BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142506.2 + phase: 1 /partial
(261 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POR1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin (... 230 2e-60
POR6_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein ... 226 4e-59
POR4_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein ... 225 1e-58
POR1_WHEAT (P46274) Outer mitochondrial membrane protein porin (... 223 3e-58
PORI_PEA (P42054) Outer plastidial membrane protein porin (Volta... 222 6e-58
PORI_MAIZE (P42057) Outer plastidial membrane protein porin (Vol... 219 7e-57
POR2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2... 211 1e-54
POR1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1... 204 1e-52
PORI_DROME (Q94920) Voltage-dependent anion-selective channel (P... 82 1e-15
POR2_XENLA (P81004) Voltage-dependent anion-selective channel pr... 70 5e-12
PORI_NEUCR (P07144) Outer mitochondrial membrane protein porin 66 7e-11
POR1_RABIT (Q9TT15) Voltage-dependent anion-selective channel pr... 65 2e-10
POR1_BOVIN (P45879) Voltage-dependent anion-selective channel pr... 65 2e-10
POR1_HUMAN (P21796) Voltage-dependent anion-selective channel pr... 64 3e-10
POR1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel prot... 64 4e-10
POR1_MOUSE (Q60932) Voltage-dependent anion-selective channel pr... 64 4e-10
POR3_RABIT (Q9TT13) Voltage-dependent anion-selective channel pr... 64 5e-10
POR2_MELGA (P82013) Voltage-dependent anion-selective channel pr... 64 5e-10
POR3_HUMAN (Q9Y277) Voltage-dependent anion-selective channel pr... 62 2e-09
POR3_MOUSE (Q60931) Voltage-dependent anion-selective channel pr... 61 2e-09
>POR1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin
(Voltage-dependent anion-selective channel protein)
(VDAC)
Length = 274
Score = 230 bits (587), Expect = 2e-60
Identities = 119/261 (45%), Positives = 174/261 (66%), Gaps = 4/261 (1%)
Query: 1 LLYKDYNFDHKFSLSIPSSTGLGLTATGLKRDKFFVGDLNTLYKSGNVTVDVKVNTDSNV 60
LLY+DY DHKF+L+ +S G+ +TAT K+ G++ + K+ N+TVDVK N+DSNV
Sbjct: 17 LLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNV 76
Query: 61 STKVTLNDVSLSHSKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPAPKLELSAAI 120
T VT+++ L+ K LSF +PD +SGK ++QY H +A + +SIGL +P + LS+
Sbjct: 77 VTTVTVDE--LTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVF 134
Query: 121 GSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDG 180
G+K +++GA+V DT + + + YNAG++F+ D A+L L +KG SL ASY H V+
Sbjct: 135 GTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNH-SA 193
Query: 181 LTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSA 240
V AEL H SS+EN TFGT ++DP TV+K RF++ GKA+ Q WRP S+ T+SA
Sbjct: 194 TAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISA 253
Query: 241 EYDSKKIIGSPAKFGLALSLK 261
E D+K I S +K G+A++LK
Sbjct: 254 EVDTKAIDKS-SKVGIAVALK 273
>POR6_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein
porin (Voltage-dependent anion-selective channel
protein) (VDAC) (POM 36)
Length = 275
Score = 226 bits (576), Expect = 4e-59
Identities = 115/261 (44%), Positives = 171/261 (65%), Gaps = 3/261 (1%)
Query: 1 LLYKDYNFDHKFSLSIPSSTGLGLTATGLKRDKFFVGDLNTLYKSGNVTVDVKVNTDSNV 60
LLY+DY DHKF+++ S+TG+ +TA+GLK+ + F+ D++T K+ N+T DVKV+T+SNV
Sbjct: 17 LLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNV 76
Query: 61 STKVTLNDVSLSHSKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPAPKLELSAAI 120
T +T+++ + K SF +PD KSGK+++QYLH +A I++SIGL +P + S
Sbjct: 77 YTTITVDEPA--PGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVA 134
Query: 121 GSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDG 180
G+ +++G ++ FDT + +F+ NAG++F+ D A+L L DKG ++ ASY H V
Sbjct: 135 GNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTN 194
Query: 181 LTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSA 240
V AEL H SS+EN T GT +DP T +K R + GKA+ Q WRP SL T+S
Sbjct: 195 TAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISG 254
Query: 241 EYDSKKIIGSPAKFGLALSLK 261
E D++ I S AK GLA++LK
Sbjct: 255 EVDTRAIEKS-AKIGLAVALK 274
>POR4_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein
porin (Voltage-dependent anion-selective channel
protein) (VDAC) (POM 34)
Length = 275
Score = 225 bits (573), Expect = 1e-58
Identities = 117/261 (44%), Positives = 167/261 (63%), Gaps = 3/261 (1%)
Query: 1 LLYKDYNFDHKFSLSIPSSTGLGLTATGLKRDKFFVGDLNTLYKSGNVTVDVKVNTDSNV 60
LLYKDY DHKFS++ S TG+ +T++G K+ F+ D+NT K+ NVT D+KV+T+SN+
Sbjct: 17 LLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNL 76
Query: 61 STKVTLNDVSLSHSKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPAPKLELSAAI 120
T +T+++ + K LSF +PD +SGKL+VQYLH +A I +S+GL P + S +
Sbjct: 77 FTTITVDEAA--PGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVV 134
Query: 121 GSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDG 180
G+ I++G +V FDT + F+ NAG++F D A+L L +KG +L ASY H V
Sbjct: 135 GTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTS 194
Query: 181 LTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSA 240
V AE+ H S++EN T GT +DP T +K R ++ GKA+ Q WRP SL T+S
Sbjct: 195 TAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSG 254
Query: 241 EYDSKKIIGSPAKFGLALSLK 261
E D+K + AKFGLAL+LK
Sbjct: 255 EVDTKS-VDKGAKFGLALALK 274
>POR1_WHEAT (P46274) Outer mitochondrial membrane protein porin
(Voltage-dependent anion-selective channel protein)
(VDAC)
Length = 275
Score = 223 bits (569), Expect = 3e-58
Identities = 117/261 (44%), Positives = 173/261 (65%), Gaps = 3/261 (1%)
Query: 1 LLYKDYNFDHKFSLSIPSSTGLGLTATGLKRDKFFVGDLNTLYKSGNVTVDVKVNTDSNV 60
LLY+DY DHKF+L+ ++ G +TAT K+ VG++ + K+ N+TVDVK N+ SNV
Sbjct: 17 LLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNV 76
Query: 61 STKVTLNDVSLSHSKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPAPKLELSAAI 120
T +T +D++ K + LSF +PD KSGK+++QYLH +A I++SIGL P + LS A
Sbjct: 77 ITTITADDLAAPGLKTI-LSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAF 135
Query: 121 GSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDG 180
G+ +++GA+V DT + +F+ YNA +++ D A+L L +KG SL ASY H V++ G
Sbjct: 136 GTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEK-SG 194
Query: 181 LTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSA 240
V AEL H SS+EN TFGT ++DP T++K R ++ GKA+ Q + P SL T+SA
Sbjct: 195 TAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISA 254
Query: 241 EYDSKKIIGSPAKFGLALSLK 261
E D+K I S +K G+A++LK
Sbjct: 255 EVDTKAIEKS-SKVGIAIALK 274
>PORI_PEA (P42054) Outer plastidial membrane protein porin
(Voltage-dependent anion-selective channel protein)
(VDAC)
Length = 275
Score = 222 bits (566), Expect = 6e-58
Identities = 112/261 (42%), Positives = 169/261 (63%), Gaps = 3/261 (1%)
Query: 1 LLYKDYNFDHKFSLSIPSSTGLGLTATGLKRDKFFVGDLNTLYKSGNVTVDVKVNTDSNV 60
LLYKDY+ D KF++S S TG+ +T++G K+ + F+GD+NT K+ N+T D+KV+T+SN+
Sbjct: 17 LLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNL 76
Query: 61 STKVTLNDVSLSHSKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPAPKLELSAAI 120
T +T+N+ + K LSF +P+ SGK+++QYLH +A I SS+GL P + S+ I
Sbjct: 77 FTTITVNEPA--PGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVI 134
Query: 121 GSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDG 180
G+ ++ GA++ FDT + NA + F K D +L L +KG L ASY H ++
Sbjct: 135 GTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSN 194
Query: 181 LTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSA 240
V +++H+ S+ EN FT GT ++DP T +K R ++ GKA+ Q WRP SLIT+S+
Sbjct: 195 TAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISS 254
Query: 241 EYDSKKIIGSPAKFGLALSLK 261
E D+K I S AK GL+L+LK
Sbjct: 255 EVDTKAIEKS-AKIGLSLALK 274
>PORI_MAIZE (P42057) Outer plastidial membrane protein porin
(Voltage-dependent anion-selective channel protein)
(VDAC)
Length = 277
Score = 219 bits (557), Expect = 7e-57
Identities = 110/261 (42%), Positives = 167/261 (63%), Gaps = 2/261 (0%)
Query: 1 LLYKDYNFDHKFSLSIPSSTGLGLTATGLKRDKFFVGDLNTLYKSGNVTVDVKVNTDSNV 60
LLYKDYN KF L+ S G+ +TA G ++++ G+L+T K+ +TVDVK N++S++
Sbjct: 18 LLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDL 77
Query: 61 STKVTLNDVSLSHSKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPAPKLELSAAI 120
T +T+++ K + ++ +PD +SGKL+ QYLH +A +++S+GLN P + LS A
Sbjct: 78 LTTITVDEFGTPGLKSI-INLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAF 136
Query: 121 GSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDG 180
GSK +S+G +V FDT ++ F+ YNA ++ PD A+L L + G +L ASY H V G
Sbjct: 137 GSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSG 196
Query: 181 LTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSA 240
V AEL+H +S +E+ FG+ S+DP T +KTRF++ G A+ Q WRP S +T+S
Sbjct: 197 TAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISG 256
Query: 241 EYDSKKIIGSPAKFGLALSLK 261
+ D+K I S K GL+L LK
Sbjct: 257 DVDTKAIEKS-TKVGLSLVLK 276
>POR2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2
(Voltage-dependent anion-selective channel protein 2)
(VDAC 2)
Length = 273
Score = 211 bits (538), Expect = 1e-54
Identities = 111/261 (42%), Positives = 159/261 (60%), Gaps = 5/261 (1%)
Query: 1 LLYKDYNFDHKFSLSIPSSTGLGLTATGLKRDKFFVGDLNTLYKSGNVTVDVKVNTDSNV 60
LLY+DY D KFS++ SSTG+ +T TG + F+GD+ T K+ N T DVKV+TDS++
Sbjct: 17 LLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSL 76
Query: 61 STKVTLNDVSLSHSKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPAPKLELSAAI 120
T +T ++ + KV + +PDHKSGK +VQY H +A I +S+G P + S +
Sbjct: 77 LTTLTFDEPA--PGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVV 134
Query: 121 GSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDG 180
G+ +S+G +V ++T S +F +NAG F K D +A+L+L DKG+ L ASY V
Sbjct: 135 GTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVS--PS 192
Query: 181 LTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSA 240
V AE++H ++ EN T GT ++DP T +K R ++ G A Q WRP S T+S
Sbjct: 193 TVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSG 252
Query: 241 EYDSKKIIGSPAKFGLALSLK 261
E DSK I S AK G+AL+LK
Sbjct: 253 EVDSKAIDKS-AKVGIALALK 272
>POR1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1
(Voltage-dependent anion-selective channel protein 1)
(VDAC 1)
Length = 275
Score = 204 bits (520), Expect = 1e-52
Identities = 110/261 (42%), Positives = 158/261 (60%), Gaps = 3/261 (1%)
Query: 1 LLYKDYNFDHKFSLSIPSSTGLGLTATGLKRDKFFVGDLNTLYKSGNVTVDVKVNTDSNV 60
LLYKD+N D KFS++ S G+ +T+TG K+ +GD+ + N+T D+KV TDS
Sbjct: 17 LLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTF 76
Query: 61 STKVTLNDVSLSHSKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPAPKLELSAAI 120
T+++ + + SF +PD SGK+++QYLH +A I +S+GL P + S I
Sbjct: 77 LITATVDEAA--PGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVI 134
Query: 121 GSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDG 180
GS +++G +V FDT S +F+ NAG++F K D A+L + DKG L ASY H V+
Sbjct: 135 GSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFN 194
Query: 181 LTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSA 240
V AE++HKLSS ++ T GT S+DP T +K R + G A+ Q W+P S T+S
Sbjct: 195 TAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISG 254
Query: 241 EYDSKKIIGSPAKFGLALSLK 261
E D+K I S AK GLAL+LK
Sbjct: 255 EVDTKSIDKS-AKVGLALALK 274
>PORI_DROME (Q94920) Voltage-dependent anion-selective channel
(Porin protein) (DmVDAC)
Length = 281
Score = 82.4 bits (202), Expect = 1e-15
Identities = 69/267 (25%), Positives = 112/267 (41%), Gaps = 13/267 (4%)
Query: 4 KDYNFD-HKFSLSIPSSTGLGLTATGLKRDKF--FVGDLNTLYKSGN--VTVDVKVNTDS 58
K YNF K L +S+G+ G + G L T YK + +T+ K NTD+
Sbjct: 18 KGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYKVKDYGLTLTEKWNTDN 77
Query: 59 NVSTKVTLNDVSLSHSKKVALSFNIPD---HKSGKLDVQYLHPHAAIDSSIGLN-PAPKL 114
+ T+V + D L K++L N +K+GK V Y H + DS + ++ P +
Sbjct: 78 TLFTEVAVQD-QLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDLKGPLI 136
Query: 115 ELSAAIGSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHY 174
SA +G + G + FDT + +T N + + DF + D GQ S
Sbjct: 137 NASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVND-GQEFSGSIFQR 195
Query: 175 VDRPDGLTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNS 234
D L V +L+ +S +F G +D ++ + ++ + Q+ R
Sbjct: 196 TS--DKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGV 253
Query: 235 LITLSAEYDSKKIIGSPAKFGLALSLK 261
+TLS D K K G+ L L+
Sbjct: 254 TLTLSTLVDGKNFNAGGHKIGVGLELE 280
>POR2_XENLA (P81004) Voltage-dependent anion-selective channel
protein 2 (Outer mitochondrial membrane protein porin)
Length = 282
Score = 70.1 bits (170), Expect = 5e-12
Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 17/269 (6%)
Query: 4 KDYNFDH-KFSLSIPSSTGLGLTATGLKR-DKFFV-GDLNTLYKSGN--VTVDVKVNTDS 58
K Y F K + S+TG+ T +G D V G L T YK G +T K NTD+
Sbjct: 19 KGYGFGLVKLDVKTKSATGVEFTTSGTSNTDSGKVNGSLETKYKWGEYGLTFTEKWNTDN 78
Query: 59 NVSTKVTLNDVSLSHSKKVALSFNIP-----DHKSGKLDVQYLHPHAAIDSSIGLNPA-P 112
+ T++ + D +K + L+F+ KSGK+ Y + + + + A P
Sbjct: 79 TLGTEIAIED---QIAKGLKLTFDTTFSPNTGKKSGKVKAAYKQEYVNLGCDVDFDFAGP 135
Query: 113 KLELSAAIGSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYI 172
+ SA +G + G ++ FD+ + + N + + DF + D + + Y
Sbjct: 136 AIHGSAVVGYEGWLAGYQMTFDSAKSKLTKNNFAVGYKTGDFQLHTNVNDGSEFAGSIYQ 195
Query: 173 HYVDRPDGLTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRP 232
D+ + A LA ++ RF +D + + ++ + RP
Sbjct: 196 KVSDK---METAVNLAWTSGNNSTRFGIAAKYQLDSHAAISAKVNNSSLVGVGYTQTLRP 252
Query: 233 NSLITLSAEYDSKKIIGSPAKFGLALSLK 261
+TLSA D K I K GL L L+
Sbjct: 253 GVKLTLSALVDGKNINAGGHKLGLGLELE 281
>PORI_NEUCR (P07144) Outer mitochondrial membrane protein porin
Length = 283
Score = 66.2 bits (160), Expect = 7e-11
Identities = 61/268 (22%), Positives = 110/268 (40%), Gaps = 8/268 (2%)
Query: 1 LLYKDYNFDHKFSLSIPSST--GLGLTATGLK-RDKFFVGDLNTLY--KSGNVTVDVKVN 55
LL KD+ ++ + S+T + TG DK G L + K +TV N
Sbjct: 16 LLNKDFYHLAAGTIEVKSNTPNNVAFKVTGKSTHDKVTSGALEGKFTDKPNGLTVTQTWN 75
Query: 56 TDSNVSTKVTLNDVSLSHSKKVALSFNIP--DHKSGKLDVQYLHPHAAIDSSIGLNPAPK 113
T + + TKV + D K + +P + + K ++ + + + L P
Sbjct: 76 TANALETKVEMADNLAKGLKAEGIFSFLPATNARGAKFNLHFKQSNFHGRAFFDLLKGPT 135
Query: 114 LELSAAIGSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIH 173
+ A +G + GA G+D A+ + Y+A + ++ P +SA + D ASY H
Sbjct: 136 ANIDAIVGHEGFLAGASAGYDVQKAAITGYSAAVGYHAPTYSAAITATDNLSVFSASYYH 195
Query: 174 YVDRPDGLTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPN 233
V+ A K ++ T IDP + +K + +D G AA R
Sbjct: 196 KVNSQVEAGSKATWNSKTGNTVG-LEVATKYRIDPVSFVKGKINDRGVAAIAYNVLLREG 254
Query: 234 SLITLSAEYDSKKIIGSPAKFGLALSLK 261
+ + A +D++K+ + K G + + +
Sbjct: 255 VTLGVGASFDTQKLDQATHKVGTSFTFE 282
>POR1_RABIT (Q9TT15) Voltage-dependent anion-selective channel
protein 1 (VDAC-1) (Outer mitochondrial membrane protein
porin 1)
Length = 282
Score = 65.1 bits (157), Expect = 2e-10
Identities = 61/267 (22%), Positives = 104/267 (38%), Gaps = 13/267 (4%)
Query: 4 KDYNFDH-KFSLSIPSSTGLGLTATGLKRDKF--FVGDLNTLYK--SGNVTVDVKVNTDS 58
K Y F K L S GL T++G + G L T Y+ +T K NTD+
Sbjct: 19 KGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRWTEYGLTFTEKWNTDN 78
Query: 59 NVSTKVTLNDVSLSHSKKVALSFNIPDH---KSGKLDVQYLHPHAAIDSSIGLNPA-PKL 114
+ T++T+ D L+ K+ + + K+ K+ Y H + + + A P +
Sbjct: 79 TLGTEITVED-QLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHINLGCDVDFDIAGPSI 137
Query: 115 ELSAAIGSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHY 174
+ +G + G ++ F+T + + N + + +F + D G S
Sbjct: 138 RGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVND-GTEFGGSIYQK 196
Query: 175 VDRPDGLTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNS 234
V++ L A LA +S RF IDP + ++ + +P
Sbjct: 197 VNKK--LETAVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGI 254
Query: 235 LITLSAEYDSKKIIGSPAKFGLALSLK 261
+TLSA D K + K GL L +
Sbjct: 255 KLTLSALLDGKNVNAGGHKLGLGLEFQ 281
>POR1_BOVIN (P45879) Voltage-dependent anion-selective channel
protein 1 (VDAC-1) (Plasmalemmal porin) (Brain-derived
voltage-dependent anion channel 1) (BR1-VDAC)
Length = 282
Score = 65.1 bits (157), Expect = 2e-10
Identities = 61/267 (22%), Positives = 104/267 (38%), Gaps = 13/267 (4%)
Query: 4 KDYNFDH-KFSLSIPSSTGLGLTATGLKRDKF--FVGDLNTLYK--SGNVTVDVKVNTDS 58
K Y F K L S GL T++G + G L T Y+ +T K NTD+
Sbjct: 19 KGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRWTEYGLTFTEKWNTDN 78
Query: 59 NVSTKVTLNDVSLSHSKKVALSFNIPDH---KSGKLDVQYLHPHAAIDSSIGLNPA-PKL 114
+ T++T+ D L+ K+ + + K+ K+ Y H + + + A P +
Sbjct: 79 TLGTEITVED-QLARGLKLTFDSSFSPNTGRKNAKIKTGYKREHINLGCDVDFDIAGPSI 137
Query: 115 ELSAAIGSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHY 174
+ +G + G ++ F+T + + N + + +F + D G S
Sbjct: 138 RGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVND-GTEFGGSIYQK 196
Query: 175 VDRPDGLTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNS 234
V++ L A LA +S RF IDP + ++ + +P
Sbjct: 197 VNKK--LETAVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGI 254
Query: 235 LITLSAEYDSKKIIGSPAKFGLALSLK 261
+TLSA D K + K GL L +
Sbjct: 255 KLTLSALLDGKNVNAGGHKLGLGLEFQ 281
>POR1_HUMAN (P21796) Voltage-dependent anion-selective channel
protein 1 (VDAC-1) (hVDAC1) (Outer mitochondrial
membrane protein porin 1) (Plasmalemmal porin) (Porin
31HL) (Porin 31HM)
Length = 282
Score = 64.3 bits (155), Expect = 3e-10
Identities = 61/267 (22%), Positives = 104/267 (38%), Gaps = 13/267 (4%)
Query: 4 KDYNFDH-KFSLSIPSSTGLGLTATGLKRDKF--FVGDLNTLYK--SGNVTVDVKVNTDS 58
K Y F K L S GL T++G + G L T Y+ +T K NTD+
Sbjct: 19 KGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRWTEYGLTFTEKWNTDN 78
Query: 59 NVSTKVTLNDVSLSHSKKVALSFNIPDH---KSGKLDVQYLHPHAAIDSSIGLNPA-PKL 114
+ T++T+ D L+ K+ + + K+ K+ Y H + + + A P +
Sbjct: 79 TLGTEITVED-QLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHINLGCDMDFDIAGPSI 137
Query: 115 ELSAAIGSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHY 174
+ +G + G ++ F+T + + N + + +F + D G S
Sbjct: 138 RGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVND-GTEFGGSIYQK 196
Query: 175 VDRPDGLTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNS 234
V++ L A LA +S RF IDP + ++ + +P
Sbjct: 197 VNKK--LETAVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGI 254
Query: 235 LITLSAEYDSKKIIGSPAKFGLALSLK 261
+TLSA D K + K GL L +
Sbjct: 255 KLTLSALLDGKNVNAGGHKLGLGLEFQ 281
>POR1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel protein
1 (VDAC-1) (rVDAC1) (Outer mitochondrial membrane
protein porin 1)
Length = 282
Score = 63.9 bits (154), Expect = 4e-10
Identities = 60/267 (22%), Positives = 105/267 (38%), Gaps = 13/267 (4%)
Query: 4 KDYNFDH-KFSLSIPSSTGLGLTATGLKRDKFFV--GDLNTLYK--SGNVTVDVKVNTDS 58
K Y F K L S GL T++G + G L T Y+ +T K NTD+
Sbjct: 19 KGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYRWTEYGLTFTEKWNTDN 78
Query: 59 NVSTKVTLNDVSLSHSKKVALSFNIPDH---KSGKLDVQYLHPHAAIDSSIGLNPA-PKL 114
+ T++T+ D L+ K+ + + K+ K+ Y H + + + A P +
Sbjct: 79 TLGTEITVED-QLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHINLGCDVDFDIAGPSI 137
Query: 115 ELSAAIGSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHY 174
+ +G + G ++ F+T+ + + N + + +F + D G S
Sbjct: 138 RGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTNVND-GTEFGGSIYQK 196
Query: 175 VDRPDGLTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNS 234
V++ L A LA +S RF +DP + ++ + +P
Sbjct: 197 VNKK--LETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSAKVNNSSLIGLGYTQTLKPGI 254
Query: 235 LITLSAEYDSKKIIGSPAKFGLALSLK 261
+TLSA D K + K GL L +
Sbjct: 255 KLTLSALLDGKNVNAGGHKLGLGLEFQ 281
>POR1_MOUSE (Q60932) Voltage-dependent anion-selective channel
protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer
mitochondrial membrane protein porin 1) (Plasmalemmal
porin)
Length = 296
Score = 63.9 bits (154), Expect = 4e-10
Identities = 60/267 (22%), Positives = 105/267 (38%), Gaps = 13/267 (4%)
Query: 4 KDYNFDH-KFSLSIPSSTGLGLTATGLKRDKFFV--GDLNTLYK--SGNVTVDVKVNTDS 58
K Y F K L S GL T++G + G L T Y+ +T K NTD+
Sbjct: 33 KGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYRWTEYGLTFTEKWNTDN 92
Query: 59 NVSTKVTLNDVSLSHSKKVALSFNIPDH---KSGKLDVQYLHPHAAIDSSIGLNPA-PKL 114
+ T++T+ D L+ K+ + + K+ K+ Y H + + + A P +
Sbjct: 93 TLGTEITVED-QLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHINLGCDVDFDIAGPSI 151
Query: 115 ELSAAIGSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHY 174
+ +G + G ++ F+T+ + + N + + +F + D G S
Sbjct: 152 RGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTNVND-GTEFGGSIYQK 210
Query: 175 VDRPDGLTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNS 234
V++ L A LA +S RF +DP + ++ + +P
Sbjct: 211 VNKK--LETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSAKVNNSSLIGLGYTQTLKPGI 268
Query: 235 LITLSAEYDSKKIIGSPAKFGLALSLK 261
+TLSA D K + K GL L +
Sbjct: 269 KLTLSALLDGKNVNAGGHKLGLGLEFQ 295
>POR3_RABIT (Q9TT13) Voltage-dependent anion-selective channel
protein 3 (VDAC-3) (Outer mitochondrial membrane protein
porin 3)
Length = 283
Score = 63.5 bits (153), Expect = 5e-10
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 13/249 (5%)
Query: 18 SSTGLGLTATGLKRDKFFVGDLNTLYKSGN--VTVDVKVNTDSNVSTKVTLNDVSLSHSK 75
S++G T TG G+L T YK N +T K NTD+ + T+++L + K
Sbjct: 42 STSGHAYTDTGKAS-----GNLETKYKVCNYGLTFTQKWNTDNTLGTEISLENKLAEGLK 96
Query: 76 KVALSFNIPD--HKSGKLDVQYLHPHAAIDSSIGLN-PAPKLELSAAIGSKDISMGAEVG 132
+ +P+ KSGKL Y ++ S++ ++ P + A + + G ++
Sbjct: 97 LTLDTIFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMS 156
Query: 133 FDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDGLTVAAELAHKLS 192
FDT + S N + + DF + D G S V+ + + + LA
Sbjct: 157 FDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSIYQKVN--EKIETSINLAWTAG 213
Query: 193 SSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSKKIIGSPA 252
S+ RF +D +T L + ++ + RP +TLSA D K
Sbjct: 214 SNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGH 273
Query: 253 KFGLALSLK 261
K GL L+
Sbjct: 274 KVGLGFELE 282
>POR2_MELGA (P82013) Voltage-dependent anion-selective channel
protein 2 (VDAC-2) (Outer mitochondrial membrane protein
porin 2)
Length = 282
Score = 63.5 bits (153), Expect = 5e-10
Identities = 66/269 (24%), Positives = 104/269 (38%), Gaps = 17/269 (6%)
Query: 4 KDYNFDH-KFSLSIPSSTGLGLTATGLKRDKF--FVGDLNTLYKSGN--VTVDVKVNTDS 58
K Y F K + S++G+ T +G G L T YK +T K NTD+
Sbjct: 19 KGYGFGLVKLDVKTKSASGVEFTTSGSSNTDTGKVNGSLETKYKWAEYGLTFTEKWNTDN 78
Query: 59 NVSTKVTLNDVSLSHSKKVALSFNIP-----DHKSGKLDVQYLHPHAAIDSSIGLNPA-P 112
+ T++ + D +K + L+F+ KSGK+ Y + + + A P
Sbjct: 79 TLGTEIAIED---QIAKGLKLTFDTTFSPNTGKKSGKIKSAYKRECLNLGCDVDFDFAGP 135
Query: 113 KLELSAAIGSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYI 172
+ SA G + G ++ FD+ + + N + + DF + D G S
Sbjct: 136 AIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFSVGYKTGDFQLHTNVND-GSEFGGSIY 194
Query: 173 HYVDRPDGLTVAAELAHKLSSSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRP 232
V D L A LA S+ RF +D + + ++ + RP
Sbjct: 195 QKVS--DNLETAVNLAWTAGSNSTRFGIAAKYKLDSTASISAKVNNSSLVGVGYTQTLRP 252
Query: 233 NSLITLSAEYDSKKIIGSPAKFGLALSLK 261
+TLSA D K I K GL L L+
Sbjct: 253 GVKLTLSALIDGKSINAGGHKLGLGLELE 281
>POR3_HUMAN (Q9Y277) Voltage-dependent anion-selective channel
protein 3 (VDAC-3) (hVDAC3) (Outer mitochondrial
membrane protein porin 3)
Length = 283
Score = 61.6 bits (148), Expect = 2e-09
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 13/249 (5%)
Query: 18 SSTGLGLTATGLKRDKFFVGDLNTLYKSGN--VTVDVKVNTDSNVSTKVTLNDVSLSHSK 75
S++G T TG G+L T YK N +T K NTD+ + T+++ + K
Sbjct: 42 STSGHAYTDTGKAS-----GNLETKYKVCNYGLTFTQKWNTDNTLGTEISWENKLAEGLK 96
Query: 76 KVALSFNIPD--HKSGKLDVQYLHPHAAIDSSIGLN-PAPKLELSAAIGSKDISMGAEVG 132
+ +P+ KSGKL Y ++ S++ ++ P + A + + G ++
Sbjct: 97 LTLDTIFVPNTGKKSGKLKASYKRDCFSVGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMS 156
Query: 133 FDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDGLTVAAELAHKLS 192
FDT + S N + + DF + D G S V+ + + + LA
Sbjct: 157 FDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSIYQKVN--EKIETSINLAWTAG 213
Query: 193 SSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSKKIIGSPA 252
S+ RF +D +T L + ++ + RP +TLSA D K
Sbjct: 214 SNNTRFGIAAKYMLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFSAGGH 273
Query: 253 KFGLALSLK 261
K GL L+
Sbjct: 274 KVGLGFELE 282
>POR3_MOUSE (Q60931) Voltage-dependent anion-selective channel
protein 3 (VDAC-3) (mVDAC3) (Outer mitochondrial
membrane protein porin 3)
Length = 283
Score = 61.2 bits (147), Expect = 2e-09
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 13/249 (5%)
Query: 18 SSTGLGLTATGLKRDKFFVGDLNTLYKSGN--VTVDVKVNTDSNVSTKVTLNDVSLSHSK 75
S++G T TG G+L T YK N +T K NTD+ + T+++ + K
Sbjct: 42 STSGHAYTDTGKAS-----GNLETKYKVCNYGLTFTQKWNTDNTLGTEISWENKLAEGLK 96
Query: 76 KVALSFNIPD--HKSGKLDVQYLHPHAAIDSSIGLN-PAPKLELSAAIGSKDISMGAEVG 132
+ +P+ KSGKL Y ++ S++ ++ P + A + + G ++
Sbjct: 97 LTLDTIFVPNTGKKSGKLKASYRRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMS 156
Query: 133 FDTTSASFSTYNAGIAFNKPDFSATLMLADKGQSLKASYIHYVDRPDGLTVAAELAHKLS 192
FDT + S N + + DF + D G S V+ + + + LA
Sbjct: 157 FDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSIYQKVN--ERIETSINLAWTAG 213
Query: 193 SSENRFTFGTSQSIDPKTVLKTRFSDDGKAAFQCQRAWRPNSLITLSAEYDSKKIIGSPA 252
S+ RF +D +T L + ++ + RP +TLSA D K
Sbjct: 214 SNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGH 273
Query: 253 KFGLALSLK 261
K GL L+
Sbjct: 274 KVGLGFELE 282
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.131 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,959,712
Number of Sequences: 164201
Number of extensions: 1129105
Number of successful extensions: 2223
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2147
Number of HSP's gapped (non-prelim): 38
length of query: 261
length of database: 59,974,054
effective HSP length: 108
effective length of query: 153
effective length of database: 42,240,346
effective search space: 6462772938
effective search space used: 6462772938
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Medicago: description of AC142506.2