BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144345.13 + phase: 0
(471 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EVPL_HUMAN (Q92817) Envoplakin (210 kDa paraneoplastic pemphigus... 37 0.11
SYA_AQUPY (Q9XDM3) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 36 0.24
MUS2_AQUAE (O67287) MutS2 protein 33 1.2
TPM_DERPT (O18416) Tropomyosin (Allergen Der p 10) 32 3.5
MYSP_SARSC (Q9BMM8) Paramyosin 32 4.6
CENF_HUMAN (P49454) CENP-F kinetochore protein (Centromere prote... 32 4.6
VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B) 31 6.0
KTN1_CHICK (Q90631) Kinectin 31 6.0
KFC2_MOUSE (O08672) Kinesin-like protein KIFC2 31 6.0
TPM2_SCHMA (P42638) Tropomyosin 2 (TMII) 31 7.9
TORS_ECO57 (P58356) Sensor protein torS (EC 2.7.3.-) 31 7.9
IDER_MYCTU (Q50495) Iron-dependent repressor ideR 31 7.9
GOA3_MOUSE (P55937) Golgi autoantigen, golgin subfamily A member... 31 7.9
GABB_HUMAN (Q06547) GA binding protein beta chain (GABP-beta-2 s... 31 7.9
EVPL_MOUSE (Q9D952) Envoplakin (p210) (210 kDa cornified envelop... 31 7.9
>EVPL_HUMAN (Q92817) Envoplakin (210 kDa paraneoplastic pemphigus
antigen) (p210) (210 kDa cornified envelope precursor)
Length = 2033
Score = 37.0 bits (84), Expect = 0.11
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 390 QERLAQSECVGATWKRKYDEAMLKMETMSGEIEQQEHEVHKLRRQIVKKNVQIRAQSTRL 449
+ER+ ++E +G TW R+ E + E + + E+ L RQ ++ +Q++ +S L
Sbjct: 1561 RERIDRAETLGRTWSREESELQRARDQADQECGRLQQELRALERQKQQQTLQLQEESKLL 1620
Query: 450 SQ 451
SQ
Sbjct: 1621 SQ 1622
>SYA_AQUPY (Q9XDM3) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 871
Score = 35.8 bits (81), Expect = 0.24
Identities = 15/43 (34%), Positives = 29/43 (66%)
Query: 406 KYDEAMLKMETMSGEIEQQEHEVHKLRRQIVKKNVQIRAQSTR 448
K DE + K+E + EI+++E E+ KLR++I+K ++ + + R
Sbjct: 719 KEDEVVQKVEELKEEIKEKEKEIQKLRQEILKLQIREKVKEER 761
>MUS2_AQUAE (O67287) MutS2 protein
Length = 762
Score = 33.5 bits (75), Expect = 1.2
Identities = 16/60 (26%), Positives = 35/60 (57%)
Query: 375 PAPALPLAPATVEECQERLAQSECVGATWKRKYDEAMLKMETMSGEIEQQEHEVHKLRRQ 434
P+ + +A V E E+ ++ + + +KY+E K+E + E+++++ EV KLR++
Sbjct: 495 PSEVIEIAKRHVGEFGEQYIKAMEKLSDYVKKYEEEFRKLEELRKELQKEKEEVEKLRKE 554
>TPM_DERPT (O18416) Tropomyosin (Allergen Der p 10)
Length = 284
Score = 32.0 bits (71), Expect = 3.5
Identities = 17/81 (20%), Positives = 37/81 (44%)
Query: 386 VEECQERLAQSECVGATWKRKYDEAMLKMETMSGEIEQQEHEVHKLRRQIVKKNVQIRAQ 445
+E + +L ++ + RKYDE K+ + ++E+ E +IV+ ++R
Sbjct: 141 MEGLENQLKEARMMAEDADRKYDEVARKLAMVEADLERAEERAETGESKIVELEEELRVV 200
Query: 446 STRLSQFISAGERWEFFKDAH 466
L + E+ + ++AH
Sbjct: 201 GNNLKSLEVSEEKAQQREEAH 221
>MYSP_SARSC (Q9BMM8) Paramyosin
Length = 876
Score = 31.6 bits (70), Expect = 4.6
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 22/100 (22%)
Query: 384 ATVEECQERLAQ-------SECVGATWKRKYDEAMLKMETMSGE-------IEQQEHEVH 429
A ++E Q++L Q S+ ++ + E + ++ET + E +E+ E+ VH
Sbjct: 122 AAIQEMQDQLDQVQKAKNKSDKEKQKFQAEVFELLAQLETANKEKLTAMKTVEKLEYTVH 181
Query: 430 KLRRQIVKKN---VQIRAQSTRLSQFISAGERWEFFKDAH 466
+L +I + N +++ +Q TRLSQ E E K+ H
Sbjct: 182 ELNIKIEEINRTVIELTSQKTRLSQ-----ENTELIKEVH 216
>CENF_HUMAN (P49454) CENP-F kinetochore protein (Centromere protein F)
(Mitosin) (AH antigen)
Length = 3210
Score = 31.6 bits (70), Expect = 4.6
Identities = 17/62 (27%), Positives = 31/62 (49%)
Query: 387 EECQERLAQSECVGATWKRKYDEAMLKMETMSGEIEQQEHEVHKLRRQIVKKNVQIRAQS 446
E Q RL++S+ + + A+++ + + + EVH+LRR I K V+I A
Sbjct: 2169 ESLQARLSESDYEKLNVSKALEAALVEKGEFALRLSSTQEEVHQLRRGIEKLRVRIEADE 2228
Query: 447 TR 448
+
Sbjct: 2229 KK 2230
>VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B)
Length = 588
Score = 31.2 bits (69), Expect = 6.0
Identities = 20/69 (28%), Positives = 31/69 (43%), Gaps = 5/69 (7%)
Query: 386 VEECQERLAQSECVGATWKRKYDEAMLKMETMSGEIEQQEHEVHKLRRQIVKKNVQIRAQ 445
V EC+ER ++ W+R+ +E + ET GE EQ + H RR + +
Sbjct: 145 VRECRERYQENP-----WRREREEEAEEEETEEGEQEQSHNPFHFHRRSFQSRFREEHGN 199
Query: 446 STRLSQFIS 454
L +F S
Sbjct: 200 FRVLQRFAS 208
>KTN1_CHICK (Q90631) Kinectin
Length = 1364
Score = 31.2 bits (69), Expect = 6.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 384 ATVEECQERLAQS-ECVGATWKRKYDEAMLKMETMSGEIEQQEHEVHKLRRQI 435
A E +RL +S E + WK K +E+ +++ M + EHEV +L+ +I
Sbjct: 1150 AETEGILQRLQRSVEEEESKWKIKVEESQKELKQMRSSVASLEHEVERLKEEI 1202
>KFC2_MOUSE (O08672) Kinesin-like protein KIFC2
Length = 792
Score = 31.2 bits (69), Expect = 6.0
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 371 SSTTPAPALPLAPATVEECQERLA-QSECVGATWKRKYDEAMLKMETMSGEIEQQEHEVH 429
SS+ P P L P +E QE Q E W+R + ++E + ++EQQE E+
Sbjct: 164 SSSQPTPILDEVPR--DETQEHQPLQLEEEQRVWQRLEQLILGQLEELRQQLEQQEEELS 221
Query: 430 KLRRQIVKKNVQIRAQSTRL 449
+LR + + + R Q L
Sbjct: 222 RLRLGVGVTDSEKRVQHLTL 241
>TPM2_SCHMA (P42638) Tropomyosin 2 (TMII)
Length = 284
Score = 30.8 bits (68), Expect = 7.9
Identities = 15/58 (25%), Positives = 29/58 (49%)
Query: 386 VEECQERLAQSECVGATWKRKYDEAMLKMETMSGEIEQQEHEVHKLRRQIVKKNVQIR 443
+ + +E+L +S + RKYDEA K+ E+E+ E + +I + ++R
Sbjct: 141 INQLEEQLKESTFMAEDADRKYDEAARKLAITEVELERAESRLEAAESKITELEEELR 198
>TORS_ECO57 (P58356) Sensor protein torS (EC 2.7.3.-)
Length = 914
Score = 30.8 bits (68), Expect = 7.9
Identities = 18/38 (47%), Positives = 24/38 (62%), Gaps = 3/38 (7%)
Query: 421 IEQQEHEVHKLRRQ---IVKKNVQIRAQSTRLSQFISA 455
IEQQE E+ + RQ +V + +Q+R Q RLSQ I A
Sbjct: 109 IEQQEQEISRSLRQQGELVGRRLQLRQQQQRLSQQIVA 146
>IDER_MYCTU (Q50495) Iron-dependent repressor ideR
Length = 230
Score = 30.8 bits (68), Expect = 7.9
Identities = 24/90 (26%), Positives = 40/90 (43%), Gaps = 1/90 (1%)
Query: 335 RSQLARRSDSLQGSYTQWVINRASDLVLPYHLPRYLSSTTPAPALPLAPATVEECQERLA 394
R+++A R D + +Q V D +L R+L T AL +A ERL
Sbjct: 27 RARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLL 86
Query: 395 QSECVGATWKRKYDEAMLKMETMSGEIEQQ 424
+ +G W+ + EA MS ++E++
Sbjct: 87 -VDVIGLPWEEVHAEACRWEHVMSEDVERR 115
>GOA3_MOUSE (P55937) Golgi autoantigen, golgin subfamily A member 3
(Golgin-160) (Male-enhanced antigen-2) (MEA-2)
Length = 1447
Score = 30.8 bits (68), Expect = 7.9
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 386 VEECQERLAQSECVGATWKRKYDEAMLKMETMSGEIEQQEHEVHKLRRQIVKKNVQIRAQ 445
V +E++A + +R + A L++ + E++ +EH V L+ ++ + +Q
Sbjct: 1144 VNSLKEQMAAARIEAGHNRRHFKAATLELSEVKKELQAKEHLVQTLQAEVDELQIQDGKH 1203
Query: 446 STRLSQF 452
S ++QF
Sbjct: 1204 SQEIAQF 1210
>GABB_HUMAN (Q06547) GA binding protein beta chain (GABP-beta-2
subunit) (GABP-2) (GABP-beta-1 subunit) (GABPB-1)
(Transcription factor E4TF1-53) (Transcription factor
E4TF1-47) (Nuclear respiratory factor-2)
Length = 395
Score = 30.8 bits (68), Expect = 7.9
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 377 PALPLAPATVEECQERLAQSECVGATWKRKYDEAMLKMETMSGEIEQQEHEVHKLRRQIV 436
PA +A TV +E A+ +C+ R + + E + ++++ E K R+Q++
Sbjct: 311 PATDIAEETVIS-EEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANREAQKYRQQLL 369
Query: 437 KKNVQIRAQSTRL 449
KK + A +L
Sbjct: 370 KKEQEAEAYRQKL 382
>EVPL_MOUSE (Q9D952) Envoplakin (p210) (210 kDa cornified envelope
precursor)
Length = 2035
Score = 30.8 bits (68), Expect = 7.9
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 386 VEECQERLAQSECVGATWKRKYDEAMLKMETMSGEIEQQEHEVHKLRRQIVKKNVQIRAQ 445
V QER+ ++E + +W R+ E + S + + + ++ +L +Q +K Q++ +
Sbjct: 1558 VRSLQERIDRAEALRRSWSREEAELQRARDQASQDCGRLQRQLRELEQQKQQKARQLQEE 1617
Query: 446 STRLSQ 451
LSQ
Sbjct: 1618 GRLLSQ 1623
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,525,269
Number of Sequences: 164201
Number of extensions: 2541627
Number of successful extensions: 6181
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6161
Number of HSP's gapped (non-prelim): 26
length of query: 471
length of database: 59,974,054
effective HSP length: 114
effective length of query: 357
effective length of database: 41,255,140
effective search space: 14728084980
effective search space used: 14728084980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC144345.13