Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144345.16 + phase: 0 /pseudo/partial
         (221 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

7LES_DROVI (P20806) Sevenless protein (EC 2.7.1.112)                   30  5.8
KPSH_HUMAN (P11801) Serine/threonine-protein kinase H1 (EC 2.7.1...    29  7.6

>7LES_DROVI (P20806) Sevenless protein (EC 2.7.1.112)
          Length = 2594

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 1/77 (1%)

Query: 57   WEPVLRKPSGMELLCLRKLNLLQVRRRGMVMDTTRRKKLKWGWCQLEQVNQWLLLLLSMQ 116
            W P L   S + L  L  L   +  RR      T    L W    L   +QWL    + +
Sbjct: 2032 WTPALDNGSPILLYNLEALQARRTNRRRRRRRETTLSLLPWAEEPLVIEDQWLDFCNTTE 2091

Query: 117  LKCL-RHTHICRILSIR 132
            L C+ R  H  R+L  R
Sbjct: 2092 LSCIVRELHTRRLLLFR 2108


>KPSH_HUMAN (P11801) Serine/threonine-protein kinase H1 (EC
           2.7.1.37) (PSK-H1)
          Length = 424

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 22/73 (30%), Positives = 38/73 (51%), Gaps = 7/73 (9%)

Query: 117 LKCLRHTHICRIL---SIRSSHRFIISTLCRRASLKCPSMR--LPNR*NNRCRFNNNNKI 171
           L+ LRH  +  +    S+++ HR I   L +RAS +C S +     R +   R N + ++
Sbjct: 347 LQALRHPWVVSMAASSSMKNLHRSISQNLLKRASSRCQSTKSAQSTRSSRSTRSNKSRRV 406

Query: 172 SKLGL--LSLRYR 182
            +  L  L+LRY+
Sbjct: 407 RERELRELNLRYQ 419


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.343    0.149    0.500 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,377,611
Number of Sequences: 164201
Number of extensions: 761805
Number of successful extensions: 2388
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2387
Number of HSP's gapped (non-prelim): 3
length of query: 221
length of database: 59,974,054
effective HSP length: 106
effective length of query: 115
effective length of database: 42,568,748
effective search space: 4895406020
effective search space used: 4895406020
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 63 (28.9 bits)


Medicago: description of AC144345.16