BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144430.8 - phase: 0 /pseudo
         (91 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PO11_SCICO (Q03277) Retrovirus-related Pol polyprotein from type...    34  0.057
MAY3_SCHCO (P37934) Mating-type protein A-alpha Y3                     30  1.4
Y776_RHILO (Q98M18) Hypothetical UPF0283 protein mlr0776               29  1.8

>PO11_SCICO (Q03277) Retrovirus-related Pol polyprotein from type I
           retrotransposable element R1 [Contains: Reverse
           transcriptase (EC 2.7.7.49); Endonuclease] (Fragment)
          Length = 1004

 Score = 34.3 bits (77), Expect = 0.057
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 2   LHKRGMSPTDVCTRCNSTSEDVFHCLLDCAFPRNL 36
           LHKRG+S T VC  C + +EDV H L +C    +L
Sbjct: 919 LHKRGLSNTPVC-MCGAPNEDVKHLLGECPLYEDL 952


>MAY3_SCHCO (P37934) Mating-type protein A-alpha Y3
          Length = 926

 Score = 29.6 bits (65), Expect = 1.4
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 11  DVCTRCNSTSEDVFHCLLDCAFPRNLWLAISFDNINFFLEHNLGWWIIIGLDRQLPHLFL 70
           + C+R  ST ++ F        PRNL L +S  +  +  +     W ++    Q+P L  
Sbjct: 75  EACSRWRSTVDESFKATASAVSPRNLHLLLSLRHHVYAQQVQKWLWQVL----QVPEL-- 128

Query: 71  SAVWLLWMARNRACIAQEPST 91
              W   MA+ RA I     T
Sbjct: 129 ---WKAEMAKQRAHITATMDT 146


>Y776_RHILO (Q98M18) Hypothetical UPF0283 protein mlr0776
          Length = 361

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 18/53 (33%), Positives = 26/53 (48%), Gaps = 4/53 (7%)

Query: 34  RNLWLAISFDNINFFLEHNLGWWIIIGLDRQLPHLFLSAVWLLWMARNRACIA 86
           R+L+ +I F  I   +   +G W     D+ +  LF  A WL W+A   A IA
Sbjct: 71  RSLFGSIFFGAIGVLVSLAVGLWT----DQLIRDLFARAEWLGWLAAGMAAIA 119


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.331    0.141    0.509 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,728,925
Number of Sequences: 164201
Number of extensions: 407497
Number of successful extensions: 854
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 853
Number of HSP's gapped (non-prelim): 3
length of query: 91
length of database: 59,974,054
effective HSP length: 67
effective length of query: 24
effective length of database: 48,972,587
effective search space: 1175342088
effective search space used: 1175342088
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 58 (26.9 bits)