BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140916.1 - phase: 0
(108 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ARR8_ARATH (O80365) Two-component response regulator ARR8 (Respo... 72 2e-13
ARR3_ARATH (Q9ZWS9) Two-component response regulator ARR3 68 4e-12
ARR9_ARATH (O80366) Two-component response regulator ARR9 (Respo... 67 1e-11
ARR6_ARATH (Q9ZWS6) Two-component response regulator ARR6 66 1e-11
ARR4_ARATH (O82798) Two-component response regulator ARR4 (Respo... 66 2e-11
ARR7_ARATH (Q9ZWS7) Two-component response regulator ARR7 65 3e-11
ARR5_ARATH (Q9SB04) Two-component response regulator ARR5 (Respo... 64 5e-11
ARRF_ARATH (Q7G8V2) Two-component response regulator ARR15 64 6e-11
ARRH_ARATH (Q9FPR6) Two-component response regulator ARR17 62 2e-10
ARRG_ARATH (Q9SHC2) Two-component response regulator ARR16 57 1e-08
ETR2_LYCES (O49187) Ethylene receptor 2 (EC 2.7.3.-) (LeETR2) 38 0.005
ETR1_TOBAC (O48929) Ethylene receptor (EC 2.7.3.-) (NT-ETR1) 35 0.024
ETR1_BRAOL (O49230) Ethylene receptor (EC 2.7.3.-) 33 0.091
S24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-rela... 32 0.20
CARA_PASMU (Q9CKV3) Carbamoyl-phosphate synthase small chain (EC... 32 0.20
RPFC_XANCP (P49246) Sensory/regulatory protein rpfC (EC 2.7.3.-) 32 0.35
ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.3.-) (PhETR1) 32 0.35
CARA_YERPE (Q8ZIL5) Carbamoyl-phosphate synthase small chain (EC... 32 0.35
MINC_SYNY3 (Q55901) Probable septum site-determining protein minC 31 0.45
7LES_DROVI (P20806) Sevenless protein (EC 2.7.1.112) 31 0.45
>ARR8_ARATH (O80365) Two-component response regulator ARR8
(Response reactor 3)
Length = 225
Score = 72.0 bits (175), Expect = 2e-13
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 19 QEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILES 78
+ FHVLAVDDS+ DR ++ERLL+ SSC+VT VDSG KAL++LGL +D+ S
Sbjct: 6 ESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNAL----S 61
Query: 79 SSPSLPQPLQLQEVI 93
+SP + Q +++ +I
Sbjct: 62 TSPQIHQEVEINLII 76
>ARR3_ARATH (Q9ZWS9) Two-component response regulator ARR3
Length = 231
Score = 67.8 bits (164), Expect = 4e-12
Identities = 32/57 (56%), Positives = 46/57 (80%)
Query: 11 QLQPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDE 67
+L+ L + HVLAVDDS++DR+++ERLLR +SCKVT VDSG +AL++LGL+ D+
Sbjct: 22 ELESPPLDSDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDK 78
>ARR9_ARATH (O80366) Two-component response regulator ARR9
(Response reactor 4)
Length = 234
Score = 66.6 bits (161), Expect = 1e-11
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 19 QEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILES 78
+ FHVLAVDDS+ DR L+ERLL+ SSC+VT VDSG KAL++LGL S+ ++ S
Sbjct: 6 ESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAF--S 63
Query: 79 SSPSLPQPLQLQEVI 93
+P Q +++ +I
Sbjct: 64 KAPVNHQVVEVNLII 78
>ARR6_ARATH (Q9ZWS6) Two-component response regulator ARR6
Length = 186
Score = 66.2 bits (160), Expect = 1e-11
Identities = 35/65 (53%), Positives = 47/65 (71%), Gaps = 3/65 (4%)
Query: 8 RKLQLQPQNLK---QEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLN 64
RK+++ + K + HVLAVDDS +DR +ERLLR SSCKVT VDS +AL+YLGL+
Sbjct: 8 RKMEILNHSSKFGSPDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLD 67
Query: 65 IDEIS 69
++E S
Sbjct: 68 VEEKS 72
>ARR4_ARATH (O82798) Two-component response regulator ARR4
(Response regulator 1)
Length = 259
Score = 65.9 bits (159), Expect = 2e-11
Identities = 34/67 (50%), Positives = 50/67 (73%), Gaps = 7/67 (10%)
Query: 4 GLDSRKLQLQPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGL 63
G++S L L + HVLAVDDS++DR+++ERLLR +SCKVT VDSG +AL++LGL
Sbjct: 23 GIESAPLDL-------DEVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGL 75
Query: 64 NIDEISS 70
+ ++ S+
Sbjct: 76 DNEKASA 82
>ARR7_ARATH (Q9ZWS7) Two-component response regulator ARR7
Length = 206
Score = 65.1 bits (157), Expect = 3e-11
Identities = 30/42 (71%), Positives = 38/42 (90%)
Query: 23 HVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLN 64
HVLAVDDS++DR ++ERLLR SSCKVT V+SG +AL+YLGL+
Sbjct: 25 HVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLD 66
>ARR5_ARATH (Q9SB04) Two-component response regulator ARR5
(Response reactor 2)
Length = 184
Score = 64.3 bits (155), Expect = 5e-11
Identities = 32/48 (66%), Positives = 39/48 (80%)
Query: 23 HVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISS 70
HVLAVDDS++DR +ERLLR SSCKVT VDS +AL+YLGL+ + SS
Sbjct: 26 HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSS 73
>ARRF_ARATH (Q7G8V2) Two-component response regulator ARR15
Length = 206
Score = 63.9 bits (154), Expect = 6e-11
Identities = 33/63 (52%), Positives = 43/63 (67%)
Query: 8 RKLQLQPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDE 67
R L + HVLAVDDS +DR ++ERLL+ S+CKVT V+SG +AL+YLGL+ D
Sbjct: 4 RDLSSSLSSSSSPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDN 63
Query: 68 ISS 70
SS
Sbjct: 64 GSS 66
>ARRH_ARATH (Q9FPR6) Two-component response regulator ARR17
Length = 153
Score = 62.0 bits (149), Expect = 2e-10
Identities = 28/59 (47%), Positives = 46/59 (77%)
Query: 19 QEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILE 77
+E HVLAVDD++IDR L+ER+L+ SSCKVT ++G +AL+YLGL + + + +++++
Sbjct: 17 EEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMK 75
>ARRG_ARATH (Q9SHC2) Two-component response regulator ARR16
Length = 164
Score = 56.6 bits (135), Expect = 1e-08
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 20 EHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGL 63
E HVLAVDD++IDR L+ERLL+ S CKVT ++ +AL+YLGL
Sbjct: 27 EELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGL 70
>ETR2_LYCES (O49187) Ethylene receptor 2 (EC 2.7.3.-) (LeETR2)
Length = 736
Score = 37.7 bits (86), Expect = 0.005
Identities = 22/58 (37%), Positives = 32/58 (54%), Gaps = 5/58 (8%)
Query: 4 GLDSRKLQLQPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYL 61
GL + +Q+ Q LK VL +DD+ RM+ + LL C VT + SGD+ L+ L
Sbjct: 599 GLPANHMQMTFQGLK-----VLVMDDNGFSRMVTKSLLVHLGCDVTTIGSGDECLRIL 651
>ETR1_TOBAC (O48929) Ethylene receptor (EC 2.7.3.-) (NT-ETR1)
Length = 738
Score = 35.4 bits (80), Expect = 0.024
Identities = 22/57 (38%), Positives = 31/57 (53%), Gaps = 5/57 (8%)
Query: 5 LDSRKLQLQPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYL 61
L + +Q+ Q LK VL +DD+ RM+ + LL C VT V SGD+ L+ L
Sbjct: 600 LPANHMQMTFQGLK-----VLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLRVL 651
>ETR1_BRAOL (O49230) Ethylene receptor (EC 2.7.3.-)
Length = 735
Score = 33.5 bits (75), Expect = 0.091
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 9 KLQLQPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALK 59
K+ PQ++ VL +D++ + RM+ + LL C+VT V S ++ L+
Sbjct: 595 KVPANPQHVNFAGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLR 645
>S24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related
protein A) (Fragment)
Length = 1078
Score = 32.3 bits (72), Expect = 0.20
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 36 LLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILESSSPSLPQPLQLQEVIIL 95
LL + D S + D+ D + + ID +S+ +SS+L + P L P L+ +
Sbjct: 831 LLANMAVDRSMTASLSDARDALVNAV---IDSLSAYRSSVLSNQQPGLMVPFSLRLFPLF 887
Query: 96 IFFFLILKSFQ 106
+ L KSFQ
Sbjct: 888 VLALLKQKSFQ 898
>CARA_PASMU (Q9CKV3) Carbamoyl-phosphate synthase small chain (EC
6.3.5.5) (Carbamoyl-phosphate synthetase glutamine
chain)
Length = 385
Score = 32.3 bits (72), Expect = 0.20
Identities = 23/68 (33%), Positives = 33/68 (47%), Gaps = 9/68 (13%)
Query: 19 QEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTKSSILES 78
Q F+V+A D V +L R+L + CK+T V + A + L LN D I S
Sbjct: 185 QAEFNVVAYDFGVKHNIL--RMLAERGCKITVVPAKTSAEQVLALNPD-------GIFLS 235
Query: 79 SSPSLPQP 86
+ P P+P
Sbjct: 236 NGPGDPEP 243
>RPFC_XANCP (P49246) Sensory/regulatory protein rpfC (EC 2.7.3.-)
Length = 677
Score = 31.6 bits (70), Expect = 0.35
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 24 VLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKAL 58
+L DD +RM+L+RLL + KV CV+ ++ L
Sbjct: 415 MLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVL 449
>ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.3.-) (PhETR1)
Length = 740
Score = 31.6 bits (70), Expect = 0.35
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 4 GLDSRKLQLQPQ---NLKQEHF---HVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKA 57
G + KL L P+ N Q F VL +D++ I RM+ + LL C VT V S ++
Sbjct: 590 GSNEPKLPLMPKVSANNSQTDFPGLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSSEEC 649
Query: 58 LK 59
L+
Sbjct: 650 LR 651
>CARA_YERPE (Q8ZIL5) Carbamoyl-phosphate synthase small chain (EC
6.3.5.5) (Carbamoyl-phosphate synthetase glutamine
chain)
Length = 391
Score = 31.6 bits (70), Expect = 0.35
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 13 QPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTK 72
QP++L FHV+A D V +L R+L D C++T V + A L LN D
Sbjct: 186 QPEDLP---FHVVAYDYGVKRNIL--RMLVDRGCRLTVVPAQTPAEDVLKLNPD------ 234
Query: 73 SSILESSSPSLPQP 86
I S+ P P+P
Sbjct: 235 -GIFLSNGPGDPEP 247
>MINC_SYNY3 (Q55901) Probable septum site-determining protein minC
Length = 247
Score = 31.2 bits (69), Expect = 0.45
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 25 LAVDDSVIDRMLLERL---LRDSSCKVTCVDSGDK----ALKYLGLNIDEISSTKSSILE 77
LAV++ ++D L+ + L++ + + V++ + A GL++D+ + K +
Sbjct: 67 LAVNNQLLDARQLQAIAAGLKEQNLTLQWVETNRRQTAVAAASAGLSVDQTMADKPLVDP 126
Query: 78 SSSPSLPQPLQLQEVI 93
S +PSLP+PL ++ +
Sbjct: 127 SETPSLPKPLVVRHTL 142
>7LES_DROVI (P20806) Sevenless protein (EC 2.7.1.112)
Length = 2594
Score = 31.2 bits (69), Expect = 0.45
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 11 QLQPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISS 70
Q Q Q +QE A D ++ +R++LER+ RD C C+ D L G+ ++ +
Sbjct: 235 QRQQQQQQQEAAAAAAADAAIDERIVLERVTRD--CVQRCIVEEDLFLDEFGIKCEKADN 292
Query: 71 T 71
+
Sbjct: 293 S 293
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.139 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,233,242
Number of Sequences: 164201
Number of extensions: 387292
Number of successful extensions: 1453
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1418
Number of HSP's gapped (non-prelim): 67
length of query: 108
length of database: 59,974,054
effective HSP length: 84
effective length of query: 24
effective length of database: 46,181,170
effective search space: 1108348080
effective search space used: 1108348080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC140916.1