BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144477.14 + phase: 1 /pseudo
(190 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP51_PIG (O46420) Cytochrome P450 51A1 (EC 1.14.13.70) (CYPLI) (... 31 2.0
CP51_HUMAN (Q16850) Cytochrome P450 51A1 (EC 1.14.13.70) (CYPLI)... 31 2.0
MY1C_HUMAN (O00159) Myosin Ic (Myosin I beta) (MMI-beta) (MMIb) 30 4.4
RPOB_PHYPA (P60283) DNA-directed RNA polymerase beta chain (EC 2... 29 5.7
PYRD_HELPY (O25655) Dihydroorotate dehydrogenase (EC 1.3.3.1) (D... 29 7.5
CP51_RAT (Q64654) Cytochrome P450 51A1 (EC 1.14.13.70) (CYPLI) (... 29 7.5
PYRB_BACHD (Q9K9V6) Aspartate carbamoyltransferase (EC 2.1.3.2) ... 28 9.8
GALE_SALTY (P22715) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 28 9.8
GALE_SALTI (Q56093) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 28 9.8
>CP51_PIG (O46420) Cytochrome P450 51A1 (EC 1.14.13.70) (CYPLI)
(P450LI) (Sterol 14-alpha demethylase) (Lanosterol
14-alpha demethylase) (LDM) (P450-14DM)
Length = 503
Score = 30.8 bits (68), Expect = 2.0
Identities = 18/46 (39%), Positives = 23/46 (49%), Gaps = 7/46 (15%)
Query: 101 DHITEKILDPTYLDG-------VAGTFSSLKNVLQRSSTTAKAWVG 139
D I + +LD TY DG VAG L Q +S+T AW+G
Sbjct: 279 DDILQTLLDSTYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMG 324
>CP51_HUMAN (Q16850) Cytochrome P450 51A1 (EC 1.14.13.70) (CYPLI)
(P450LI) (Sterol 14-alpha demethylase) (Lanosterol
14-alpha demethylase) (LDM) (P450-14DM) (P45014DM)
Length = 503
Score = 30.8 bits (68), Expect = 2.0
Identities = 18/46 (39%), Positives = 23/46 (49%), Gaps = 7/46 (15%)
Query: 101 DHITEKILDPTYLDG-------VAGTFSSLKNVLQRSSTTAKAWVG 139
D I + +LD TY DG VAG L Q +S+T AW+G
Sbjct: 279 DDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMG 324
>MY1C_HUMAN (O00159) Myosin Ic (Myosin I beta) (MMI-beta) (MMIb)
Length = 1028
Score = 29.6 bits (65), Expect = 4.4
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 30 GISISPYQYANDATILRNIVQEVYREVVQ--KPLIIAPGGFFDANWFKKFLNRSEKLADV 87
GI+ P QY N+ I+ ++V+E ++ ++ + PG D + EKL D
Sbjct: 430 GIAWEPVQYFNNK-IICDLVEEKFKGIISILDEECLRPGEATDLTFL-------EKLEDT 481
Query: 88 VTHHIYNLGPGVDDHITEKIL 108
V HH + L + D T K L
Sbjct: 482 VKHHPHFLTHKLADQRTRKSL 502
>RPOB_PHYPA (P60283) DNA-directed RNA polymerase beta chain (EC
2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta
subunit) (RNA polymerase beta subunit)
Length = 1085
Score = 29.3 bits (64), Expect = 5.7
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 56 VVQKPLIIAPGGFFDANWFKKFLNRSEKLADVV-THHIYNLGPG 98
+ Q PLI FF ++ +FL+++ LA++V + +LGPG
Sbjct: 370 ITQTPLIATFKEFFGSHPLSQFLDQTNSLAEIVHKRRLSSLGPG 413
>PYRD_HELPY (O25655) Dihydroorotate dehydrogenase (EC 1.3.3.1)
(Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD)
Length = 351
Score = 28.9 bits (63), Expect = 7.5
Identities = 20/82 (24%), Positives = 38/82 (45%), Gaps = 5/82 (6%)
Query: 46 RNIVQEVYREVVQKPLIIAPGGFFDANWFKKFLNRSEKLADVVTHHIYNLGPGVDDHITE 105
R I +E+ + K ++++ GG DA + + L + + IYN GP + +I +
Sbjct: 270 REIFKELAKAFFNKSVLVSVGGISDAKEAYERIKMGASLLQIYSAFIYN-GPNLCQNILK 328
Query: 106 KILDPTYLDGVAGTFSSLKNVL 127
++ DG F S+K +
Sbjct: 329 DLVKLLQKDG----FLSVKEAI 346
>CP51_RAT (Q64654) Cytochrome P450 51A1 (EC 1.14.13.70) (CYPLI)
(P450LI) (Sterol 14-alpha demethylase) (Lanosterol
14-alpha demethylase) (LDM) (P450-14DM)
Length = 503
Score = 28.9 bits (63), Expect = 7.5
Identities = 16/46 (34%), Positives = 23/46 (49%), Gaps = 7/46 (15%)
Query: 101 DHITEKILDPTYLDG-------VAGTFSSLKNVLQRSSTTAKAWVG 139
+ I + +LD TY DG +AG L Q +S+T AW+G
Sbjct: 279 EDILQTLLDSTYKDGRPLTDDEIAGMLIGLLLAGQHTSSTTSAWMG 324
>PYRB_BACHD (Q9K9V6) Aspartate carbamoyltransferase (EC 2.1.3.2)
(Aspartate transcarbamylase) (ATCase)
Length = 305
Score = 28.5 bits (62), Expect = 9.8
Identities = 16/46 (34%), Positives = 23/46 (49%)
Query: 82 EKLADVVTHHIYNLGPGVDDHITEKILDPTYLDGVAGTFSSLKNVL 127
E+L D + I N G G H T+ +LD + G FS+L V+
Sbjct: 118 EELKDRINIPIINAGDGCGHHPTQSLLDLWTIQQEFGRFSNLITVI 163
>GALE_SALTY (P22715) UDP-glucose 4-epimerase (EC 5.1.3.2)
(Galactowaldenase) (UDP-galactose 4-epimerase)
Length = 338
Score = 28.5 bits (62), Expect = 9.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 82 EKLADVVTHHIYNLGPGVDDHITEKI 107
EKLAD HIYNLG GV + + +
Sbjct: 248 EKLADKSGVHIYNLGAGVGSSVLDVV 273
>GALE_SALTI (Q56093) UDP-glucose 4-epimerase (EC 5.1.3.2)
(Galactowaldenase) (UDP-galactose 4-epimerase)
Length = 338
Score = 28.5 bits (62), Expect = 9.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 82 EKLADVVTHHIYNLGPGVDDHITEKI 107
EKLAD HIYNLG GV + + +
Sbjct: 248 EKLADKSGVHIYNLGAGVGSSVLDVV 273
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.320 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,829,102
Number of Sequences: 164201
Number of extensions: 971245
Number of successful extensions: 2184
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2179
Number of HSP's gapped (non-prelim): 9
length of query: 190
length of database: 59,974,054
effective HSP length: 104
effective length of query: 86
effective length of database: 42,897,150
effective search space: 3689154900
effective search space used: 3689154900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC144477.14