Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144459.10 + phase: 0 
         (167 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PLO1_SCHPO (P50528) Serine/threonine-protein kinase plo1 (EC 2.7...    35  0.061
COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4                34  0.14
RALB_TODPA (P49193) Retinal-binding protein (RALBP)                    33  0.23
YPV2_METTF (P29571) Hypothetical 33.2 kDa protein (ORF2)               31  1.5
DNAK_GUITH (P29215) Chaperone protein dnaK (Heat shock protein 7...    30  2.6
ZF37_HUMAN (Q9Y6Q3) Zinc finger protein 37 homolog (Zfp-37)            30  3.3
YPZ2_METTF (P29572) Hypothetical 33.1 kDa protein (ORF2')              30  3.3
KGUA_BUCAP (Q8K9C7) Guanylate kinase (EC 2.7.4.8) (GMP kinase)         29  4.4
STIM_DROME (P83094) Stromal interaction molecule homolog precursor     29  5.7
MYC2_XENLA (P15171) Myc II protein (C-Myc II)                          29  5.7
MT28_YEAST (P40573) Transcriptional activator of sulfur metaboli...    29  5.7
YKG5_YEAST (P35723) Hypothetical 23.4 kDa protein in NDK1-MNR2 i...    28  7.4
SPEE_PYRAB (Q9V277) Probable spermidine synthase (EC 2.5.1.16) (...    28  7.4
MYC1_XENLA (P06171) Myc I protein (C-Myc I)                            28  7.4
GSR2_CAEEL (Q9NEU5) Hypothetical protein Y39B6A.33 in chromosome V     28  7.4
YA88_MYCPN (P75605) Hypothetical protein MPN088 (R02_orf101)           28  9.7
HTPG_BDEBA (P61184) Chaperone protein htpG (Heat shock protein h...    28  9.7
CHEB_METMP (P62647) Chemotaxis response regulator protein-glutam...    28  9.7

>PLO1_SCHPO (P50528) Serine/threonine-protein kinase plo1 (EC
           2.7.1.37)
          Length = 683

 Score = 35.4 bits (80), Expect = 0.061
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 6/127 (4%)

Query: 46  ENVFFCNKWQEFVEYYSIGYGCFISFKYEGNSKFSVIIFDATSVEISYPFETPSTNGEPK 105
           E V F  KW ++   Y +GY           +  + ++F A    + Y      T  +P 
Sbjct: 489 EPVLFITKWVDYSNKYGLGYQLSDESVGVHFNDDTSLLFSADEEVVEYALHPKDTEIKPY 548

Query: 106 TNYPSSRKRSKVETCERLRKKVKN-MSKYASKRVEDAA----KELNPNNPYFRSKIVKGK 160
             YP+S+    + +  +L K  K+ M +  SK V+D +    K    N   F    ++ +
Sbjct: 549 I-YPASKVPESIRSKLQLLKHFKSYMGQNLSKAVQDESFEKPKNSTSNTMLFMQHYLRTR 607

Query: 161 YAVRFLL 167
            A+ F L
Sbjct: 608 QAIMFRL 614


>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4
          Length = 362

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 33/112 (29%), Positives = 54/112 (47%), Gaps = 20/112 (17%)

Query: 61  YSIGYGCFISFKYEGNSKFSVIIFDATSV-EISYPFETPSTNG-EPKTN----YPSSRKR 114
           Y  GY C IS     +S    ++ D  SV ++SYP+  P+T+G +P T       S+ + 
Sbjct: 238 YGGGYNC-ISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADPGTQRAVPLTSAERE 296

Query: 115 SKVETCERLRK--KVKNMSKYASKRVEDAAKELNPNNPYFRSKIVKGKYAVR 164
           ++V      RK  K +   +YAS++   A  E+ P         +KG++A R
Sbjct: 297 ARVMRYREKRKNRKFEKTIRYASRK---AYAEMRPR--------IKGRFAKR 337


>RALB_TODPA (P49193) Retinal-binding protein (RALBP)
          Length = 342

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 11  IPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCF 68
           +P EF     ++   + TITV  G    +E +   EN +   KW+   E + IG+G F
Sbjct: 203 VPKEFYLENTDDFETMETITVGSGDKIYVEYEIENENTYI--KWEYKTEEHDIGFGLF 258


>YPV2_METTF (P29571) Hypothetical 33.2 kDa protein (ORF2)
          Length = 284

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 12/50 (24%), Positives = 26/50 (52%)

Query: 12 PDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYY 61
          P EF ++   ++NN+      +  + + ELK    ++F C  ++  V+Y+
Sbjct: 30 PAEFESKLEGDINNILDYVFDESGLKRRELKWNKIDIFRCRAYERIVDYF 79


>DNAK_GUITH (P29215) Chaperone protein dnaK (Heat shock protein 70)
           (Heat shock 70 kDa protein) (HSP70)
          Length = 627

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 21/54 (38%), Positives = 30/54 (54%), Gaps = 3/54 (5%)

Query: 90  EISYPFETPSTNGEPKTNYPSSRKRSKVE--TCERLRKKVKNMSKYASKRVEDA 141
           ++SY  +T S NG  K + PS +K    E  + E LRK V + SKY  + V+ A
Sbjct: 86  QVSYIVKTDS-NGNIKLDCPSLKKEFASEEISAEVLRKLVDDASKYLGESVKQA 138


>ZF37_HUMAN (Q9Y6Q3) Zinc finger protein 37 homolog (Zfp-37)
          Length = 597

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 101 NGEPKTNYPSSRKRSKVETCERLRKK---VKNMSKYASKRVEDAAKELNPNNPYFRSKIV 157
           N   K + PS ++  K E+C ++ K+   + + S+   KR  DAAKE   +  +  S   
Sbjct: 128 NNLHKKHVPSKKRLLKFESCGKILKQNLDLPDHSRNCVKRKSDAAKEHKKSFNHSLSDTR 187

Query: 158 KGK 160
           KGK
Sbjct: 188 KGK 190


>YPZ2_METTF (P29572) Hypothetical 33.1 kDa protein (ORF2')
          Length = 284

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 12/50 (24%), Positives = 27/50 (54%)

Query: 12 PDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYY 61
          P EF +    ++N++    V +  + + ELK    ++F C  +++ V+Y+
Sbjct: 30 PAEFGSELEGDINSILDSVVDESGLKRRELKWNKIDIFRCRAYEKIVDYF 79


>KGUA_BUCAP (Q8K9C7) Guanylate kinase (EC 2.7.4.8) (GMP kinase)
          Length = 207

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 12/104 (11%)

Query: 53  KWQEFVEYYSIGYGCFISFKYEGNSKFSVIIFDATSVEISYPFETPSTNGEPKTNYPSSR 112
           K + F+EY  +         Y G S+ S+     + +++    +    N + +   P+S+
Sbjct: 67  KQESFLEYAKVFNN------YYGTSRQSIEKMLLSGIDVFLDIDWQGAN-QIRYKMPNSK 119

Query: 113 K-----RSKVETCERLRKKVKNMSKYASKRVEDAAKELNPNNPY 151
                  SK E  +RLR++ ++     SKR+E A  E+N  + Y
Sbjct: 120 SIFLLPPSKDELYKRLRERGQDSDTVISKRMEKAVDEMNHYSEY 163


>STIM_DROME (P83094) Stromal interaction molecule homolog precursor
          Length = 570

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 91  ISYPFETPSTNGEPKTNYPSSRKRSKVETCERLRKK 126
           + Y +E  S N + K      + +S  E CE+LRKK
Sbjct: 417 LQYTYELESKNHQKKRTSAEKQLQSAREACEKLRKK 452


>MYC2_XENLA (P15171) Myc II protein (C-Myc II)
          Length = 420

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)

Query: 97  TPSTNGEPKTNYPSSRKRSKVETCERLRKKVKNMSKYASKRVEDA 141
           +PST    K +Y SS KR+K+E+  R+ K++ N  K AS R  D+
Sbjct: 293 SPST----KVDYVSS-KRAKLESNVRVLKQISNNRKCASPRSSDS 332


>MT28_YEAST (P40573) Transcriptional activator of sulfur metabolism
           MET28
          Length = 187

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 18/81 (22%), Positives = 35/81 (42%), Gaps = 10/81 (12%)

Query: 86  ATSVEISYPFETPSTNGEPKTNYPSSRKRSKVETCERLR-----KKVKNMSKYAS----- 135
           AT+  +    E P +           R+R   E  +R R     K  +NM+K  +     
Sbjct: 85  ATTAVVVKEEEAPVSTSNELDKIKQERRRKNTEASQRFRIRKKQKNFENMNKLQNLNTQI 144

Query: 136 KRVEDAAKELNPNNPYFRSKI 156
            ++ D  ++LN  N ++++K+
Sbjct: 145 NKLRDRIEQLNKENEFWKAKL 165


>YKG5_YEAST (P35723) Hypothetical 23.4 kDa protein in NDK1-MNR2
           intergenic region
          Length = 206

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 5/45 (11%)

Query: 98  PSTNGEPKTNYPSSRK-----RSKVETCERLRKKVKNMSKYASKR 137
           PS+N +  +N   S K     R K  + E L+K+VKN+ KY  ++
Sbjct: 146 PSSNSKKDSNEADSTKLQEELRKKQISLEGLQKQVKNLEKYFDEK 190


>SPEE_PYRAB (Q9V277) Probable spermidine synthase (EC 2.5.1.16)
          (Putrescine aminopropyltransferase) (SPDSY)
          Length = 279

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 14/30 (46%), Positives = 18/30 (59%), Gaps = 3/30 (10%)

Query: 56 EFVEYYSIGYGCFISFK---YEGNSKFSVI 82
          EF+E+Y  GYG     K   +EG+SKF  I
Sbjct: 2  EFIEWYPRGYGVAFKVKEKIFEGHSKFQKI 31


>MYC1_XENLA (P06171) Myc I protein (C-Myc I)
          Length = 419

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)

Query: 97  TPSTNGEPKTNYPSSRKRSKVETCERLRKKVKNMSKYASKRVEDA 141
           +PST    K +Y SS KR+K+E+  R+ K++ N  K AS R  D+
Sbjct: 292 SPST----KVDYVSS-KRAKLESNIRVLKQISNNRKCASPRSSDS 331


>GSR2_CAEEL (Q9NEU5) Hypothetical protein Y39B6A.33 in chromosome V
          Length = 438

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 8/70 (11%)

Query: 96  ETPSTNGEPKTNYPSSRKRSKVETCERLRK-------KVKNMSKYASKRVEDAAKELNPN 148
           E  ++    KT   +  K  +VE C+R+ K       K + + K   +R+E+ AKE + +
Sbjct: 259 EAGNSEKSMKTGGEAEPKSQRVE-CDRMTKEQKKKKAKAQKLDKEEKRRLEEKAKEQDSH 317

Query: 149 NPYFRSKIVK 158
           N Y   ++ K
Sbjct: 318 NVYRTKQLHK 327


>YA88_MYCPN (P75605) Hypothetical protein MPN088 (R02_orf101)
          Length = 101

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/47 (29%), Positives = 25/47 (52%), Gaps = 2/47 (4%)

Query: 82  IIFDATSVEISYP--FETPSTNGEPKTNYPSSRKRSKVETCERLRKK 126
           +I +  +V+ + P  F+T  TN    TN P S +   ++  ERL+ +
Sbjct: 51  VIANTYTVQANVPTAFQTSETNSNTVTNVPKSPELISIQRLERLKNR 97


>HTPG_BDEBA (P61184) Chaperone protein htpG (Heat shock protein
           htpG) (High temperature protein G)
          Length = 625

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 106 TNYPSSRKRSKVETCERLRKKVKNMSK-YASKRVEDAAKELNPNNPYFRSKI 156
           TN P+    S  +    ++K +  M K YA ++V+    E+NPN+P F   +
Sbjct: 526 TNTPACLVASSADPSAHMQKLMAQMGKEYAGQQVK-RIMEINPNHPVFEKML 576


>CHEB_METMP (P62647) Chemotaxis response regulator protein-glutamate
           methylesterase (EC 3.1.1.61)
          Length = 365

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 15/59 (25%)

Query: 6   FLMQRIPDEFITRFGNELNNVATITVPD---GRVWK------------MELKKRGENVF 49
           F++Q +P  F   F   +NN + ITV +   G + K            M L+KRG NV+
Sbjct: 204 FIVQHMPKGFTRVFAERMNNNSAITVKEAEHGEIVKPDHAYVAPGDSQMVLQKRGGNVY 262


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.320    0.136    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,661,912
Number of Sequences: 164201
Number of extensions: 837339
Number of successful extensions: 2374
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2370
Number of HSP's gapped (non-prelim): 18
length of query: 167
length of database: 59,974,054
effective HSP length: 102
effective length of query: 65
effective length of database: 43,225,552
effective search space: 2809660880
effective search space used: 2809660880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)


Medicago: description of AC144459.10