BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142222.6 - phase: 0
(123 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DCLY_SALTY (Q60002) Lysine decarboxylase, inducible (EC 4.1.1.18... 33 0.11
PDS5_YEAST (Q04264) Sister chromatid cohesion protein PDS5 (Prec... 32 0.25
MRS2_YEAST (Q01926) RNA splicing protein MRS2, mitochondrial pre... 31 0.43
DNLJ_BACSU (O31498) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleo... 31 0.43
NOL1_HUMAN (P46087) Proliferating-cell nucleolar antigen p120 (P... 31 0.56
A2MG_MOUSE (Q61838) Alpha-2-macroglobulin precursor (Alpha-2-M) 29 1.6
ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (X-linked hel... 29 2.1
ATRX_HUMAN (P46100) Transcriptional regulator ATRX (X-linked hel... 29 2.1
REPM_STAAU (P14490) Replication initiation protein 28 3.6
MURF_SYNY3 (P45450) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-... 28 4.7
SPE2_THECC (O81160) Arginine decarboxylase (EC 4.1.1.19) (ARGDC)... 27 6.2
SLIB_RAT (P09916) Somatoliberin precursor (Growth hormone-releas... 27 6.2
CH60_CHLMU (Q59322) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 27 6.2
BST1_HUMAN (Q10588) ADP-ribosyl cyclase 2 precursor (EC 3.2.2.5)... 27 6.2
ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (X-linked hel... 27 6.2
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 27 6.2
YKH7_YEAST (P36081) Hypothetical 46.0 kDa protein in SMY1-MUD2 i... 27 8.1
DNM1_CHICK (Q92072) DNA (cytosine-5)-methyltransferase 1 (EC 2.1... 27 8.1
CYAA_DICDI (Q03100) Adenylate cyclase, aggregation specific (EC ... 27 8.1
>DCLY_SALTY (Q60002) Lysine decarboxylase, inducible (EC 4.1.1.18)
(LDC)
Length = 714
Score = 33.1 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 28 ILAMLSRQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNELNDGVWQKEILMGG 87
I+A A +KG A K+L++ +A+ ++K+ K + D D VWQ E + G
Sbjct: 405 IVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLKSESDGWFFD-VWQPEHIDGA 462
Query: 88 KCEPLDFSGVIH 99
+C PL H
Sbjct: 463 ECWPLRSDSAWH 474
>PDS5_YEAST (Q04264) Sister chromatid cohesion protein PDS5
(Precocious dissociation of sisters protein 5)
Length = 1277
Score = 32.0 bits (71), Expect = 0.25
Identities = 24/73 (32%), Positives = 38/73 (51%), Gaps = 7/73 (9%)
Query: 5 TSSPESLSPKRQSNSSFFITISAILAMLSRQARRLKGKAKTKKLLSNMSNKALSQFGKMK 64
T PESL+ K Q+N I IL Q +RL+ K+LL++ +N++ + K+
Sbjct: 1162 TYIPESLTEKIQNNIK--AKIGRILHTSQTQRQRLQ-----KRLLAHENNESQKKKKKVH 1214
Query: 65 KTKKQRDNELNDG 77
+ Q D+E DG
Sbjct: 1215 HARSQADDEEGDG 1227
>MRS2_YEAST (Q01926) RNA splicing protein MRS2, mitochondrial
precursor
Length = 470
Score = 31.2 bits (69), Expect = 0.43
Identities = 25/87 (28%), Positives = 44/87 (49%), Gaps = 16/87 (18%)
Query: 10 SLSPKRQSNSSFFITISAILAMLSRQARRLKGKAKTKKLL------------SNMSNKAL 57
++ P +NSS + SA +A+ ++ RR K TK+ L +N+SN +
Sbjct: 376 TMYPNSPANSSVYPKTSASIALTNKLKRRRKWWKSTKQRLGVLLYGSSYTNKANLSNNKI 435
Query: 58 SQ-FGKMKKTKKQRD--NELN-DGVWQ 80
++ F K+KK + D N+ N D +W+
Sbjct: 436 NKGFSKVKKFNMENDIKNKQNRDMIWK 462
>DNLJ_BACSU (O31498) DNA ligase (EC 6.5.1.2)
(Polydeoxyribonucleotide synthase [NAD+])
Length = 668
Score = 31.2 bits (69), Expect = 0.43
Identities = 25/78 (32%), Positives = 39/78 (49%), Gaps = 5/78 (6%)
Query: 14 KRQSNSSFF----ITISAILAMLSRQARRLKGKAKTKKLLSNMS-NKALSQFGKMKKTKK 68
K + + S+F I ++ L LSR + + +A KL ++S N L G+ +K
Sbjct: 587 KAEDSDSYFAGKTIVLTGKLEELSRNEAKAQIEALGGKLTGSVSKNTDLVIAGEAAGSKL 646
Query: 69 QRDNELNDGVWQKEILMG 86
+ ELN VW +E LMG
Sbjct: 647 TKAQELNIEVWNEEQLMG 664
>NOL1_HUMAN (P46087) Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120)
Length = 855
Score = 30.8 bits (68), Expect = 0.56
Identities = 15/43 (34%), Positives = 24/43 (54%)
Query: 33 SRQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNELN 75
S+ A++ KG AKTK+ L + + F K+ K D+EL+
Sbjct: 620 SQPAKKAKGAAKTKQQLQKQQHPKKASFQKLNGISKGADSELS 662
>A2MG_MOUSE (Q61838) Alpha-2-macroglobulin precursor (Alpha-2-M)
Length = 1495
Score = 29.3 bits (64), Expect = 1.6
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 1 MANLTSSPESLSPKRQSNSSFFITISAILAMLSRQARRLKGKAKTKKLLSNMSNKALSQF 60
+A LTS ES P R +SS T S I+ +S+Q G T+ + ++ +ALS++
Sbjct: 1227 LAYLTS--ESSRPTRDLSSSDLSTASKIVKWISKQQNSDGGLLLTQDTV--VALQALSKY 1282
Query: 61 GKMKKTKKQRD 71
G T+ Q++
Sbjct: 1283 GSATFTRSQKE 1293
>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (X-linked helicase
II) (X-linked nuclear protein) (XNP)
Length = 2492
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 34 RQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNELNDGVWQKE 82
R+ R L K TK++ S S+ + + K KKQR + V KE
Sbjct: 1135 RERRNLSSKRNTKEIQSGSSSSDAEESSEDNKKKKQRTSSKKKAVIVKE 1183
>ATRX_HUMAN (P46100) Transcriptional regulator ATRX (X-linked helicase
II) (X-linked nuclear protein) (XNP) (Znf-HX)
Length = 2492
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 34 RQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNELNDGVWQKE 82
R+ R L K TK++ S S+ + + K KKQR + V KE
Sbjct: 1135 RERRNLSSKRNTKEIQSGSSSSDAEESSEDNKKKKQRTSSKKKAVIVKE 1183
>REPM_STAAU (P14490) Replication initiation protein
Length = 314
Score = 28.1 bits (61), Expect = 3.6
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 41 GKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNELN-DGVWQKEI 83
GKA+TK S SN+ + + K K+ K+ D +++ + +W+ EI
Sbjct: 172 GKAETKYFGSRDSNRFIRIYNKKKERKENADVDVSAEHLWRVEI 215
>MURF_SYNY3 (P45450)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
ligase (EC 6.3.2.10) (UDP-MurNAc-pentapeptide
synthetase) (D-alanyl-D-alanine-adding enzyme)
Length = 454
Score = 27.7 bits (60), Expect = 4.7
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 41 GKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNEL 74
GK TK+L++ + LSQFG + KT+ +NE+
Sbjct: 119 GKTTTKELIAAV----LSQFGNVHKTRANYNNEI 148
>SPE2_THECC (O81160) Arginine decarboxylase (EC 4.1.1.19) (ARGDC)
(ADC) (Fragment)
Length = 406
Score = 27.3 bits (59), Expect = 6.2
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 74 LNDGV------WQKEILMGGKCEPLDFSGVIHYDINGRQTGEVPLRSP 115
L+DGV + + + +G + + +DF G + D NG ++G+ L P
Sbjct: 168 LSDGVGEAAQIYSELVRLGARMKVVDFGGGLGIDYNGSKSGDSDLSVP 215
>SLIB_RAT (P09916) Somatoliberin precursor (Growth
hormone-releasing factor) (GRF) (Growth
hormone-releasing hormone) (GHRH)
Length = 104
Score = 27.3 bits (59), Expect = 6.2
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 30 AMLSRQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNELNDGVWQKE 82
A+ + RR+ G+ +KLL + N+ Q G+ + ++ R N D VW ++
Sbjct: 34 AIFTSSYRRILGQLYARKLLHEIMNR---QQGERNQEQRSRFNRHLDRVWAED 83
>CH60_CHLMU (Q59322) 60 kDa chaperonin (Protein Cpn60) (groEL
protein) (Heat shock protein 60) (HSP60)
Length = 543
Score = 27.3 bits (59), Expect = 6.2
Identities = 19/64 (29%), Positives = 33/64 (50%), Gaps = 2/64 (3%)
Query: 30 AMLSRQARRLKGKAKTKKLLSNMSNKALSQFGKMKKT-KKQRDNELNDGVWQKEILMGGK 88
AML A G+ +++L + N +L+ GK KK + D + +G+ +KE L +
Sbjct: 286 AMLEDIAILTGGQLISEELGMKLENASLAMLGKAKKVIVSKEDTTIVEGMGEKEAL-DAR 344
Query: 89 CEPL 92
CE +
Sbjct: 345 CESI 348
>BST1_HUMAN (Q10588) ADP-ribosyl cyclase 2 precursor (EC 3.2.2.5)
(Cyclic ADP-ribose hydrolase 2) (cADPr hydrolase 2)
(Bone marrow stromal antigen 1) (BST-1) (CD157 antigen)
Length = 318
Score = 27.3 bits (59), Expect = 6.2
Identities = 16/49 (32%), Positives = 25/49 (50%), Gaps = 5/49 (10%)
Query: 66 TKKQRDNELNDGVWQKEILMGGKCEPLDFSGVIHYDINGRQ-TGEVPLR 113
T + +N D W++ + K D SGVIH +NG + TG P++
Sbjct: 159 TSEDCENNPVDSFWKRASIQYSK----DSSGVIHVMLNGSEPTGAYPIK 203
>ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (X-linked helicase
II) (X-linked nuclear protein) (XNP)
Length = 2492
Score = 27.3 bits (59), Expect = 6.2
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 34 RQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNELNDGVWQKE 82
R+ R L K TK++ S S+ + + K K+QR + V KE
Sbjct: 1135 RERRNLSSKRNTKEIQSGSSSSDAEESSEDNKKKQQRTSSKKKAVIVKE 1183
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 27.3 bits (59), Expect = 6.2
Identities = 13/41 (31%), Positives = 24/41 (57%)
Query: 34 RQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNEL 74
R+ + K KTKK S+ S++ + K+KK+KK ++ +
Sbjct: 136 REQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSV 176
>YKH7_YEAST (P36081) Hypothetical 46.0 kDa protein in SMY1-MUD2
intergenic region
Length = 392
Score = 26.9 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 37 RRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQ 69
RR+ GK K NM N ++ KKT KQ
Sbjct: 359 RRVLGKFSEMKKFKNMKNHKYTELPSYKKTSKQ 391
>DNM1_CHICK (Q92072) DNA (cytosine-5)-methyltransferase 1 (EC
2.1.1.37) (Dnmt1) (DNA methyltransferase GgaI) (DNA
MTase GgaI) (MCMT) (M.GgaI)
Length = 1537
Score = 26.9 bits (58), Expect = 8.1
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 6 SSPESLSPKRQSNSSFFITISAILAMLSRQARRLKGKAKTKKLLSNMSNKALSQFGKM-- 63
SS S S S+SS + S + A +R+ARR + ++KK S S++ G+
Sbjct: 129 SSSSSSSSSSSSSSSSSSSSSLLPAPRARKARRSRSNGESKK--SPASSRVTRSSGRQPT 186
Query: 64 ------KKTKKQRDNELNDGV 78
K + K++ E+N V
Sbjct: 187 ILSVFSKGSTKRKSEEVNGAV 207
>CYAA_DICDI (Q03100) Adenylate cyclase, aggregation specific (EC
4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)
Length = 1407
Score = 26.9 bits (58), Expect = 8.1
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 3 NLTSSPESLSPKRQSNSSFFITISAILAMLSRQARRLKGKAKTKKLLSNMSNKALSQ--- 59
N ++ E K +SNSSF I +S I SR R+ G K+ ++ +K + Q
Sbjct: 868 NNNNNEEDFKIKSKSNSSFEIEMSNIKKPKSRFIDRVMGILHHVKISNDKIDKEIIQIDE 927
Query: 60 -FGKMKKTKK 68
F K+ K +K
Sbjct: 928 DFVKVTKLRK 937
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,270,261
Number of Sequences: 164201
Number of extensions: 476617
Number of successful extensions: 1362
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1355
Number of HSP's gapped (non-prelim): 19
length of query: 123
length of database: 59,974,054
effective HSP length: 99
effective length of query: 24
effective length of database: 43,718,155
effective search space: 1049235720
effective search space used: 1049235720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC142222.6