BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141414.5 - phase: 0 /pseudo
         (689 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

IL6A_HUMAN (P08887) Interleukin-6 receptor alpha chain precursor...    34  1.1
OC17_CHICK (Q9PRS8) Ovocleidin 17 (OC-17)                              34  1.5
NIA_PICAN (P49050) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)         34  1.5
RL3_GEOSL (P60454) 50S ribosomal protein L3                            32  5.6
SYK_ARATH (Q9ZPI1) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t...    31  9.5

>IL6A_HUMAN (P08887) Interleukin-6 receptor alpha chain precursor
           (IL-6R-alpha) (IL-6R 1) (CD126 antigen)
          Length = 468

 Score = 34.3 bits (77), Expect = 1.1
 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 11/67 (16%)

Query: 390 PGDAERL--PGXEVGD-----WVRSKPSLGNRPSYDWNSVGRESLAVVHSVQDSGYLELA 442
           PGD+  L  PG E  D     WV  KP+ G+ PS  W  +GR  L     + DSG     
Sbjct: 39  PGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPS-RWAGMGRRLLLRSVQLHDSGNYS-- 95

Query: 443 CCFRKGK 449
            C+R G+
Sbjct: 96  -CYRAGR 101


>OC17_CHICK (Q9PRS8) Ovocleidin 17 (OC-17)
          Length = 142

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 19/99 (19%)

Query: 545 GPGSVGVVQG-IGYEGGETDRSTFVGFCGEQEKWVGPSSHLERVDKLIVGQKVRVKQNVK 603
           GPG V    G +G+   E   S    FC    +W GP SHL  V       ++R+   + 
Sbjct: 6   GPGWVPTPGGCLGFFSRELSWSRAESFC---RRW-GPGSHLAAVRS---AAELRLLAELL 58

Query: 604 QPRFGWSGHTHASIGTIQAIDADGKLWI--YTPAGSRTW 640
               G  G             ADG++WI  + PAGSR+W
Sbjct: 59  NASRGGDGSGEG---------ADGRVWIGLHRPAGSRSW 88


>NIA_PICAN (P49050) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)
          Length = 859

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 26/88 (29%), Positives = 40/88 (44%), Gaps = 1/88 (1%)

Query: 518 SDLQAEQIFEVGEWVRLKENVNNWKSIGPGSVGVVQGIGYEGGETDRSTFVGFCGEQEKW 577
           S+ +A +  E   W  +K  V +  S      G  Q I    GE     F+       K 
Sbjct: 508 SEFEAHKDSETEPWFAVKGQVFDGSSYLEDHPGGAQSILMVSGEDATDDFIAIHSSFAKK 567

Query: 578 VGPSSHLERVDKLIVGQKVR-VKQNVKQ 604
           + PS HL R++++    KV+ V+QNVK+
Sbjct: 568 LLPSMHLGRLEEVSSVTKVKSVEQNVKR 595


>RL3_GEOSL (P60454) 50S ribosomal protein L3
          Length = 210

 Score = 32.0 bits (71), Expect = 5.6
 Identities = 35/146 (23%), Positives = 64/146 (42%), Gaps = 26/146 (17%)

Query: 485 AQPESQGIITNIHADGE---VRVAFFGLSGLWKGDPSDLQAEQIFEVGEWVRLKENVNNW 541
           A+  ++ ++ +I A G+     +  F L  + + +  D+ +   FEVGE++ +       
Sbjct: 58  ARKVTKPMLGHIKAAGQGAFAHIREFRLDDVDRYNVGDVISADAFEVGEYIDVTGT---- 113

Query: 542 KSIGPGSVGVVQGIGYEGGETDRSTFVGFCGEQEKW-VGPSSHLERVDKLIVGQKVRVKQ 600
            SIG G  GV++  G+ GG +      G C  +    +G S++  RV K           
Sbjct: 114 -SIGKGFQGVIKRWGFRGGRSSH----GSCFHRAPGSIGSSAYPSRVFK----------- 157

Query: 601 NVKQPRFGWSGHTHASIGTIQAIDAD 626
           N K P  G  G+   ++  +Q +  D
Sbjct: 158 NKKMP--GQLGNERVTVQRLQVVRVD 181


>SYK_ARATH (Q9ZPI1) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA
           ligase) (LysRS)
          Length = 626

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query: 185 ELSYVQNPWHCEPEEIEHVPPFRNLDMLGVVRHITVL 221
           ++ Y  N +  +P EI+  PPFR ++M+G +  +  L
Sbjct: 406 KIKYNANGYDKDPIEIDFTPPFRRIEMIGELEKVAKL 442


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.328    0.144    0.480 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,013,311
Number of Sequences: 164201
Number of extensions: 3867785
Number of successful extensions: 8564
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8563
Number of HSP's gapped (non-prelim): 5
length of query: 689
length of database: 59,974,054
effective HSP length: 117
effective length of query: 572
effective length of database: 40,762,537
effective search space: 23316171164
effective search space used: 23316171164
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)