BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141436.3 + phase: 0 /pseudo
         (223 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PGP_ARCFU (O29805) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGP)    32  0.91
PCK1_SCHPO (P36582) Protein kinase C-like 1 (EC 2.7.1.-)               31  2.0
YYAL_BACSU (P37512) Hypothetical protein yyaL                          30  5.9
HMD1_YEAST (P12683) 3-hydroxy-3-methylglutaryl-coenzyme A reduct...    30  5.9

>PGP_ARCFU (O29805) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGP)
          Length = 223

 Score = 32.3 bits (72), Expect = 0.91
 Identities = 17/42 (40%), Positives = 24/42 (56%)

Query: 2   RSFKDGELKKKVEGMGYAMNIPTFEYYRSEIDVADRKALAWV 43
           RSF   E +K +EGMG  +    F Y+  + DV+  KAL +V
Sbjct: 115 RSFDINEARKLIEGMGVKLVDSGFAYHIMDADVSKGKALKFV 156


>PCK1_SCHPO (P36582) Protein kinase C-like 1 (EC 2.7.1.-)
          Length = 988

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 96  AALFAKRGHEAAARVNSGEPFSENSMKYLRNEV----IKSNSHHVTQFDRD---RYTFSV 148
           A + + +  E   R+ S    SEN++KYLR  +    ++S S   +Q D+D   +Y+ S 
Sbjct: 27  AMVASTKNPEVKRRLESNIAVSENNIKYLRERIDALKVESGSERESQSDKDSSKKYSDSA 86

Query: 149 RETIEHKEGLPKGEYKVDLQN 169
           + T      L       DL N
Sbjct: 87  KSTNSDDHLLSYNRSAFDLFN 107


>YYAL_BACSU (P37512) Hypothetical protein yyaL
          Length = 689

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 1   MRSFKDGELKKKVEGMGYAMNIPTF-EYYRSEIDVAD-RKALAWVDNIPKQKWNQSHDDG 58
           M  ++DGE+K K     YA  +  + + Y +  D++  +KA    D++    W++ H   
Sbjct: 463 MVRYRDGEVKNKGFIDDYAFLLWAYLDLYEASFDLSYLQKAKKLTDDMISLFWDEEHGGF 522

Query: 59  RRWGHMTSNLVESQNNVYKG 78
              GH    L+  +  VY G
Sbjct: 523 YFTGHDAEALIVREKEVYDG 542


>HMD1_YEAST (P12683) 3-hydroxy-3-methylglutaryl-coenzyme A reductase
           1 (EC 1.1.1.34) (HMG-CoA reductase 1)
          Length = 1054

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 5/48 (10%)

Query: 175 GRFRALHLPCSHVIAACSSFSHDYKTFVDNKFTNECVYAVYNIHFDVV 222
           GR    HL C      CS ++H  KT      TN C+ + + + F+++
Sbjct: 303 GRLIQDHLLCIFAFIGCSMYAHQLKT-----LTNFCILSAFILIFELI 345


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.320    0.135    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,154,982
Number of Sequences: 164201
Number of extensions: 1110290
Number of successful extensions: 2260
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2259
Number of HSP's gapped (non-prelim): 4
length of query: 223
length of database: 59,974,054
effective HSP length: 106
effective length of query: 117
effective length of database: 42,568,748
effective search space: 4980543516
effective search space used: 4980543516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)