
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144345.16 + phase: 0 /pseudo/partial
(221 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
7LES_DROVI (P20806) Sevenless protein (EC 2.7.1.112) 30 5.8
KPSH_HUMAN (P11801) Serine/threonine-protein kinase H1 (EC 2.7.1... 29 7.6
>7LES_DROVI (P20806) Sevenless protein (EC 2.7.1.112)
Length = 2594
Score = 29.6 bits (65), Expect = 5.8
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 57 WEPVLRKPSGMELLCLRKLNLLQVRRRGMVMDTTRRKKLKWGWCQLEQVNQWLLLLLSMQ 116
W P L S + L L L + RR T L W L +QWL + +
Sbjct: 2032 WTPALDNGSPILLYNLEALQARRTNRRRRRRRETTLSLLPWAEEPLVIEDQWLDFCNTTE 2091
Query: 117 LKCL-RHTHICRILSIR 132
L C+ R H R+L R
Sbjct: 2092 LSCIVRELHTRRLLLFR 2108
>KPSH_HUMAN (P11801) Serine/threonine-protein kinase H1 (EC
2.7.1.37) (PSK-H1)
Length = 424
Score = 29.3 bits (64), Expect = 7.6
Identities = 22/73 (30%), Positives = 38/73 (51%), Gaps = 7/73 (9%)
Query: 117 LKCLRHTHICRIL---SIRSSHRFIISTLCRRASLKCPSMR--LPNR*NNRCRFNNNNKI 171
L+ LRH + + S+++ HR I L +RAS +C S + R + R N + ++
Sbjct: 347 LQALRHPWVVSMAASSSMKNLHRSISQNLLKRASSRCQSTKSAQSTRSSRSTRSNKSRRV 406
Query: 172 SKLGL--LSLRYR 182
+ L L+LRY+
Sbjct: 407 RERELRELNLRYQ 419
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.343 0.149 0.500
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,377,611
Number of Sequences: 164201
Number of extensions: 761805
Number of successful extensions: 2388
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2387
Number of HSP's gapped (non-prelim): 3
length of query: 221
length of database: 59,974,054
effective HSP length: 106
effective length of query: 115
effective length of database: 42,568,748
effective search space: 4895406020
effective search space used: 4895406020
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 63 (28.9 bits)
Medicago: description of AC144345.16