Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC142222.7 + phase: 0 
         (555 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

MOC_ORYSA (Q84MM9) Protein MONOCULM 1                                 161  5e-39
MOT3_YEAST (P54785) Zinc finger protein MOT3/HMS1                      44  8e-04
PC11_YEAST (P39081) PCF11 protein                                      44  0.001
HUNB_DROYA (O62541) Hunchback protein                                  44  0.001
HUNB_DROOR (O62537) Hunchback protein                                  44  0.001
T2AA_HUMAN (P52655) Transcription initiation factor IIA alpha an...    44  0.001
OPAP_DROME (P23488) DROMSOPA protein                                   44  0.001
HUNB_DROSE (O62538) Hunchback protein                                  44  0.001
HUNB_DROME (P05084) Hunchback protein                                  44  0.001
YM38_YEAST (Q03825) Hypothetical 85.0 kDa protein in HLJ1-SMP2 i...    43  0.002
YH19_YEAST (P38900) Hypothetical 70.1 kDa protein in PUR5 3'region     43  0.002
MUC2_HUMAN (Q02817) Mucin 2 precursor (Intestinal mucin 2)             43  0.002
OVO_DROME (P51521) Ovo protein (Shaven baby protein)                   42  0.003
CAUP_DROME (P54269) Homeobox protein caupolican                        42  0.003
BM2K_HUMAN (Q9NSY1) BMP-2 inducible protein kinase (EC 2.7.1.37)...    42  0.003
YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 in chromosome II     41  0.009
PTP9_DROME (P35832) Protein-tyrosine phosphatase 99A precursor (...    41  0.009
AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor          41  0.009
NCO3_HUMAN (Q9Y6Q9) Nuclear receptor coactivator 3 (EC 2.3.1.48)...    40  0.012
CLA4_YEAST (P48562) Serine/threonine-protein kinase CLA4 (EC 2.7...    40  0.012

>MOC_ORYSA (Q84MM9) Protein MONOCULM 1
          Length = 441

 Score =  161 bits (407), Expect = 5e-39
 Identities = 127/406 (31%), Positives = 194/406 (47%), Gaps = 53/406 (13%)

Query: 186 STNPLLKTLTEIASLIETQKPNQAIETLTHLNKSISQNGNPNQRVSFYFSQALTNKITAQ 245
           ST  LL    ++    +     +A E +  L  + S  G+   R++++F++AL  ++ A+
Sbjct: 49  STRDLLLACADLLQRGDLPAARRAAEIV--LAAAASPRGDAADRLAYHFARALALRVDAK 106

Query: 246 SSIASSNSSSTTWEELTL-SYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIV 304
           +               +  +Y A N   P+ +FAHLTANQAILEA +G+  +HI+D   V
Sbjct: 107 AGHGHVVVGGGAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAV 166

Query: 305 QGIQWAALLQAFATRSSGK--PNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLN 362
            G+QW  LLQA A R+     P  VR++G  A         ++  TGNRL  FA+ + L 
Sbjct: 167 HGVQWPPLLQAIAERADPALGPPEVRVTGAGA------DRDTLLRTGNRLRAFARSIHLP 220

Query: 363 FEFTPIL------TPIELLDESSFC--------------IQPDEALAVNFMLQLYNLLDE 402
           F FTP+L       P  +   S+                  PDE LAVN ++ L+NL   
Sbjct: 221 FHFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNLAGH 280

Query: 403 NTNSVEKALRLAKSLNPKIVTLGEYEA-----------SLTTRVGFVERFETAFNYFAAF 451
             + +   L+  K+++P +VT+ E EA            L  RVG       A ++++A 
Sbjct: 281 --DELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRVG------VAMDHYSAV 332

Query: 452 FESLEPNMALDSPERFQVESLLLGRRIDGVIGVR--ERMEDKEQWKVLMENCGFESVGLS 509
           FE+LE  +   S ER  VE  +LGR I+  +G          E+W       GF +  LS
Sbjct: 333 FEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRGIERWGGAARAAGFAARPLS 392

Query: 510 HYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
            +A+SQA++LL    Y S   LV+       L W+  PLL+VS+W+
Sbjct: 393 AFAVSQARLLL-RLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQ 437


>MOT3_YEAST (P54785) Zinc finger protein MOT3/HMS1
          Length = 490

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 57/248 (22%), Positives = 95/248 (37%), Gaps = 37/248 (14%)

Query: 16  QQVINQKQQQEQHEQQQHQHHHHHQNILGITNPLSVSLHPWHNNNIPVSSSTSLPPLSFP 75
           QQ   Q+ QQ+QH+QQQHQH H  Q    + N   VS    + NNI   S  S P  +  
Sbjct: 10  QQQQRQQHQQQQHQQQQHQHQHQQQQHTILQN---VS----NTNNIGSDSLASQPFNTTT 62

Query: 76  PTDFTDPFQVGSGPENTDPAFNFPSPLDPHSTTFRFSDFDSDDWMDTLMSAADSHSD--- 132
            +   D   V SG      A   P PL      + +  + S++  +  ++A ++ S    
Sbjct: 63  VSSNKDDVMVNSG------ARELPMPLHQQQYIYPYYQYTSNNSNNNNVTAGNNMSASPI 116

Query: 133 FHLNPFSSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRKNDNTTTETTSSFSSSTNPLLK 192
            H N  +S  + +S          +   +     +    N+N         +++ N +  
Sbjct: 117 VHNNSNNSNNSNIS---------ASDYTVANNSTSNNNNNNNNN-------NNNNNNIHP 160

Query: 193 TLTEIASLIETQKPNQAIETLTHLNKSISQNG-----NPNQRVSFYFSQALTNKITAQSS 247
                A+ + +     A  +    N  I Q       NP   +S Y+S   +N     ++
Sbjct: 161 NQFTAAANMNSNAAAAAYYSFPTANMPIPQQDQQYMFNPASYISHYYSAVNSNNNGNNAA 220

Query: 248 IASSNSSS 255
              SN+SS
Sbjct: 221 NNGSNNSS 228


>PC11_YEAST (P39081) PCF11 protein
          Length = 626

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 52/246 (21%), Positives = 102/246 (41%), Gaps = 11/246 (4%)

Query: 16  QQVINQKQQQEQHEQQQHQHHHHHQNILGITNPLSVSLHP-WHNNNIPVSSSTSLPPLSF 74
           QQ   Q+QQQ+Q +QQQ Q +H  ++++G     S S  P + NN+   +   SL    F
Sbjct: 234 QQQQQQQQQQQQQQQQQQQQYHETKDMVGSYTQNSNSAIPLFGNNSDTTNQQNSLSSSLF 293

Query: 75  PPTDFTDPFQVGSGPENTDPAFNFPSPLDPHSTTFRFSDFDSDDWMDTLMSAADSHSDFH 134
                 + FQ     ++ +   N  + L      +        + + TL    + HS++ 
Sbjct: 294 GNISGVESFQEIEKKKSLNKINNLYASLKAEGLIYT----PPKESIVTLYKKLNGHSNYS 349

Query: 135 LNPFSSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRKNDNTTTETTSSFSSSTNPLLKTL 194
           L+       +  P+  LL    +  +           N N + + +       NP+++  
Sbjct: 350 LDSHEKQLMKNLPKIPLLNDILSDCKAYFATVNIDVLN-NPSLQLSEQTLLQENPIVQ-- 406

Query: 195 TEIASLIETQKPNQAIETLTHLNKSISQNGNPNQRVSFYF---SQALTNKITAQSSIASS 251
             +  L+   KPN+          S S+    N+ + ++F   ++   ++ TA + I++S
Sbjct: 407 NNLIHLLYRSKPNKCSVCGKRFGNSESEKLLQNEHLDWHFRINTRIKGSQNTANTGISNS 466

Query: 252 NSSSTT 257
           N ++TT
Sbjct: 467 NLNTTT 472


>HUNB_DROYA (O62541) Hunchback protein
          Length = 759

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 38/151 (25%), Positives = 62/151 (40%), Gaps = 34/151 (22%)

Query: 13  AIAQQVINQKQQQEQHEQQQHQHHHHHQNILGITNPLSV-----SLHPWHNNNI------ 61
           A  QQ + Q+QQ +QH Q   Q HHHH +++G  NPL+       +  ++  N+      
Sbjct: 95  ASLQQQLLQQQQYQQHFQAAQQQHHHHHHLMGGFNPLTPPGLPNPMQHFYGGNLRPSPQP 154

Query: 62  -PVSSSTSLP-----------PLSFPPTDFTDPFQVGSGPENTDPAFNFPSPLDPHSTTF 109
            P S+ST  P               PP D T P           PA +  S ++P     
Sbjct: 155 TPTSASTVAPVAVATGSSEKLQALTPPMDVTPP---------KSPAKSSQSNIEPEKEHD 205

Query: 110 RFSDFDSDDWMDTLMSAADSHSDFHLNPFSS 140
           + S+   D  M  +  + D  ++  +  ++S
Sbjct: 206 QMSNSSED--MKYMAESEDDDTNIRMPIYNS 234


>HUNB_DROOR (O62537) Hunchback protein
          Length = 767

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 36/149 (24%)

Query: 16  QQVINQKQQQEQHEQQQHQHHHHHQNILGITNPLSV-----SLHPWHNNNI-------PV 63
           QQ + Q+QQ +QH Q   Q HHHH +++G  NPL+       +  ++  N+       P+
Sbjct: 99  QQQLLQQQQYQQHFQAAQQQHHHHHHLMGGFNPLTPPGLPNPMQHFYGGNLRPSPQPTPI 158

Query: 64  SSST------------SLPPLSFPPTDFTDPFQVGSGPENTDPAFNFPSPLDPHSTTFRF 111
           S+ST             L  L+ PP D T P           PA +  S ++P     + 
Sbjct: 159 SASTVASVAVATGSSEKLQALT-PPMDVTPP---------KSPAKSSQSNIEPEKEHDQM 208

Query: 112 SDFDSDDWMDTLMSAADSHSDFHLNPFSS 140
           S+   D  M  ++ + D  ++  +  ++S
Sbjct: 209 SNSSED--MKYMVESEDDDTNIRMPIYNS 235


>T2AA_HUMAN (P52655) Transcription initiation factor IIA alpha and
          beta chains (TFIIA p35 and p19 subunits) (TFIIA-42)
          (TFIIAL)
          Length = 376

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 17/25 (68%), Positives = 20/25 (80%)

Query: 16 QQVINQKQQQEQHEQQQHQHHHHHQ 40
          QQ++ Q QQQ Q +QQQH HHHHHQ
Sbjct: 64 QQLLLQVQQQHQPQQQQHHHHHHHQ 88



 Score = 35.4 bits (80), Expect = 0.39
 Identities = 12/19 (63%), Positives = 15/19 (78%)

Query: 23 QQQEQHEQQQHQHHHHHQN 41
          Q Q+QH+ QQ QHHHHH +
Sbjct: 69 QVQQQHQPQQQQHHHHHHH 87


>OPAP_DROME (P23488) DROMSOPA protein
          Length = 69

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 19/35 (54%), Positives = 23/35 (65%)

Query: 8  SGNLMAIAQQVINQKQQQEQHEQQQHQHHHHHQNI 42
          SGNL A  QQ  +Q+QQQ Q +QQQH  HH H  +
Sbjct: 24 SGNLPAPEQQQHHQQQQQHQQQQQQHHQHHQHHQL 58


>HUNB_DROSE (O62538) Hunchback protein
          Length = 757

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 34/148 (22%)

Query: 16  QQVINQKQQQEQHEQQQHQHHHHHQNILGITNPLSV-----SLHPWHNNNI-------PV 63
           QQ + Q+QQ +QH Q   Q HHHH +++G  NPL+       +  ++  N+       P 
Sbjct: 96  QQQLLQQQQYQQHFQAAQQQHHHHHHLMGGFNPLTPPGLPNPMQHFYGGNLRPSPQPTPT 155

Query: 64  SSSTSLP-----------PLSFPPTDFTDPFQVGSGPENTDPAFNFPSPLDPHSTTFRFS 112
           S+ST  P               PP D T P           PA +  S ++P     + S
Sbjct: 156 SASTIAPVAVATGSSEKLQALTPPMDVTPP---------KSPAKSSQSNIEPEKEHDQMS 206

Query: 113 DFDSDDWMDTLMSAADSHSDFHLNPFSS 140
           +   D  M  +  + D  ++  +  ++S
Sbjct: 207 NSSED--MKYMAESEDDDTNIRMPIYNS 232


>HUNB_DROME (P05084) Hunchback protein
          Length = 758

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 34/148 (22%)

Query: 16  QQVINQKQQQEQHEQQQHQHHHHHQNILGITNPLSV-----SLHPWHNNNI-------PV 63
           QQ + Q+QQ +QH Q   Q HHHH +++G  NPL+       +  ++  N+       P 
Sbjct: 97  QQQLLQQQQYQQHFQAAQQQHHHHHHLMGGFNPLTPPGLPNPMQHFYGGNLRPSPQPTPT 156

Query: 64  SSSTSLP-----------PLSFPPTDFTDPFQVGSGPENTDPAFNFPSPLDPHSTTFRFS 112
           S+ST  P               PP D T P           PA +  S ++P     + S
Sbjct: 157 SASTIAPVAVATGSSEKLQALTPPMDVTPP---------KSPAKSSQSNIEPEKEHDQMS 207

Query: 113 DFDSDDWMDTLMSAADSHSDFHLNPFSS 140
           +   D  M  +  + D  ++  +  ++S
Sbjct: 208 NSSED--MKYMAESEDDDTNIRMPIYNS 233


>YM38_YEAST (Q03825) Hypothetical 85.0 kDa protein in HLJ1-SMP2
           intergenic region
          Length = 758

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 16  QQVINQKQQQEQHEQQQHQHHHHHQNILGITNPLSVSLHPWHNNNIPVSSSTSLPPLSFP 75
           QQ   Q+QQQ+Q +QQQ QH    Q    I NP  V   P  N     S ST L P S P
Sbjct: 305 QQQQQQQQQQQQQQQQQQQHQQQQQTPYPIVNPQMVPHIPSEN-----SHSTGLMP-SVP 358

Query: 76  PTD 78
           PT+
Sbjct: 359 PTN 361


>YH19_YEAST (P38900) Hypothetical 70.1 kDa protein in PUR5 3'region
          Length = 624

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 45/162 (27%), Positives = 69/162 (41%), Gaps = 11/162 (6%)

Query: 112 SDFDSDDWMDTLMSAADSHSDFHLNPFSSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRK 171
           SD DSD     +  +A++ ++   N  ++  T  S         TA + + T   T +  
Sbjct: 70  SDEDSDT---CIHGSANASTNATTNSSTNATTTASINVRTSATTTASINVRTSATTTEST 126

Query: 172 NDNTTTETTSSFSSSTNPLLKTLTEI---ASLIETQKPNQAIETL--THLNKSISQNGNP 226
           N NT   TT S +SSTN        +   A+  E+   N +  T   T  N S +   + 
Sbjct: 127 NSNTNATTTESTNSSTNATTTASINVRTSATTTESTNSNTSATTTESTDSNTSATTTEST 186

Query: 227 NQRVSFYFSQALTNKITAQSSIASSNSS--STTWEELTLSYK 266
           +   S   + A TN  T  ++ AS+NSS  +TT E    S K
Sbjct: 187 DSNTS-ATTTASTNSSTNATTTASTNSSTNATTTESTNASAK 227


>MUC2_HUMAN (Q02817) Mucin 2 precursor (Intestinal mucin 2)
          Length = 5179

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 5/139 (3%)

Query: 62   PVSSSTSLPPL---SFPPTDFTDP--FQVGSGPENTDPAFNFPSPLDPHSTTFRFSDFDS 116
            P +S+T+LPP    S PPT  T P      S P  T P+    +   P  TT   S   +
Sbjct: 1628 PPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITT 1687

Query: 117  DDWMDTLMSAADSHSDFHLNPFSSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRKNDNTT 176
                 T      S +    +P ++  T  S       P T     PT  P+P      T 
Sbjct: 1688 TPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTL 1747

Query: 177  TETTSSFSSSTNPLLKTLT 195
              TT+S   +T PL  ++T
Sbjct: 1748 PPTTTSSPLTTTPLPPSIT 1766



 Score = 39.3 bits (90), Expect = 0.027
 Identities = 42/162 (25%), Positives = 59/162 (35%), Gaps = 9/162 (5%)

Query: 62   PVSSSTSLPPLSFPP----TDFTDPFQVGSGPENTDPAFNFPS--PLDPHSTTFRFSDFD 115
            P +++T+LPP + P     T  T P      P  T      P+  P  P STT       
Sbjct: 1409 PPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPPTT 1468

Query: 116  SDDWMDTLMSAADSHSDFHLNPFSSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRKNDNT 175
            +     T  S   +         ++ P   +P P +  P T P    T PPT       T
Sbjct: 1469 TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTT 1528

Query: 176  TTET---TSSFSSSTNPLLKTLTEIASLIETQKPNQAIETLT 214
            TT T   T++ S  T   +   T   +L  T  P+    T T
Sbjct: 1529 TTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTT 1570



 Score = 38.1 bits (87), Expect = 0.061
 Identities = 42/180 (23%), Positives = 64/180 (35%), Gaps = 12/180 (6%)

Query: 45   ITNPLSVSLHPWHNNNIPVSSSTSLPPLSFPP-----TDFTDPFQVGSGPENTDPAFNFP 99
            IT P S +  P      P +++T+ PP +  P     T  T P    + P  T P+    
Sbjct: 1508 ITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT 1567

Query: 100  SPLDPHSTTFRFSDFDSDDWMDTLMSAADSHSDFHLNPFSSC---PTRLSPQPDLLLPAT 156
            +   P  TT       +     T+ +     +     P ++    P   +P P    P T
Sbjct: 1568 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627

Query: 157  APLQIPTQPPTPQRKNDNTTTETTSSFSSSTNPLLKT----LTEIASLIETQKPNQAIET 212
             P    T PPT       TTT T    ++ + P   T    +T   +   T  P+  I T
Sbjct: 1628 PPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITT 1687



 Score = 34.7 bits (78), Expect = 0.67
 Identities = 37/159 (23%), Positives = 56/159 (34%), Gaps = 17/159 (10%)

Query: 48   PLSVSLHPWHNNNIPVSSSTSLPPLSFPPTDFTDPFQVGSGPENTDPAFNFPSPLDPHST 107
            P +    P    + P +++T+ PP + P    T P         T P    PSP  P +T
Sbjct: 1473 PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPI-TPPASTTTLPPTTTPSP--PTTT 1529

Query: 108  TFRFSDFDSDDWMDTLMSAADSHSDFHLNPFSSCPTRLSPQPDLLLPATAPLQIPTQPPT 167
            T             T      + S     P +  PT  +  P    P+  P    T PPT
Sbjct: 1530 T-------------TTPPPTTTPSPPTTTPITP-PTSTTTLPPTTTPSPPPTTTTTPPPT 1575

Query: 168  PQRKNDNTTTETTSSFSSSTNPLLKTLTEIASLIETQKP 206
                   TTT +  + +++T P   T +   +   T  P
Sbjct: 1576 TTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPP 1614



 Score = 34.3 bits (77), Expect = 0.87
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 137  PFSSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRKNDNTTTETTSSFSSSTNPLLKTLTE 196
            P   C T  +P P    P+  P    T PPT       TTT T    ++ + P+  T T 
Sbjct: 1391 PMDKCIT--TPSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTP 1448

Query: 197  IASLIETQKPNQAIETLT 214
                + T  P+  I T T
Sbjct: 1449 ----LPTTTPSPPISTTT 1462



 Score = 32.3 bits (72), Expect = 3.3
 Identities = 33/148 (22%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 62   PVSSSTSLPPLSFP--PTDFTDPFQVGSGPENTDPAFNFPSPLDPHSTTFRFSDFDSDDW 119
            P  ++T+ PP + P  PT  T      + P  T P+    +P+ P ++T       +   
Sbjct: 1589 PTITTTTPPPTTTPSPPTTTTT-----TPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSP 1643

Query: 120  MDTLMSAADSHSDFHLNPFSSCPTRLSPQPDLLLPAT-APLQIPTQPPTPQRKNDNTTTE 178
              T  +     +        S PT  +P P +    T  P   P+ P T       TT  
Sbjct: 1644 PPTTTTTPPPTTT------PSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMT 1697

Query: 179  TTSSFSSSTNPLLKTLTEIASLIETQKP 206
            T S  ++ ++P+  T T  ++   +  P
Sbjct: 1698 TPSPTTTPSSPITTTTTPSSTTTPSPPP 1725



 Score = 32.0 bits (71), Expect = 4.3
 Identities = 41/171 (23%), Positives = 60/171 (34%), Gaps = 5/171 (2%)

Query: 45   ITNPLSVS-LHPWHNNNIPVSSSTSLPPLSFPPTDFTDPFQVGSGPENTDPAFNFPSPLD 103
            IT P S + L P    + P +++T+ PP + P    T      +    T P    PSP  
Sbjct: 1547 ITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPT 1606

Query: 104  PHSTTFRFSDFDSDDWMDTLMSAADSHSDFHLNPFSSCPTRLSPQPDLLLPATAPLQIPT 163
              +TT   +   S      +     + +       S  PT  +  P    P T P    T
Sbjct: 1607 TTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP----PTTTPSPPTT 1662

Query: 164  QPPTPQRKNDNTTTETTSSFSSSTNPLLKTLTEIASLIETQKPNQAIETLT 214
              P+P      T   TT+  S  T       T + +   T  P+  I T T
Sbjct: 1663 TTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTT 1713


>OVO_DROME (P51521) Ovo protein (Shaven baby protein)
          Length = 1028

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 21  QKQQQEQHEQQQHQHHHHHQNILGITNPLSVSLHPWHNNNIPVSSSTSLP 70
           Q+QQQ+QH QQQ  HH HHQ       P   S H  H+ +   +S+ SLP
Sbjct: 447 QQQQQQQHHQQQQHHHFHHQQ---QQQPQPQSHHSHHHGHGHDNSNMSLP 493



 Score = 34.7 bits (78), Expect = 0.67
 Identities = 17/38 (44%), Positives = 21/38 (54%), Gaps = 3/38 (7%)

Query: 16  QQVINQK---QQQEQHEQQQHQHHHHHQNILGITNPLS 50
           QQ + Q+   QQQ   +QQQ QHH HH N    +N  S
Sbjct: 811 QQSVQQQSVQQQQSLQQQQQQQHHQHHSNSSASSNASS 848


>CAUP_DROME (P54269) Homeobox protein caupolican
          Length = 693

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 46/187 (24%), Positives = 68/187 (35%), Gaps = 55/187 (29%)

Query: 16  QQVINQKQQQEQHEQQQHQHHHHHQNILGITNPLSVSLHPWHNNNIPVSSSTSLPPLSFP 75
           QQ + Q QQQ+QH    H HH HH   LG  +PLS+           +SS     P S  
Sbjct: 505 QQQLQQLQQQQQHHHHPHHHHPHHSMELG--SPLSM-----------MSSYAGGSPYSRI 551

Query: 76  PTDFTDPFQVGSGPENTDPAFNFPSPLDPHSTTFRFSDFDSDDWMDTLMSAADSHSDFHL 135
           PT +T+               + PS     S+T +                         
Sbjct: 552 PTAYTEAM-----------GMHLPSSSSSSSSTGKLP----------------------- 577

Query: 136 NPFSSCPTRLSPQPDLL-LPATAPLQIPTQPPTPQRKNDNTTTETTSSFSSSTNPLLKTL 194
                 PT + P P  +  P   P   P  PPT  + N +  + ++S  S S++    T 
Sbjct: 578 ------PTHIHPAPQRVGFPEIQPDTPPQTPPT-MKLNSSGGSSSSSGSSHSSSMHSVTP 630

Query: 195 TEIASLI 201
             +AS++
Sbjct: 631 VTVASMV 637


>BM2K_HUMAN (Q9NSY1) BMP-2 inducible protein kinase (EC 2.7.1.37)
           (BIKe) (HRIHFB2017)
          Length = 1161

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 16/24 (66%), Positives = 19/24 (78%)

Query: 16  QQVINQKQQQEQHEQQQHQHHHHH 39
           QQ   Q+QQQ+Q +QQQH HHHHH
Sbjct: 470 QQQQQQQQQQQQQQQQQHHHHHHH 493



 Score = 42.0 bits (97), Expect = 0.004
 Identities = 17/28 (60%), Positives = 21/28 (74%)

Query: 16  QQVINQKQQQEQHEQQQHQHHHHHQNIL 43
           QQ   Q+QQQ+Q +QQQ QHHHHH + L
Sbjct: 468 QQQQQQQQQQQQQQQQQQQHHHHHHHHL 495



 Score = 42.0 bits (97), Expect = 0.004
 Identities = 16/28 (57%), Positives = 21/28 (74%)

Query: 16  QQVINQKQQQEQHEQQQHQHHHHHQNIL 43
           QQ   Q+QQQ+Q +QQQ  HHHHH ++L
Sbjct: 469 QQQQQQQQQQQQQQQQQQHHHHHHHHLL 496


>YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 in chromosome II
          Length = 1240

 Score = 40.8 bits (94), Expect = 0.009
 Identities = 66/300 (22%), Positives = 111/300 (37%), Gaps = 50/300 (16%)

Query: 43  LGITNPLSVSLHPWHN--------------NNIPVSSSTSLPPLSFPPTDFTDPFQVG-- 86
           L +T  LS     W N              + +  SSST    + F   +F   F     
Sbjct: 53  LKVTECLSKQYEDWRNVTLIKGYERELEKCDCVLTSSSTETGTVKFLDREFFRVFSSAEI 112

Query: 87  ----SGPENTDPAFN---------FPSPLDPHSTTFRFSD----------FDSDDWMDTL 123
               S P  T P+ N         F   +D   T  R++            +S D    +
Sbjct: 113 ASTTSLPTTTSPSLNCYWLSEPSNFSEWIDGKQTNLRYNGGCCSETSIQVLNSSDSTRWI 172

Query: 124 MSAADSHSDFH-LNPFSSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRKNDNTTTETTSS 182
           ++ +DS +  + L     C     PQ  +L    + L   T   T        TTET + 
Sbjct: 173 LTTSDSWNKANALINLLYCTPNACPQQSMLWTNCSNLSTTTSSSTMLSSTTLLTTETETR 232

Query: 183 FSSSTNPLLKTL--TEIASLIETQKPNQAIETLTHLNKSISQNGNPNQRVSFYFSQALTN 240
            SSST     T   TE ++ I T  P +   T++ + K+ +    P+   +   S A T+
Sbjct: 233 ESSSTGSTQTTTPSTEPSTTITT--PMEQSSTVSSVQKTRTSEDKPSSSTTVPTS-ASTS 289

Query: 241 KITAQSSIASSNSSSTTWEELTLSYKALND-----ACPYSKFAHLTANQAILEATEGSNN 295
           + +  S +A ++SSSTT +    S   + +     + P +    L+ N+     + G ++
Sbjct: 290 ESSTSSPMAETSSSSTTSQSSPASTSTVPESSTVGSTPTTGLTTLSTNEQSTSTSSGGHS 349


>PTP9_DROME (P35832) Protein-tyrosine phosphatase 99A precursor (EC
            3.1.3.48) (Receptor-linked protein-tyrosine phosphatase
            99A)
          Length = 1301

 Score = 40.8 bits (94), Expect = 0.009
 Identities = 57/248 (22%), Positives = 92/248 (36%), Gaps = 37/248 (14%)

Query: 10   NLMAIAQQVIN--QKQQQEQHEQQQHQHHHHHQNILGITNPLSVSLHPWHNNNIPVSSST 67
            +++ + QQ +   Q+QQQ+Q +QQQ Q    ++ +   +   + SL       +P+ S  
Sbjct: 1064 HMLQLQQQHLETQQQQQQQQQQQQQQQQTALNETVSTPSTDTNPSL-------LPILS-- 1114

Query: 68   SLPPLSFPPTDFTDPFQVGSGPENTDPAFNFPSPLDPHSTTFRFSDFDSDDWMDTLMSAA 127
             LPP   P         + S    T P  + P+P  P   T + S     D    + S  
Sbjct: 1115 LLPPTVAP---------LSSSSSTTPPTPSTPTPQPPQ--TIQLSSHSPSDLSHQISSTV 1163

Query: 128  DSHSDFHLNPFSSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRKNDNTTTETTSSFSSST 187
             + +    +P +      S       P T P   PT P  P   + N+ T T ++F + T
Sbjct: 1164 ANAA----SPVTPATASASAGATPTTPMT-PTVPPTIPTIPSLASQNSLTLTNANFHTVT 1218

Query: 188  NPLLKTLTEIASLIETQKPNQAIETLTHLNKSISQNGNPNQ---RVSFYFSQALTNKITA 244
            N         A L+E Q+                 N +P Q    V         N  TA
Sbjct: 1219 N-------NAADLMEHQQQQMLALMQQQTQLQQQYNTHPQQHHNNVGDLLMNNADNSPTA 1271

Query: 245  QSSIASSN 252
              +I ++N
Sbjct: 1272 SPTITNNN 1279


>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor
          Length = 725

 Score = 40.8 bits (94), Expect = 0.009
 Identities = 48/217 (22%), Positives = 89/217 (40%), Gaps = 13/217 (5%)

Query: 62  PVSSSTSLPPLSFPPTDF-----TDPFQVGSGPENTDPAFNFPSPLDPHSTTFRFSDFDS 116
           PV+S+ S    S P T       T P    + P +T  + +  S     ++T   S   S
Sbjct: 168 PVTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTS 227

Query: 117 DDWMDTLMSAADSHSDFHLNPFSSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRKNDNTT 176
                T  S   + S       SS  T  S       P++      +   +P  K+ + +
Sbjct: 228 PSSTSTSSSLTSTSSSSTSTSQSSTST--SSSSTSTSPSSTSTSSSSTSTSPSSKSTSAS 285

Query: 177 TETTSSFSSSTNPLLKTLTEIASLIETQKPNQA--IETLTHLNKSI-SQNGNPNQRVSFY 233
           + +TSS+S+ST+P   +LT  +  + +  P+      T T    S+ S   + +  VS Y
Sbjct: 286 STSTSSYSTSTSP---SLTSSSPTLASTSPSSTSISSTFTDSTSSLGSSIASSSTSVSLY 342

Query: 234 FSQALTNKITAQSSIASSNSSSTTWEELTLSYKALND 270
                   + + SS  ++ S +++  E T+S ++ ++
Sbjct: 343 SPSTPVYSVPSTSSNVATPSMTSSTVETTVSSQSSSE 379



 Score = 39.3 bits (90), Expect = 0.027
 Identities = 36/141 (25%), Positives = 65/141 (45%), Gaps = 8/141 (5%)

Query: 139 SSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRKNDNTTTET----TSSFSSSTNPLLKTL 194
           SS PT  S    L   +T+P    T P +    + +T+T +    TSS S+ST+P   + 
Sbjct: 178 SSNPTTTS----LSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTST 233

Query: 195 TEIASLIETQKPNQAIETLTHLNKSISQNGNPNQRVSFYFSQALTNKITAQSSIASSNSS 254
           +   +   +   + +  + +  + S S + +     S   S + ++K T+ SS ++S+ S
Sbjct: 234 SSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYS 293

Query: 255 STTWEELTLSYKALNDACPYS 275
           ++T   LT S   L    P S
Sbjct: 294 TSTSPSLTSSSPTLASTSPSS 314



 Score = 35.8 bits (81), Expect = 0.30
 Identities = 42/194 (21%), Positives = 80/194 (40%), Gaps = 21/194 (10%)

Query: 154 PATAPLQIPTQPPTPQRKNDNTTTETTSSFSSSTNPLLKTLTEIASLIETQKPNQAIETL 213
           P++A +  P         + N TT  TS  S+ST+P   + +  ++   +   + +  + 
Sbjct: 160 PSSASIISPVTSTLSSTTSSNPTT--TSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSST 217

Query: 214 THLNKSISQNGNPNQRVSFYFSQALTNKITAQSSIASSNSSSTTWEELTLSYKALNDACP 273
           +  + S S + +     S   S + ++  T+QSS ++S+SS++T    T +  +     P
Sbjct: 218 STSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSP 277

Query: 274 YSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGI- 332
            SK    ++      +T  S                 +L  +  T +S  P+S  IS   
Sbjct: 278 SSKSTSASSTSTSSYSTSTS----------------PSLTSSSPTLASTSPSSTSISSTF 321

Query: 333 --PAMALGTSPVSS 344
                +LG+S  SS
Sbjct: 322 TDSTSSLGSSIASS 335


>NCO3_HUMAN (Q9Y6Q9) Nuclear receptor coactivator 3 (EC 2.3.1.48)
            (NCoA-3) (Thyroid hormone receptor activator molecule 1)
            (TRAM-1) (ACTR) (Receptor-associated coactivator 3)
            (RAC-3) (Amplified in breast cancer-1 protein) (AIB-1)
            (Steroid receptor coactiv
          Length = 1424

 Score = 40.4 bits (93), Expect = 0.012
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 11   LMAIAQQVINQKQQQEQHEQQQHQHHHHHQNILGITNPLSVSLHPWHNNNIPVSSSTSLP 70
            +M   QQ   Q+QQQ+Q +QQQ Q     Q     + P +V+  P  +  +   +    P
Sbjct: 1246 MMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQAFSPPPNVTASPSMDGLLAGPTMPQAP 1305

Query: 71   PLSFPPTDFTDPFQVGSGPENTDPAF 96
            P  FP   +   + +G  P   DPAF
Sbjct: 1306 PQQFP---YQPNYGMGQQP---DPAF 1325


>CLA4_YEAST (P48562) Serine/threonine-protein kinase CLA4 (EC
           2.7.1.37)
          Length = 842

 Score = 40.4 bits (93), Expect = 0.012
 Identities = 24/66 (36%), Positives = 37/66 (55%), Gaps = 3/66 (4%)

Query: 15  AQQVINQKQQQEQHEQQQHQHH-HHHQNILGITNPLSVSLHPW--HNNNIPVSSSTSLPP 71
           +Q+ + Q+QQQ+Q ++QQHQ + +HHQ      +P    L+P+  H+N I   S     P
Sbjct: 367 SQRSLQQQQQQQQQQKQQHQQYPYHHQGPSPSPSPSPSPLNPYRPHHNMINPYSKQPQSP 426

Query: 72  LSFPPT 77
           LS   T
Sbjct: 427 LSSQST 432


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.315    0.129    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,200,637
Number of Sequences: 164201
Number of extensions: 2792543
Number of successful extensions: 21658
Number of sequences better than 10.0: 319
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 16948
Number of HSP's gapped (non-prelim): 2234
length of query: 555
length of database: 59,974,054
effective HSP length: 115
effective length of query: 440
effective length of database: 41,090,939
effective search space: 18080013160
effective search space used: 18080013160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)


Medicago: description of AC142222.7