BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141322.10 + phase: 0 /pseudo
(409 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IM44_MOUSE (O35857) Import inner membrane translocase subunit TI... 89 2e-17
IM44_RAT (O35094) Import inner membrane translocase subunit TIM4... 86 2e-16
IM44_HUMAN (O43615) Import inner membrane translocase subunit TI... 83 1e-15
IM44_SCHPO (O60084) Import inner membrane translocase subunit ti... 78 5e-14
IM44_YEAST (Q01852) Import inner membrane translocase subunit TI... 76 2e-13
IM44_CAEEL (O02161) Probable import inner membrane translocase s... 75 2e-13
HS7C_CAEEL (P27420) Heat shock 70 kDa protein C precursor 45 3e-04
MNN4_YEAST (P36044) MNN4 protein 43 0.001
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 42 0.003
TOLA_HAEIN (P44678) TolA protein 41 0.006
DNAK_MYCPE (Q8EUH7) Chaperone protein dnaK (Heat shock protein 7... 41 0.006
YDF3_SCHPO (Q10475) Probable eukaryotic initiation factor C17C9.03 40 0.011
CN1C_MOUSE (Q64338) Calcium/calmodulin-dependent 3',5'-cyclic nu... 40 0.014
TAC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing p... 39 0.018
GARP_PLAFF (P13816) Glutamic acid-rich protein precursor 39 0.018
AZI1_MOUSE (Q62036) 5-azacytidine induced protein 1 (Pre-acrosom... 39 0.018
LE29_GOSHI (P13940) Late embryogenesis abundant protein D-29 (LE... 39 0.024
CYL2_HUMAN (Q14093) Cylicin II (Multiple-band polypeptide II) 39 0.024
CN1C_RAT (Q63421) Calcium/calmodulin-dependent 3',5'-cyclic nucl... 39 0.024
YTA4_BACAN (Q9RN27) Hypothetical protein pXO2-05/BXB0004/GBAA_pX... 39 0.031
>IM44_MOUSE (O35857) Import inner membrane translocase subunit
TIM44, mitochondrial precursor
Length = 452
Score = 89.0 bits (219), Expect = 2e-17
Identities = 94/418 (22%), Positives = 180/418 (42%), Gaps = 61/418 (14%)
Query: 9 NSVDRRGYSVFNEFSKKVKDETVKNPEFQKSVKELKEKAEELKGIKEGLKEKTKQTTEQL 68
+S R+G+ + +K E KN E ++S+K+ +++A++L+ + L+E ++
Sbjct: 52 SSGSRKGF--LSGLLDNIKQELAKNKEMKESIKKFRDEAKKLEE-SDALQEARRK----- 103
Query: 69 YRQFDSVWKEAEAAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNEESPSGN 128
+K E+ + S +K+K+ T + K++ D S + ++ E +
Sbjct: 104 -------YKSIESETVRTSEAIKKKLGELTG-TVKESLDEVSKSDLGRKIKEGVEEAART 155
Query: 129 ASESLFGKFKSTFSSPMVSTSFQKLKDAKLWT*PRKVMTY*RRS*VVTHLRDSVF--VSP 186
A +S + VS S +KL + K ++ S V L +SV P
Sbjct: 156 AKQS----------AESVSKSGEKLGKTAAF----KAISQGVES-VKKELDESVLGQTGP 200
Query: 187 AK*VQKLILLLCPLTNLGGVRRLMSS---------GIRRHPVSKNFVKYIDPVKTTSRDI 237
+ ++L T G + S G+ H SK + ++ D ++
Sbjct: 201 YRRPERLR----KRTEFAGAKFKESKVFEANEEALGVVLHKDSKWYQQWKD---FKDNNV 253
Query: 238 V-----------DDVRDIIDRIDNPIIDKIQSNMSRTFQETDAALTYREIRKRDPKFSLP 286
V D+ +++ R + DK+ + F +T+ + EI + DP F
Sbjct: 254 VFNRFFEMKMKYDESDNVLIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPTFDKD 313
Query: 287 DFVGEVQEAIKP-VLNAYIKGDFETLKKYCAPQLIERCKAEHGAYKDRGIFYDNKILHIS 345
F+ + + I P +L A I G+ + LK +C + K G + ++IL IS
Sbjct: 314 HFLHQCETDIIPNILEAMISGELDILKDWCYEATYSQLAHPIQQAKALGFQFHSRILDIS 373
Query: 346 DADVREVKILESSPFIIVVFQTQQIHCVRDRNGEITEGGKDTIHSVYYLWALQMDSED 403
+ D+ K++E P +IV FQ Q + +++ GE+ +G D + + Y+WAL D E+
Sbjct: 374 NVDLAMGKMMEQGPVLIVTFQAQVVMVIKNSKGEVYDGDPDKVQRMLYVWALCRDQEE 431
>IM44_RAT (O35094) Import inner membrane translocase subunit TIM44,
mitochondrial precursor
Length = 453
Score = 85.5 bits (210), Expect = 2e-16
Identities = 88/409 (21%), Positives = 170/409 (41%), Gaps = 43/409 (10%)
Query: 9 NSVDRRGYSVFNEFSKKVKDETVKNPEFQKSVKELKEKAEELKGIKEGLKEKTKQTTEQL 68
+S R+G+ + +K E +N E ++S+K+ +++A++L+ + Q +
Sbjct: 53 SSGSRKGF--LSGLLDNIKQELAQNKEMKESIKKFRDEAKKLE------ESDALQEARRK 104
Query: 69 YRQFDSVWKEAEAAAKKVSHNVKEKISAATDFSTKQNADAK--QGSQKSPEEEKNEESPS 126
Y+ +S A KK + + + D +K + K +G +++ K
Sbjct: 105 YKTIESETVRTSEAIKKKLGELTGTVKESLDEVSKSDLGRKIKEGVEEAARTAKQSAESV 164
Query: 127 GNASESLFGKFKSTFSSPMVSTSFQKLKDAKLWT*PRKVMTY*RRS*VVTHLRDSVFVSP 186
E L GK T + +S + +K + TY R LR +
Sbjct: 165 SKGGEKL-GK---TAAFKAISQGVESVKKEIDESVLGHTGTYRRPE----RLRKRTEFAG 216
Query: 187 AK*VQKLILLLCPLTNLGGVRRLMSSGIRRHPVSKNFVKYIDPVKTTSRDIV-------- 238
AK + + + G+ H SK + ++ D ++V
Sbjct: 217 AKFKESKVF----------EANEEALGVVLHKDSKWYQQWKD---FKDNNVVFNRFFEMK 263
Query: 239 ---DDVRDIIDRIDNPIIDKIQSNMSRTFQETDAALTYREIRKRDPKFSLPDFVGEVQEA 295
D+ +++ R + DK+ + F +T+ + EI + DP F F+ + +
Sbjct: 264 MKYDESDNVLIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPTFDKDRFLHQCETD 323
Query: 296 IKP-VLNAYIKGDFETLKKYCAPQLIERCKAEHGAYKDRGIFYDNKILHISDADVREVKI 354
I P +L A I G+ + LK +C + K G+ + ++IL IS+ D+ K+
Sbjct: 324 IIPNILEAMISGELDILKDWCYEATYNQLAHSIQQAKALGLQFHSRILDISNVDLAMGKM 383
Query: 355 LESSPFIIVVFQTQQIHCVRDRNGEITEGGKDTIHSVYYLWALQMDSED 403
+E P +IV FQ Q + +++ GE+ +G D + + Y+WAL D E+
Sbjct: 384 MEQGPVLIVTFQAQLVMVIKNPKGEVFDGDPDKVLRMLYVWALCRDQEE 432
>IM44_HUMAN (O43615) Import inner membrane translocase subunit
TIM44, mitochondrial precursor
Length = 452
Score = 82.8 bits (203), Expect = 1e-15
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
Query: 239 DDVRDIIDRIDNPIIDKIQSNMSRTFQETDAALTYREIRKRDPKFSLPDFVGEVQEAIKP 298
D+ + R + DK+ + F +T+ + EI + DP F F+ + + I P
Sbjct: 266 DESDNAFIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPAFDKDRFLKQCENDIIP 325
Query: 299 -VLNAYIKGDFETLKKYCAPQLIERCKAEHGAYKDRGIFYDNKILHISDADVREVKILES 357
VL A I G+ + LK +C + K G+ + ++IL I + D+ K++E
Sbjct: 326 NVLEAMISGELDILKDWCYEATYSQLAHPIQQAKALGLQFHSRILDIDNVDLAMGKMMEQ 385
Query: 358 SPFIIVVFQTQQIHCVRDRNGEITEGGKDTIHSVYYLWALQMDSED 403
P +I+ FQ Q + VR+ GE+ EG D + + Y+WAL D ++
Sbjct: 386 GPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRMLYVWALCRDQDE 431
>IM44_SCHPO (O60084) Import inner membrane translocase subunit
tim44, mitochondrial precursor
Length = 427
Score = 77.8 bits (190), Expect = 5e-14
Identities = 52/180 (28%), Positives = 87/180 (47%), Gaps = 13/180 (7%)
Query: 227 IDPVKTTSRDI--VDDVRDIIDRIDNPII-------DKIQSNMSRTFQETDAALTYREIR 277
++ +K SR + + +++ ++PI+ D I SR F ET+A+ R +
Sbjct: 215 VEQIKNESRLVRKIQELKKSYQESEHPIVSSIRDMADSISGVWSRMFSETEASQVMRRFK 274
Query: 278 KRDPKFSLPDFVGEVQEAIKP-VLNAYIKGDFETLKKYCAPQLIERCKAEHGAYKDRGIF 336
+ DP F+ F+ ++E I P V AY+KGD E LK + + + Y G+
Sbjct: 275 EIDPSFNTEHFLQYLREYIVPEVTEAYVKGDKEVLKTWLSEAPFSVYETTTKEYAKHGVV 334
Query: 337 YDNKILHISDADVREVKILESS--PFIIVVFQTQQIHCVRD-RNGEITEGGKDTIHSVYY 393
KIL I D+ ++L+ + P IV F+TQ++H +D +GE+ G D I Y
Sbjct: 335 SVGKILDIRGVDIMSQRLLQPNDIPVFIVTFRTQEVHMFKDASSGELVAGKDDRIQQCTY 394
>IM44_YEAST (Q01852) Import inner membrane translocase subunit
TIM44, mitochondrial precursor (Mitochondrial protein
import protein 1) (Inner membrane import site protein
45) (ISP45) (Membrane import machinery protein MIM44)
Length = 431
Score = 75.9 bits (185), Expect = 2e-13
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 221 KNFVKYIDPVK---TTSRDIVDDVRDIIDRIDNPII---DKIQSNMSRTFQETDAALTYR 274
++F K ++ K R I + D +NP+I KI + + F ET+++ Y
Sbjct: 216 ESFGKKVEDFKEKTVVGRSIQSLKNKLWDESENPLIVVMRKITNKVGGFFAETESSRVYS 275
Query: 275 EIRKRDPKFSLPDFVGEVQEAIKP-VLNAYIKGDFETLKKYCAPQLIERCKAEHGAYKDR 333
+ + DP FS F ++E I P +L AY+KGD + LKK+ + A+ +K++
Sbjct: 276 QFKLMDPTFSNESFTRHLREYIVPEILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQ 335
Query: 334 GIFYDNKILHISDADVREVKIL--ESSPFIIVVFQTQQIHCVR-DRNGEITEGGKDTIHS 390
++ D +IL I ++ K+L + P ++V + Q+I+ R + GEI G + I
Sbjct: 336 DVYADGRILDIRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILM 395
Query: 391 VYYLWALQMDSEDHAED 407
Y D E +D
Sbjct: 396 SSYAMVFTRDPEQIDDD 412
>IM44_CAEEL (O02161) Probable import inner membrane translocase
subunit TIM44, mitochondrial precursor
Length = 425
Score = 75.5 bits (184), Expect = 2e-13
Identities = 96/422 (22%), Positives = 171/422 (39%), Gaps = 59/422 (13%)
Query: 2 VKTRLFVNSVDRRGYSVFNEFSKKVKDETVKNPEFQKSVKELKEKAEELKGIKEGLKEKT 61
V R + N +RG+ N V+DE KN E Q+ ++LK + +EL + LK+
Sbjct: 24 VTFRDYSNPAPKRGF--LNNLIDNVRDEMQKNKELQEHQQQLKARMQELNE-SDALKDAR 80
Query: 62 KQTTEQLYRQFDSVWKEAEAAAKKVSHNVKEKISAATDFSTK-----QNADAKQGSQKSP 116
K+ F+ V KE K S VK+KI +D K Q +A + ++
Sbjct: 81 KK--------FEIVEKET----LKSSEVVKQKIEELSDHMKKMVHEIQKTEAGKKMTEAG 128
Query: 117 EEEKNEESPSGNASESLFGKFKSTFSSPMVSTSFQKLKD-------AKLWT*PRKVMTY* 169
E + + E + K T VSTS + +KD ++++ P
Sbjct: 129 AEALKQARKAAEHVEKVAEKVGDTEVYKHVSTSMKTVKDEIDNIADVRMYSRPE------ 182
Query: 170 RRS*VVTHLRDSVFVSPAK*VQKL-----ILLLCPLTNLGGVRRLMSSGIRRHPVSKNFV 224
+T D + + V+ + L G + S H + +
Sbjct: 183 ----ALTKRTDGFDLEKERVVEANDSATDVTLHKDSKWYSGWKNFSESNTYYHKLLDWKI 238
Query: 225 KYIDPVKTTSRDIVDDVRDIIDRIDNPIIDKIQSNMSRTFQETDAALTYREIRKRDPKFS 284
KY D+ ++ R+ + +KI S S E LT EI K D F
Sbjct: 239 KY------------DESDNMAVRMMRGVTEKIGSVFSGQ-NEVSEVLT--EIHKIDANFD 283
Query: 285 LPDFVGEVQEAIKP-VLNAYIKGDFETLKKYCAPQLIERCKAEHGAYKDRGIFY-DNKIL 342
+++ + I P +L A+I+ D E L+ +C + + Y+ D++I+
Sbjct: 284 KQEWLRFCETKIIPNILEAFIRFDLEVLQSWCHERAYTQLSTVVKEYQKMHFSTKDSRII 343
Query: 343 HISDADVREVKILESSPFIIVVFQTQQIHCVRDRNGEITEGGKDTIHSVYYLWALQMDSE 402
I+ ++ K++E P +I+ FQ I+ ++ +G++ EG D + ++W L D E
Sbjct: 344 DINKVEMATGKMMEQGPVLIISFQVYMINVTKNADGKVVEGDPDNPKRINHIWVLCRDVE 403
Query: 403 DH 404
++
Sbjct: 404 EY 405
>HS7C_CAEEL (P27420) Heat shock 70 kDa protein C precursor
Length = 661
Score = 45.1 bits (105), Expect = 3e-04
Identities = 30/106 (28%), Positives = 52/106 (48%), Gaps = 1/106 (0%)
Query: 19 FNEFSKKVKDETVKNPEFQKSVKELKEKAEELKGIKEGLKEKTKQTTEQLYRQFDS-VWK 77
F E KKVKD+ E + LK + E+ + + L E K+T E+ + S +
Sbjct: 553 FAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGS 612
Query: 78 EAEAAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNEE 123
AEA+A+++ K+ S +K DA G +++PEE +++
Sbjct: 613 NAEASAEELKEQKKDLESKVQPIVSKLYKDAGAGGEEAPEEGSDDK 658
>MNN4_YEAST (P36044) MNN4 protein
Length = 1178
Score = 43.1 bits (100), Expect = 0.001
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 21 EFSKKVKDETVKNPEFQKSVKEL--KEKAEELKGIKEGLKEKTKQTTEQLYRQFDSVWKE 78
E KK ++E K E +K KE K+K EE + K+ +EK KQ + + D K+
Sbjct: 1065 EKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKK 1124
Query: 79 AEAAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNEESPSGNASE 131
E KK + ++K + K+N D ++ Q+ E++KNEE E
Sbjct: 1125 NEDEEKKKNEEEEKK---KQEEKNKKNEDEEKKKQEEEEKKKNEEEEKKKQEE 1174
Score = 42.0 bits (97), Expect = 0.003
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 8 VNSVDRRGYSVFN----------------------EFSKKVKDETVKNPEFQKSVK---E 42
++ V+R+G +F+ E KK ++E K E +K K E
Sbjct: 1006 LSDVNRKGIQMFDKDPIIVYEDYAYAKLLEERKRREKKKKEEEEKKKKEEEEKKKKEEEE 1065
Query: 43 LKEKAEELKGIKEGLKEKTKQTTEQLYRQFDSVWKEAEAAAKKVSHNVKEKISAATDFST 102
K+K EE K KE ++K K+ E+ ++ + K+ E KK K K D
Sbjct: 1066 KKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMK---NEDEEN 1122
Query: 103 KQNADAKQGSQKSPEEEKNEESPSGNASE 131
K+N D ++ + E++K EE N E
Sbjct: 1123 KKNEDEEKKKNEEEEKKKQEEKNKKNEDE 1151
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 42.0 bits (97), Expect = 0.003
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 20 NEFSKKVKDETVKNPEFQKSVKELKEKAEEL-------KGIKEGLKEKTKQTTEQLYRQF 72
+E +KVK ++ KN E KSVK+ E +EE K K+GLK+K K +E
Sbjct: 159 SEEERKVK-KSKKNKE--KSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDE 215
Query: 73 DSVWKEAEAAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNEE 123
V K + + K V + + A T++ +K S++S E EK++E
Sbjct: 216 KEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDE 266
Score = 38.1 bits (87), Expect = 0.041
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 7/129 (5%)
Query: 3 KTRLFVNSVDRRGYSVFNEFSKKVKDETVKNPEFQKSVKELKEKAEELKGIKEGLKEKTK 62
K R +S D + SKK +T K + S E++EE + +K+ K K K
Sbjct: 120 KKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESS-----EESEEERKVKKSKKNKEK 174
Query: 63 QTTEQLYRQFDSVWKEAEAAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNE 122
++ +S E E +KK +K+K + ++ ++ + K+ +KS + K E
Sbjct: 175 SVKKRAETSEES--DEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKE 232
Query: 123 ESPSGNASE 131
A E
Sbjct: 233 SESEDEAPE 241
Score = 35.8 bits (81), Expect = 0.20
Identities = 30/132 (22%), Positives = 59/132 (43%), Gaps = 11/132 (8%)
Query: 23 SKKVKDETVKNPEFQKSVKEL-KEKAEELKGIKEGLKEKTKQTTEQLYRQFDSVWKEAEA 81
SKK + E +S +E ++K++ K + + KEK+K+ + + +E E
Sbjct: 79 SKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQ 138
Query: 82 AAKKVSHNVKEKISAATDFSTKQNADAKQGSQ----------KSPEEEKNEESPSGNASE 131
+KK S K++ S+ + +++ K+ + ++ EE +E PS + +
Sbjct: 139 KSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKK 198
Query: 132 SLFGKFKSTFSS 143
L K KS S
Sbjct: 199 GLKKKAKSESES 210
>TOLA_HAEIN (P44678) TolA protein
Length = 372
Score = 40.8 bits (94), Expect = 0.006
Identities = 34/142 (23%), Positives = 60/142 (41%), Gaps = 10/142 (7%)
Query: 27 KDETVKNPEFQKSVKELKEKAEE-----LKGIKEGLKEKTKQTTEQLYRQFDSVWKEAEA 81
+ E +K + Q+ +E+K++ E+ L+ K+ + K KQ E + D+ K A
Sbjct: 104 RQEELKRQQEQQRQQEIKKQQEQARQEALEKQKQAEEAKAKQAAEAAKLKADAEAKRLAA 163
Query: 82 AAKKVSHNVKEKISAATDFSTKQNADAK-----QGSQKSPEEEKNEESPSGNASESLFGK 136
AAK+ K K + KQ A+AK + K+ E K + A + K
Sbjct: 164 AAKQAEEEAKAKAAEIAAQKAKQEAEAKAKLEAEAKAKAVAEAKAKAEAEAKAKAAAEAK 223
Query: 137 FKSTFSSPMVSTSFQKLKDAKL 158
K+ + + + +K A L
Sbjct: 224 AKADAEAKAATEAKRKADQASL 245
>DNAK_MYCPE (Q8EUH7) Chaperone protein dnaK (Heat shock protein 70)
(Heat shock 70 kDa protein) (HSP70)
Length = 621
Score = 40.8 bits (94), Expect = 0.006
Identities = 33/112 (29%), Positives = 56/112 (49%), Gaps = 11/112 (9%)
Query: 21 EFSKKVKD-ETVKNPEFQ-KSVKELKEKAEELKGI-------KEGLK--EKTKQTTEQLY 69
E K +K+ E K + Q K +E++ KAE L + +EG K K K+ E++
Sbjct: 510 EIDKMIKEAEENKEKDAQLKEQQEIRYKAESLINMFKTSLNGEEGKKVDAKQKEEAEKMI 569
Query: 70 RQFDSVWKEAEAAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKN 121
+F+++ KE + K N E +++ + KQN + K+ +K EE KN
Sbjct: 570 NEFETLLKEEKWDELKTKINQFEAMASQFAQAAKQNEEKKEEDKKDSEESKN 621
>YDF3_SCHPO (Q10475) Probable eukaryotic initiation factor C17C9.03
Length = 1403
Score = 40.0 bits (92), Expect = 0.011
Identities = 36/145 (24%), Positives = 69/145 (46%), Gaps = 11/145 (7%)
Query: 21 EFSKKVKDETVKNPEFQKSVKELKEKAE---ELKGIKEGLKEKTKQTTEQLYRQFD-SVW 76
E +K+ +E K +K+ +E +EKA+ E K +E ++ ++ E+ R+ + +
Sbjct: 607 EKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAK 666
Query: 77 KEAEAAAKK-VSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNEE----SPSGNASE 131
+EAE AK+ N K + T++NA K + E +KN E +P ++
Sbjct: 667 REAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADKNPEIKSSAPLASSEA 726
Query: 132 SLFGKFKSTFSSPMV--STSFQKLK 154
++ ++ + P V T +KLK
Sbjct: 727 NVDTSKQTNATEPEVVDKTKVEKLK 751
Score = 30.4 bits (67), Expect = 8.6
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 37 QKSVKELKEKAEELKGIKEGLKEKTKQTTEQLYRQFDSVWKEAEAAAKKVSHNVKEKISA 96
+K+ E K KAEE K E + ++ EQ R+ + K A +K +EK
Sbjct: 539 EKAEAEAKRKAEE-KARLEAEENAKREAEEQAKREAEE--KAKREAEEKAKREAEEKAKR 595
Query: 97 ATDFSTKQNADAKQGSQKSPEEEKNEES 124
+ + K+ A+ K +++ EE+ E+
Sbjct: 596 EAEENAKREAEEK--AKREAEEKAKREA 621
>CN1C_MOUSE (Q64338) Calcium/calmodulin-dependent 3',5'-cyclic
nucleotide phosphodiesterase 1C (EC 3.1.4.17) (Cam-PDE
1C)
Length = 654
Score = 39.7 bits (91), Expect = 0.014
Identities = 36/122 (29%), Positives = 55/122 (44%), Gaps = 7/122 (5%)
Query: 32 KNPEFQKSVKELKEKAE---ELKGIKEGLKEKTKQTTEQLYRQFDSVWKEAEAAAKKVSH 88
K P+ +K+ KE +EKA E K + K + +Q T + S +++ +
Sbjct: 524 KVPKEEKAKKEAEEKARLAAEEKQKEMEAKSQAEQGTTSKGEKKTSGEAKSQVNGTRKGD 583
Query: 89 NVKEKISAATDFSTKQ-NADAKQGSQKSPEEEKNEESPSGNASESLFGKFKSTFSSPMVS 147
N + K S KQ N D K G K+ +K + S +GN S+ G K + SP S
Sbjct: 584 NPRGKNSKGEKAGEKQQNGDLKDGKNKA---DKKDHSNTGNESKKTDGTKKRSHGSPAPS 640
Query: 148 TS 149
TS
Sbjct: 641 TS 642
>TAC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing
protein 3 (ERIC-1)
Length = 838
Score = 39.3 bits (90), Expect = 0.018
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 21 EFSKKVKDETVKNPEFQKSVKELKEKAEELKGIKEGLKEKTKQTTEQLYRQFDSVWKEAE 80
++S+K D VK Q+ +EL+ + EEL G L + + E +Y+ + V K+ E
Sbjct: 638 QYSQKDLDAVVKAT--QEENRELRSRCEELHGKNLELGKIMDRFEEVVYQAMEEVQKQKE 695
Query: 81 AAAKKVSHNVKEKISAATDFST--KQNADAKQGSQKSPE----EEKNEES 124
+ ++ +KEK TD ++ K +D + +K E KNEES
Sbjct: 696 LSKAEIQKVLKEKDQLTTDLNSMEKSFSDLFKRFEKQKEVIEGYRKNEES 745
>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor
Length = 678
Score = 39.3 bits (90), Expect = 0.018
Identities = 26/112 (23%), Positives = 59/112 (52%)
Query: 21 EFSKKVKDETVKNPEFQKSVKELKEKAEELKGIKEGLKEKTKQTTEQLYRQFDSVWKEAE 80
E SK+V++E+ + E ++ V+E +E+ EE + +E +E+ ++ E+ + + +E E
Sbjct: 553 EESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDE 612
Query: 81 AAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNEESPSGNASES 132
A++ + +E A + +++ D + + E+E++EE ES
Sbjct: 613 DDAEEDEDDAEEDEDDAEEDDDEEDDDEEDDDEDEDEDEEDEEEEEEEEEES 664
Score = 36.2 bits (82), Expect = 0.16
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 12 DRRGYSVFNEFSKKVKDETVKNPEFQKSVKELKEKAEELKGIKEGLKEKTKQTTEQLYRQ 71
D + + KK + + K + Q+ +++ K+K EE K K+ KE+ KQ ++ ++
Sbjct: 250 DHQQEEMLKTLDKKERKQKEKEMKEQEKIEKKKKKQEE-KEKKKQEKERKKQEKKERKQK 308
Query: 72 FDSVWKEAEAAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNE 122
+ K+ + ++ KEK D K+N + Q ++ EE NE
Sbjct: 309 EKEMKKQKKIEKERKKKEEKEKKKKKHD---KENEETMQQPDQTSEETNNE 356
Score = 30.8 bits (68), Expect = 6.5
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 27 KDETVKNPEFQKSV--KELKEKAEELKGIKEGLKEKTKQTTEQLYRQFDSVWKEAEAAAK 84
K E + E K++ KE K+K +E+K ++ K+K KQ ++ +Q K+ + K
Sbjct: 247 KKEDHQQEEMLKTLDKKERKQKEKEMKEQEKIEKKKKKQEEKEKKKQEKERKKQEKKERK 306
Query: 85 KVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNEESPSGNASES 132
+ +K++ + K+ + K+ + E E+ + P + E+
Sbjct: 307 QKEKEMKKQKKIEKERKKKEEKEKKK-KKHDKENEETMQQPDQTSEET 353
>AZI1_MOUSE (Q62036) 5-azacytidine induced protein 1 (Pre-acrosome
localization protein 1)
Length = 1060
Score = 39.3 bits (90), Expect = 0.018
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 20 NEFSKKVKDETVKN--PEFQKSVKELKEKAEELKGIKEG-LKEKTKQTTEQLYRQFDSVW 76
NE +KK+K+ TV+ PE QK + + K++ L+G+ E L+++ +Q ++ RQ + +
Sbjct: 674 NEKTKKIKEITVRGLEPEIQKLIAKHKQEVRRLRGLHEAELQQREEQAAQRHLRQAEELR 733
Query: 77 KEAEAAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNEE 123
+ + + + +E+ + +Q A + ++ E EE
Sbjct: 734 QHLDREREVLGQQERERAQQRFEQHLEQEQRALEQQRRRLYNEVAEE 780
>LE29_GOSHI (P13940) Late embryogenesis abundant protein D-29 (LEA
D-29)
Length = 302
Score = 38.9 bits (89), Expect = 0.024
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 12 DRRGYSVFNEFSKKVKDETVKNPEFQKSVKELKEKAEELKGIKEGLKEKTKQTTEQLYRQ 71
D R YS +++ DE + Q++ ELK KA+ + K T+Q +
Sbjct: 32 DARDYSKLKTKTEEATDE--HHSRTQQAKDELKSKADHAAN-------EVKSNTQQAKDR 82
Query: 72 FDSVWKEAEAAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNEESPSGNASE 131
V KEA+ + + KEKIS F KQ+ D K +K+ + + + + + +
Sbjct: 83 ASEVGKEAKEYTESWTEWAKEKISEGLGF--KQDDDPKGSVEKAFDSVADTATKTKDKLQ 140
Query: 132 SL---FGKFKSTFSSPMVSTSFQKLKDAK 157
+ G++ + + M T+++K D K
Sbjct: 141 DMASGAGEYSAGKAKDMKDTAYKKTDDVK 169
>CYL2_HUMAN (Q14093) Cylicin II (Multiple-band polypeptide II)
Length = 348
Score = 38.9 bits (89), Expect = 0.024
Identities = 31/107 (28%), Positives = 58/107 (53%), Gaps = 8/107 (7%)
Query: 26 VKDETVKNPEFQKSVK---ELKEKAEELKGIKEGLKEKTKQTTEQLYRQFD---SVWKEA 79
VK + K+ + +K E K+ ++ K IK+G K+K K ++ + D K+A
Sbjct: 237 VKADEKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKKPSSTDSDSKDDVKKESKKDA 296
Query: 80 EAAAKKVSHNVKEKISAATDFSTKQNA--DAKQGSQKSPEEEKNEES 124
AKKV+ EK SA + K+NA DAK+ ++K+ ++++ +++
Sbjct: 297 TKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAKKDEKKDA 343
>CN1C_RAT (Q63421) Calcium/calmodulin-dependent 3',5'-cyclic
nucleotide phosphodiesterase 1C (EC 3.1.4.17) (Cam-PDE
1C)
Length = 768
Score = 38.9 bits (89), Expect = 0.024
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 32 KNPEFQKSVKELKEKA----EELKGIKEGLKEKTKQTTEQLYRQFDSVWK-EAEAAAKKV 86
K P+ +K+ KE +EKA EE + E + + TT + ++ K +
Sbjct: 584 KVPKEEKAKKEAEEKARLAAEEKQKEMEAKSQAEQGTTSKAEKKTSGETKGQVNGTRTSK 643
Query: 87 SHNVKEKISAATDFSTKQ-NADAKQGSQKSPEEEKNEESPSGNASESLFGKFKSTFSSPM 145
N + K S KQ N D K G K+ +K + S +GN S+ G K + SP
Sbjct: 644 GDNPRGKNSKGDKAGEKQQNGDLKDGKNKA---DKKDHSNTGNESKKADGTKKRSHGSPA 700
Query: 146 VSTS 149
STS
Sbjct: 701 PSTS 704
>YTA4_BACAN (Q9RN27) Hypothetical protein
pXO2-05/BXB0004/GBAA_pXO2_0004
Length = 282
Score = 38.5 bits (88), Expect = 0.031
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 19 FNEFSKKVKDETVKNPEFQKSVKELKEKA------EELKGIKEGLKEKTKQTTEQLYRQF 72
F S VK E + +PE Q V +LKE++ E K I LK+K+K E+ Y F
Sbjct: 137 FGVVSSVVKPEYI-HPELQNDVDDLKERSMKMYVLENEKLINRELKKKSKDFYEREYLAF 195
Query: 73 DSVWKEAEAAAKKVSHNVKEKISAATDFSTKQNADAKQGSQKSPEEEKNEESPSGNASES 132
+A K++ +++K SA K N + + E EK + + N++ES
Sbjct: 196 SQ-----QALRKEIEKKMEDKSSAMKQLKIK-NEQLTKEMEYQTEGEKVKTKNTINSNES 249
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.136 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,727,329
Number of Sequences: 164201
Number of extensions: 1921531
Number of successful extensions: 10561
Number of sequences better than 10.0: 347
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 303
Number of HSP's that attempted gapping in prelim test: 9766
Number of HSP's gapped (non-prelim): 903
length of query: 409
length of database: 59,974,054
effective HSP length: 113
effective length of query: 296
effective length of database: 41,419,341
effective search space: 12260124936
effective search space used: 12260124936
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Medicago: description of AC141322.10