELL 141
Query: 133 ERRQKLADQLAEAACQPSTRGAELRASVSALKKLGDGPHAHSLLLNAHLQ-RYQYNMQSL 191
+ + +++ E CQ E A ++ L +L + ++Q +Y+ +++L
Sbjct: 142 QLKAIHQEEVKELMCQIEASAKEHEAEINKLNELKENLVKQCEASEKNIQKKYECELENL 201
Query: 192 RPSNTS 197
R + ++
Sbjct: 202 RKATSN 207
>MYSP_OPIFE (Q9BMQ6) Paramyosin (Fragment)
Length = 638
Score = 34.3 bits (77), Expect = 1.2
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 16/165 (9%)
Query: 4 SVYANYAAFIRTSKEISDLEGELSSIRNLLSTQATLIHGLADGVHIDSLSISD--SDGFS 61
S+ A A R +K +L +L + L+ + +H + +++ + +D
Sbjct: 331 SLSAENAELARRAKAAENLANDLQRRVDELTIEINNLHSQNSQLEAENMRLKSQVNDLVD 390
Query: 62 VNGALDSEHKEIS-----------DLDKWLVEFPDLLDVLLAERRVEEALAALDEGERVV 110
N ALD E++++S D ++ L + L L AER + +AL + E +
Sbjct: 391 KNAALDRENRQLSDQVKDLKSTLRDANRRLTDLEALRSQLEAER--DNLASALHDAEEAL 448
Query: 111 SEAKEMKSLNPSLLLSLQSSITERRQKLADQLAEAACQPSTRGAE 155
E + K N L+ S E+R + D+ E + +TR E
Sbjct: 449 REV-DQKYQNAQAALNHLKSEMEQRLREKDEELETLRKSTTRTIE 492
>MUKB_SALTY (Q935S7) Chromosome partition protein mukB (Structural
maintenance of chromosome related protein)
Length = 1488
Score = 34.3 bits (77), Expect = 1.2
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 48 HID-SLSISDSDGFSVNGALDSEHKEISD-LDKWLVEFPDLLDVLLAERRVEEALAALDE 105
H+D + + + +G G+L+++++ SD L+ + E +EE L+E
Sbjct: 309 HVDMARELGEHNG--AEGSLEADYQAASDHLNLVQTALRQQEKIERYEADLEELQIRLEE 366
Query: 106 GERVVSEAKEMKSLNPSLLLSLQSSITERRQKLADQLAEAACQPSTRGAELRASVSALKK 165
VV+EA EM+ N + + + + E + +LAD +A TR + ++SAL +
Sbjct: 367 QNEVVAEAAEMQDENEARAEAAELEVDELKSQLAD-YQQALDVQQTRAIQYNQAISALAR 425
Query: 166 LGDGPHAHSL 175
+ H L
Sbjct: 426 AKELCHLPDL 435
>YIS1_STRCO (P19780) Insertion element IS110 hypothetical 43.6 kDa
protein
Length = 405
Score = 33.9 bits (76), Expect = 1.6
Identities = 34/118 (28%), Positives = 49/118 (40%), Gaps = 9/118 (7%)
Query: 91 LAERRVEEALAALDEGERVVSEAKEMKSLNPSLLLSLQSSITERRQKLADQLAEAACQP- 149
+A+R +++ ALDE VV + + PSL SL + +RR A A P
Sbjct: 213 MAQRLIDDIFDALDEQTVVVPGTGTLDIVVPSLASSLTAVHEQRRALEAQINALLEAHPL 272
Query: 150 -----STRGAELRASVSALKKLGDGPHAHSLLLNAHLQRYQYNMQSLRPSNTSYGGAY 202
S G +R + L +GDG S AHL Y + + S TS G +
Sbjct: 273 SPVLTSMPGVGVRTAAVLLVTVGDGT---SFPTAAHLASYAGLAPTTKSSGTSIHGEH 327
>CLR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3
precursor (Flamingo homolog 1) (hFmi1) (Multiple
epidermal growth factor-like domains 2) (Epidermal
growth factor-like 1)
Length = 3312
Score = 33.9 bits (76), Expect = 1.6
Identities = 29/91 (31%), Positives = 36/91 (38%), Gaps = 9/91 (9%)
Query: 148 QPSTRGAELRASVSALKKLGDGPHAHSLLLNAHLQRYQYNMQSLRPSNTSYGGAYTAALA 207
+P R L A A K N H Q QYN Q+L P N + G A +A
Sbjct: 290 RPGPRPPGLPARPEARKVTSANRARFRRAANRHPQFPQYNYQTLVPENEAAGTAVLRVVA 349
Query: 208 Q---------LVFSAVAQAASDSLAIFGEEP 229
Q LV+S A S SL +F +P
Sbjct: 350 QDPDAGEAGRLVYSLAALMNSRSLELFSIDP 380
>LVA_DROME (Q8MSS1) Lava lamp protein
Length = 2779
Score = 33.5 bits (75), Expect = 2.0
Identities = 43/178 (24%), Positives = 75/178 (41%), Gaps = 9/178 (5%)
Query: 300 VEQALDANLKRIQESTAAMAAADDWVLTYPPNVNRQTGSTTAFQLKLTSSAHRFNLMVQD 359
+E + A L +QE +AMAA ++ + +N + + KL S+ L ++D
Sbjct: 415 LEATIAAQLLELQEQKSAMAAQNEELAEKTTELNVLNVNLRLLEEKLAQSSRSKPLFLED 474
Query: 360 FFEDVGPLLSMQLGGQALEGLFQVFNSYVNMLIKALPESMEEEESFEDSGNKIVRMAETE 419
ED MQ Q L+ N N+ +K + E++ S + ++A
Sbjct: 475 HSEDSAASKQMQEDLQQLKLKLDETNK-ANIKLKLKCKQAEKKLQKFQSQDGQQQLASLL 533
Query: 420 AQQIALLANASLLADELLPRAAMKLSSLNQDPYKDDNRRRTTERQNRHPEQREWRRRL 477
A L ++L DE + +L+++ +D D ++TE N P Q E R L
Sbjct: 534 ADNEELQQRIAVLEDE---KGQWQLANMQED---DRQPEQSTESNN--PLQLETIRLL 583
>CPS_CLOTM (Q02929) Putative sensory transducer protein
Length = 557
Score = 33.5 bits (75), Expect = 2.0
Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 18/263 (6%)
Query: 15 TSKEISDLEGELSSIRNLLSTQATLIHGLADG-VHIDSLSISDSD--GFSVNGALDSEHK 71
T EI L + + QA ++ +A G + +D SD D G + +D+ ++
Sbjct: 176 TRDEIGKLAESFKRMIENIREQAYVVERIAAGDMTVDVRVKSDKDLLGKKLKEMVDTNNE 235
Query: 72 EISDLDKWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSLNPSL-LLSLQSS 130
+S++++ + V ++V ++ L +G +A ++ L SL ++ Q+
Sbjct: 236 VLSNINEVAAQ------VAAGAKQVSDSSMQLSQG--ATEQASSIEELTASLEQVANQTQ 287
Query: 131 ITERRQKLADQLAEAACQPSTRGAELRASV-SALKKLGDGPHAHSLLLNAHLQ-RYQYNM 188
++ + A++LAE A + +G + A + +A++++ + S ++ + +Q N+
Sbjct: 288 LSAKNANQANELAEVAKNNAEQGNKQMAEMLNAMEEINNSSSNISRIIKVIDEIAFQTNI 347
Query: 189 QSLRPSNTSYGGAYTAALAQLVFSAVAQAASDSLAIFGEEPAYSSELVMWATKQTEAFAL 248
+L + A A F+ VA+ + A ++EL+ K+TE
Sbjct: 348 LALNAAVE----AARAGQHGKGFAVVAEEVRNLAARSANAAKETTELIEGTIKRTENGTK 403
Query: 249 LVKRHALASSAAAGGLRAAAECV 271
+ + A A + G+ AA V
Sbjct: 404 IARETAEALNKIVEGISKAATLV 426
>CLR3_RAT (O88278) Cadherin EGF LAG seven-pass G-type receptor 3
precursor (Multiple epidermal growth factor-like domains
2)
Length = 3313
Score = 33.5 bits (75), Expect = 2.0
Identities = 23/61 (37%), Positives = 29/61 (46%), Gaps = 9/61 (14%)
Query: 178 NAHLQRYQYNMQSLRPSNTSYGGAYTAALAQ---------LVFSAVAQAASDSLAIFGEE 228
N H Q QYN Q+L P N + G A +AQ LV+S A S SL +F +
Sbjct: 311 NRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSID 370
Query: 229 P 229
P
Sbjct: 371 P 371
>GAL1_CLOPE (Q8XKP9) Galactokinase (EC 2.7.1.6) (Galactose kinase)
Length = 387
Score = 33.1 bits (74), Expect = 2.7
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%)
Query: 81 VEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSLNPSLL--LSLQSSITERRQ-- 136
+EF D + ++ + A+ E ERV K +K N L L QS I+ R
Sbjct: 253 LEFETYKDKIEDSNKLRRCVHAISENERVKDAVKALKENNLELFGQLMNQSHISLRDDYE 312
Query: 137 ---KLADQLAEAAC-QPSTRGAELRASVSALKKLGDGPHAHSLLLNAHLQRYQYNMQSLR 192
K D LAE A QP GA + + G G A +++ NAH+ + N+
Sbjct: 313 VTGKELDTLAENAWKQPGVLGARMTGA-------GFGGCAIAIVNNAHVDEFIKNVGQAY 365
Query: 193 PSNTSYGGAYTAA 205
Y ++ A
Sbjct: 366 KDAIGYEASFYVA 378
>SBCC_RHOCA (O68032) Nuclease sbcCD subunit C
Length = 1238
Score = 32.7 bits (73), Expect = 3.5
Identities = 67/260 (25%), Positives = 97/260 (36%), Gaps = 50/260 (19%)
Query: 94 RRVEEALAALDEGERVVSEAKEMKSLNPSLLLSLQSSITERRQKLADQLAEAACQPSTRG 153
RR E LAA + + +A E + + L + R+ LAD A A Q +
Sbjct: 406 RRAEADLAAAETRAQQARQAAEARLAELAAQAPLADDWPQLRRDLADHRAACAAQAAAAT 465
Query: 154 A-------------ELRASV----------SALKK--------LGDGPHAHSLLLNAHLQ 182
A E RA+ SAL K L AH A L
Sbjct: 466 AAQAAQDRAQALAQEARAAAAAEARDQAADSALAKAAAALQQALAPLEAAHPPARTADLA 525
Query: 183 RYQYNMQSLRPSNTSYGGAYTAALAQLVFSAVAQAASDSLAIFGEEPAYSSELVMWATKQ 242
R + ++ L + GA AAL A AA+++ +E A +L A Q
Sbjct: 526 RIETDLAEL--TRALRDGAEAAALGAAAQRAATAAATEAALARAQESAAKQDLDR-AETQ 582
Query: 243 TEAFALLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLLKLFRPSVEQ 302
A +++ LA S AA LRA Q++ G + CPV L P+ +
Sbjct: 583 IAALTAPLEQADLALSDAARSLRA-----QLSAG----------SPCPVCGALEHPTPAE 627
Query: 303 ALDANL-KRIQESTAAMAAA 321
A A+L +R++ AA A
Sbjct: 628 AGLAHLAERLRADQAAARGA 647
>MUKB_YERPE (Q8ZG99) Chromosome partition protein mukB (Structural
maintenance of chromosome related protein)
Length = 1485
Score = 32.7 bits (73), Expect = 3.5
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 13 IRTSKEISDLEGELSSIRNLLSTQATLIHGLADGVHIDSLSISDSDGFSVNGALDSE--- 69
IR ++ DL L S + H +H+DS + D FS L +E
Sbjct: 249 IRVTQSDRDLFKHLISEATSYVAADYMRHANERRIHLDSALVLRRDLFSSRKQLVTEQYR 308
Query: 70 HKEIS-----------DLDKWLVEFPDLLDVLLAERR-----------VEEALAALDEGE 107
H E+S DL+ D L+++ R +EE L+E
Sbjct: 309 HVEMSRELAEQSGAESDLETDYQAASDHLNLVQTAMRQQEKIERYQSDLEELTYRLEEQS 368
Query: 108 RVVSEAKEMKSLNPSLLLSLQSSITERRQKLADQLAEAACQPSTRGAELRASVSALKK 165
VVSEA E ++ N + + + + E + +LAD +A TR + + ++ AL++
Sbjct: 369 EVVSEASEQQADNEARAEAAELEVDELKSQLAD-YQQALDVQQTRAIQYQQALQALER 425
>MUKB_SALTI (Q8Z7Z5) Chromosome partition protein mukB (Structural
maintenance of chromosome related protein)
Length = 1488
Score = 32.7 bits (73), Expect = 3.5
Identities = 31/130 (23%), Positives = 60/130 (45%), Gaps = 5/130 (3%)
Query: 48 HID-SLSISDSDGFSVNGALDSEHKEISD-LDKWLVEFPDLLDVLLAERRVEEALAALDE 105
H+D + + + +G G+L+++++ SD L+ + E +EE +E
Sbjct: 309 HVDMARELGEHNG--AEGSLEADYQAASDHLNLVQTALRQQEKIERYEADLEELQIRFEE 366
Query: 106 GERVVSEAKEMKSLNPSLLLSLQSSITERRQKLADQLAEAACQPSTRGAELRASVSALKK 165
VV+EA EM+ N + + + + E + +LAD +A TR + ++SAL +
Sbjct: 367 QNEVVAEAAEMQDENEARAEAAELEVDELKSQLAD-YQQALDVQQTRAIQYNQAISALAR 425
Query: 166 LGDGPHAHSL 175
+ H L
Sbjct: 426 AKELCHLPDL 435
>LPA3_RAT (Q91Z79) Liprin-alpha 3 (Protein tyrosine phosphatase
receptor type f polypeptide-interacting protein alpha 3)
(PTPRF-interacting protein alpha 3)
Length = 1192
Score = 32.7 bits (73), Expect = 3.5
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 67 DSEHKEISD-LDKWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSLNPSLLL 125
D +K +S+ +DK L E + L + L ER + AL+E + E MK L LLL
Sbjct: 424 DDHNKRLSETVDKLLSESNERLQLHLKER-----MGALEEKNSLSEEIANMKKLQDELLL 478
Query: 126 SLQSSIT--ERRQKLADQL 142
+ + + ER Q DQL
Sbjct: 479 NKEQLLAEMERMQMEIDQL 497
>LPA3_MOUSE (P60469) Liprin-alpha 3 (Protein tyrosine phosphatase
receptor type f polypeptide-interacting protein alpha 3)
(PTPRF-interacting protein alpha 3)
Length = 1043
Score = 32.7 bits (73), Expect = 3.5
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 67 DSEHKEISD-LDKWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSLNPSLLL 125
D +K +S+ +DK L E + L + L ER + AL+E + E MK L LLL
Sbjct: 273 DDHNKRLSETVDKLLSESNERLQLHLKER-----MGALEEKNSLSEEIANMKKLQDELLL 327
Query: 126 SLQSSIT--ERRQKLADQL 142
+ + + ER Q DQL
Sbjct: 328 NKEQLLAEMERMQMEIDQL 346
>HUTI_DEIRA (Q9RZ05) Imidazolonepropionase (EC 3.5.2.7)
(Imidazolone-5-propionate hydrolase)
Length = 399
Score = 32.3 bits (72), Expect = 4.6
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 207 AQLVFSAVAQAASDSLAIFGEEPAYSSELVMWATKQTEAFALLVKRHALASSAAAGGLRA 266
A+L+ + +++L +F E+ A+S E +A L VK HA A GG
Sbjct: 192 AELIPQVAREGLAEALDVFCEKEAFSVEETRTMFAAAQAHGLRVKLHA-DQFHAIGGTEL 250
Query: 267 AAECVQIALGHCSLLEARGLA 287
A E +++ H LEA G A
Sbjct: 251 ACEVGALSVDH---LEASGAA 268
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.132 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,542,034
Number of Sequences: 164201
Number of extensions: 3024211
Number of successful extensions: 9821
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 9807
Number of HSP's gapped (non-prelim): 44
length of query: 729
length of database: 59,974,054
effective HSP length: 118
effective length of query: 611
effective length of database: 40,598,336
effective search space: 24805583296
effective search space used: 24805583296
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Medicago: description of AC144503.8