BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144375.6 - phase: 0
(1419 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DNL1_HUMAN (P18858) DNA ligase I (EC 6.5.1.1) (Polydeoxyribonucl... 292 5e-78
DNL1_XENLA (P51892) DNA ligase I (EC 6.5.1.1) (Polydeoxyribonucl... 290 3e-77
DNLI_ARATH (Q42572) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 289 3e-77
DNL1_MOUSE (P37913) DNA ligase I (EC 6.5.1.1) (Polydeoxyribonucl... 284 1e-75
DNL1_RAT (Q9JHY8) DNA ligase I (EC 6.5.1.1) (Polydeoxyribonucleo... 278 1e-73
DNLI_SCHPO (P12000) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 250 2e-65
DNLI_CAEEL (Q27474) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 233 3e-60
DNLI_YEAST (P04819) DNA ligase I, mitochondrial precursor (EC 6.... 225 6e-58
YF31_SCHPO (Q10264) Hypothetical protein C22A12.01c in chromosome I 192 5e-48
DNLI_ACIAM (Q02093) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 152 6e-36
DNLI_SULSO (Q980T8) Thermostable DNA ligase (EC 6.5.1.1) (Polyde... 150 3e-35
DNLI_SULSH (Q9P9K9) Thermostable DNA ligase (EC 6.5.1.1) (Polyde... 148 9e-35
DNLI_THEVO (Q979A1) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 147 2e-34
DNLI_PYRAE (O93723) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 147 2e-34
DNLI_AQUAE (O67398) Probable DNA ligase (EC 6.5.1.1) (Polydeoxyr... 146 4e-34
DNLI_AERPE (Q9YD18) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 144 2e-33
DNLI_THEAC (Q9HJ26) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 142 5e-33
DNLI_METKA (Q8TWN3) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 134 2e-30
DNLI_SULTO (Q976G4) Thermostable DNA ligase (EC 6.5.1.1) (Polyde... 127 2e-28
DNLI_METTF (P54875) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 123 4e-27
>DNL1_HUMAN (P18858) DNA ligase I (EC 6.5.1.1)
(Polydeoxyribonucleotide synthase [ATP])
Length = 919
Score = 292 bits (747), Expect = 5e-78
Identities = 201/675 (29%), Positives = 327/675 (47%), Gaps = 32/675 (4%)
Query: 513 FHEQVNSSQTPVPTHRSCSSNDTSPLSKSNLKSFS---SNDASPFSKSNLNNTNSTTKKL 569
FH + S SS +T P K+ LK ++ S SP + +
Sbjct: 9 FHPKKEGKAKKPEKEASNSSRETEPPPKAALKEWNGVVSESDSPVKRPGRKAARVLGSEG 68
Query: 570 DLFRSQESKLTNLRKALS-NQISPSKRKKGSESKSNKKVKVKAKSESSG-SKQATITKFF 627
+ S + AL +Q+SP + E+ ++ S SG K+ T K
Sbjct: 69 EEEDEALSPAKGQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPKRRTARKQL 128
Query: 628 GKA--MPVMPGDTQSDQFGSKPGESPEVEELVPTDAGNMYKQEIDQFMQIINGDESLKKQ 685
K V+ ++ + +K + E EE T ++ + E+ + +GD+
Sbjct: 129 PKRTIQEVLEEQSEDEDREAKRKKEEEEEE---TPKESLTEAEVATEKEGEDGDQPTTPP 185
Query: 686 AITIIEEAKGDINKALDIYYSNSCNLGEREISVQGECKVDRPLEKKYVSKELNVIPDISM 745
+A+ + + L E E + + + L + ++ V ++
Sbjct: 186 KPLKTSKAETPTESVSEPEVATKQELQEEEEQTKPPRRAPKTLSSFFTPRKPAVKKEVKE 245
Query: 746 HR--------VLRDNVDATHVSLPSDKYNPKEHACWRDGQPAPYLHLARTFSLLEDEKGK 797
+D + + + Y+P E ACW+ GQ PYL +ARTF +E+ +
Sbjct: 246 EEPGAPGKEGAAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSAR 305
Query: 798 IKATSILCNMFRSLLVLSPEDVLPAVYLCTNKIAADHENVELNIGGSLVTTALEEACGTN 857
++ L N+ RS++ LSP D+LP +YL N + + +EL +G ++ A+ +A G
Sbjct: 306 LRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQ 365
Query: 858 RLKIKEMYNKLGDLGDVAQECRQTQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKG 917
++ + GD+G VA+ R TQRL+ PP PL ++S R I+ TG+ ST +K
Sbjct: 366 LESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKID 425
Query: 918 IILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVVMNS-----RPTVYEEG- 971
II L +CR E +F+ R+L LR+G ++VL AL+ AV + P + + G
Sbjct: 426 IIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGK 485
Query: 972 --TAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLA 1029
TAE K L+ + + + + +P+LD I+P L+ G+E + PGIP+KPMLA
Sbjct: 486 GKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLA 545
Query: 1030 KITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSRNGDESTSRFPDLVDMI 1089
T GI + LK F+ AFTCEYKYDGQRAQIH L G V +FSRN +++T ++PD++ I
Sbjct: 546 HPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRI 605
Query: 1090 KESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDTLVTKESIKVGICIFVF 1149
+ P ++FI+D E V DR+ +I FQ L++R R D I+V +C++ F
Sbjct: 606 PKIKLPSVTSFILDTEAVAWDREKK-QIQPFQVLTTRKRKEVDA----SEIQVQVCLYAF 660
Query: 1150 DIMFANGEHLA-DPL 1163
D+++ NGE L +PL
Sbjct: 661 DLIYLNGESLVREPL 675
>DNL1_XENLA (P51892) DNA ligase I (EC 6.5.1.1)
(Polydeoxyribonucleotide synthase [ATP])
Length = 1070
Score = 290 bits (741), Expect = 3e-77
Identities = 160/414 (38%), Positives = 245/414 (58%), Gaps = 13/414 (3%)
Query: 754 DATHVSLPSDKYNPKEHACWRDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFRSLLV 813
+ T + KY+P + ACW +GQ PYL +ARTF +E+E ++K L N RS++
Sbjct: 415 EQTEYNPSKSKYHPIDDACWCNGQKVPYLAVARTFERIEEESARLKNVETLSNFLRSVIA 474
Query: 814 LSPEDVLPAVYLCTNKIAADHENVELNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGD 873
L+PED+LP +YLC N++ +E +EL IG +++ A+ +A G KIK + GDLG
Sbjct: 475 LTPEDLLPCIYLCLNRLGPAYEGLELGIGETILMKAVAQATGRQLEKIKAEAQEKGDLGL 534
Query: 874 VAQECRQTQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKF 933
VA+ R QR + P L+ ++ L+ I+ TGN S +K II L +CR E ++
Sbjct: 535 VAESSRSNQRTMFTPPKLMASGVFGKLKDIARMTGNASMNKKIDIIKGLFVACRHSEARY 594
Query: 934 LVRTLVRNLRIGAMLRTVLPALAHAVVM-----NSRPTVYEEG---TAENLKAALQVLSV 985
+ R+L LRIG ++VL ++A AV + ++ PTV + G +A+ K+ ++ ++
Sbjct: 595 IARSLGGKLRIGLAEQSVLSSIAQAVCLTPPGRDAPPTVMDAGKGMSADARKSWIEEKAM 654
Query: 986 AVVEAYNILPNLDIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNK 1045
+ + + LPN D I+P L+ GI+ + PGIP+KPMLA T GI + LK F
Sbjct: 655 ILKQTFCELPNYDAIIPILLEHGIDDLPKHCRLTPGIPLKPMLAHPTKGIGEVLKRFDEA 714
Query: 1046 AFTCEYKYDGQRAQIHKLVDGSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAE 1105
AFTCEYKYDG+RAQIH L +G V V+SRN + +T+++PD++ I + K + I+D E
Sbjct: 715 AFTCEYKYDGERAQIHILENGEVHVYSRNQENNTTKYPDIISRIPKIKKESVKSCILDTE 774
Query: 1106 VVGIDRKNGCRIMSFQELSSRGRGGKDTLVTKESIKVGICIFVFDIMFANGEHL 1159
V D + +I FQ L++R R KD V IKV +C++ FD+++ NGE L
Sbjct: 775 AVAGDAEKK-QIQPFQVLTTRKR--KD--VDASEIKVQVCVYAFDMLYLNGESL 823
>DNLI_ARATH (Q42572) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 790
Score = 289 bits (740), Expect = 3e-77
Identities = 156/399 (39%), Positives = 235/399 (58%), Gaps = 10/399 (2%)
Query: 761 PSDKYNPKEHACWRDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVL 820
P+D ++P++ +CW G+ P+L +A F L+ +E G+I T ILCNM R+++ +PED++
Sbjct: 158 PND-FDPEKMSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPEDLV 216
Query: 821 PAVYLCTNKIAADHENVELNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQ 880
VYL N+IA HE VEL IG S + A+ EA G +K+ +LGDLG VA+ R
Sbjct: 217 ATVYLSANEIAPAHEGVELGIGESTIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRS 276
Query: 881 TQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVR 940
TQ ++ P PL + ++ R+I+ ++G S +KK + L+ + + E +L R L
Sbjct: 277 TQTMMFKPEPLTVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQA 336
Query: 941 NLRIGAMLRTVLPALAHAVVMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDII 1000
LR+G +TVL AL A V N N K+ L+ + V + + +LP DII
Sbjct: 337 KLRLGFSGQTVLAALGQAAVYNEE----HSKPPPNTKSPLEEAAKIVKQVFTVLPVYDII 392
Query: 1001 VPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQI 1060
VP L++ G+ + + G+PI PMLAK T G+ + L FQ+ FTCEYKYDG+RAQI
Sbjct: 393 VPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQI 452
Query: 1061 HKLVDGSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSF 1120
H + DG+ ++SRN + +T ++PD+ + KP +FI+D EVV DR+ +I+ F
Sbjct: 453 HFMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKK-KILPF 511
Query: 1121 QELSSRGRGGKDTLVTKESIKVGICIFVFDIMFANGEHL 1159
Q LS+R R V IKVG+CIF FD+++ NG+ L
Sbjct: 512 QILSTRARKN----VNVNDIKVGVCIFAFDMLYLNGQQL 546
>DNL1_MOUSE (P37913) DNA ligase I (EC 6.5.1.1)
(Polydeoxyribonucleotide synthase [ATP])
Length = 916
Score = 284 bits (727), Expect = 1e-75
Identities = 154/418 (36%), Positives = 241/418 (56%), Gaps = 13/418 (3%)
Query: 750 RDNVDATHVSLPSDKYNPKEHACWRDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFR 809
+ +D + + + Y+P E ACW+ GQ P+L +ARTF +E+ ++K L N+ R
Sbjct: 256 KGTLDPANYNPSKNNYHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLR 315
Query: 810 SLLVLSPEDVLPAVYLCTNKIAADHENVELNIGGSLVTTALEEACGTNRLKIKEMYNKLG 869
S++ LSP D+LP +YL N++ + +EL +G ++ A+ +A G I+ + G
Sbjct: 316 SVVALSPPDLLPVLYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKG 375
Query: 870 DLGDVAQECRQTQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREK 929
D+G VA+ R TQRL+ PP PL I +++ I+ TG+ S +K II L +CR
Sbjct: 376 DVGLVAENSRSTQRLMLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHS 435
Query: 930 EMKFLVRTLVRNLRIGAMLRTVLPALAHAVVM----NSRPTVYEEG----TAENLKAALQ 981
E +++ R+L LR+G ++VL ALA AV + PTV + TAE K L+
Sbjct: 436 EARYIARSLSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPTVVVDAGKGKTAEARKMWLE 495
Query: 982 VLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKL 1041
+ + + + +P+LD I+P L+ G+E + PG+P+KPMLA T G+ + LK
Sbjct: 496 EQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKR 555
Query: 1042 FQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFI 1101
F+ FTCEYKYDGQRAQIH L G V +FSRN +++T ++PD++ I + P ++FI
Sbjct: 556 FEEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFI 615
Query: 1102 IDAEVVGIDRKNGCRIMSFQELSSRGRGGKDTLVTKESIKVGICIFVFDIMFANGEHL 1159
+D E V DR+ +I FQ L++R R D I+V +C++ FD+++ NGE L
Sbjct: 616 LDTEAVAWDREKK-QIQPFQVLTTRKRKEVDA----SEIQVQVCLYAFDLIYLNGESL 668
>DNL1_RAT (Q9JHY8) DNA ligase I (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 918
Score = 278 bits (710), Expect = 1e-73
Identities = 201/635 (31%), Positives = 317/635 (49%), Gaps = 58/635 (9%)
Query: 537 PLSKSNLKSFSSNDASPFSKSNLNNTNSTTKKLDLFRSQESKLTNLRKALSNQISPSKRK 596
P+S S S S D+ P + N + S +D+ S K RK L + +
Sbjct: 84 PVSDSKQSSPPSPDSCPENSPVFNCSPS----MDISPSGFPKRRTARKQLPKRTIQDTLE 139
Query: 597 KGSESKSNKKVKVKAKSESSGSKQATITKFFGKAMPVMPGDTQSDQFGS---KPGESPEV 653
+ +E K+ K VK K K E + ++T+ A V + Q + + +P ESPE
Sbjct: 140 EPNEDKA-KAVK-KRKKEDPQTPPESLTE----AEEVNQKEEQVEDQPTVPPEPTESPES 193
Query: 654 EELVPTDAGNMYKQEIDQFMQIINGDESLKKQAITIIEEAKGDINKALDIYYSNSCNLGE 713
L T+ M K + Q Q +E K A+G K L +++
Sbjct: 194 VTLTKTENIPMCKAGVKQKPQ----EEEQSKPP------ARGA--KPLSSFFT------P 235
Query: 714 REISVQGECKVDRPLEKKYVSKELNVIPDISMHRVLRDNVDATHVSLPSDKYNPKEHACW 773
R+ +V+ E K + D + D T+ + Y+P E ACW
Sbjct: 236 RKPAVKTEVKQEES--------------DTPRKEETKGAPDPTNYNPSKSNYHPIEDACW 281
Query: 774 RDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLPAVYLCTNKIAAD 833
+ GQ P+L +ARTF +E+ ++K L N+ RS++ LSP D+LP +YL N++
Sbjct: 282 KHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPTDLLPVLYLSLNRLGPP 341
Query: 834 HENVELNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQRLLAPPTPLLI 893
+ +EL +G ++ A+ +A G I+ + GD+G VA+ R TQRL+ P PL +
Sbjct: 342 QQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRLMLPSPPLTV 401
Query: 894 KDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLP 953
+++ I+ TG+ S +K II L +CR E +F+ R+L LR+G ++VL
Sbjct: 402 SGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRYSEARFIARSLSGRLRLGLAEQSVLA 461
Query: 954 ALAHAVVM----NSRPTVYEEG----TAENLKAALQVLSVAVVEAYNILPNLDIIVPTLM 1005
ALA A + PTV + TAE K L+ + + + + +P+LD I+P L+
Sbjct: 462 ALAQAGSLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPDLDRIIPVLL 521
Query: 1006 NKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVD 1065
G+E + PG+P+KPMLA T G+ + LK F+ FTCEYKY GQRAQIH L
Sbjct: 522 EHGLESLPEHCKLSPGVPLKPMLAHPTRGVREVLKRFEEVDFTCEYKYYGQRAQIHVLEG 581
Query: 1066 GSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSS 1125
G V +FSRN ++++ ++PD++ I + P ++FI+D E V DR+ +I FQ L++
Sbjct: 582 GEVKIFSRNQEDNSGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKK-QIQPFQVLTT 640
Query: 1126 RGRGGKDTLVTKESIKVGICIFVFDIMFANGEHLA 1160
R R D I+V +C++ FD+++ NGE LA
Sbjct: 641 RKRKEVDA----SEIQVQVCLYAFDLIYLNGESLA 671
>DNLI_SCHPO (P12000) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 768
Score = 250 bits (639), Expect = 2e-65
Identities = 167/488 (34%), Positives = 258/488 (52%), Gaps = 34/488 (6%)
Query: 680 ESLKKQAITIIEEAKGDINKALDIYYSNSCNLG----EREISVQGECKVDRPLEKKYVSK 735
E K +++ +++E+K ++N + G ERE ++ E K + L S
Sbjct: 61 EKRKVESVKLVDESK----------HNNHDDTGTQNVERENNIVSEAKKQKTLGSSSSSS 110
Query: 736 ELNVIPDISMHRVLRDNVDATHVSLPSDKYNPKEHACWRDGQP--APYLHLARTFSLLED 793
+ +S + D+ +T + LP K P E D A + + + F+ +E+
Sbjct: 111 DA-----VSSNN---DSGASTPIPLPI-KEPPLESNARNDKLKGHATFAEMVKAFTKIEN 161
Query: 794 EKGKIKATSILCNMFRSLLVLSPEDVLPAVYLCTNKIAADHENVELNIGGSLVTTALEEA 853
+++ I+ F +L P D+L VYL NK+ D+ +EL IG S++ A+ E+
Sbjct: 162 TSKRLEIIDIMGTYFFGILRDHPSDLLACVYLSINKLGPDYSGLELGIGESIIMKAIGES 221
Query: 854 CGTNRLKIKEMYNKLGDLGDVAQECRQTQRLLAPPTPLLIKDIYSALRKISVQTGNGSTL 913
G +IK ++K+GDLG VAQ RQ Q + P L I ++ +L+KI+ +GN S
Sbjct: 222 TGQTLQQIKLSFHKVGDLGLVAQTSRQNQPTMFKPAALTIPFLFDSLKKIAQMSGNQSQN 281
Query: 914 RKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVVMNSRPTVYEEGTA 973
RK G+I L+ SC E K+L+R L LR+ +T+L ALA+A E+ +
Sbjct: 282 RKIGVIKRLLSSCEGAEPKYLIRALEGKLRLQLAEKTILVALANATAQYHADKNGEKLSQ 341
Query: 974 ENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITN 1033
++ Q+L + Y LP+ D+IVP L+ G+ + + PGIP KPMLAK T
Sbjct: 342 QDRIEGEQILR----DVYCQLPSYDLIVPHLIEHGLGTLRETCKLTPGIPTKPMLAKPTK 397
Query: 1034 GIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSRNGDESTSRFPDLVDMIKESC 1093
I + L F AFTCEYKYDG+RAQ+H DG VFSRN + + R+PD+ + +
Sbjct: 398 QISEVLNTFDQAAFTCEYKYDGERAQVHFTEDGKFYVFSRNSENMSVRYPDISVSVSKWK 457
Query: 1094 KPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDTLVTKESIKVGICIFVFDIMF 1153
KP A +FI+D E VG DR +I+ FQ+L++R R KD + IKV C+F FDI++
Sbjct: 458 KPDARSFILDCEAVGWDRDEN-KILPFQKLATRKR--KDVKI--GDIKVRACLFAFDILY 512
Query: 1154 ANGEHLAD 1161
NG+ L +
Sbjct: 513 LNGQPLLE 520
>DNLI_CAEEL (Q27474) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 847
Score = 233 bits (594), Expect = 3e-60
Identities = 133/387 (34%), Positives = 209/387 (53%), Gaps = 10/387 (2%)
Query: 773 WRDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLPAVYLCTNKIAA 832
W G PY A T +E+ GK K L F +L SP+D+ VY+ N++
Sbjct: 87 WAKGSKVPYKEFALTLEKIEELSGKKKVDE-LAQFFTKVLDFSPDDLTACVYMSVNQLGP 145
Query: 833 DHENVELNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQRLLAPPTPLL 892
+E +EL + + + A+ +A G KIKE GDLG VAQ+ R Q++LA P L
Sbjct: 146 SYEGLELGVAENSLIKAVAKATGRTEGKIKEDLRAKGDLGTVAQQSRSNQKMLAVPKALT 205
Query: 893 IKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVL 952
+ +++ L +I+ +G + +K I L+ +C+ E +FLVR L +RIG ++VL
Sbjct: 206 VPTVFNKLTEIAKLSGTSAMNKKVDAISALLIACQGIEARFLVRMLAGKMRIGLGEQSVL 265
Query: 953 PALAHAVVMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFS 1012
AL HA ++ G + L + V AY PN + ++ + +G+E
Sbjct: 266 SALGHAFTLSKITDQKVRG--DKLDSLKDANVKRVKTAYCECPNYNRLIEVALTEGVEAL 323
Query: 1013 VSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFS 1072
V + PGIP+KPMLA T GI + ++ F+N+ TCE+KYDG+R QIHK DG + ++S
Sbjct: 324 VEKCKLSPGIPLKPMLAHPTKGIDEIMRRFRNQTMTCEWKYDGERGQIHKREDGQIFIYS 383
Query: 1073 RNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKD 1132
RN + +T+++PD+++ I ++FI+DAEVV ID I+ FQ LS+R R
Sbjct: 384 RNQENNTTKYPDIIEKISSCIGDGVTSFIVDAEVVAIDEAG--LILPFQVLSTRKRKN-- 439
Query: 1133 TLVTKESIKVGICIFVFDIMFANGEHL 1159
+ V + +F+FD+++ NGE L
Sbjct: 440 ---ATDDNGVKVVVFLFDLLYFNGEPL 463
>DNLI_YEAST (P04819) DNA ligase I, mitochondrial precursor (EC
6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
Length = 755
Score = 225 bits (574), Expect = 6e-58
Identities = 132/386 (34%), Positives = 219/386 (56%), Gaps = 17/386 (4%)
Query: 780 PYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLPAVYLCTNKIAADHE-NVE 838
PY + F+ +E +++ I + F ++ S ++++P YL N++ D+E +E
Sbjct: 147 PYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMKQSSKNLIPTTYLFINRLGPDYEAGLE 206
Query: 839 LNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQRLLAPPTPLLIKDIYS 898
L +G +L+ + E CG + +IK Y +GDLG++A R Q + P PL + +++
Sbjct: 207 LGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVFK 266
Query: 899 ALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHA 958
LR I+ G S L+K +I ++ +C+ E KFL+R+L LRIG +TVL +L+ A
Sbjct: 267 NLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSKA 326
Query: 959 VVM---NSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSS 1015
+++ N + ++ + L++A Q + +A+ +PN +I++ + + GI
Sbjct: 327 LLLHDENREDSPDKDVPMDVLESAQQKIR----DAFCQVPNYEIVINSCLEHGIMNLDKY 382
Query: 1016 LSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSRNG 1075
++ PGIP+KPMLAK T I + L FQ + FT EYKYDG+RAQ+H L DG++ ++SRNG
Sbjct: 383 CTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNG 442
Query: 1076 DESTSRFPD--LVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDT 1133
+ T R+P+ + D I++ I+D E V D+ G +I+ FQ LS+R R KD
Sbjct: 443 ENMTERYPEINITDFIQD--LDTTKNLILDCEAVAWDKDQG-KILPFQVLSTRKR--KD- 496
Query: 1134 LVTKESIKVGICIFVFDIMFANGEHL 1159
V +KV +C+F FDI+ N E L
Sbjct: 497 -VELNDVKVKVCLFAFDILCYNDERL 521
>YF31_SCHPO (Q10264) Hypothetical protein C22A12.01c in chromosome I
Length = 560
Score = 192 bits (488), Expect = 5e-48
Identities = 120/375 (32%), Positives = 193/375 (51%), Gaps = 44/375 (11%)
Query: 35 LPPLPS------STIPHSKLIP-NTRFLIDSFRHTTPSSF-TYFLSHFHSDHYSPLSSSW 86
L PLP S +P KL+P N F +D+F + YFLSHFHSDHY L+ W
Sbjct: 169 LLPLPGKQINVRSVVPFYKLMPYNIPFAVDAFAYGAIDGVEAYFLSHFHSDHYGGLTPKW 228
Query: 87 SHGIIFCSPITSHLLINILHIPSPFVHPLSLNQSVVIDGSVVTLIDANHCPGAVQFLFK- 145
HG I+CS +T +LLIN++H+ +V L LNQ I G V ++DANHCPG+ F+F+
Sbjct: 229 KHGPIYCSEVTGNLLINVMHVDEQYVKRLKLNQPYNIMGITVYVLDANHCPGSAMFVFET 288
Query: 146 VNETESPRYVHTGDFRFNREMLLDLNLGEFIGADAVFLDTTYCHPKFVFPTQNESVDYIV 205
+ ++ R +H GDFR +++ ++ L E V+LDTTY +PK+ FP Q + V
Sbjct: 289 LQSNQTRRVLHCGDFRASKDHVMHPVLREKT-IHKVYLDTTYLNPKYTFPPQADVVQACA 347
Query: 206 D---VVKECDGENVLFLVATYVVGKEKILLEIARRCGKKVCVDGKKMEVLRALGYGESGE 262
D +K+ +L +V+TY +GKEK+ + IA+ ++ V +KM +++ L + +
Sbjct: 348 DKAISIKKSTDSRLLVVVSTYSIGKEKVAVAIAKSLSSRIYVVPRKMHIIKQLENQDLID 407
Query: 263 -FTEDRLESNVHVVGWNVLGETWPYFRPNFVRMKEIMVERGYSKVVGFVPTGWTYE---- 317
T+D +++VH+V T PN + + K++G+ TGWT++
Sbjct: 408 LLTDDPTQASVHMV-------TMMGIHPNSLLDYLEQYNSSFDKIIGYKVTGWTFQPLEN 460
Query: 318 ------------------VKRDKFKVR-EKDSCKIHLVPYSEHSNYEELREYVRFLKPKK 358
V+ D +R D + PYSEHS++ +L + +
Sbjct: 461 RAQLSSSLDSIISRPPKFVEYDLRAIRGSTDKVAAFVAPYSEHSSFYDLTMFCLSMNIGH 520
Query: 359 VVPTVGLDVEKSDSK 373
++PTV + ++S K
Sbjct: 521 IIPTVNVGSQRSREK 535
>DNLI_ACIAM (Q02093) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 600
Score = 152 bits (384), Expect = 6e-36
Identities = 119/385 (30%), Positives = 194/385 (49%), Gaps = 42/385 (10%)
Query: 784 LARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLP-AVYLCTNKIAADHENV-ELNI 841
+A F LE +++ TS+L ++F+ + ++V+ VY+ K+ D + EL I
Sbjct: 6 IAEYFDRLEKISSRLQLTSLLADLFKK----TDKNVIDKVVYIIQGKLWPDFLGMPELGI 61
Query: 842 GGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQR---LLA------PPTPLL 892
G + AL A + +I++MY +GDLG VA + +Q Q+ +LA PL
Sbjct: 62 GEKFLIRALSIATSVSDDEIEKMYKSVGDLGQVAFDIKQKQQSASILAFLGAQKASKPLT 121
Query: 893 IKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVL 952
++ +Y L K++ TG GS K ++ L++ E K+LVR + LR+G T+L
Sbjct: 122 VEKVYDDLAKVATSTGEGSRDIKIRLLAGLLKDASPLEAKYLVRFVDGRLRVGIGDATIL 181
Query: 953 PALAHAVVMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFS 1012
ALA G +N + ++ AYN+ +L I L N GIE
Sbjct: 182 DALAITF-----------GGGQNFRPIVE-------RAYNLRADLGNIAKILANGGIE-Q 222
Query: 1013 VSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFS 1072
+ ++ PGIPI+PMLA+ + + L N A +YKYDG+R QIHK D + +FS
Sbjct: 223 LKNIKPQPGIPIRPMLAERLSDPAEMLSKVGNIALV-DYKYDGERGQIHKAGD-KIFIFS 280
Query: 1073 RNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKD 1132
R + T+++PD+ + I + K + FI++ E++ +D + G + FQEL R R
Sbjct: 281 RRLENITNQYPDVAEYISKYVK--GNEFIVEGEIIPVDPETG-EMRPFQELMHRKRKSDI 337
Query: 1133 TLVTKESIKVGICIFVFDIMFANGE 1157
KE + +F+FD+M+ GE
Sbjct: 338 HEAIKE---YPVNVFLFDLMYYEGE 359
>DNLI_SULSO (Q980T8) Thermostable DNA ligase (EC 6.5.1.1)
(Polydeoxyribonucleotide synthase [ATP])
Length = 601
Score = 150 bits (378), Expect = 3e-35
Identities = 118/380 (31%), Positives = 187/380 (49%), Gaps = 41/380 (10%)
Query: 784 LARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLP-AVYLCTNKIAADHENV-ELNI 841
+A F LE +++ T++L + LL S + ++ VY+ K+ D EL I
Sbjct: 6 IAEYFDKLEKISSRLQLTALLAD----LLSKSDKTIIDKVVYIIQGKLWPDFLGYPELGI 61
Query: 842 GGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQRLLA--------PPTPLLI 893
G + A+ A T+ ++ +Y +GDLG+VA+ + Q+ L +
Sbjct: 62 GEKFLIKAISIATNTDENSVENLYKTIGDLGEVARRLKSKQQSTGILGFLGTTSKESLTV 121
Query: 894 KDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLP 953
++YS L K+++ TG GS K ++ L++ E KFLVR + LR+G TVL
Sbjct: 122 DEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATVLD 181
Query: 954 ALAHAVVMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSV 1013
A+A A Q S + AYN+ +L I ++ KGIE ++
Sbjct: 182 AMAIAF------------------GGGQSASEIIERAYNLRADLGNIAKIIVEKGIE-AL 222
Query: 1014 SSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSR 1073
+L GIPI+PMLA+ + + LK A +YKYDG+RAQIHK D + +FSR
Sbjct: 223 KTLKPQVGIPIRPMLAERLSNPEEILKKMGGNAIV-DYKYDGERAQIHKKED-KIFIFSR 280
Query: 1074 NGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDT 1133
+ TS++PD+VD + + + FII+ E+V ID ++G + FQEL R R
Sbjct: 281 RLENITSQYPDVVDYVSKYIE--GKEFIIEGEIVAIDPESG-EMRPFQELMHRKRKSDIY 337
Query: 1134 LVTKESIKVGICIFVFDIMF 1153
KE + +F+FD+M+
Sbjct: 338 EAIKE---YPVNVFLFDLMY 354
>DNLI_SULSH (Q9P9K9) Thermostable DNA ligase (EC 6.5.1.1)
(Polydeoxyribonucleotide synthase [ATP])
Length = 601
Score = 148 bits (374), Expect = 9e-35
Identities = 118/380 (31%), Positives = 188/380 (49%), Gaps = 41/380 (10%)
Query: 784 LARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLP-AVYLCTNKIAADHENV-ELNI 841
+A F LE +++ T++L + LL S + ++ VY+ K+ D EL I
Sbjct: 6 IAEYFDKLEKISSRLQLTALLAD----LLSKSDKAIIDKVVYIIQGKLWPDFLGYPELGI 61
Query: 842 GGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQRLL--------APPTPLLI 893
G + A+ A T+ ++ +Y GDLG+VA+ + Q+ + L +
Sbjct: 62 GEKFLIKAISIATNTDENSVENLYKSTGDLGEVARRLKSKQQSTGILGFLGTSSKESLTV 121
Query: 894 KDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLP 953
++YS L K+++ TG GS K ++ L++ E KFLVR + LR+G TVL
Sbjct: 122 DEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATVLD 181
Query: 954 ALAHAVVMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSV 1013
A+A A Q S V AYN+ +L I ++ KGIE ++
Sbjct: 182 AMAIAF------------------GGGQSASEIVERAYNLRADLGNIAKIIVEKGIE-AL 222
Query: 1014 SSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSR 1073
+L GIPI+PMLA+ + + LK A +YKYDG+RAQIHK D + +FSR
Sbjct: 223 KTLKPEVGIPIRPMLAERLSNPEEILKKVGGSALV-DYKYDGERAQIHKKSD-KIFIFSR 280
Query: 1074 NGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDT 1133
+ TS++PD+V+ I + + FII+ E+V +D ++G + +FQEL R R
Sbjct: 281 RLENITSQYPDVVEYISKYVE--GKEFIIEGEIVAVDPESG-EMRAFQELMHRKRKSDIY 337
Query: 1134 LVTKESIKVGICIFVFDIMF 1153
KE + +F+FD+M+
Sbjct: 338 EAIKE---YPVNVFLFDLMY 354
>DNLI_THEVO (Q979A1) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 588
Score = 147 bits (372), Expect = 2e-34
Identities = 116/378 (30%), Positives = 186/378 (48%), Gaps = 33/378 (8%)
Query: 788 FSLLEDEKGKIKATSI---LCNMFRSLLVLSPEDVLPAVYLCTNKIAADHENVELNIGGS 844
FSL+ D K+ T+ L + LL + ED+ VYL K+A D++ +E +
Sbjct: 3 FSLVTDAFEKMSKTTKRTELTEILVELLKSADEDLQSLVYLIEGKLAPDYQGIETQMSDK 62
Query: 845 LVTTALEEACGTNRLKIKEMYNKLGDLGDVAQE--CRQTQRLLAPPTPLLIKDIYSALRK 902
L+ AL + E Y+KLGD+G VA+E ++ R L L +K ++ L +
Sbjct: 63 LIIKALSIVSNIPEEAVSETYSKLGDIGSVAREIAAKKNMRSLV-NEDLTVKYVHDTLMR 121
Query: 903 ISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVVMN 962
++ +G+GST + + L S ++ ++ R + LRIG T+L A+
Sbjct: 122 MAKTSGSGSTKARIDAYVDLALSGTPADLMYITRIITGKLRIGVSDATILDAII------ 175
Query: 963 SRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSLSMVPGI 1022
L + + S + AYN P+L I L +E SV ++ P +
Sbjct: 176 -------------LAFSDEKYSEEIENAYNFHPDLGYIAVQLRLGNLE-SVINMGPTPMV 221
Query: 1023 PIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSRNGDESTSRF 1082
P K MLA+ + + ++ K EYKYDG R +IH +VD V +FSR +E+T +F
Sbjct: 222 PFKVMLAERLRSVDEIVQKMNGKC-AFEYKYDGMRTEIH-IVDEKVRLFSRGNEETTGQF 279
Query: 1083 PDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDTLVTKESIKV 1142
PD+V KE+ S+ I+D E V + + G + FQ +S R RG K L K S ++
Sbjct: 280 PDIVKSAKETFH--VSSVILDGEAVPYNPETG-ELYPFQVISQR-RGRKYDL-DKVSNEI 334
Query: 1143 GICIFVFDIMFANGEHLA 1160
I +F+FDI++ NG+ L+
Sbjct: 335 PITVFLFDIVYINGKDLS 352
>DNLI_PYRAE (O93723) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 584
Score = 147 bits (372), Expect = 2e-34
Identities = 110/388 (28%), Positives = 187/388 (47%), Gaps = 41/388 (10%)
Query: 784 LARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLPAVYLCTNKIAADHENVELNIGG 843
L + + +E + +L ++F+ SPE+V VY + E VEL +
Sbjct: 6 LVKALAAIEATTQRTTMVKLLVSLFKKA---SPEEVGKIVYFILGDLRPPWEGVELGVAE 62
Query: 844 SLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQR---LLA--PPTPLLIKDIYS 898
L A+ +A G +++ +Y K GD+G+ A+ + LLA PL + ++Y
Sbjct: 63 KLCLRAVSKATGAAVSELEALYKKTGDVGEAARRALAASKRPGLLAFGSQKPLEVSEVYD 122
Query: 899 ALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHA 958
L K++ TG G+ K ++ L +E K++ R +V LR+G T++ AL+ A
Sbjct: 123 TLLKVARATGEGAQDMKVALLSSLFARATPEEGKYIARFVVGKLRLGVADMTIIEALSDA 182
Query: 959 VVMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSLSM 1018
+N A+ +AY+I P+L + + + + +
Sbjct: 183 YGVNKE---------------------ALEKAYHIYPDLGRLAKHVAEGK---PLDEIRI 218
Query: 1019 VPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSRNGDES 1078
PG+P+ PMLA+ + + L A CEYKYDG+RAQIH L G V +FSR ++
Sbjct: 219 TPGVPVLPMLAQRLSSASEILAKLGGSAI-CEYKYDGERAQIH-LTPGGVKIFSRRLEDI 276
Query: 1079 TSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDTLVTKE 1138
T +PD+V +KE+ A I++ E+V +D G ++ FQEL R R K + T
Sbjct: 277 THAYPDVVKAVKEAVS--AKEAILEGEIVAVDPDTG-DMLPFQELMHRKR--KHDVATAV 331
Query: 1139 SIKVGICIFVFDIMFANGEHLA-DPLKY 1165
+ + +++FD+++ +GE L +PL Y
Sbjct: 332 ELYPTV-LYLFDVLYVDGEDLTEEPLIY 358
>DNLI_AQUAE (O67398) Probable DNA ligase (EC 6.5.1.1)
(Polydeoxyribonucleotide synthase [ATP])
Length = 584
Score = 146 bits (368), Expect = 4e-34
Identities = 116/381 (30%), Positives = 185/381 (48%), Gaps = 36/381 (9%)
Query: 781 YLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLP-AVYLCTNKIAADHENVEL 839
Y LA + +E +I+ S L +F+ +P++++ VYL KIA ++ ++
Sbjct: 3 YRILAEFYERIEKTTSRIEMVSSLVELFKQ----TPKELIDKVVYLSIGKIAPEYTGLDY 58
Query: 840 NIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQRLLAPPTPLLIKDIYSA 899
N G L AL L+I++ + GDLG+ ++ + + P L ++++Y+
Sbjct: 59 NFGEKLAIRALSRVLKIPALEIEKRVRQEGDLGEAGRKLYE-ELGFKPEGTLTVEEVYNG 117
Query: 900 LRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAV 959
L I+ G GS RK I L++ E K+L+RT+ LR+G T+L AL+ A
Sbjct: 118 LLNIAKAVGIGSQERKISIFASLLKKATPLEAKYLLRTITERLRLGIGDNTILEALSIAF 177
Query: 960 VMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSLSMV 1019
+S V V AYN+ +L + L KG+E V + +
Sbjct: 178 TGSS------------------VNREVVERAYNLTSDLGYVAKILAEKGLE-GVKQVKIQ 218
Query: 1020 PGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSRNGDEST 1079
G P++PMLA+ + L+ K EYKYDG+R Q H+ D +FSR + T
Sbjct: 219 VGRPVRPMLAERMSSPILILRKLGGKC-GAEYKYDGERIQAHRKGD-EFYLFSRRLENIT 276
Query: 1080 SRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDTLVTKES 1139
++PDL++ +KE+ + FI++ E V ID +G I FQEL R K VTK
Sbjct: 277 HQYPDLIEFLKEA---IPHDFIVELEAVVIDPASG-EIRPFQELMHR----KVKYVTKYH 328
Query: 1140 I-KVGICIFVFDIMFANGEHL 1159
I K + F+FDI++ +GE L
Sbjct: 329 ITKYPVAGFLFDIIYLDGEDL 349
>DNLI_AERPE (Q9YD18) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 602
Score = 144 bits (363), Expect = 2e-33
Identities = 113/393 (28%), Positives = 188/393 (47%), Gaps = 43/393 (10%)
Query: 780 PYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLPAVYLCTNKIAADHENV-E 838
P+ +A F+ +E + + T +L +F+S P + VYL K+ D + + E
Sbjct: 2 PFKPVAEAFASMERITSRTQLTLLLTRLFKST---PPGAIGIVVYLIQGKLGPDWKGLPE 58
Query: 839 LNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQRLLAPPT--------- 889
L +G L+ A+ A +++ +Y +GDLG VA+ + R A
Sbjct: 59 LGVGEKLLVKAIALAYKATEERVERLYKSVGDLGSVAERLSREYRSRAARAVTLEAFMAG 118
Query: 890 ---PLLIKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGA 946
L ++ +Y+ L +I++ G GS K ++ L+ E K++VR + LR+G
Sbjct: 119 GGEALTVRRVYNTLYRIAMAQGEGSRDIKLRLLAGLLADAEPVEAKYIVRFVEGRLRVGV 178
Query: 947 MLRTVLPALAHAVVMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMN 1006
TVL ALA A G + + ++ AYN+ +L I +
Sbjct: 179 GDATVLDALAMAF-----------GGGAHARPVIE-------RAYNLRADLGYIAEVVAR 220
Query: 1007 KGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDG 1066
+G++ ++ + G+PI+PMLA+ + L+ +A EYKYDG+RAQIHK DG
Sbjct: 221 EGVD-ALRGVKPQVGVPIRPMLAERGRDPAEILRKVGGRA-VVEYKYDGERAQIHK-KDG 277
Query: 1067 SVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSR 1126
V ++SR + T FPD+V+M ++ K A I++ E+V +D N I FQ L R
Sbjct: 278 EVYIYSRRLENITRMFPDVVEMARKGLK--AGEAIVEGEIVAVDPDN-YEIQPFQVLMQR 334
Query: 1127 GRGGKDTLVTKESIKVGICIFVFDIMFANGEHL 1159
R V +E V + +F+FD ++ +GE L
Sbjct: 335 KRKHDIHRVMRE---VPVAVFLFDALYVDGEDL 364
>DNLI_THEAC (Q9HJ26) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 588
Score = 142 bits (359), Expect = 5e-33
Identities = 108/378 (28%), Positives = 184/378 (48%), Gaps = 32/378 (8%)
Query: 784 LARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLPAVYLCTNKIAADHENVELNIGG 843
+A F +E +++ T +L N+ + + +D+ +YL K+ D+ +E +
Sbjct: 6 VADAFEKMESTTKRLELTDLLVNLLKE----ADDDLPLLIYLLEGKLGPDYLGIETQMSD 61
Query: 844 SLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQRLLA-PPTPLLIKDIYSALRK 902
L+ AL A + +I + Y K GD+G +A+E + + L + + +K I+ L K
Sbjct: 62 KLIIKALSVASNISEDEIAKEYAKAGDIGTIAKEIAEKRSLRSLVQEEMTVKYIHDTLMK 121
Query: 903 ISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVVMN 962
++ TG+GST + + L + KE+ ++ R + LRIG T+L A+ A
Sbjct: 122 MARTTGSGSTKARVDAYMDLFLNSTPKEIMYITRIITGKLRIGISDATILDAIVKAFA-- 179
Query: 963 SRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSLSMVPGI 1022
+E +E+++ A+N P+L I L I+ ++ L P I
Sbjct: 180 ------DEKYSEDIE-----------NAFNFHPDLGYIASELRKGNID-AILKLGPTPMI 221
Query: 1023 PIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSRNGDESTSRF 1082
P K MLA+ + + L+ + EYKYDG R + H + G V +FSR +E+T++F
Sbjct: 222 PFKVMLAERLRSVEEILEKMGGRC-AFEYKYDGMRTETH-IERGKVRLFSRGNEETTNQF 279
Query: 1083 PDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDTLVTKESIKV 1142
PD+ E+ K + I+D E V D G + FQ +S R RG K L K S ++
Sbjct: 280 PDITKAASETFK--VDSAILDGEAVPYDPDTG-ELYPFQVISHR-RGRKYDL-DKVSSEI 334
Query: 1143 GICIFVFDIMFANGEHLA 1160
I +F+FDI++ NG L+
Sbjct: 335 PITVFLFDIVYLNGRDLS 352
>DNLI_METKA (Q8TWN3) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 559
Score = 134 bits (336), Expect = 2e-30
Identities = 113/386 (29%), Positives = 180/386 (46%), Gaps = 40/386 (10%)
Query: 781 YLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLPAVYL-CTNKIAADHENVEL 839
Y LA F LE + S++ R PEDV+ V L N++ + +L
Sbjct: 3 YSSLAEAFERLERISSRKAKISLIAQFLRQC----PEDVVDTVALFLANQVFPGWDPRDL 58
Query: 840 NIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQEC---RQTQRLLAPPTPLLIKDI 896
IG L+ + A G+ ++ E++ +LGDLG A+E R+T LL PL++ ++
Sbjct: 59 GIGSKLMRKVIATATGSTDSEVTELFKRLGDLGLTAEELLKRRKTSTLL-DSRPLMVGEV 117
Query: 897 YSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALA 956
KI+ G G+ RK +++ L+ + KE ++LVR + LR G TV A+A
Sbjct: 118 RETFEKIAEVEGEGAVKRKMRLMMGLLARAKPKEARYLVRQALSELRTGVRESTVEEAIA 177
Query: 957 HAVVMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSL 1016
A G + L V A+ + +L ++ M KG E + +
Sbjct: 178 QAF-----------GVSRKL----------VERAHMLSNDLGLVAKVAMTKG-EEGLREI 215
Query: 1017 SMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDG-SVLVFSRNG 1075
+ P PIKPMLA+ + +AL K E K DG R Q+H DG V V++R
Sbjct: 216 DLRPMRPIKPMLAQAARNVKEALAEVGGKG-AVEIKLDGARVQVHS--DGEEVRVYTRRI 272
Query: 1076 DESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDTLV 1135
++ T PD+V+ +K+ A FI++ E V I+ + G + FQEL R + D
Sbjct: 273 EDVTHALPDIVEAVKDCVD--ADEFILEGEAVAINPETG-KPRPFQELLHRIKRKYDIEE 329
Query: 1136 TKESIKVGICIFVFDIMFANGEHLAD 1161
++ I V + +FD ++ +GE L D
Sbjct: 330 VRKEIPVE--LHLFDCLYVDGESLVD 353
>DNLI_SULTO (Q976G4) Thermostable DNA ligase (EC 6.5.1.1)
(Polydeoxyribonucleotide synthase [ATP])
Length = 600
Score = 127 bits (320), Expect = 2e-28
Identities = 106/391 (27%), Positives = 189/391 (48%), Gaps = 42/391 (10%)
Query: 784 LARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLP-AVYLCTNKIAADHENV-ELNI 841
+A F LE +++ T++L ++F+ + ++V+ VYL K+ D EL +
Sbjct: 6 IAEYFDKLEKISSRLQLTALLTDLFKK----ADKNVIDKVVYLIQGKLWPDFLGYPELGV 61
Query: 842 GGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQTQRLLA--------PPTPLLI 893
G L+ A+ A ++E +GDLG+VA ++T + + L +
Sbjct: 62 GEKLLIKAISIAVNVKEEVVEEQLKVVGDLGEVAMRLKKTPQSASILSFLGAQSNEGLTV 121
Query: 894 KDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLP 953
++ Y +L KI++ +G GS K + L++ E K++VR + LR+G
Sbjct: 122 EETYESLTKIALASGEGSRDIKIRSLAGLLKKASPLEAKYIVRFVDGRLRVG-------- 173
Query: 954 ALAHAVVMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSV 1013
+ A +M++ T + T+ + AYN+ +L I + +G+E ++
Sbjct: 174 -IGDATIMDALSTAFTGSTS---------FRPLIERAYNLRADLGNIAKIIAQQGVE-AL 222
Query: 1014 SSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSR 1073
+ GIPI+PMLA+ + + L +A +YKYDG+RAQIHK D V +FSR
Sbjct: 223 KDIKPQVGIPIRPMLAERMSDPAEILAKVGGEALV-DYKYDGERAQIHK-KDKEVYIFSR 280
Query: 1074 NGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDT 1133
+ T +PD+V+ ++E A+ II+ E+V +D ++ I FQEL R R
Sbjct: 281 RLENITRMYPDVVEYVREYIN--ANEVIIEGEIVAVDPESN-EIRPFQELMHRKRKNDIN 337
Query: 1134 LVTKESIKVGICIFVFDIM-FANGEHLADPL 1163
KE + +++FD+M + + ++ PL
Sbjct: 338 EAIKE---YPVNVYLFDLMLYEDADYTMKPL 365
>DNLI_METTF (P54875) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide
synthase [ATP])
Length = 557
Score = 123 bits (308), Expect = 4e-27
Identities = 101/386 (26%), Positives = 195/386 (50%), Gaps = 40/386 (10%)
Query: 781 YLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLPAV-YLCTNKIAADHENVEL 839
Y+ LA + LE +++ T IL + RS+ +++LP V L ++ EL
Sbjct: 6 YMELAEVYHRLESTTKRLEKTEILAELLRSV----DKELLPDVTILMLGRVFPIWSEEEL 61
Query: 840 NIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQEC--RQTQRLLAPPTPLLIKDIY 897
+G L+ A+ G + +I++ + GD+G +++ R+TQ PL ++ +Y
Sbjct: 62 GVGIKLLMKAISLVVGVSMDEIEDEIREQGDIGLASEKLFSRKTQTTFFSQ-PLTVEFVY 120
Query: 898 SALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAH 957
S L+ ++ +G+ + +K I++ ++ + E +++ RT++ LR+G + A+A
Sbjct: 121 SRLKALASASGDRAQSKKINILVEVLSQAKPLEARYITRTVLEELRVGVAEGIIRDAIAR 180
Query: 958 AVVMNSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNLDIIVPTLMNKGIEFSVSSLS 1017
A ++ A+VE ++L N +V + + E + L+
Sbjct: 181 AFEVDP----------------------ALVERAHMLTNDLGMVAAVAREEGEPGLGRLN 218
Query: 1018 MVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVLVFSRNGDE 1077
+ PG P+KPMLA++ + I A+ +AF CE KYDG R QIH+ D V +F+R +
Sbjct: 219 LEPGRPVKPMLAQLASSIESAITEL-GRAF-CETKYDGIRVQIHRCGD-EVSIFTRRLEN 275
Query: 1078 STSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRIMSFQELSSRGRGGKDTLVTK 1137
T+ P++++ ++E+ A +I++ E+ I +G R SFQ + R R D V +
Sbjct: 276 ITAAVPEILEGVEEALP--ADDYIVEGEI--IVTMDG-RPASFQYILQRVRRKYD--VDR 328
Query: 1138 ESIKVGICIFVFDIMFANGEHLADPL 1163
+ +V + +F+FD+++ G + +PL
Sbjct: 329 LTREVPLSLFLFDVLYHRGPLIDEPL 354
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.327 0.140 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,870,272
Number of Sequences: 164201
Number of extensions: 7027104
Number of successful extensions: 26054
Number of sequences better than 10.0: 198
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 25579
Number of HSP's gapped (non-prelim): 419
length of query: 1419
length of database: 59,974,054
effective HSP length: 123
effective length of query: 1296
effective length of database: 39,777,331
effective search space: 51551420976
effective search space used: 51551420976
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 72 (32.3 bits)
Medicago: description of AC144375.6