BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144459.6 - phase: 0
(1105 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IGA2_HAEIN (P45384) Immunoglobulin A1 protease precursor (EC 3.4... 44 0.002
FTSY_ECOLI (P10121) Cell division protein ftsY 44 0.002
NBEA_DROME (Q9W4E2) Neurobeachin protein (Rugose protein) (A-kin... 43 0.004
UN89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoo... 42 0.007
NFM_RABIT (P54938) Neurofilament triplet M protein (160 kDa neur... 42 0.007
IGA0_HAEIN (P44969) Immunoglobulin A1 protease precursor (EC 3.4... 42 0.007
IF2_BORBR (Q7WHG2) Translation initiation factor IF-2 42 0.007
TRA6_STAAU (P19775) Transposase for insertion sequence element I... 41 0.016
TRA6_ENTFA (P59787) Transposase for insertion sequence element I... 41 0.016
PAN1_YEAST (P32521) PAN1 protein 41 0.020
SEPL_HUMAN (Q14242) P-selectin glycoprotein ligand 1 precursor (... 40 0.035
RNFC_SALTY (Q8ZPM2) Electron transport complex protein rnfC 40 0.035
IGA4_HAEIN (P45386) Immunoglobulin A1 protease precursor (EC 3.4... 40 0.035
SEPL_MOUSE (Q62170) P-selectin glycoprotein ligand 1 precursor (... 39 0.059
E15R_MOUSE (Q60902) Epidermal growth factor receptor substrate 1... 39 0.059
NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neur... 39 0.077
DAMX_ECO57 (Q8X826) DamX protein 39 0.077
MAPB_RAT (P15205) Microtubule-associated protein 1B (MAP 1B) (Ne... 39 0.10
IF2C_EUGGR (Q9XEK9) Translation initiation factor IF-2, chloropl... 39 0.10
HMW1_MYCPN (Q50365) Cytadherence high molecular weight protein 1... 39 0.10
>IGA2_HAEIN (P45384) Immunoglobulin A1 protease precursor (EC
3.4.21.72) (IGA1 protease)
Length = 1702
Score = 44.3 bits (103), Expect = 0.002
Identities = 53/283 (18%), Positives = 106/283 (36%), Gaps = 28/283 (9%)
Query: 827 KSDVQNPEAAK-RKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEA-------- 877
K+ V+ E AK K + ++ T P Q P EV+ T+ + +V+A
Sbjct: 1116 KAKVEKEEKAKVEKDEIQEAPQMASETSPKQAKPAPKEVSTDTKVEETQVQAQPQTQSTT 1175
Query: 878 -----GTEPMQTEPIQTDPMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQD 932
T P +T P + A P+ ++ + QP T + T TQ+
Sbjct: 1176 VAAAEATSPNSKPAEETQPSEKTNAEPVTPVVSKNQTENTTDQPTEREKTAKVETEKTQE 1235
Query: 933 PPRHTTKIVKVKNSEAPFKIQKVVTSEAANALPEKIVTEFYEALPESQLETSLG---PDV 989
PP+ ++ + + Q V+ SE +P E +A ++Q ++ P
Sbjct: 1236 PPQVASQASPKQEQSETVQPQAVLESE---NVPTVNNAEEVQAQLQTQTSATVSTKQPAP 1292
Query: 990 FDDLDDSVLAAITDQMFEAAEKEFNVVNVVKSRNEQKKKTL--------GLKKSVKAGRK 1041
+ ++ AIT+ ++ + + + ++ K T+ K+ R+
Sbjct: 1293 ENSINTGSATAITETAEKSDKPQTETAASTEDASQHKANTVADNSVANNSESSEPKSRRR 1352
Query: 1042 SSRLMKLKTKAIKGAGSSMDQPMVLDESEEGTLTQEDHGLIKS 1084
S +T A + +S D+ + D S+ + ++S
Sbjct: 1353 RSISQPQETSAEETTAASTDETTIADNSKRSKPNRRSRRSVRS 1395
>FTSY_ECOLI (P10121) Cell division protein ftsY
Length = 497
Score = 43.9 bits (102), Expect = 0.002
Identities = 57/222 (25%), Positives = 96/222 (42%), Gaps = 27/222 (12%)
Query: 838 RKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEPIQTDPMQAEVA 897
+K +TP ++ TE P+ E+ A EP++A +A ++ +P +AE
Sbjct: 17 QKEQTPEKE-----TEVQNEQPVVEEIVQAQEPVKASEQA----VEEQPQAHTEAEAETF 67
Query: 898 AGTKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPRHTTKIVKVKNSEAPFKIQKVVT 957
A E A +E QPE E QP + T + V ++ E P + + V
Sbjct: 68 AADVVEVTEQVAESEKAQPEAEVVAQP------EPVVEETPEPVAIEREELP--LPEDVN 119
Query: 958 SEAANALPEKIVTEFYEALPESQLETSLGPDVFDDLDDSVLAAITDQMFEAAEKEFNVVN 1017
+EA + + E E + E+ E + ++ D+ ++ LAA EAAE+ VV
Sbjct: 120 AEAVSPEEWQAEAETVE-IVEAAEEEAAKEEITDEELETALAA------EAAEEAVMVVP 172
Query: 1018 VVKSRNEQKKKTLGLKKSVKAGRKSSRLMK--LKTKAIKGAG 1057
+ ++ +K K G +RL + LKTK G+G
Sbjct: 173 PAEEEQPVEEIAQEQEKPTKEG-FFARLKRSLLKTKENLGSG 213
>NBEA_DROME (Q9W4E2) Neurobeachin protein (Rugose protein) (A-kinase
anchor protein 550) (AKAP 550) (dAKAP550)
Length = 3584
Score = 43.1 bits (100), Expect = 0.004
Identities = 47/189 (24%), Positives = 79/189 (40%), Gaps = 33/189 (17%)
Query: 827 KSDVQNPEAAKRKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEP 886
K++ N E K++++T + EP + + AAA E +Q VEA +Q E
Sbjct: 1409 KTETNNNEIPKKEKQT--------SEEPEDVETAETLAAAAKEIVQEVVEAALVMVQEES 1460
Query: 887 IQTDPMQAEVAAGTKPMQAEVEAGTEPMQPEVE---AGTQPMHT------ASTQDPPRHT 937
Q P + G + + E G E + ++E A T+ T +DP H+
Sbjct: 1461 TQEKPEK-----GANSEEEKNEIGKEEILLQLEEKPASTEVQETKIEGDLKKPEDPKGHS 1515
Query: 938 TKIVKVKNSE--APFKIQKVVTSEAANALPEKIVTEFYEALPESQLETSLGPDVFDDLDD 995
+ K N E P + ++ + E A LP+K PE Q+ + + +DD
Sbjct: 1516 SVEPKTPNLEEPKPQETEQQKSQEVAEELPQK---------PEEQVVAIVNQVLDTLVDD 1566
Query: 996 SVLAAITDQ 1004
+V A +Q
Sbjct: 1567 TVKAVAAEQ 1575
>UN89_CAEEL (O01761) Muscle M-line assembly protein unc-89
(Uncoordinated protein 89)
Length = 6632
Score = 42.4 bits (98), Expect = 0.007
Identities = 50/235 (21%), Positives = 87/235 (36%), Gaps = 11/235 (4%)
Query: 831 QNPEAAKRKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEPIQTD 890
++PE + K +P +K P + P + P EV++ T+ + P
Sbjct: 1384 KSPEKTEEKPASPTKKTGEEVKSPKEKSPA-SPTKKEKSPAAEEVKSPTKK-EKSPSSPT 1441
Query: 891 PMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPRH-----TTKIVKVKN 945
+ ++ TK EV+ + P P + P + P + T IV+V +
Sbjct: 1442 KKEKSPSSPTKKTGDEVKEKSPPKSP-TKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSS 1500
Query: 946 SEAPFKIQKVVTSEAANALPEKIVTEFYEALPESQLETSLGPDVFDDLDDSVLAAITDQM 1005
K + +T+E + E + E PE E P D S +IT+++
Sbjct: 1501 ETTIEKTETTMTTEMTHESEESRTSVKKEKTPEKVDEKPKSPT---KKDKSPEKSITEEI 1557
Query: 1006 FEAAEKEFNVVNVVKSRNEQKKKTLGLKKSVKAGRKSSRLMKLKTKAIKGAGSSM 1060
+KE + V + KK +K +KS +K TK K S+
Sbjct: 1558 KSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSV 1612
Score = 37.7 bits (86), Expect = 0.17
Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 30/248 (12%)
Query: 831 QNPEAAKRKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEPIQTD 890
++PE A K K+P +K S E T+ +++ P + E E T P + E T
Sbjct: 1622 KSPEKADDKPKSPTKKEKS--PEKSATEDVKSPTKKEKSPEKVE-EKPTSPTKKESSPTK 1678
Query: 891 PMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPRHTTKIVKVKNSEAPF 950
EV + TK ++ +P P T + P + + VK ++P
Sbjct: 1679 KTDDEVKSPTKKEKSPQTVEEKPASP----------TKKEKSPEKSVVEEVKSPKEKSPE 1728
Query: 951 KI-QKVVTSEAANALPEKIVTEFY------EALPESQLETSLGPDVFDDLDDSVLAAITD 1003
K +K + PEK E E PE E P + S + D
Sbjct: 1729 KAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEK--PKSPTKKESSPVKMADD 1786
Query: 1004 QMFEAAEKEFNVVNVVKSRNEQKKKTLGLKKSVKAGRKSSRLMKLKTKAIKGAGSSMDQP 1063
++ +KE KS + ++K K K KS+ +LK+ K S
Sbjct: 1787 EVKSPTKKE-------KSPEKVEEKPASPTKKEKTPEKSA-AEELKSPTKKEKSPSSPTK 1838
Query: 1064 MVLDESEE 1071
DES+E
Sbjct: 1839 KTGDESKE 1846
>NFM_RABIT (P54938) Neurofilament triplet M protein (160 kDa
neurofilament protein) (Neurofilament medium polypeptide)
(NF-M) (Fragment)
Length = 644
Score = 42.4 bits (98), Expect = 0.007
Identities = 55/238 (23%), Positives = 87/238 (36%), Gaps = 12/238 (5%)
Query: 823 QRRCKSDVQNPEAAKRKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTEPM 882
++ + +V + + K TP K E + + E + QAE E G+E
Sbjct: 285 EQEAEEEVAAAKKSPVKATTPEIKEEEGEKEEEGQEEEEEEEDEGVKSDQAE-EGGSEKE 343
Query: 883 QTEPIQTDPMQAEVAAGTKPMQAEV--EAGTEPMQPEVEAGTQPMHTASTQDPPRHTTKI 940
+ + + + E A + +AE E TE EV A +P+ A P + + +
Sbjct: 344 GSSKNEGEQEEGETEAEGEVEEAEAKEEKKTEEKSEEVAAKEEPVTEAKVGKPEKAKSPV 403
Query: 941 VKVKNSEAPFKIQKVVTSEAANALPEKIVTEFYEALPESQLETSLGPDVFDDLDDSVLAA 1000
K E K + EK+ E +A ES E + D A
Sbjct: 404 PKSPVEEVKPKAEATAGKGEQKEEEEKVEEEKKKAAKESPKEEKVEKKEEKPKDVPKKKA 463
Query: 1001 ITDQMFEAAEKEFNVVNVVKSRNEQKKKTLGLKKSVKAGRKSSRLMKLKTKAIKGAGS 1058
+ EAAE+ + K +GL+K K G K + K K KA + GS
Sbjct: 464 ESPVKEEAAEEAATITKPTK---------VGLEKETKEGEKPLQQEKEKEKAGEEGGS 512
>IGA0_HAEIN (P44969) Immunoglobulin A1 protease precursor (EC
3.4.21.72) (IGA1 protease)
Length = 1694
Score = 42.4 bits (98), Expect = 0.007
Identities = 52/280 (18%), Positives = 104/280 (36%), Gaps = 28/280 (10%)
Query: 830 VQNPEAAK-RKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEA----------- 877
V+ E AK K + ++ T P Q P EV+ T+ + +V+A
Sbjct: 1111 VEKEEKAKVEKDEIQEAPQMASETSPKQAKPAPKEVSTDTKVEETQVQAQPQTQSTTVAA 1170
Query: 878 --GTEPMQTEPIQTDPMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPR 935
T P +T P + A P+ ++ + QP T + T TQ+PP+
Sbjct: 1171 AEATSPNSKPAEETQPSEKTNAEPVTPVVSKNQTENTTDQPTEREKTAKVETEKTQEPPQ 1230
Query: 936 HTTKIVKVKNSEAPFKIQKVVTSEAANALPEKIVTEFYEALPESQLETSLG---PDVFDD 992
++ + + Q V+ SE +P E +A ++Q ++ P +
Sbjct: 1231 VASQASPKQEQSETVQPQAVLESE---NVPTVNNAEEVQAQLQTQTSATVSTKQPAPENS 1287
Query: 993 LDDSVLAAITDQMFEAAEKEFNVVNVVKSRNEQKKKTL--------GLKKSVKAGRKSSR 1044
++ AIT+ ++ + + + ++ K T+ K+ R+ S
Sbjct: 1288 INTGSATAITETAEKSDKPQTETAASTEDASQHKANTVADNSVANNSESSDPKSRRRRSI 1347
Query: 1045 LMKLKTKAIKGAGSSMDQPMVLDESEEGTLTQEDHGLIKS 1084
+T A + +S D+ + D S+ + ++S
Sbjct: 1348 SQPQETSAEETTAASTDETTIADNSKRSKPNRRSRRSVRS 1387
>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2
Length = 997
Score = 42.4 bits (98), Expect = 0.007
Identities = 43/163 (26%), Positives = 60/163 (36%), Gaps = 18/163 (11%)
Query: 824 RRCKSDVQNPEAAKRKRKTP---RRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTE 880
RR S+++ +A R R R+K +P + QA A A E V A
Sbjct: 66 RRQTSEIRQADATGRSRTIQVEVRKKRVFVKRDPAELAAEQA-AARAEEAAAEAVPAEAA 124
Query: 881 PMQTEPIQTDPMQAEVAAGTKPMQAEVEA------GTEPMQPE-VEAGTQPMHTASTQ-- 931
P EP++ +P A +P AE A EP + +A QP T + Q
Sbjct: 125 PAPAEPVRAEPAVETAAKPVEPPVAEAPAEPVAAPAAEPQSEQPAQAEAQPEPTPAAQAE 184
Query: 932 -----DPPRHTTKIVKVKNSEAPFKIQKVVTSEAANALPEKIV 969
+P V P K V +EA A PE +V
Sbjct: 185 PEPQPEPQPEAAPAQAVAEPVEPAKNVSVTETEAEQARPEPVV 227
>TRA6_STAAU (P19775) Transposase for insertion sequence element
IS256 in transposon Tn4001
Length = 390
Score = 41.2 bits (95), Expect = 0.016
Identities = 33/127 (25%), Positives = 56/127 (43%), Gaps = 12/127 (9%)
Query: 453 PFVGVDGCHLKTRYGGQLL-----IAVGRDPNDQYFPLAFGVVETECKESWKWFIQLLME 507
P++ D ++K R ++L IA+G + + F + E +E+W F + L E
Sbjct: 162 PYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKE 221
Query: 508 DIGQDKRYVFISDQQKGLLSVFDEMFDTIDHRLC----LRHLYANFKKKFGGGSQIRDLM 563
G + ISD KGL+S + F + + C LR+++ KK R+ +
Sbjct: 222 R-GLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKK--NSKSFREAV 278
Query: 564 MGAAKAT 570
G K T
Sbjct: 279 KGIFKFT 285
>TRA6_ENTFA (P59787) Transposase for insertion sequence element
IS256 in transposon Tn4001
Length = 390
Score = 41.2 bits (95), Expect = 0.016
Identities = 33/127 (25%), Positives = 56/127 (43%), Gaps = 12/127 (9%)
Query: 453 PFVGVDGCHLKTRYGGQLL-----IAVGRDPNDQYFPLAFGVVETECKESWKWFIQLLME 507
P++ D ++K R ++L IA+G + + F + E +E+W F + L E
Sbjct: 162 PYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKE 221
Query: 508 DIGQDKRYVFISDQQKGLLSVFDEMFDTIDHRLC----LRHLYANFKKKFGGGSQIRDLM 563
G + ISD KGL+S + F + + C LR+++ KK R+ +
Sbjct: 222 R-GLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKK--NSKSFREAV 278
Query: 564 MGAAKAT 570
G K T
Sbjct: 279 KGIFKFT 285
>PAN1_YEAST (P32521) PAN1 protein
Length = 1480
Score = 40.8 bits (94), Expect = 0.020
Identities = 51/225 (22%), Positives = 91/225 (39%), Gaps = 32/225 (14%)
Query: 775 PELLPPNYKNGPGRPRKLRIREFDENGSRMRRQGVAYRCTKCDQFGHNQRRCKSDVQNPE 834
P P + P + + +E + ++ Q K +F N+R ++
Sbjct: 990 PSSTPTPVDDRSSSPSYSQFKTAEERAAYLKEQAKKRMKEKLAKFDKNRRNVTQSSRSIS 1049
Query: 835 AAKRKRKTPRRKNTSTATEPMQT---DPMQAEVAAATEPMQAEVEAGTEPMQ-TEPIQ-T 889
+ + + + +S EP T + EVA T+P+Q+ T+P+Q T+P+Q T
Sbjct: 1050 SENSREQPQQIAGSSNLVEPRATPFQEEKYVEVAQPTQPVQS-----TQPVQPTQPVQPT 1104
Query: 890 DPMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGTQPM----HTASTQDPPRHTTKIVKVKN 945
P+Q T+P+Q T+P+QP TQP+ + D + +++
Sbjct: 1105 QPVQP-----TQPVQP-----TQPVQP-----TQPVQNVYNAKQESDDEDEDDEEKRLQE 1149
Query: 946 SEAPFKIQKVVTSEAANALPEKIVTEFYEALPESQLETSLGPDVF 990
K++K E A K + +A ES E + G D F
Sbjct: 1150 ELKRLKLKKKADKEKRLAALRK---QIEDAQNESDEEETNGKDNF 1191
>SEPL_HUMAN (Q14242) P-selectin glycoprotein ligand 1 precursor
(PSGL-1) (Selectin P ligand) (CD162 antigen)
Length = 412
Score = 40.0 bits (92), Expect = 0.035
Identities = 44/188 (23%), Positives = 65/188 (34%), Gaps = 14/188 (7%)
Query: 767 DMWPEVEAPELLPPNYKN----GPGRPRKLRIREFDENGSRMRRQG-VAYRCTKCDQFGH 821
D PE E PE+L + GPG P + + + G V T+ G+
Sbjct: 52 DFLPETEPPEMLRNSTDTTPLTGPGTPESTTVEPAARRSTGLDAGGAVTELTTELANMGN 111
Query: 822 -NQRRCKSDVQNPEAAKRKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTE 880
+ ++Q + A + +T + T T P+ Q ATE A T
Sbjct: 112 LSTDSAAMEIQTTQPAATEAQTTQPVPTEAQTTPLAATEAQTTRLTATE-------AQTT 164
Query: 881 PMQTEPIQTDPMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPRHTTKI 940
P+ QT P A A T+P E + T P E + A T P +
Sbjct: 165 PLAATEAQTTPPAATEAQTTQPTGLEAQT-TAPAAMEAQTTAPAAMEAQTTPPAAMEAQT 223
Query: 941 VKVKNSEA 948
+ EA
Sbjct: 224 TQTTAMEA 231
Score = 32.7 bits (73), Expect = 5.5
Identities = 40/137 (29%), Positives = 54/137 (39%), Gaps = 24/137 (17%)
Query: 833 PEAAKRKRKTPRRKNTSTATEPM----QTDPMQAEVAAATEPMQAEVEAGTEP---MQTE 885
P AA + TP + T+P QT A A T P A +EA T P M+ +
Sbjct: 165 PLAATEAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTTAP--AAMEAQTTPPAAMEAQ 222
Query: 886 PIQTDPMQAEVAAG-------TKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPRHTT 938
QT M+A+ A T+P EA T P+ T+P T + P TT
Sbjct: 223 TTQTTAMEAQTTAPEATEAQTTQP--TATEAQTTPLAAMEALSTEPSATEALSMEP--TT 278
Query: 939 KIVKVKNSEAPFKIQKV 955
K + PF + V
Sbjct: 279 K----RGLFIPFSVSSV 291
>RNFC_SALTY (Q8ZPM2) Electron transport complex protein rnfC
Length = 735
Score = 40.0 bits (92), Expect = 0.035
Identities = 34/90 (37%), Positives = 48/90 (52%), Gaps = 12/90 (13%)
Query: 834 EAAKRKRKTPRRKNTSTATEPMQT-DPMQAEVAAATEPMQA---EVEAGTEPMQTEPIQT 889
EAA + K R++ T +EP + DP +A V AA +A E + G+EP EPI
Sbjct: 622 EAAIARAKA-RKQEQQTGSEPAEAVDPRKAAVEAAIARAKARKQEQQTGSEP--AEPI-- 676
Query: 890 DPMQAEVAAG---TKPMQAEVEAGTEPMQP 916
DP +A V A K + E +AG+EP +P
Sbjct: 677 DPRKAAVEAAIARAKARKQEQQAGSEPAEP 706
>IGA4_HAEIN (P45386) Immunoglobulin A1 protease precursor (EC
3.4.21.72) (IGA1 protease)
Length = 1849
Score = 40.0 bits (92), Expect = 0.035
Identities = 41/165 (24%), Positives = 70/165 (41%), Gaps = 13/165 (7%)
Query: 830 VQNPEAAKRKRKTPRRKNTSTATEP-MQTDPMQAEVAAATEPMQAEVEAGTEPMQTEPIQ 888
V+ E AK + + ++ T+ EP Q +P EV T +A+ T+P +
Sbjct: 1191 VEKEEKAKVETEETQKAPQVTSKEPPKQAEPAPEEVPTDTNAEEAQALQQTQPTTVAAAE 1250
Query: 889 TDPMQAEVAAGTKPMQAEVEAGTEPMQPEV--EAGTQPMHTASTQDPPRH-TTKIVKVKN 945
T ++ A T+ Q + EP+ P V TQP T T + T ++ +V +
Sbjct: 1251 TTSPNSKPAEETQ--QPSEKTNAEPVTPVVSENTATQPTETEETAKVEKEKTQEVPQVAS 1308
Query: 946 SEAPFKIQKVVTSEA-----ANALPEKIVT--EFYEALPESQLET 983
E+P + Q +A A E ++T E P++Q +T
Sbjct: 1309 QESPKQEQPAAKPQAQTKPQAEPARENVLTTKNVGEPQPQAQPQT 1353
Score = 33.1 bits (74), Expect = 4.2
Identities = 41/168 (24%), Positives = 58/168 (34%), Gaps = 12/168 (7%)
Query: 827 KSDVQNPEAAKRKRKTPRRKNTSTATEPMQTDPMQAE-VAAATEPMQAEVEAGTEPMQTE 885
KSD P A P Q + A+ ATEP E E T
Sbjct: 1079 KSDTATQTENPNSESVPSETTEKVAENPPQENETVAKNEQEATEPTPQNGEVAKEDQPTV 1138
Query: 886 PIQTDPMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGTQPMHTA--STQD----PPRHTTK 939
T +A + G E +EP + + QP T ST+D K
Sbjct: 1139 EANTQTNEATQSEGKTEETQTAETKSEPTESVTVSENQPEKTVSQSTEDKVVVEKEEKAK 1198
Query: 940 IVKVKNSEAPFKIQKVVTSEAANALPEKIVT----EFYEALPESQLET 983
+ + +AP K +A A PE++ T E +AL ++Q T
Sbjct: 1199 VETEETQKAPQVTSKEPPKQAEPA-PEEVPTDTNAEEAQALQQTQPTT 1245
Score = 33.1 bits (74), Expect = 4.2
Identities = 38/158 (24%), Positives = 60/158 (37%), Gaps = 36/158 (22%)
Query: 833 PEAAKRKRKTPRRKNTSTATEPMQTDPM-QAEVAAATEPMQAEVEAGTEPM-----QTEP 886
P+A + + P R+N T + P Q + + P E A ++P Q +P
Sbjct: 1321 PQAQTKPQAEPARENVLTTKNVGEPQPQAQPQTQSTAVPTTGETAANSKPAAKPQAQAKP 1380
Query: 887 IQTDPMQAEVAA-GTKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPRHTTKIVKVKN 945
QT+P + V+ TK Q++ A T ST+ P + T+ N
Sbjct: 1381 -QTEPARENVSTVNTKEPQSQTSA-----------------TVSTEQPAKETS-----SN 1417
Query: 946 SEAPFKIQKVVTSEAANALPEKIVTEFYEALPESQLET 983
E P + T A +TE E + Q+ET
Sbjct: 1418 VEQPAPENSINTGSATT------MTETAEKSDKPQMET 1449
>SEPL_MOUSE (Q62170) P-selectin glycoprotein ligand 1 precursor
(PSGL-1) (Selectin P ligand)
Length = 397
Score = 39.3 bits (90), Expect = 0.059
Identities = 41/148 (27%), Positives = 60/148 (39%), Gaps = 14/148 (9%)
Query: 850 TATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEPIQTDPMQAEVAAGTKPMQAEVEA 909
T+ E +Q + E + PM+AE PM+ E Q PM+A+ +KP E E
Sbjct: 130 TSVETVQPASTEVETSQPA-PMEAETSQPA-PMEAETSQPAPMEADT---SKPAPTEAET 184
Query: 910 GTEPMQPEVEAGTQPMHTASTQDPPRHTTKIVKVKNSEAPF-------KIQKVVTSEAAN 962
++P E E + A T P + K +EA ++ + T+ AA
Sbjct: 185 -SKPAPTEAETSQPAPNEAETSKPAPTEAETSKPAPTEAETTQLPRIQAVKTLFTTSAAT 243
Query: 963 ALPEKIVTEFYEALPESQLET-SLGPDV 989
+P T A ES T LGP V
Sbjct: 244 EVPSTEPTTMETASTESNESTIFLGPSV 271
>E15R_MOUSE (Q60902) Epidermal growth factor receptor substrate
15-like 1 (Eps15-related protein) (Eps15R) (Epidermal
growth factor receptor pathway substrate 15 related
sequence) (Eps15-rs)
Length = 907
Score = 39.3 bits (90), Expect = 0.059
Identities = 24/91 (26%), Positives = 43/91 (46%), Gaps = 16/91 (17%)
Query: 849 STATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEPIQTDPMQAEVAAGTKPMQAEVE 908
S ++ + DP QAE +P +++ G +P + +P Q+DP + A T P
Sbjct: 607 SNNSQELHPDPFQAE-----DPFKSDPFKGADPFKGDPFQSDPFSEQQTAATDPF----- 656
Query: 909 AGTEPMQPEVEAGTQPMHTASTQDPPRHTTK 939
G +P + + P H++S+ D + TK
Sbjct: 657 -GGDPFKE-----SDPFHSSSSDDFFKKQTK 681
>NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa
neurofilament protein) (Neurofilament heavy polypeptide)
(NF-H)
Length = 1087
Score = 38.9 bits (89), Expect = 0.077
Identities = 45/227 (19%), Positives = 86/227 (37%), Gaps = 20/227 (8%)
Query: 829 DVQNPEAAKRKRKTPRR-----KNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQ 883
+V++PE AK K + K+ A P++ D A + E ++ V+ G +P
Sbjct: 763 EVKSPEKAKTPVKEGAKSPAEAKSPEKAKSPVKEDIKPPAEAKSPEKAKSPVKEGAKP-- 820
Query: 884 TEPIQTDPMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPRHTTKIVKV 943
P + P+ + P+Q E T+ PE S + T++ V
Sbjct: 821 --PEKAKPLDVKSPEAQTPVQEEATVPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAP 878
Query: 944 KNSEAPFKIQKVVTSEAANALPEKIVTEFYEALPESQLETSLGPDV--------FDDLDD 995
K E +++ V A P+K+ E P+++ + S + ++ +
Sbjct: 879 KKEEVKSPVKEEV---KAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKE 935
Query: 996 SVLAAITDQMFEAAEKEFNVVNVVKSRNEQKKKTLGLKKSVKAGRKS 1042
+ D EA ++E + E+ LG+K+ K K+
Sbjct: 936 TPTEKPKDSTAEAKKEEAGEKKKAVASEEETPAKLGVKEEAKPKEKT 982
Score = 32.3 bits (72), Expect = 7.2
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 824 RRCKSDVQNPEAAK----RKRKTPRRKNTSTATEPMQTDPMQAEVAAATE---PMQAEVE 876
+ K D EA K K++TP K + E + + + + A A+E P + V+
Sbjct: 914 KESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAEAKKEEAGEKKKAVASEEETPAKLGVK 973
Query: 877 AGTEPMQ-TEPIQTDPMQAEVAAGTKPMQAEVEAGTE-PMQPEVEAGTQPMHTASTQDPP 934
+P + TE +T+ + +KP + E E P PE + T+ T ++ P
Sbjct: 974 EEAKPKEKTETTKTEAEDTKAKEPSKPTETEKPKKEEMPAAPE-KKDTKEEKTTESRKPE 1032
Query: 935 RHTTKIVKVKNSE 947
KVK +
Sbjct: 1033 EKPKMEAKVKEDD 1045
>DAMX_ECO57 (Q8X826) DamX protein
Length = 428
Score = 38.9 bits (89), Expect = 0.077
Identities = 38/141 (26%), Positives = 56/141 (38%), Gaps = 22/141 (15%)
Query: 842 TPRRKNTSTATEPMQTDPMQAEVA-AATEPM---QAEVEAGTEPMQTEPIQTDPMQ---- 893
TP + T AT+ Q +Q ++ A T+P Q A + TEP P++
Sbjct: 179 TPTQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNA 238
Query: 894 ---------AEVAAGTKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPRHTTKIVKVK 944
AE A T+P A +A EP +P+ T+P A T P+ T V
Sbjct: 239 SRDTAKTQTAERPATTRP--ARQQAVIEPKKPQATVKTEPKPVAQT---PKRTEPAAPVA 293
Query: 945 NSEAPFKIQKVVTSEAANALP 965
+++AP E A P
Sbjct: 294 STKAPAATSTPAPKETATTAP 314
>MAPB_RAT (P15205) Microtubule-associated protein 1B (MAP 1B)
(Neuraxin) [Contains: MAP1 light chain LC1]
Length = 2459
Score = 38.5 bits (88), Expect = 0.10
Identities = 41/189 (21%), Positives = 74/189 (38%), Gaps = 14/189 (7%)
Query: 852 TEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEPIQTDPMQAEVAAGTKPMQAEVEAGT 911
T + T P++ + ++ T+P+ ++ ++ + + E TK Q E
Sbjct: 521 TGQVSTPPVKQVKLKQRADSRESLKPATKPLSSKSVRKESKE-EAPEATKASQVEKTPKV 579
Query: 912 EPMQPEVEAGTQPMHTASTQDPPRHTTKIVKVKNSEAPFKIQ---KVVTSEAANALPEKI 968
E + + +P + P T K V K ++P K + K T +K+
Sbjct: 580 ESKEKVIVKKDKP---GKVESKPSVTEKEVPSKEEQSPVKAEVAEKAATESKPKVTKDKV 636
Query: 969 VTEFYEALPESQLETSLGPDVFDDLDDSVLAAITDQMFEAAEKEFNVVNVVKSRNEQKKK 1028
V + + PE + E +V D + L E A+KE + + E+KK+
Sbjct: 637 VKKEIKTKPEEKKEEKPKKEVAKKEDKTPLKKDEKPKKEEAKKEIK----KEIKKEEKKE 692
Query: 1029 TLGLKKSVK 1037
LKK VK
Sbjct: 693 ---LKKEVK 698
>IF2C_EUGGR (Q9XEK9) Translation initiation factor IF-2, chloroplast
(Fragment)
Length = 822
Score = 38.5 bits (88), Expect = 0.10
Identities = 22/77 (28%), Positives = 32/77 (40%), Gaps = 3/77 (3%)
Query: 876 EAGTEPMQTEPIQTDPMQAEVAAGTKPMQAEVEAGTEPMQPEVEAG---TQPMHTASTQD 932
EA T P +P+ P V AG QAEV+ +P P + +P+ TA
Sbjct: 26 EAPTSPSARQPVTQVPQANSVPAGAVASQAEVKKPADPQPPATPSAPVLRRPVRTAMPAS 85
Query: 933 PPRHTTKIVKVKNSEAP 949
PPR + + + P
Sbjct: 86 PPRMVINLDDIPDRSKP 102
>HMW1_MYCPN (Q50365) Cytadherence high molecular weight protein 1
(Cytadherence accessory protein 1)
Length = 1018
Score = 38.5 bits (88), Expect = 0.10
Identities = 50/181 (27%), Positives = 78/181 (42%), Gaps = 43/181 (23%)
Query: 827 KSDVQNPEAAKRKRKTPRRKNTSTATEPMQTDPMQ-----AEVA--AATEPMQAEV---- 875
+S++ PEAA TE QT+P AE+ TEP+ A V
Sbjct: 299 QSEMVQPEAA-----------AEPVTEAQQTEPTPVVETIAEITPQVVTEPVVAVVEHQP 347
Query: 876 EAGTEPMQTEP--------IQTDPMQAEVAAGTKPMQAEVEAGTEPMQPE--VEAGTQPM 925
EA EP+ EP I T+ +Q EV + P+ AEV+ +E +QPE VE +P
Sbjct: 348 EAVAEPLPVEPAVAGVSELIPTEQVQPEVVVESTPV-AEVQ--SEMVQPEVAVEPIVEPQ 404
Query: 926 HTASTQDPPRHTT-----KIVKVKNSEAPFKIQKVVTSEAANAL---PEKIVTEFYEALP 977
+ P T +++V+ ++++VV + + PE +V EA+
Sbjct: 405 PEQPVEVQPEVITTPEVASVLEVQPENPVVEVEQVVEPQPETPVEVQPEPVVETVQEAVA 464
Query: 978 E 978
E
Sbjct: 465 E 465
Score = 36.6 bits (83), Expect = 0.38
Identities = 51/190 (26%), Positives = 78/190 (40%), Gaps = 38/190 (20%)
Query: 833 PEAAKRKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEP------ 886
P+A + + + P ++ A E +Q +P+ AEV + +A E TE QTEP
Sbjct: 272 PQAVQTQPEIPAEQS---AVE-LQPEPV-AEVQSEMVQPEAAAEPVTEAQQTEPTPVVET 326
Query: 887 -------IQTDPM------QAEVAAGTKPMQAEVEA-----GTEPMQPEVEAGTQPM-HT 927
+ T+P+ Q E A P++ V TE +QPEV + P+
Sbjct: 327 IAEITPQVVTEPVVAVVEHQPEAVAEPLPVEPAVAGVSELIPTEQVQPEVVVESTPVAEV 386
Query: 928 ASTQDPPRHTTKIVKVKNSEAPFKIQK--VVTSEAANAL---PEKIVTE---FYEALPES 979
S P + + E P ++Q + T E A+ L PE V E E PE+
Sbjct: 387 QSEMVQPEVAVEPIVEPQPEQPVEVQPEVITTPEVASVLEVQPENPVVEVEQVVEPQPET 446
Query: 980 QLETSLGPDV 989
+E P V
Sbjct: 447 PVEVQPEPVV 456
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,971,578
Number of Sequences: 164201
Number of extensions: 5900695
Number of successful extensions: 16960
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 16657
Number of HSP's gapped (non-prelim): 355
length of query: 1105
length of database: 59,974,054
effective HSP length: 121
effective length of query: 984
effective length of database: 40,105,733
effective search space: 39464041272
effective search space used: 39464041272
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)
Medicago: description of AC144459.6